Multiple sequence alignment - TraesCS4B01G298000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G298000 chr4B 100.000 3908 0 0 1 3908 583334291 583338198 0.000000e+00 7217.0
1 TraesCS4B01G298000 chr4B 93.750 64 2 2 161 224 358188443 358188504 1.160000e-15 95.3
2 TraesCS4B01G298000 chr4B 97.727 44 1 0 161 204 221000696 221000739 4.190000e-10 76.8
3 TraesCS4B01G298000 chr4D 94.066 2511 122 8 785 3270 465969159 465971667 0.000000e+00 3786.0
4 TraesCS4B01G298000 chr4D 93.115 610 28 9 3302 3908 465971669 465972267 0.000000e+00 881.0
5 TraesCS4B01G298000 chr4D 84.756 164 18 7 2 162 481421767 481421926 1.450000e-34 158.0
6 TraesCS4B01G298000 chr4A 93.362 2591 120 17 784 3328 4621434 4618850 0.000000e+00 3784.0
7 TraesCS4B01G298000 chr4A 90.625 320 21 5 3471 3787 4618605 4618292 2.170000e-112 416.0
8 TraesCS4B01G298000 chr4A 88.489 139 12 2 3773 3908 4601350 4601213 8.690000e-37 165.0
9 TraesCS4B01G298000 chr4A 95.745 47 2 0 158 204 665451078 665451124 4.190000e-10 76.8
10 TraesCS4B01G298000 chr2A 88.286 350 35 5 218 567 473185189 473184846 7.810000e-112 414.0
11 TraesCS4B01G298000 chr2A 87.216 352 39 6 218 566 643022880 643023228 2.830000e-106 396.0
12 TraesCS4B01G298000 chr2A 88.060 335 36 2 218 550 764192274 764191942 1.020000e-105 394.0
13 TraesCS4B01G298000 chr2A 82.857 140 18 4 16 154 198858079 198857945 1.910000e-23 121.0
14 TraesCS4B01G298000 chr3D 87.500 352 38 5 219 566 367463290 367462941 6.080000e-108 401.0
15 TraesCS4B01G298000 chr3D 80.682 88 14 3 77 162 596271061 596271147 9.060000e-07 65.8
16 TraesCS4B01G298000 chr5D 87.216 352 42 3 218 568 37121112 37120763 7.870000e-107 398.0
17 TraesCS4B01G298000 chr7A 87.042 355 37 8 221 566 1927030 1926676 3.660000e-105 392.0
18 TraesCS4B01G298000 chr7A 94.000 50 3 0 161 210 333024813 333024764 4.190000e-10 76.8
19 TraesCS4B01G298000 chr2B 86.895 351 41 4 219 566 45556231 45556579 4.740000e-104 388.0
20 TraesCS4B01G298000 chr2B 95.000 60 3 0 161 220 393857216 393857157 1.160000e-15 95.3
21 TraesCS4B01G298000 chr2B 97.727 44 1 0 161 204 69158180 69158223 4.190000e-10 76.8
22 TraesCS4B01G298000 chr7B 86.857 350 41 4 218 566 424544171 424543826 1.700000e-103 387.0
23 TraesCS4B01G298000 chr7B 97.727 44 1 0 161 204 100960564 100960607 4.190000e-10 76.8
24 TraesCS4B01G298000 chr1B 86.364 352 43 5 218 566 661148805 661148456 2.850000e-101 379.0
25 TraesCS4B01G298000 chr5A 84.568 162 24 1 1 162 561176614 561176774 4.040000e-35 159.0
26 TraesCS4B01G298000 chr5A 86.111 144 17 3 1 144 511367629 511367769 6.760000e-33 152.0
27 TraesCS4B01G298000 chr6B 84.049 163 22 3 1 162 266270 266111 1.880000e-33 154.0
28 TraesCS4B01G298000 chr6B 96.000 50 2 0 161 210 470172220 470172171 9.000000e-12 82.4
29 TraesCS4B01G298000 chr6B 92.157 51 4 0 160 210 676296622 676296572 5.420000e-09 73.1
30 TraesCS4B01G298000 chr5B 79.333 150 27 2 14 162 477955742 477955888 6.910000e-18 102.0
31 TraesCS4B01G298000 chr7D 84.444 90 11 2 1 90 596308098 596308184 6.960000e-13 86.1
32 TraesCS4B01G298000 chrUn 91.304 46 4 0 117 162 101892493 101892448 3.260000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G298000 chr4B 583334291 583338198 3907 False 7217.0 7217 100.0000 1 3908 1 chr4B.!!$F3 3907
1 TraesCS4B01G298000 chr4D 465969159 465972267 3108 False 2333.5 3786 93.5905 785 3908 2 chr4D.!!$F2 3123
2 TraesCS4B01G298000 chr4A 4618292 4621434 3142 True 2100.0 3784 91.9935 784 3787 2 chr4A.!!$R2 3003

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
303 304 0.258484 AATTGCCATGGTGGATCGGA 59.742 50.0 14.67 0.0 40.96 4.55 F
1725 1766 0.105760 TGGATTGCCCGCCCAATATT 60.106 50.0 0.00 0.0 35.67 1.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1779 1820 0.674895 GCGAAAGGGTCTCATGCACT 60.675 55.0 0.00 0.0 0.00 4.40 R
3217 3265 0.104855 GGCGGTCACTGCATCAGATA 59.895 55.0 11.68 0.0 35.18 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.874205 AGAATTGTCTGTTGATTCAAAAGAAAA 57.126 25.926 19.89 19.89 39.13 2.29
29 30 9.906111 GAATTGTCTGTTGATTCAAAAGAAAAC 57.094 29.630 19.97 10.75 37.64 2.43
30 31 9.434420 AATTGTCTGTTGATTCAAAAGAAAACA 57.566 25.926 19.97 12.77 37.64 2.83
31 32 7.810766 TGTCTGTTGATTCAAAAGAAAACAC 57.189 32.000 18.73 9.00 39.13 3.32
32 33 7.601856 TGTCTGTTGATTCAAAAGAAAACACT 58.398 30.769 18.73 0.00 39.13 3.55
33 34 8.087750 TGTCTGTTGATTCAAAAGAAAACACTT 58.912 29.630 18.73 0.00 39.13 3.16
34 35 8.375465 GTCTGTTGATTCAAAAGAAAACACTTG 58.625 33.333 18.73 0.00 39.13 3.16
35 36 8.303156 TCTGTTGATTCAAAAGAAAACACTTGA 58.697 29.630 15.50 0.00 35.10 3.02
36 37 8.824159 TGTTGATTCAAAAGAAAACACTTGAA 57.176 26.923 0.00 0.00 40.85 2.69
37 38 9.265901 TGTTGATTCAAAAGAAAACACTTGAAA 57.734 25.926 0.00 0.00 40.21 2.69
40 41 8.716909 TGATTCAAAAGAAAACACTTGAAAACC 58.283 29.630 0.70 0.00 40.21 3.27
41 42 6.698359 TCAAAAGAAAACACTTGAAAACCG 57.302 33.333 0.00 0.00 0.00 4.44
42 43 6.217294 TCAAAAGAAAACACTTGAAAACCGT 58.783 32.000 0.00 0.00 0.00 4.83
43 44 6.702282 TCAAAAGAAAACACTTGAAAACCGTT 59.298 30.769 0.00 0.00 0.00 4.44
44 45 6.699895 AAAGAAAACACTTGAAAACCGTTC 57.300 33.333 0.00 0.00 0.00 3.95
45 46 4.408694 AGAAAACACTTGAAAACCGTTCG 58.591 39.130 0.00 0.00 0.00 3.95
46 47 2.182904 AACACTTGAAAACCGTTCGC 57.817 45.000 0.00 0.00 0.00 4.70
47 48 1.088306 ACACTTGAAAACCGTTCGCA 58.912 45.000 0.00 0.00 0.00 5.10
48 49 1.469308 ACACTTGAAAACCGTTCGCAA 59.531 42.857 0.00 0.00 0.00 4.85
49 50 2.098443 ACACTTGAAAACCGTTCGCAAT 59.902 40.909 0.80 0.00 0.00 3.56
50 51 3.312973 ACACTTGAAAACCGTTCGCAATA 59.687 39.130 0.80 0.00 0.00 1.90
51 52 4.023536 ACACTTGAAAACCGTTCGCAATAT 60.024 37.500 0.80 0.00 0.00 1.28
52 53 5.179742 ACACTTGAAAACCGTTCGCAATATA 59.820 36.000 0.80 0.00 0.00 0.86
53 54 6.081049 CACTTGAAAACCGTTCGCAATATAA 58.919 36.000 0.80 0.00 0.00 0.98
54 55 6.579292 CACTTGAAAACCGTTCGCAATATAAA 59.421 34.615 0.80 0.00 0.00 1.40
55 56 7.113684 CACTTGAAAACCGTTCGCAATATAAAA 59.886 33.333 0.80 0.00 0.00 1.52
56 57 7.648510 ACTTGAAAACCGTTCGCAATATAAAAA 59.351 29.630 0.80 0.00 0.00 1.94
110 111 9.439500 TTGTAACTACTAAAAAGTGTTCACAGT 57.561 29.630 5.74 2.62 0.00 3.55
111 112 9.439500 TGTAACTACTAAAAAGTGTTCACAGTT 57.561 29.630 5.74 6.13 40.96 3.16
114 115 7.758495 ACTACTAAAAAGTGTTCACAGTTTGG 58.242 34.615 12.48 9.73 45.71 3.28
115 116 6.827586 ACTAAAAAGTGTTCACAGTTTGGA 57.172 33.333 12.48 4.49 45.71 3.53
116 117 7.222000 ACTAAAAAGTGTTCACAGTTTGGAA 57.778 32.000 12.48 2.66 45.71 3.53
117 118 7.662897 ACTAAAAAGTGTTCACAGTTTGGAAA 58.337 30.769 12.48 0.68 45.71 3.13
118 119 8.145122 ACTAAAAAGTGTTCACAGTTTGGAAAA 58.855 29.630 12.48 0.00 45.71 2.29
119 120 7.793927 AAAAAGTGTTCACAGTTTGGAAAAA 57.206 28.000 12.48 0.00 45.71 1.94
120 121 7.977789 AAAAGTGTTCACAGTTTGGAAAAAT 57.022 28.000 12.48 0.00 45.71 1.82
121 122 6.966435 AAGTGTTCACAGTTTGGAAAAATG 57.034 33.333 5.74 0.00 36.15 2.32
122 123 6.036577 AGTGTTCACAGTTTGGAAAAATGT 57.963 33.333 5.74 0.35 0.00 2.71
123 124 6.463360 AGTGTTCACAGTTTGGAAAAATGTT 58.537 32.000 3.30 0.00 0.00 2.71
124 125 6.589907 AGTGTTCACAGTTTGGAAAAATGTTC 59.410 34.615 3.30 0.02 0.00 3.18
125 126 5.872070 TGTTCACAGTTTGGAAAAATGTTCC 59.128 36.000 3.30 0.00 39.03 3.62
126 127 5.017294 TCACAGTTTGGAAAAATGTTCCC 57.983 39.130 0.00 0.00 37.79 3.97
127 128 4.467795 TCACAGTTTGGAAAAATGTTCCCA 59.532 37.500 0.00 0.00 37.79 4.37
128 129 5.046304 TCACAGTTTGGAAAAATGTTCCCAA 60.046 36.000 0.00 0.00 37.79 4.12
129 130 5.645497 CACAGTTTGGAAAAATGTTCCCAAA 59.355 36.000 0.00 0.00 43.85 3.28
130 131 6.318396 CACAGTTTGGAAAAATGTTCCCAAAT 59.682 34.615 1.95 0.00 46.41 2.32
131 132 6.889177 ACAGTTTGGAAAAATGTTCCCAAATT 59.111 30.769 1.95 0.00 46.41 1.82
132 133 7.395772 ACAGTTTGGAAAAATGTTCCCAAATTT 59.604 29.630 1.95 0.00 46.41 1.82
133 134 7.701501 CAGTTTGGAAAAATGTTCCCAAATTTG 59.298 33.333 11.40 11.40 46.41 2.32
134 135 7.395772 AGTTTGGAAAAATGTTCCCAAATTTGT 59.604 29.630 16.73 0.00 46.41 2.83
135 136 8.678199 GTTTGGAAAAATGTTCCCAAATTTGTA 58.322 29.630 16.73 2.09 46.41 2.41
136 137 8.807948 TTGGAAAAATGTTCCCAAATTTGTAA 57.192 26.923 16.73 8.07 37.79 2.41
137 138 8.807948 TGGAAAAATGTTCCCAAATTTGTAAA 57.192 26.923 16.73 7.74 37.79 2.01
138 139 9.243105 TGGAAAAATGTTCCCAAATTTGTAAAA 57.757 25.926 16.73 6.63 37.79 1.52
145 146 8.792830 TGTTCCCAAATTTGTAAAAATGTTGA 57.207 26.923 16.73 0.00 0.00 3.18
146 147 9.231297 TGTTCCCAAATTTGTAAAAATGTTGAA 57.769 25.926 16.73 2.41 0.00 2.69
147 148 9.715123 GTTCCCAAATTTGTAAAAATGTTGAAG 57.285 29.630 16.73 0.00 0.00 3.02
148 149 9.672673 TTCCCAAATTTGTAAAAATGTTGAAGA 57.327 25.926 16.73 7.60 0.00 2.87
149 150 9.672673 TCCCAAATTTGTAAAAATGTTGAAGAA 57.327 25.926 16.73 0.00 0.00 2.52
164 165 9.606631 AATGTTGAAGAATGATAGAAGGTACTC 57.393 33.333 0.00 0.00 38.49 2.59
165 166 7.556844 TGTTGAAGAATGATAGAAGGTACTCC 58.443 38.462 0.00 0.00 38.49 3.85
166 167 6.732896 TGAAGAATGATAGAAGGTACTCCC 57.267 41.667 0.00 0.00 38.49 4.30
168 169 6.551601 TGAAGAATGATAGAAGGTACTCCCTC 59.448 42.308 0.00 0.00 45.47 4.30
169 170 5.399113 AGAATGATAGAAGGTACTCCCTCC 58.601 45.833 0.00 0.00 45.47 4.30
170 171 4.834406 ATGATAGAAGGTACTCCCTCCA 57.166 45.455 0.00 0.00 45.47 3.86
171 172 4.834406 TGATAGAAGGTACTCCCTCCAT 57.166 45.455 0.00 0.00 45.47 3.41
172 173 5.157770 TGATAGAAGGTACTCCCTCCATT 57.842 43.478 0.00 0.00 45.47 3.16
173 174 5.148502 TGATAGAAGGTACTCCCTCCATTC 58.851 45.833 0.00 0.00 45.47 2.67
174 175 3.786213 AGAAGGTACTCCCTCCATTCT 57.214 47.619 0.00 0.00 45.47 2.40
175 176 3.379452 AGAAGGTACTCCCTCCATTCTG 58.621 50.000 0.00 0.00 45.47 3.02
176 177 3.012959 AGAAGGTACTCCCTCCATTCTGA 59.987 47.826 0.00 0.00 45.47 3.27
177 178 3.715648 AGGTACTCCCTCCATTCTGAT 57.284 47.619 0.00 0.00 40.71 2.90
178 179 4.014273 AGGTACTCCCTCCATTCTGATT 57.986 45.455 0.00 0.00 40.71 2.57
179 180 4.375313 AGGTACTCCCTCCATTCTGATTT 58.625 43.478 0.00 0.00 40.71 2.17
180 181 5.538877 AGGTACTCCCTCCATTCTGATTTA 58.461 41.667 0.00 0.00 40.71 1.40
181 182 5.367060 AGGTACTCCCTCCATTCTGATTTAC 59.633 44.000 0.00 0.00 40.71 2.01
182 183 5.367060 GGTACTCCCTCCATTCTGATTTACT 59.633 44.000 0.00 0.00 0.00 2.24
183 184 5.622346 ACTCCCTCCATTCTGATTTACTC 57.378 43.478 0.00 0.00 0.00 2.59
184 185 4.100189 ACTCCCTCCATTCTGATTTACTCG 59.900 45.833 0.00 0.00 0.00 4.18
185 186 4.030913 TCCCTCCATTCTGATTTACTCGT 58.969 43.478 0.00 0.00 0.00 4.18
186 187 4.099573 TCCCTCCATTCTGATTTACTCGTC 59.900 45.833 0.00 0.00 0.00 4.20
187 188 4.045104 CCTCCATTCTGATTTACTCGTCG 58.955 47.826 0.00 0.00 0.00 5.12
188 189 4.440250 CCTCCATTCTGATTTACTCGTCGT 60.440 45.833 0.00 0.00 0.00 4.34
189 190 4.421058 TCCATTCTGATTTACTCGTCGTG 58.579 43.478 0.00 0.00 0.00 4.35
190 191 4.157105 TCCATTCTGATTTACTCGTCGTGA 59.843 41.667 0.56 0.00 0.00 4.35
191 192 5.043903 CCATTCTGATTTACTCGTCGTGAT 58.956 41.667 0.56 0.00 0.00 3.06
192 193 5.520288 CCATTCTGATTTACTCGTCGTGATT 59.480 40.000 0.56 0.00 0.00 2.57
193 194 6.036083 CCATTCTGATTTACTCGTCGTGATTT 59.964 38.462 0.56 0.00 0.00 2.17
194 195 7.413000 CCATTCTGATTTACTCGTCGTGATTTT 60.413 37.037 0.56 0.00 0.00 1.82
195 196 8.592155 CATTCTGATTTACTCGTCGTGATTTTA 58.408 33.333 0.56 0.00 0.00 1.52
196 197 7.736031 TCTGATTTACTCGTCGTGATTTTAG 57.264 36.000 0.56 0.00 0.00 1.85
197 198 7.310664 TCTGATTTACTCGTCGTGATTTTAGT 58.689 34.615 0.56 0.00 0.00 2.24
198 199 7.811236 TCTGATTTACTCGTCGTGATTTTAGTT 59.189 33.333 0.56 0.00 0.00 2.24
199 200 7.946043 TGATTTACTCGTCGTGATTTTAGTTC 58.054 34.615 0.56 0.00 0.00 3.01
200 201 7.595875 TGATTTACTCGTCGTGATTTTAGTTCA 59.404 33.333 0.56 0.00 0.00 3.18
201 202 7.697352 TTTACTCGTCGTGATTTTAGTTCAA 57.303 32.000 0.56 0.00 0.00 2.69
202 203 7.697352 TTACTCGTCGTGATTTTAGTTCAAA 57.303 32.000 0.56 0.00 0.00 2.69
203 204 6.780706 ACTCGTCGTGATTTTAGTTCAAAT 57.219 33.333 0.56 0.00 0.00 2.32
204 205 6.818416 ACTCGTCGTGATTTTAGTTCAAATC 58.182 36.000 0.56 0.11 41.68 2.17
205 206 5.839188 TCGTCGTGATTTTAGTTCAAATCG 58.161 37.500 0.00 0.00 43.47 3.34
206 207 5.013236 CGTCGTGATTTTAGTTCAAATCGG 58.987 41.667 2.58 0.00 43.47 4.18
207 208 5.164031 CGTCGTGATTTTAGTTCAAATCGGA 60.164 40.000 2.58 0.58 43.47 4.55
208 209 6.595794 GTCGTGATTTTAGTTCAAATCGGAA 58.404 36.000 2.58 0.00 43.47 4.30
209 210 6.518736 GTCGTGATTTTAGTTCAAATCGGAAC 59.481 38.462 0.00 0.00 43.47 3.62
225 226 2.664015 GGAACGGAGGGAGTATGTAGT 58.336 52.381 0.00 0.00 0.00 2.73
226 227 3.029570 GGAACGGAGGGAGTATGTAGTT 58.970 50.000 0.00 0.00 0.00 2.24
227 228 4.210331 GGAACGGAGGGAGTATGTAGTTA 58.790 47.826 0.00 0.00 0.00 2.24
228 229 4.646492 GGAACGGAGGGAGTATGTAGTTAA 59.354 45.833 0.00 0.00 0.00 2.01
229 230 5.127682 GGAACGGAGGGAGTATGTAGTTAAA 59.872 44.000 0.00 0.00 0.00 1.52
230 231 6.351286 GGAACGGAGGGAGTATGTAGTTAAAA 60.351 42.308 0.00 0.00 0.00 1.52
231 232 6.610075 ACGGAGGGAGTATGTAGTTAAAAA 57.390 37.500 0.00 0.00 0.00 1.94
232 233 7.191593 ACGGAGGGAGTATGTAGTTAAAAAT 57.808 36.000 0.00 0.00 0.00 1.82
233 234 7.627311 ACGGAGGGAGTATGTAGTTAAAAATT 58.373 34.615 0.00 0.00 0.00 1.82
234 235 8.761689 ACGGAGGGAGTATGTAGTTAAAAATTA 58.238 33.333 0.00 0.00 0.00 1.40
235 236 9.603921 CGGAGGGAGTATGTAGTTAAAAATTAA 57.396 33.333 0.00 0.00 0.00 1.40
255 256 9.899226 AAATTAATGCTTCTAAGTCTTTGTGAC 57.101 29.630 0.00 0.00 45.67 3.67
269 270 7.715265 GTCTTTGTGACTATATACCCACATG 57.285 40.000 11.21 0.00 42.21 3.21
270 271 7.497595 GTCTTTGTGACTATATACCCACATGA 58.502 38.462 0.00 10.19 42.21 3.07
271 272 7.985184 GTCTTTGTGACTATATACCCACATGAA 59.015 37.037 0.00 5.57 42.21 2.57
272 273 8.713971 TCTTTGTGACTATATACCCACATGAAT 58.286 33.333 0.00 0.00 39.01 2.57
273 274 9.342308 CTTTGTGACTATATACCCACATGAATT 57.658 33.333 0.00 0.00 39.01 2.17
274 275 9.693739 TTTGTGACTATATACCCACATGAATTT 57.306 29.630 0.00 0.00 39.01 1.82
275 276 8.902540 TGTGACTATATACCCACATGAATTTC 57.097 34.615 0.00 0.00 34.96 2.17
276 277 7.655732 TGTGACTATATACCCACATGAATTTCG 59.344 37.037 0.00 0.00 34.96 3.46
277 278 7.870954 GTGACTATATACCCACATGAATTTCGA 59.129 37.037 0.00 0.00 0.00 3.71
278 279 8.425703 TGACTATATACCCACATGAATTTCGAA 58.574 33.333 0.00 0.00 0.00 3.71
279 280 8.833231 ACTATATACCCACATGAATTTCGAAG 57.167 34.615 0.00 0.00 0.00 3.79
280 281 8.647796 ACTATATACCCACATGAATTTCGAAGA 58.352 33.333 0.00 0.00 0.00 2.87
281 282 9.489084 CTATATACCCACATGAATTTCGAAGAA 57.511 33.333 0.00 0.00 45.90 2.52
282 283 8.924511 ATATACCCACATGAATTTCGAAGAAT 57.075 30.769 0.00 0.00 45.90 2.40
283 284 5.982890 ACCCACATGAATTTCGAAGAATT 57.017 34.783 0.00 0.00 45.90 2.17
284 285 8.746052 ATACCCACATGAATTTCGAAGAATTA 57.254 30.769 0.00 0.00 45.90 1.40
285 286 7.461182 ACCCACATGAATTTCGAAGAATTAA 57.539 32.000 0.00 0.00 45.90 1.40
286 287 8.066612 ACCCACATGAATTTCGAAGAATTAAT 57.933 30.769 0.00 0.00 45.90 1.40
287 288 8.531146 ACCCACATGAATTTCGAAGAATTAATT 58.469 29.630 0.00 0.00 45.90 1.40
288 289 8.810427 CCCACATGAATTTCGAAGAATTAATTG 58.190 33.333 5.17 0.00 45.90 2.32
289 290 8.323140 CCACATGAATTTCGAAGAATTAATTGC 58.677 33.333 5.17 0.00 45.90 3.56
290 291 8.323140 CACATGAATTTCGAAGAATTAATTGCC 58.677 33.333 5.17 0.00 45.90 4.52
291 292 8.034215 ACATGAATTTCGAAGAATTAATTGCCA 58.966 29.630 5.17 0.00 45.90 4.92
292 293 9.037737 CATGAATTTCGAAGAATTAATTGCCAT 57.962 29.630 5.17 0.00 45.90 4.40
293 294 8.410030 TGAATTTCGAAGAATTAATTGCCATG 57.590 30.769 5.17 0.00 45.90 3.66
294 295 7.492020 TGAATTTCGAAGAATTAATTGCCATGG 59.508 33.333 7.63 7.63 45.90 3.66
295 296 5.913137 TTCGAAGAATTAATTGCCATGGT 57.087 34.783 14.67 0.00 45.90 3.55
296 297 5.247507 TCGAAGAATTAATTGCCATGGTG 57.752 39.130 14.67 0.00 0.00 4.17
297 298 4.097741 TCGAAGAATTAATTGCCATGGTGG 59.902 41.667 14.67 0.00 41.55 4.61
298 299 4.097741 CGAAGAATTAATTGCCATGGTGGA 59.902 41.667 14.67 0.00 40.96 4.02
299 300 5.221303 CGAAGAATTAATTGCCATGGTGGAT 60.221 40.000 14.67 2.14 40.96 3.41
300 301 5.796424 AGAATTAATTGCCATGGTGGATC 57.204 39.130 14.67 0.00 40.96 3.36
301 302 4.279169 AGAATTAATTGCCATGGTGGATCG 59.721 41.667 14.67 0.00 40.96 3.69
302 303 1.979855 TAATTGCCATGGTGGATCGG 58.020 50.000 14.67 0.00 40.96 4.18
303 304 0.258484 AATTGCCATGGTGGATCGGA 59.742 50.000 14.67 0.00 40.96 4.55
304 305 0.258484 ATTGCCATGGTGGATCGGAA 59.742 50.000 14.67 0.00 40.96 4.30
305 306 0.258484 TTGCCATGGTGGATCGGAAT 59.742 50.000 14.67 0.00 40.96 3.01
306 307 1.135960 TGCCATGGTGGATCGGAATA 58.864 50.000 14.67 0.00 40.96 1.75
307 308 1.704628 TGCCATGGTGGATCGGAATAT 59.295 47.619 14.67 0.00 40.96 1.28
308 309 2.108075 TGCCATGGTGGATCGGAATATT 59.892 45.455 14.67 0.00 40.96 1.28
309 310 3.329225 TGCCATGGTGGATCGGAATATTA 59.671 43.478 14.67 0.00 40.96 0.98
310 311 4.018506 TGCCATGGTGGATCGGAATATTAT 60.019 41.667 14.67 0.00 40.96 1.28
311 312 5.190726 TGCCATGGTGGATCGGAATATTATA 59.809 40.000 14.67 0.00 40.96 0.98
312 313 6.119536 GCCATGGTGGATCGGAATATTATAA 58.880 40.000 14.67 0.00 40.96 0.98
313 314 6.772716 GCCATGGTGGATCGGAATATTATAAT 59.227 38.462 14.67 2.97 40.96 1.28
314 315 7.936847 GCCATGGTGGATCGGAATATTATAATA 59.063 37.037 14.67 7.62 40.96 0.98
352 353 9.902684 ATGTCTCTTGAAATTCAGAATACATCT 57.097 29.630 0.00 0.00 39.68 2.90
353 354 9.730705 TGTCTCTTGAAATTCAGAATACATCTT 57.269 29.630 0.00 0.00 35.73 2.40
366 367 9.739276 TCAGAATACATCTTTGAATTACCAAGT 57.261 29.630 0.00 0.00 35.73 3.16
419 420 9.857957 AAAAATTTGAACATTGCTTCAATTTGT 57.142 22.222 12.18 9.03 39.37 2.83
420 421 8.844441 AAATTTGAACATTGCTTCAATTTGTG 57.156 26.923 12.18 0.00 39.37 3.33
421 422 7.789273 ATTTGAACATTGCTTCAATTTGTGA 57.211 28.000 12.18 2.09 39.37 3.58
422 423 7.606858 TTTGAACATTGCTTCAATTTGTGAA 57.393 28.000 12.18 0.00 44.20 3.18
423 424 7.789273 TTGAACATTGCTTCAATTTGTGAAT 57.211 28.000 9.09 0.00 45.27 2.57
424 425 8.883954 TTGAACATTGCTTCAATTTGTGAATA 57.116 26.923 9.09 0.00 45.27 1.75
425 426 8.883954 TGAACATTGCTTCAATTTGTGAATAA 57.116 26.923 0.00 0.00 45.27 1.40
426 427 9.322773 TGAACATTGCTTCAATTTGTGAATAAA 57.677 25.926 0.00 0.00 45.27 1.40
470 471 8.824159 TTCTTTCACTTGTGAACAAATTTTCA 57.176 26.923 14.80 0.00 35.15 2.69
471 472 8.824159 TCTTTCACTTGTGAACAAATTTTCAA 57.176 26.923 14.80 0.00 37.24 2.69
472 473 9.265901 TCTTTCACTTGTGAACAAATTTTCAAA 57.734 25.926 14.80 0.00 37.24 2.69
473 474 9.875675 CTTTCACTTGTGAACAAATTTTCAAAA 57.124 25.926 14.80 0.00 37.24 2.44
476 477 9.212641 TCACTTGTGAACAAATTTTCAAAATCA 57.787 25.926 0.44 0.00 37.24 2.57
477 478 9.991388 CACTTGTGAACAAATTTTCAAAATCAT 57.009 25.926 0.00 0.00 37.24 2.45
478 479 9.991388 ACTTGTGAACAAATTTTCAAAATCATG 57.009 25.926 0.00 1.85 37.24 3.07
479 480 8.838452 TTGTGAACAAATTTTCAAAATCATGC 57.162 26.923 0.00 0.00 37.24 4.06
480 481 7.124471 TGTGAACAAATTTTCAAAATCATGCG 58.876 30.769 0.00 0.00 37.24 4.73
481 482 7.010830 TGTGAACAAATTTTCAAAATCATGCGA 59.989 29.630 0.00 0.00 37.24 5.10
482 483 8.011106 GTGAACAAATTTTCAAAATCATGCGAT 58.989 29.630 0.00 0.00 37.24 4.58
483 484 8.010540 TGAACAAATTTTCAAAATCATGCGATG 58.989 29.630 0.00 0.00 32.42 3.84
484 485 7.655236 ACAAATTTTCAAAATCATGCGATGA 57.345 28.000 0.00 2.05 44.55 2.92
485 486 7.735500 ACAAATTTTCAAAATCATGCGATGAG 58.264 30.769 0.00 0.00 43.53 2.90
486 487 7.599621 ACAAATTTTCAAAATCATGCGATGAGA 59.400 29.630 0.00 0.00 43.53 3.27
487 488 8.600625 CAAATTTTCAAAATCATGCGATGAGAT 58.399 29.630 0.00 0.00 43.53 2.75
488 489 7.694388 ATTTTCAAAATCATGCGATGAGATG 57.306 32.000 0.00 4.59 43.53 2.90
489 490 4.219143 TCAAAATCATGCGATGAGATGC 57.781 40.909 5.33 0.00 43.53 3.91
490 491 2.963498 AAATCATGCGATGAGATGCG 57.037 45.000 5.33 0.00 43.53 4.73
491 492 2.159327 AATCATGCGATGAGATGCGA 57.841 45.000 5.33 0.00 43.53 5.10
492 493 2.159327 ATCATGCGATGAGATGCGAA 57.841 45.000 5.33 0.00 43.53 4.70
493 494 1.211743 TCATGCGATGAGATGCGAAC 58.788 50.000 0.00 0.00 33.59 3.95
494 495 0.932399 CATGCGATGAGATGCGAACA 59.068 50.000 0.00 0.00 0.00 3.18
495 496 1.328374 CATGCGATGAGATGCGAACAA 59.672 47.619 0.00 0.00 0.00 2.83
496 497 1.437625 TGCGATGAGATGCGAACAAA 58.562 45.000 0.00 0.00 0.00 2.83
497 498 1.803555 TGCGATGAGATGCGAACAAAA 59.196 42.857 0.00 0.00 0.00 2.44
498 499 2.419673 TGCGATGAGATGCGAACAAAAT 59.580 40.909 0.00 0.00 0.00 1.82
499 500 2.780014 GCGATGAGATGCGAACAAAATG 59.220 45.455 0.00 0.00 0.00 2.32
500 501 3.728864 GCGATGAGATGCGAACAAAATGT 60.729 43.478 0.00 0.00 0.00 2.71
501 502 3.782369 CGATGAGATGCGAACAAAATGTG 59.218 43.478 0.00 0.00 0.00 3.21
502 503 3.557577 TGAGATGCGAACAAAATGTGG 57.442 42.857 0.00 0.00 0.00 4.17
503 504 2.884012 TGAGATGCGAACAAAATGTGGT 59.116 40.909 0.00 0.00 0.00 4.16
504 505 3.058293 TGAGATGCGAACAAAATGTGGTC 60.058 43.478 0.00 0.00 40.94 4.02
505 506 2.884012 AGATGCGAACAAAATGTGGTCA 59.116 40.909 0.00 0.00 45.06 4.02
506 507 3.507233 AGATGCGAACAAAATGTGGTCAT 59.493 39.130 0.00 0.00 45.06 3.06
507 508 3.281341 TGCGAACAAAATGTGGTCATC 57.719 42.857 0.00 0.00 45.06 2.92
508 509 2.241722 GCGAACAAAATGTGGTCATCG 58.758 47.619 0.00 0.00 45.06 3.84
509 510 2.241722 CGAACAAAATGTGGTCATCGC 58.758 47.619 0.00 0.00 45.06 4.58
510 511 2.595386 GAACAAAATGTGGTCATCGCC 58.405 47.619 0.00 0.00 44.12 5.54
511 512 1.614996 ACAAAATGTGGTCATCGCCA 58.385 45.000 0.00 0.00 35.93 5.69
512 513 2.170166 ACAAAATGTGGTCATCGCCAT 58.830 42.857 0.00 0.00 41.08 4.40
513 514 2.164219 ACAAAATGTGGTCATCGCCATC 59.836 45.455 0.00 0.00 41.08 3.51
514 515 1.016627 AAATGTGGTCATCGCCATCG 58.983 50.000 0.00 0.00 41.08 3.84
530 531 7.905604 TCGCCATCGAAGATTATGATTATTT 57.094 32.000 0.00 0.00 45.12 1.40
531 532 8.322906 TCGCCATCGAAGATTATGATTATTTT 57.677 30.769 0.00 0.00 45.12 1.82
532 533 8.783093 TCGCCATCGAAGATTATGATTATTTTT 58.217 29.630 0.00 0.00 45.12 1.94
533 534 9.055248 CGCCATCGAAGATTATGATTATTTTTC 57.945 33.333 0.00 0.00 45.12 2.29
542 543 9.736023 AGATTATGATTATTTTTCTTCCGTTGC 57.264 29.630 0.00 0.00 0.00 4.17
543 544 9.515020 GATTATGATTATTTTTCTTCCGTTGCA 57.485 29.630 0.00 0.00 0.00 4.08
544 545 9.868277 ATTATGATTATTTTTCTTCCGTTGCAA 57.132 25.926 0.00 0.00 0.00 4.08
545 546 7.581011 ATGATTATTTTTCTTCCGTTGCAAC 57.419 32.000 19.89 19.89 0.00 4.17
559 560 3.601685 CAACGCACGGGCCCTTTT 61.602 61.111 22.43 0.00 36.38 2.27
560 561 3.601685 AACGCACGGGCCCTTTTG 61.602 61.111 22.43 15.24 36.38 2.44
563 564 2.675075 GCACGGGCCCTTTTGCTA 60.675 61.111 25.28 0.00 32.00 3.49
564 565 2.700773 GCACGGGCCCTTTTGCTAG 61.701 63.158 25.28 9.64 32.00 3.42
565 566 1.303317 CACGGGCCCTTTTGCTAGT 60.303 57.895 22.43 4.23 0.00 2.57
566 567 1.303317 ACGGGCCCTTTTGCTAGTG 60.303 57.895 22.43 1.74 0.00 2.74
567 568 1.303317 CGGGCCCTTTTGCTAGTGT 60.303 57.895 22.43 0.00 0.00 3.55
568 569 0.893727 CGGGCCCTTTTGCTAGTGTT 60.894 55.000 22.43 0.00 0.00 3.32
569 570 1.338107 GGGCCCTTTTGCTAGTGTTT 58.662 50.000 17.04 0.00 0.00 2.83
570 571 1.272490 GGGCCCTTTTGCTAGTGTTTC 59.728 52.381 17.04 0.00 0.00 2.78
571 572 1.960689 GGCCCTTTTGCTAGTGTTTCA 59.039 47.619 0.00 0.00 0.00 2.69
572 573 2.562738 GGCCCTTTTGCTAGTGTTTCAT 59.437 45.455 0.00 0.00 0.00 2.57
573 574 3.761752 GGCCCTTTTGCTAGTGTTTCATA 59.238 43.478 0.00 0.00 0.00 2.15
574 575 4.219725 GGCCCTTTTGCTAGTGTTTCATAA 59.780 41.667 0.00 0.00 0.00 1.90
575 576 5.279256 GGCCCTTTTGCTAGTGTTTCATAAA 60.279 40.000 0.00 0.00 0.00 1.40
576 577 6.398095 GCCCTTTTGCTAGTGTTTCATAAAT 58.602 36.000 0.00 0.00 0.00 1.40
577 578 6.873605 GCCCTTTTGCTAGTGTTTCATAAATT 59.126 34.615 0.00 0.00 0.00 1.82
578 579 7.387673 GCCCTTTTGCTAGTGTTTCATAAATTT 59.612 33.333 0.00 0.00 0.00 1.82
579 580 8.925700 CCCTTTTGCTAGTGTTTCATAAATTTC 58.074 33.333 0.00 0.00 0.00 2.17
580 581 9.696917 CCTTTTGCTAGTGTTTCATAAATTTCT 57.303 29.630 0.00 0.00 0.00 2.52
621 622 8.635765 ATGTGTAAAATTTCTCACATAGGTGT 57.364 30.769 25.73 12.06 45.45 4.16
622 623 9.733556 ATGTGTAAAATTTCTCACATAGGTGTA 57.266 29.630 25.73 8.74 45.45 2.90
623 624 9.562408 TGTGTAAAATTTCTCACATAGGTGTAA 57.438 29.630 18.17 0.94 45.45 2.41
630 631 9.840427 AATTTCTCACATAGGTGTAAAATTTCG 57.160 29.630 19.83 0.00 45.45 3.46
631 632 7.972832 TTCTCACATAGGTGTAAAATTTCGT 57.027 32.000 7.49 0.00 45.45 3.85
632 633 7.972832 TCTCACATAGGTGTAAAATTTCGTT 57.027 32.000 7.49 0.00 45.45 3.85
633 634 9.491675 TTCTCACATAGGTGTAAAATTTCGTTA 57.508 29.630 7.49 0.00 45.45 3.18
634 635 9.146984 TCTCACATAGGTGTAAAATTTCGTTAG 57.853 33.333 7.49 0.00 45.45 2.34
635 636 9.146984 CTCACATAGGTGTAAAATTTCGTTAGA 57.853 33.333 7.49 0.00 45.45 2.10
636 637 9.491675 TCACATAGGTGTAAAATTTCGTTAGAA 57.508 29.630 7.49 0.00 45.45 2.10
717 718 9.822185 ATCAAATGGTTTTGCTATTAGAAATCC 57.178 29.630 0.00 0.00 41.66 3.01
718 719 8.811017 TCAAATGGTTTTGCTATTAGAAATCCA 58.189 29.630 9.74 9.74 41.66 3.41
719 720 9.603921 CAAATGGTTTTGCTATTAGAAATCCAT 57.396 29.630 12.31 12.31 40.79 3.41
720 721 9.603921 AAATGGTTTTGCTATTAGAAATCCATG 57.396 29.630 16.11 0.00 39.27 3.66
721 722 7.953005 TGGTTTTGCTATTAGAAATCCATGA 57.047 32.000 0.00 0.00 29.73 3.07
722 723 8.537728 TGGTTTTGCTATTAGAAATCCATGAT 57.462 30.769 0.00 0.00 29.73 2.45
723 724 8.980596 TGGTTTTGCTATTAGAAATCCATGATT 58.019 29.630 0.00 0.00 33.25 2.57
724 725 9.822185 GGTTTTGCTATTAGAAATCCATGATTT 57.178 29.630 1.87 1.87 43.77 2.17
726 727 8.876275 TTTGCTATTAGAAATCCATGATTTGC 57.124 30.769 6.78 4.17 41.56 3.68
727 728 7.585579 TGCTATTAGAAATCCATGATTTGCA 57.414 32.000 6.78 6.40 41.56 4.08
728 729 8.185506 TGCTATTAGAAATCCATGATTTGCAT 57.814 30.769 6.78 0.19 41.56 3.96
729 730 8.644216 TGCTATTAGAAATCCATGATTTGCATT 58.356 29.630 6.78 0.00 41.56 3.56
748 749 5.773637 CATTATTTAAATGCACGACTCGC 57.226 39.130 11.05 0.00 0.00 5.03
749 750 5.501715 CATTATTTAAATGCACGACTCGCT 58.498 37.500 11.05 0.00 0.00 4.93
750 751 5.539582 TTATTTAAATGCACGACTCGCTT 57.460 34.783 11.05 0.00 0.00 4.68
751 752 6.650239 TTATTTAAATGCACGACTCGCTTA 57.350 33.333 11.05 0.00 0.00 3.09
752 753 5.734855 ATTTAAATGCACGACTCGCTTAT 57.265 34.783 0.00 0.00 0.00 1.73
753 754 4.514545 TTAAATGCACGACTCGCTTATG 57.485 40.909 0.00 0.00 0.00 1.90
754 755 0.652592 AATGCACGACTCGCTTATGC 59.347 50.000 0.00 1.59 36.81 3.14
755 756 1.154205 ATGCACGACTCGCTTATGCC 61.154 55.000 8.72 0.00 35.37 4.40
756 757 2.860628 GCACGACTCGCTTATGCCG 61.861 63.158 0.00 0.00 35.36 5.69
757 758 1.226575 CACGACTCGCTTATGCCGA 60.227 57.895 0.00 0.96 35.36 5.54
758 759 1.226603 ACGACTCGCTTATGCCGAC 60.227 57.895 0.00 0.00 35.36 4.79
759 760 1.064296 CGACTCGCTTATGCCGACT 59.936 57.895 0.00 0.00 35.36 4.18
760 761 0.525668 CGACTCGCTTATGCCGACTT 60.526 55.000 0.00 0.00 35.36 3.01
761 762 1.641577 GACTCGCTTATGCCGACTTT 58.358 50.000 0.00 0.00 35.36 2.66
762 763 2.000447 GACTCGCTTATGCCGACTTTT 59.000 47.619 0.00 0.00 35.36 2.27
763 764 2.415512 GACTCGCTTATGCCGACTTTTT 59.584 45.455 0.00 0.00 35.36 1.94
805 806 5.721000 TGGAAAATAAGTTTGGCATGGATCT 59.279 36.000 0.00 0.00 0.00 2.75
909 932 2.650196 GAGGCAATGGCAACGCAA 59.350 55.556 10.05 0.00 43.71 4.85
1012 1038 1.953231 CTCGCAGATGCTCACCTCCA 61.953 60.000 2.95 0.00 39.32 3.86
1324 1365 2.047830 CCTACACCTACTTCCCCATCC 58.952 57.143 0.00 0.00 0.00 3.51
1548 1589 2.125912 GTCGTCAGCGCCATCTGT 60.126 61.111 2.29 0.00 38.14 3.41
1579 1620 3.923645 TGGACGAGGGGGTGGAGT 61.924 66.667 0.00 0.00 0.00 3.85
1608 1649 0.403271 AGCTGTCATCCTTTGGCTGT 59.597 50.000 0.00 0.00 31.98 4.40
1609 1650 1.630369 AGCTGTCATCCTTTGGCTGTA 59.370 47.619 0.00 0.00 31.98 2.74
1629 1670 2.311124 AGCCGGACATTGTTAGCTAC 57.689 50.000 5.05 0.00 0.00 3.58
1725 1766 0.105760 TGGATTGCCCGCCCAATATT 60.106 50.000 0.00 0.00 35.67 1.28
1779 1820 1.349688 AGGAACGGGTTGTATGAGCAA 59.650 47.619 0.00 0.00 0.00 3.91
1789 1830 3.615224 TGTATGAGCAAGTGCATGAGA 57.385 42.857 6.00 0.00 45.16 3.27
1804 1845 0.391661 TGAGACCCTTTCGCAGATGC 60.392 55.000 0.00 0.00 35.04 3.91
1839 1880 4.225042 TGCACACCAGACTTAAGGATGTAT 59.775 41.667 7.53 0.00 0.00 2.29
1848 1889 5.036117 ACTTAAGGATGTATGCGACCATT 57.964 39.130 7.53 0.00 32.85 3.16
1878 1919 0.611618 TTTGCAAGGACGGGCATCAT 60.612 50.000 0.00 0.00 40.17 2.45
1938 1979 1.963515 GGTCTCAAGCCCAATGTTGTT 59.036 47.619 0.00 0.00 0.00 2.83
2058 2099 7.200455 TCGATGACGTGACATTCAATATACTT 58.800 34.615 0.00 0.00 40.69 2.24
2136 2177 5.125356 CAGATGTTGGAGTATGGTTGCATA 58.875 41.667 0.00 0.00 0.00 3.14
2160 2201 7.418337 ACCAGATGTTATCACATACACTACA 57.582 36.000 0.00 0.00 44.22 2.74
2191 2232 3.385193 GCTTTTGCAAAGAAGGGCTTA 57.615 42.857 12.41 0.00 46.58 3.09
2292 2333 0.465460 AAGGTTTGTGCAGAGCCGAA 60.465 50.000 0.00 0.00 0.00 4.30
2307 2348 1.515954 CGAACGGTGGGTAGATGCT 59.484 57.895 0.00 0.00 0.00 3.79
2445 2486 6.946340 TCTTAAGCAGATGTTAGTGAATGGA 58.054 36.000 0.00 0.00 0.00 3.41
2472 2513 5.361285 CAGTCCTGACCTTATTAGCTACAGT 59.639 44.000 0.00 0.00 0.00 3.55
2543 2584 7.936496 TGGAGCTGTTAAATGTTATGATCAA 57.064 32.000 0.00 0.00 0.00 2.57
2610 2651 5.104109 ATCTGCTCTGTCTAGAGAAGGTAGT 60.104 44.000 11.42 0.00 46.44 2.73
2640 2681 6.772716 ACAAGGTTATTCAGATGTTTGACAGT 59.227 34.615 0.00 0.00 0.00 3.55
2658 2699 3.774766 ACAGTATCCAAGATGCCACAGTA 59.225 43.478 0.00 0.00 0.00 2.74
2697 2738 6.151691 GCTTTACAATGCTGTCATTTCTTCA 58.848 36.000 0.00 0.00 40.74 3.02
2802 2843 9.075678 TCAACCTACACTATACTTATTAGAGGC 57.924 37.037 0.00 0.00 0.00 4.70
2842 2883 1.260544 AAGGGAGGCACAAGATTTGC 58.739 50.000 0.00 0.00 39.41 3.68
2851 2892 3.057033 GGCACAAGATTTGCTGAGTGAAT 60.057 43.478 0.00 0.00 40.07 2.57
2961 3006 5.376625 GAGGAGATTATTGTGGTGGCATTA 58.623 41.667 0.00 0.00 0.00 1.90
2962 3007 5.133221 AGGAGATTATTGTGGTGGCATTAC 58.867 41.667 0.00 0.00 0.00 1.89
3018 3063 4.848357 CTCATGAAGGTTGGTAGGTGAAT 58.152 43.478 0.00 0.00 0.00 2.57
3035 3080 2.742053 TGAATCCGTGAAAGCTTGTAGC 59.258 45.455 0.00 0.00 42.84 3.58
3067 3113 6.764379 TGTTTTCCACTGTATGATGTAGTGA 58.236 36.000 11.03 0.00 43.35 3.41
3099 3145 6.928348 TGTAGTTTCTGATAGGTCAAAGGA 57.072 37.500 0.00 0.00 33.05 3.36
3123 3169 7.972832 GGAGGATAGTTAAGTTATACATACGGC 59.027 40.741 0.00 0.00 0.00 5.68
3124 3170 8.413309 AGGATAGTTAAGTTATACATACGGCA 57.587 34.615 0.00 0.00 0.00 5.69
3217 3265 9.740710 ATAGCCTGTTAGAACTTAGAAATGTTT 57.259 29.630 0.00 0.00 0.00 2.83
3229 3277 8.798859 ACTTAGAAATGTTTATCTGATGCAGT 57.201 30.769 0.00 0.00 32.61 4.40
3233 3281 5.824904 AATGTTTATCTGATGCAGTGACC 57.175 39.130 0.00 0.00 32.61 4.02
3243 3291 1.004918 GCAGTGACCGCCTTAGTGT 60.005 57.895 0.00 0.00 0.00 3.55
3300 3350 5.864474 AGCAGAATTAGTACTTGTCTGTTCG 59.136 40.000 21.64 6.49 38.36 3.95
3332 3407 7.571080 TTCCAACTAATCCTTTGTTTAACGT 57.429 32.000 0.00 0.00 0.00 3.99
3541 3698 4.288626 TGGGAGCCAGTTGTAATTTCTACT 59.711 41.667 0.00 0.00 0.00 2.57
3585 3742 9.162764 TCTAATTGCTAAACTTGACCTAATCAC 57.837 33.333 0.00 0.00 36.92 3.06
3609 3767 5.226396 CGTGGATTTGGTTTAATTTCAGCA 58.774 37.500 0.00 0.00 0.00 4.41
3625 3783 1.065102 CAGCATCCTTTCGGCTCATTG 59.935 52.381 0.00 0.00 35.27 2.82
3662 3820 5.269554 ACATAAACCCTTCTTCATGGGAA 57.730 39.130 4.93 0.00 46.15 3.97
3759 3918 5.235616 TGAAAGTCATTACGTTGAGTTGGTC 59.764 40.000 10.33 6.76 38.85 4.02
3782 3941 4.145756 CGCAACCGTGTCTTTAAACATTTC 59.854 41.667 0.00 0.00 0.00 2.17
3813 3972 6.475402 ACAAAAGGTTTTACTTTGCAATCTCG 59.525 34.615 0.00 0.00 40.36 4.04
3851 4010 7.156876 TCCACCTTAAATCATAAAACTGCAG 57.843 36.000 13.48 13.48 0.00 4.41
3865 4024 2.944129 ACTGCAGGAACTAAAAGCCAA 58.056 42.857 19.93 0.00 36.02 4.52
3892 4051 7.653713 ACAAACAATTCAATTTACCGCATGTAA 59.346 29.630 0.00 0.00 37.65 2.41
3893 4052 7.810766 AACAATTCAATTTACCGCATGTAAG 57.189 32.000 0.00 0.00 40.42 2.34
3898 4057 7.566760 TTCAATTTACCGCATGTAAGATGAT 57.433 32.000 0.00 0.00 40.42 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.874205 TTTTCTTTTGAATCAACAGACAATTCT 57.126 25.926 10.98 0.00 38.37 2.40
3 4 9.906111 GTTTTCTTTTGAATCAACAGACAATTC 57.094 29.630 10.98 0.00 38.37 2.17
4 5 9.434420 TGTTTTCTTTTGAATCAACAGACAATT 57.566 25.926 10.98 0.00 35.47 2.32
5 6 8.872845 GTGTTTTCTTTTGAATCAACAGACAAT 58.127 29.630 10.98 0.00 38.83 2.71
6 7 8.087750 AGTGTTTTCTTTTGAATCAACAGACAA 58.912 29.630 10.98 8.64 38.83 3.18
7 8 7.601856 AGTGTTTTCTTTTGAATCAACAGACA 58.398 30.769 10.98 2.90 38.83 3.41
8 9 8.375465 CAAGTGTTTTCTTTTGAATCAACAGAC 58.625 33.333 10.98 2.64 38.83 3.51
9 10 8.303156 TCAAGTGTTTTCTTTTGAATCAACAGA 58.697 29.630 7.67 7.67 38.83 3.41
10 11 8.464770 TCAAGTGTTTTCTTTTGAATCAACAG 57.535 30.769 2.90 2.90 38.83 3.16
11 12 8.824159 TTCAAGTGTTTTCTTTTGAATCAACA 57.176 26.923 0.00 0.00 37.03 3.33
14 15 8.716909 GGTTTTCAAGTGTTTTCTTTTGAATCA 58.283 29.630 0.06 0.00 38.77 2.57
15 16 7.897800 CGGTTTTCAAGTGTTTTCTTTTGAATC 59.102 33.333 0.06 0.00 38.77 2.52
16 17 7.386573 ACGGTTTTCAAGTGTTTTCTTTTGAAT 59.613 29.630 0.06 0.00 38.77 2.57
17 18 6.702282 ACGGTTTTCAAGTGTTTTCTTTTGAA 59.298 30.769 0.00 0.00 37.66 2.69
18 19 6.217294 ACGGTTTTCAAGTGTTTTCTTTTGA 58.783 32.000 0.00 0.00 0.00 2.69
19 20 6.460664 ACGGTTTTCAAGTGTTTTCTTTTG 57.539 33.333 0.00 0.00 0.00 2.44
20 21 6.129035 CGAACGGTTTTCAAGTGTTTTCTTTT 60.129 34.615 0.00 0.00 0.00 2.27
21 22 5.343860 CGAACGGTTTTCAAGTGTTTTCTTT 59.656 36.000 0.00 0.00 0.00 2.52
22 23 4.854839 CGAACGGTTTTCAAGTGTTTTCTT 59.145 37.500 0.00 0.00 0.00 2.52
23 24 4.408694 CGAACGGTTTTCAAGTGTTTTCT 58.591 39.130 0.00 0.00 0.00 2.52
24 25 3.001464 GCGAACGGTTTTCAAGTGTTTTC 60.001 43.478 0.00 0.00 0.00 2.29
25 26 2.918600 GCGAACGGTTTTCAAGTGTTTT 59.081 40.909 0.00 0.00 0.00 2.43
26 27 2.095161 TGCGAACGGTTTTCAAGTGTTT 60.095 40.909 0.00 0.00 0.00 2.83
27 28 1.469308 TGCGAACGGTTTTCAAGTGTT 59.531 42.857 0.00 0.00 0.00 3.32
28 29 1.088306 TGCGAACGGTTTTCAAGTGT 58.912 45.000 0.00 0.00 0.00 3.55
29 30 2.181426 TTGCGAACGGTTTTCAAGTG 57.819 45.000 0.00 0.00 0.00 3.16
30 31 4.759516 ATATTGCGAACGGTTTTCAAGT 57.240 36.364 12.10 4.19 0.00 3.16
31 32 7.555639 TTTTATATTGCGAACGGTTTTCAAG 57.444 32.000 12.10 0.00 0.00 3.02
32 33 7.925703 TTTTTATATTGCGAACGGTTTTCAA 57.074 28.000 9.89 9.89 0.00 2.69
84 85 9.439500 ACTGTGAACACTTTTTAGTAGTTACAA 57.561 29.630 6.51 0.00 0.00 2.41
85 86 9.439500 AACTGTGAACACTTTTTAGTAGTTACA 57.561 29.630 6.51 0.00 0.00 2.41
88 89 8.241367 CCAAACTGTGAACACTTTTTAGTAGTT 58.759 33.333 6.51 2.71 0.00 2.24
89 90 7.608761 TCCAAACTGTGAACACTTTTTAGTAGT 59.391 33.333 6.51 0.00 0.00 2.73
90 91 7.981142 TCCAAACTGTGAACACTTTTTAGTAG 58.019 34.615 6.51 0.00 0.00 2.57
91 92 7.925043 TCCAAACTGTGAACACTTTTTAGTA 57.075 32.000 6.51 0.00 0.00 1.82
92 93 6.827586 TCCAAACTGTGAACACTTTTTAGT 57.172 33.333 6.51 0.00 0.00 2.24
93 94 8.527567 TTTTCCAAACTGTGAACACTTTTTAG 57.472 30.769 6.51 0.00 0.00 1.85
94 95 8.888579 TTTTTCCAAACTGTGAACACTTTTTA 57.111 26.923 6.51 0.00 0.00 1.52
95 96 7.793927 TTTTTCCAAACTGTGAACACTTTTT 57.206 28.000 6.51 3.28 0.00 1.94
96 97 7.443879 ACATTTTTCCAAACTGTGAACACTTTT 59.556 29.630 6.51 3.59 0.00 2.27
97 98 6.934083 ACATTTTTCCAAACTGTGAACACTTT 59.066 30.769 6.51 0.00 0.00 2.66
98 99 6.463360 ACATTTTTCCAAACTGTGAACACTT 58.537 32.000 6.51 0.00 0.00 3.16
99 100 6.036577 ACATTTTTCCAAACTGTGAACACT 57.963 33.333 6.51 0.00 0.00 3.55
100 101 6.183360 GGAACATTTTTCCAAACTGTGAACAC 60.183 38.462 0.00 0.00 38.45 3.32
101 102 5.872070 GGAACATTTTTCCAAACTGTGAACA 59.128 36.000 0.00 0.00 38.45 3.18
102 103 5.293324 GGGAACATTTTTCCAAACTGTGAAC 59.707 40.000 4.08 0.00 40.32 3.18
103 104 5.046304 TGGGAACATTTTTCCAAACTGTGAA 60.046 36.000 4.08 0.00 40.32 3.18
104 105 4.467795 TGGGAACATTTTTCCAAACTGTGA 59.532 37.500 4.08 0.00 40.32 3.58
105 106 4.764172 TGGGAACATTTTTCCAAACTGTG 58.236 39.130 4.08 0.00 40.32 3.66
106 107 5.428184 TTGGGAACATTTTTCCAAACTGT 57.572 34.783 1.57 0.00 42.32 3.55
111 112 8.807948 TTACAAATTTGGGAACATTTTTCCAA 57.192 26.923 21.74 0.00 42.32 3.53
112 113 8.807948 TTTACAAATTTGGGAACATTTTTCCA 57.192 26.923 21.74 0.00 42.32 3.53
119 120 9.401058 TCAACATTTTTACAAATTTGGGAACAT 57.599 25.926 21.74 11.15 32.77 2.71
120 121 8.792830 TCAACATTTTTACAAATTTGGGAACA 57.207 26.923 21.74 9.50 31.29 3.18
121 122 9.715123 CTTCAACATTTTTACAAATTTGGGAAC 57.285 29.630 21.74 0.00 29.41 3.62
122 123 9.672673 TCTTCAACATTTTTACAAATTTGGGAA 57.327 25.926 21.74 12.48 29.41 3.97
123 124 9.672673 TTCTTCAACATTTTTACAAATTTGGGA 57.327 25.926 21.74 7.02 29.41 4.37
137 138 9.965902 AGTACCTTCTATCATTCTTCAACATTT 57.034 29.630 0.00 0.00 0.00 2.32
138 139 9.606631 GAGTACCTTCTATCATTCTTCAACATT 57.393 33.333 0.00 0.00 0.00 2.71
139 140 8.207545 GGAGTACCTTCTATCATTCTTCAACAT 58.792 37.037 0.00 0.00 0.00 2.71
140 141 7.364762 GGGAGTACCTTCTATCATTCTTCAACA 60.365 40.741 0.00 0.00 35.85 3.33
141 142 6.987404 GGGAGTACCTTCTATCATTCTTCAAC 59.013 42.308 0.00 0.00 35.85 3.18
142 143 7.125792 GGGAGTACCTTCTATCATTCTTCAA 57.874 40.000 0.00 0.00 35.85 2.69
143 144 6.732896 GGGAGTACCTTCTATCATTCTTCA 57.267 41.667 0.00 0.00 35.85 3.02
150 151 9.245055 TCAGAATGGAGGGAGTACCTTCTATCA 62.245 44.444 0.00 0.00 46.12 2.15
151 152 6.921201 TCAGAATGGAGGGAGTACCTTCTATC 60.921 46.154 0.00 0.00 46.12 2.08
152 153 5.103043 TCAGAATGGAGGGAGTACCTTCTAT 60.103 44.000 0.00 0.00 46.12 1.98
153 154 4.232122 TCAGAATGGAGGGAGTACCTTCTA 59.768 45.833 0.00 0.00 46.12 2.10
154 155 3.012959 TCAGAATGGAGGGAGTACCTTCT 59.987 47.826 0.00 0.00 46.12 2.85
155 156 3.375699 TCAGAATGGAGGGAGTACCTTC 58.624 50.000 0.00 0.00 43.28 3.46
156 157 3.491766 TCAGAATGGAGGGAGTACCTT 57.508 47.619 0.00 0.00 43.28 3.50
157 158 3.715648 ATCAGAATGGAGGGAGTACCT 57.284 47.619 0.00 0.00 45.44 3.08
158 159 4.779993 AAATCAGAATGGAGGGAGTACC 57.220 45.455 0.00 0.00 36.16 3.34
159 160 6.487299 AGTAAATCAGAATGGAGGGAGTAC 57.513 41.667 0.00 0.00 36.16 2.73
160 161 5.302059 CGAGTAAATCAGAATGGAGGGAGTA 59.698 44.000 0.00 0.00 36.16 2.59
161 162 4.100189 CGAGTAAATCAGAATGGAGGGAGT 59.900 45.833 0.00 0.00 36.16 3.85
162 163 4.100189 ACGAGTAAATCAGAATGGAGGGAG 59.900 45.833 0.00 0.00 36.16 4.30
163 164 4.030913 ACGAGTAAATCAGAATGGAGGGA 58.969 43.478 0.00 0.00 36.16 4.20
164 165 4.372656 GACGAGTAAATCAGAATGGAGGG 58.627 47.826 0.00 0.00 36.16 4.30
165 166 4.045104 CGACGAGTAAATCAGAATGGAGG 58.955 47.826 0.00 0.00 36.16 4.30
166 167 4.500837 CACGACGAGTAAATCAGAATGGAG 59.499 45.833 0.00 0.00 36.16 3.86
167 168 4.157105 TCACGACGAGTAAATCAGAATGGA 59.843 41.667 0.00 0.00 36.16 3.41
168 169 4.421058 TCACGACGAGTAAATCAGAATGG 58.579 43.478 0.00 0.00 36.16 3.16
169 170 6.575083 AATCACGACGAGTAAATCAGAATG 57.425 37.500 0.00 0.00 37.54 2.67
170 171 7.596749 AAAATCACGACGAGTAAATCAGAAT 57.403 32.000 0.00 0.00 0.00 2.40
171 172 7.811236 ACTAAAATCACGACGAGTAAATCAGAA 59.189 33.333 0.00 0.00 0.00 3.02
172 173 7.310664 ACTAAAATCACGACGAGTAAATCAGA 58.689 34.615 0.00 0.00 0.00 3.27
173 174 7.507672 ACTAAAATCACGACGAGTAAATCAG 57.492 36.000 0.00 0.00 0.00 2.90
174 175 7.595875 TGAACTAAAATCACGACGAGTAAATCA 59.404 33.333 0.00 0.00 0.00 2.57
175 176 7.946043 TGAACTAAAATCACGACGAGTAAATC 58.054 34.615 0.00 0.00 0.00 2.17
176 177 7.878477 TGAACTAAAATCACGACGAGTAAAT 57.122 32.000 0.00 0.00 0.00 1.40
177 178 7.697352 TTGAACTAAAATCACGACGAGTAAA 57.303 32.000 0.00 0.00 0.00 2.01
178 179 7.697352 TTTGAACTAAAATCACGACGAGTAA 57.303 32.000 0.00 0.00 0.00 2.24
179 180 7.201291 CGATTTGAACTAAAATCACGACGAGTA 60.201 37.037 0.00 0.00 43.69 2.59
180 181 6.399669 CGATTTGAACTAAAATCACGACGAGT 60.400 38.462 0.00 0.00 43.69 4.18
181 182 5.946389 CGATTTGAACTAAAATCACGACGAG 59.054 40.000 0.00 0.00 43.69 4.18
182 183 5.164031 CCGATTTGAACTAAAATCACGACGA 60.164 40.000 0.00 0.00 43.69 4.20
183 184 5.013236 CCGATTTGAACTAAAATCACGACG 58.987 41.667 9.57 0.00 43.69 5.12
184 185 6.160664 TCCGATTTGAACTAAAATCACGAC 57.839 37.500 9.57 0.00 43.69 4.34
185 186 6.595794 GTTCCGATTTGAACTAAAATCACGA 58.404 36.000 9.57 2.74 43.69 4.35
186 187 5.503376 CGTTCCGATTTGAACTAAAATCACG 59.497 40.000 9.57 7.98 43.69 4.35
187 188 5.793457 CCGTTCCGATTTGAACTAAAATCAC 59.207 40.000 9.57 1.32 43.69 3.06
188 189 5.701750 TCCGTTCCGATTTGAACTAAAATCA 59.298 36.000 9.57 0.00 43.69 2.57
189 190 6.173191 TCCGTTCCGATTTGAACTAAAATC 57.827 37.500 0.00 0.00 41.95 2.17
190 191 5.123344 CCTCCGTTCCGATTTGAACTAAAAT 59.877 40.000 0.00 0.00 41.95 1.82
191 192 4.453136 CCTCCGTTCCGATTTGAACTAAAA 59.547 41.667 0.00 0.00 41.95 1.52
192 193 3.998341 CCTCCGTTCCGATTTGAACTAAA 59.002 43.478 0.00 0.00 41.95 1.85
193 194 3.592059 CCTCCGTTCCGATTTGAACTAA 58.408 45.455 0.00 0.00 41.95 2.24
194 195 2.093869 CCCTCCGTTCCGATTTGAACTA 60.094 50.000 0.00 0.00 41.95 2.24
195 196 1.338769 CCCTCCGTTCCGATTTGAACT 60.339 52.381 0.00 0.00 41.95 3.01
196 197 1.084289 CCCTCCGTTCCGATTTGAAC 58.916 55.000 0.00 0.00 40.96 3.18
197 198 0.978151 TCCCTCCGTTCCGATTTGAA 59.022 50.000 0.00 0.00 0.00 2.69
198 199 0.535335 CTCCCTCCGTTCCGATTTGA 59.465 55.000 0.00 0.00 0.00 2.69
199 200 0.249398 ACTCCCTCCGTTCCGATTTG 59.751 55.000 0.00 0.00 0.00 2.32
200 201 1.856629 TACTCCCTCCGTTCCGATTT 58.143 50.000 0.00 0.00 0.00 2.17
201 202 1.687123 CATACTCCCTCCGTTCCGATT 59.313 52.381 0.00 0.00 0.00 3.34
202 203 1.329256 CATACTCCCTCCGTTCCGAT 58.671 55.000 0.00 0.00 0.00 4.18
203 204 0.033796 ACATACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
204 205 1.607628 CTACATACTCCCTCCGTTCCG 59.392 57.143 0.00 0.00 0.00 4.30
205 206 2.664015 ACTACATACTCCCTCCGTTCC 58.336 52.381 0.00 0.00 0.00 3.62
206 207 5.841957 TTAACTACATACTCCCTCCGTTC 57.158 43.478 0.00 0.00 0.00 3.95
207 208 6.610075 TTTTAACTACATACTCCCTCCGTT 57.390 37.500 0.00 0.00 0.00 4.44
208 209 6.610075 TTTTTAACTACATACTCCCTCCGT 57.390 37.500 0.00 0.00 0.00 4.69
209 210 9.603921 TTAATTTTTAACTACATACTCCCTCCG 57.396 33.333 0.00 0.00 0.00 4.63
229 230 9.899226 GTCACAAAGACTTAGAAGCATTAATTT 57.101 29.630 0.00 0.00 44.09 1.82
246 247 7.669089 TCATGTGGGTATATAGTCACAAAGA 57.331 36.000 17.00 15.13 42.35 2.52
247 248 8.908786 ATTCATGTGGGTATATAGTCACAAAG 57.091 34.615 17.00 13.76 42.35 2.77
248 249 9.693739 AAATTCATGTGGGTATATAGTCACAAA 57.306 29.630 17.00 11.03 42.35 2.83
249 250 9.337396 GAAATTCATGTGGGTATATAGTCACAA 57.663 33.333 17.00 6.50 42.35 3.33
250 251 7.655732 CGAAATTCATGTGGGTATATAGTCACA 59.344 37.037 15.97 15.97 43.07 3.58
251 252 7.870954 TCGAAATTCATGTGGGTATATAGTCAC 59.129 37.037 7.91 7.91 0.00 3.67
252 253 7.958088 TCGAAATTCATGTGGGTATATAGTCA 58.042 34.615 0.00 0.00 0.00 3.41
253 254 8.827177 TTCGAAATTCATGTGGGTATATAGTC 57.173 34.615 0.00 0.00 0.00 2.59
254 255 8.647796 TCTTCGAAATTCATGTGGGTATATAGT 58.352 33.333 0.00 0.00 0.00 2.12
255 256 9.489084 TTCTTCGAAATTCATGTGGGTATATAG 57.511 33.333 0.00 0.00 0.00 1.31
257 258 8.924511 ATTCTTCGAAATTCATGTGGGTATAT 57.075 30.769 0.00 0.00 0.00 0.86
258 259 8.746052 AATTCTTCGAAATTCATGTGGGTATA 57.254 30.769 0.00 0.00 0.00 1.47
259 260 7.645058 AATTCTTCGAAATTCATGTGGGTAT 57.355 32.000 0.00 0.00 0.00 2.73
260 261 8.568676 TTAATTCTTCGAAATTCATGTGGGTA 57.431 30.769 0.00 0.00 31.50 3.69
261 262 5.982890 AATTCTTCGAAATTCATGTGGGT 57.017 34.783 0.00 0.00 0.00 4.51
262 263 8.810427 CAATTAATTCTTCGAAATTCATGTGGG 58.190 33.333 0.00 0.00 31.50 4.61
263 264 8.323140 GCAATTAATTCTTCGAAATTCATGTGG 58.677 33.333 0.00 0.00 31.50 4.17
264 265 8.323140 GGCAATTAATTCTTCGAAATTCATGTG 58.677 33.333 0.00 0.00 31.50 3.21
265 266 8.034215 TGGCAATTAATTCTTCGAAATTCATGT 58.966 29.630 0.00 0.00 31.50 3.21
266 267 8.410030 TGGCAATTAATTCTTCGAAATTCATG 57.590 30.769 0.00 0.00 31.50 3.07
267 268 9.037737 CATGGCAATTAATTCTTCGAAATTCAT 57.962 29.630 0.00 0.00 31.50 2.57
268 269 7.492020 CCATGGCAATTAATTCTTCGAAATTCA 59.508 33.333 0.00 0.00 31.50 2.57
269 270 7.492344 ACCATGGCAATTAATTCTTCGAAATTC 59.508 33.333 13.04 0.00 31.50 2.17
270 271 7.278424 CACCATGGCAATTAATTCTTCGAAATT 59.722 33.333 13.04 0.00 33.54 1.82
271 272 6.757947 CACCATGGCAATTAATTCTTCGAAAT 59.242 34.615 13.04 0.00 0.00 2.17
272 273 6.098679 CACCATGGCAATTAATTCTTCGAAA 58.901 36.000 13.04 0.00 0.00 3.46
273 274 5.394005 CCACCATGGCAATTAATTCTTCGAA 60.394 40.000 13.04 0.00 0.00 3.71
274 275 4.097741 CCACCATGGCAATTAATTCTTCGA 59.902 41.667 13.04 0.00 0.00 3.71
275 276 4.097741 TCCACCATGGCAATTAATTCTTCG 59.902 41.667 13.04 0.00 37.47 3.79
276 277 5.596836 TCCACCATGGCAATTAATTCTTC 57.403 39.130 13.04 0.00 37.47 2.87
277 278 5.221303 CGATCCACCATGGCAATTAATTCTT 60.221 40.000 13.04 0.00 37.47 2.52
278 279 4.279169 CGATCCACCATGGCAATTAATTCT 59.721 41.667 13.04 0.00 37.47 2.40
279 280 4.549458 CGATCCACCATGGCAATTAATTC 58.451 43.478 13.04 0.00 37.47 2.17
280 281 3.321682 CCGATCCACCATGGCAATTAATT 59.678 43.478 13.04 0.00 37.47 1.40
281 282 2.892852 CCGATCCACCATGGCAATTAAT 59.107 45.455 13.04 0.00 37.47 1.40
282 283 2.092158 TCCGATCCACCATGGCAATTAA 60.092 45.455 13.04 0.00 37.47 1.40
283 284 1.492599 TCCGATCCACCATGGCAATTA 59.507 47.619 13.04 0.00 37.47 1.40
284 285 0.258484 TCCGATCCACCATGGCAATT 59.742 50.000 13.04 0.00 37.47 2.32
285 286 0.258484 TTCCGATCCACCATGGCAAT 59.742 50.000 13.04 2.30 37.47 3.56
286 287 0.258484 ATTCCGATCCACCATGGCAA 59.742 50.000 13.04 0.00 37.47 4.52
287 288 1.135960 TATTCCGATCCACCATGGCA 58.864 50.000 13.04 0.00 37.47 4.92
288 289 2.496899 ATATTCCGATCCACCATGGC 57.503 50.000 13.04 0.00 37.47 4.40
326 327 9.902684 AGATGTATTCTGAATTTCAAGAGACAT 57.097 29.630 15.86 15.86 31.79 3.06
327 328 9.730705 AAGATGTATTCTGAATTTCAAGAGACA 57.269 29.630 8.38 4.68 33.93 3.41
340 341 9.739276 ACTTGGTAATTCAAAGATGTATTCTGA 57.261 29.630 2.65 0.00 33.93 3.27
393 394 9.857957 ACAAATTGAAGCAATGTTCAAATTTTT 57.142 22.222 0.00 7.98 46.73 1.94
394 395 9.291664 CACAAATTGAAGCAATGTTCAAATTTT 57.708 25.926 0.00 8.46 46.73 1.82
395 396 8.675504 TCACAAATTGAAGCAATGTTCAAATTT 58.324 25.926 0.00 6.16 46.73 1.82
396 397 8.211116 TCACAAATTGAAGCAATGTTCAAATT 57.789 26.923 0.00 9.14 46.73 1.82
397 398 7.789273 TCACAAATTGAAGCAATGTTCAAAT 57.211 28.000 0.00 4.81 46.73 2.32
398 399 7.606858 TTCACAAATTGAAGCAATGTTCAAA 57.393 28.000 0.00 0.00 46.73 2.69
450 451 9.212641 TGATTTTGAAAATTTGTTCACAAGTGA 57.787 25.926 4.46 0.00 37.24 3.41
451 452 9.991388 ATGATTTTGAAAATTTGTTCACAAGTG 57.009 25.926 4.46 0.00 37.24 3.16
452 453 9.991388 CATGATTTTGAAAATTTGTTCACAAGT 57.009 25.926 4.46 0.00 37.24 3.16
453 454 8.949953 GCATGATTTTGAAAATTTGTTCACAAG 58.050 29.630 4.46 0.00 37.24 3.16
454 455 7.639072 CGCATGATTTTGAAAATTTGTTCACAA 59.361 29.630 4.46 0.00 37.24 3.33
455 456 7.010830 TCGCATGATTTTGAAAATTTGTTCACA 59.989 29.630 4.46 0.00 37.24 3.58
456 457 7.343691 TCGCATGATTTTGAAAATTTGTTCAC 58.656 30.769 4.46 0.00 37.24 3.18
457 458 7.474398 TCGCATGATTTTGAAAATTTGTTCA 57.526 28.000 4.46 0.00 35.72 3.18
458 459 8.222433 TCATCGCATGATTTTGAAAATTTGTTC 58.778 29.630 4.46 0.00 33.59 3.18
459 460 8.085720 TCATCGCATGATTTTGAAAATTTGTT 57.914 26.923 4.46 0.00 33.59 2.83
460 461 7.599621 TCTCATCGCATGATTTTGAAAATTTGT 59.400 29.630 4.46 0.00 38.85 2.83
461 462 7.955502 TCTCATCGCATGATTTTGAAAATTTG 58.044 30.769 4.46 7.26 38.85 2.32
462 463 8.600625 CATCTCATCGCATGATTTTGAAAATTT 58.399 29.630 4.46 0.00 38.85 1.82
463 464 7.254319 GCATCTCATCGCATGATTTTGAAAATT 60.254 33.333 4.46 0.00 38.85 1.82
464 465 6.200286 GCATCTCATCGCATGATTTTGAAAAT 59.800 34.615 2.27 2.27 38.85 1.82
465 466 5.517411 GCATCTCATCGCATGATTTTGAAAA 59.483 36.000 0.00 0.00 38.85 2.29
466 467 5.038683 GCATCTCATCGCATGATTTTGAAA 58.961 37.500 0.00 0.00 38.85 2.69
467 468 4.603985 GCATCTCATCGCATGATTTTGAA 58.396 39.130 0.00 0.00 38.85 2.69
468 469 3.303526 CGCATCTCATCGCATGATTTTGA 60.304 43.478 0.00 0.00 38.85 2.69
469 470 2.971261 CGCATCTCATCGCATGATTTTG 59.029 45.455 0.00 0.00 38.85 2.44
470 471 2.874086 TCGCATCTCATCGCATGATTTT 59.126 40.909 0.00 0.00 38.85 1.82
471 472 2.486918 TCGCATCTCATCGCATGATTT 58.513 42.857 0.00 0.00 38.85 2.17
472 473 2.159327 TCGCATCTCATCGCATGATT 57.841 45.000 0.00 0.00 38.85 2.57
473 474 1.797046 GTTCGCATCTCATCGCATGAT 59.203 47.619 0.00 0.00 38.85 2.45
474 475 1.211743 GTTCGCATCTCATCGCATGA 58.788 50.000 0.00 0.05 37.76 3.07
475 476 0.932399 TGTTCGCATCTCATCGCATG 59.068 50.000 0.00 0.00 0.00 4.06
476 477 1.655484 TTGTTCGCATCTCATCGCAT 58.345 45.000 0.00 0.00 0.00 4.73
477 478 1.437625 TTTGTTCGCATCTCATCGCA 58.562 45.000 0.00 0.00 0.00 5.10
478 479 2.525750 TTTTGTTCGCATCTCATCGC 57.474 45.000 0.00 0.00 0.00 4.58
479 480 3.782369 CACATTTTGTTCGCATCTCATCG 59.218 43.478 0.00 0.00 0.00 3.84
480 481 4.100529 CCACATTTTGTTCGCATCTCATC 58.899 43.478 0.00 0.00 0.00 2.92
481 482 3.507233 ACCACATTTTGTTCGCATCTCAT 59.493 39.130 0.00 0.00 0.00 2.90
482 483 2.884012 ACCACATTTTGTTCGCATCTCA 59.116 40.909 0.00 0.00 0.00 3.27
483 484 3.058293 TGACCACATTTTGTTCGCATCTC 60.058 43.478 0.00 0.00 0.00 2.75
484 485 2.884012 TGACCACATTTTGTTCGCATCT 59.116 40.909 0.00 0.00 0.00 2.90
485 486 3.281341 TGACCACATTTTGTTCGCATC 57.719 42.857 0.00 0.00 0.00 3.91
486 487 3.670359 CGATGACCACATTTTGTTCGCAT 60.670 43.478 0.00 0.00 36.82 4.73
487 488 2.350293 CGATGACCACATTTTGTTCGCA 60.350 45.455 0.00 0.00 36.82 5.10
488 489 2.241722 CGATGACCACATTTTGTTCGC 58.758 47.619 0.00 0.00 36.82 4.70
489 490 2.241722 GCGATGACCACATTTTGTTCG 58.758 47.619 0.00 0.00 36.82 3.95
490 491 2.030363 TGGCGATGACCACATTTTGTTC 60.030 45.455 0.00 0.00 36.82 3.18
491 492 1.959985 TGGCGATGACCACATTTTGTT 59.040 42.857 0.00 0.00 36.82 2.83
492 493 1.614996 TGGCGATGACCACATTTTGT 58.385 45.000 0.00 0.00 36.82 2.83
493 494 2.792196 CGATGGCGATGACCACATTTTG 60.792 50.000 0.00 0.00 44.17 2.44
494 495 1.401552 CGATGGCGATGACCACATTTT 59.598 47.619 0.00 0.00 44.17 1.82
495 496 1.016627 CGATGGCGATGACCACATTT 58.983 50.000 0.00 0.00 44.17 2.32
496 497 0.177836 TCGATGGCGATGACCACATT 59.822 50.000 0.00 0.00 44.17 2.71
497 498 1.822615 TCGATGGCGATGACCACAT 59.177 52.632 0.00 0.00 44.17 3.21
498 499 3.293702 TCGATGGCGATGACCACA 58.706 55.556 0.00 0.00 44.17 4.17
506 507 7.905604 AAATAATCATAATCTTCGATGGCGA 57.094 32.000 0.00 0.00 46.33 5.54
507 508 8.955061 AAAAATAATCATAATCTTCGATGGCG 57.045 30.769 0.00 0.00 39.35 5.69
516 517 9.736023 GCAACGGAAGAAAAATAATCATAATCT 57.264 29.630 0.00 0.00 0.00 2.40
517 518 9.515020 TGCAACGGAAGAAAAATAATCATAATC 57.485 29.630 0.00 0.00 0.00 1.75
518 519 9.868277 TTGCAACGGAAGAAAAATAATCATAAT 57.132 25.926 0.00 0.00 0.00 1.28
519 520 9.134734 GTTGCAACGGAAGAAAAATAATCATAA 57.865 29.630 14.90 0.00 0.00 1.90
520 521 8.682128 GTTGCAACGGAAGAAAAATAATCATA 57.318 30.769 14.90 0.00 0.00 2.15
521 522 7.581011 GTTGCAACGGAAGAAAAATAATCAT 57.419 32.000 14.90 0.00 0.00 2.45
542 543 3.601685 AAAAGGGCCCGTGCGTTG 61.602 61.111 18.44 0.00 38.85 4.10
543 544 3.601685 CAAAAGGGCCCGTGCGTT 61.602 61.111 18.44 0.59 38.85 4.84
546 547 2.675075 TAGCAAAAGGGCCCGTGC 60.675 61.111 30.21 30.21 37.26 5.34
547 548 1.303317 ACTAGCAAAAGGGCCCGTG 60.303 57.895 18.44 17.24 0.00 4.94
548 549 1.303317 CACTAGCAAAAGGGCCCGT 60.303 57.895 18.44 11.44 0.00 5.28
549 550 0.893727 AACACTAGCAAAAGGGCCCG 60.894 55.000 18.44 2.33 0.00 6.13
550 551 1.272490 GAAACACTAGCAAAAGGGCCC 59.728 52.381 16.46 16.46 0.00 5.80
551 552 1.960689 TGAAACACTAGCAAAAGGGCC 59.039 47.619 0.00 0.00 0.00 5.80
552 553 3.942130 ATGAAACACTAGCAAAAGGGC 57.058 42.857 0.00 0.00 0.00 5.19
553 554 8.831715 AAATTTATGAAACACTAGCAAAAGGG 57.168 30.769 0.00 0.00 0.00 3.95
554 555 9.696917 AGAAATTTATGAAACACTAGCAAAAGG 57.303 29.630 0.00 0.00 0.00 3.11
597 598 9.562408 TTACACCTATGTGAGAAATTTTACACA 57.438 29.630 23.33 23.33 45.76 3.72
604 605 9.840427 CGAAATTTTACACCTATGTGAGAAATT 57.160 29.630 5.05 12.13 45.76 1.82
605 606 9.010029 ACGAAATTTTACACCTATGTGAGAAAT 57.990 29.630 5.05 7.61 45.76 2.17
606 607 8.385898 ACGAAATTTTACACCTATGTGAGAAA 57.614 30.769 5.05 5.83 45.76 2.52
607 608 7.972832 ACGAAATTTTACACCTATGTGAGAA 57.027 32.000 5.05 0.00 45.76 2.87
608 609 7.972832 AACGAAATTTTACACCTATGTGAGA 57.027 32.000 5.05 0.00 45.76 3.27
609 610 9.146984 TCTAACGAAATTTTACACCTATGTGAG 57.853 33.333 5.05 0.00 45.76 3.51
610 611 9.491675 TTCTAACGAAATTTTACACCTATGTGA 57.508 29.630 5.05 0.00 45.76 3.58
693 694 9.603921 ATGGATTTCTAATAGCAAAACCATTTG 57.396 29.630 14.73 0.00 40.43 2.32
694 695 9.603921 CATGGATTTCTAATAGCAAAACCATTT 57.396 29.630 16.40 4.49 40.43 2.32
695 696 8.980596 TCATGGATTTCTAATAGCAAAACCATT 58.019 29.630 16.40 7.06 40.43 3.16
696 697 8.537728 TCATGGATTTCTAATAGCAAAACCAT 57.462 30.769 14.73 14.73 42.71 3.55
697 698 7.953005 TCATGGATTTCTAATAGCAAAACCA 57.047 32.000 12.59 12.59 38.41 3.67
698 699 9.822185 AAATCATGGATTTCTAATAGCAAAACC 57.178 29.630 0.00 5.32 37.68 3.27
700 701 9.316730 GCAAATCATGGATTTCTAATAGCAAAA 57.683 29.630 1.40 0.00 39.82 2.44
701 702 8.476447 TGCAAATCATGGATTTCTAATAGCAAA 58.524 29.630 1.40 0.00 39.82 3.68
702 703 8.009622 TGCAAATCATGGATTTCTAATAGCAA 57.990 30.769 1.40 0.00 39.82 3.91
703 704 7.585579 TGCAAATCATGGATTTCTAATAGCA 57.414 32.000 1.40 5.03 39.82 3.49
726 727 5.501715 AGCGAGTCGTGCATTTAAATAATG 58.498 37.500 15.08 0.00 33.85 1.90
727 728 5.734855 AGCGAGTCGTGCATTTAAATAAT 57.265 34.783 15.08 0.00 33.85 1.28
728 729 5.539582 AAGCGAGTCGTGCATTTAAATAA 57.460 34.783 15.08 0.00 33.85 1.40
729 730 6.645705 CATAAGCGAGTCGTGCATTTAAATA 58.354 36.000 15.08 0.00 33.85 1.40
730 731 5.501715 CATAAGCGAGTCGTGCATTTAAAT 58.498 37.500 15.08 0.00 33.85 1.40
731 732 4.726591 GCATAAGCGAGTCGTGCATTTAAA 60.727 41.667 17.88 0.00 35.93 1.52
732 733 3.242284 GCATAAGCGAGTCGTGCATTTAA 60.242 43.478 17.88 0.00 35.93 1.52
733 734 2.284150 GCATAAGCGAGTCGTGCATTTA 59.716 45.455 17.88 8.74 35.93 1.40
734 735 1.062587 GCATAAGCGAGTCGTGCATTT 59.937 47.619 17.88 7.13 35.93 2.32
735 736 0.652592 GCATAAGCGAGTCGTGCATT 59.347 50.000 17.88 9.47 35.93 3.56
736 737 1.154205 GGCATAAGCGAGTCGTGCAT 61.154 55.000 22.39 8.23 43.41 3.96
737 738 1.809619 GGCATAAGCGAGTCGTGCA 60.810 57.895 22.39 6.41 43.41 4.57
738 739 2.860628 CGGCATAAGCGAGTCGTGC 61.861 63.158 15.08 15.22 43.41 5.34
739 740 1.226575 TCGGCATAAGCGAGTCGTG 60.227 57.895 15.08 5.43 43.41 4.35
740 741 1.226603 GTCGGCATAAGCGAGTCGT 60.227 57.895 15.08 0.00 43.41 4.34
741 742 0.525668 AAGTCGGCATAAGCGAGTCG 60.526 55.000 8.54 8.54 43.41 4.18
742 743 1.641577 AAAGTCGGCATAAGCGAGTC 58.358 50.000 0.00 0.00 43.41 3.36
743 744 2.094762 AAAAGTCGGCATAAGCGAGT 57.905 45.000 0.00 0.00 43.41 4.18
761 762 3.820467 CCACATACTGCCTGTCTCAAAAA 59.180 43.478 0.00 0.00 0.00 1.94
762 763 3.072330 TCCACATACTGCCTGTCTCAAAA 59.928 43.478 0.00 0.00 0.00 2.44
763 764 2.637382 TCCACATACTGCCTGTCTCAAA 59.363 45.455 0.00 0.00 0.00 2.69
764 765 2.256306 TCCACATACTGCCTGTCTCAA 58.744 47.619 0.00 0.00 0.00 3.02
765 766 1.937191 TCCACATACTGCCTGTCTCA 58.063 50.000 0.00 0.00 0.00 3.27
766 767 3.334583 TTTCCACATACTGCCTGTCTC 57.665 47.619 0.00 0.00 0.00 3.36
767 768 3.788227 TTTTCCACATACTGCCTGTCT 57.212 42.857 0.00 0.00 0.00 3.41
768 769 5.648092 ACTTATTTTCCACATACTGCCTGTC 59.352 40.000 0.00 0.00 0.00 3.51
769 770 5.570320 ACTTATTTTCCACATACTGCCTGT 58.430 37.500 0.00 0.00 0.00 4.00
770 771 6.515272 AACTTATTTTCCACATACTGCCTG 57.485 37.500 0.00 0.00 0.00 4.85
771 772 6.071391 CCAAACTTATTTTCCACATACTGCCT 60.071 38.462 0.00 0.00 0.00 4.75
772 773 6.099341 CCAAACTTATTTTCCACATACTGCC 58.901 40.000 0.00 0.00 0.00 4.85
773 774 5.576774 GCCAAACTTATTTTCCACATACTGC 59.423 40.000 0.00 0.00 0.00 4.40
774 775 6.686630 TGCCAAACTTATTTTCCACATACTG 58.313 36.000 0.00 0.00 0.00 2.74
775 776 6.909550 TGCCAAACTTATTTTCCACATACT 57.090 33.333 0.00 0.00 0.00 2.12
776 777 6.534793 CCATGCCAAACTTATTTTCCACATAC 59.465 38.462 0.00 0.00 0.00 2.39
777 778 6.438741 TCCATGCCAAACTTATTTTCCACATA 59.561 34.615 0.00 0.00 0.00 2.29
778 779 5.248020 TCCATGCCAAACTTATTTTCCACAT 59.752 36.000 0.00 0.00 0.00 3.21
779 780 4.590647 TCCATGCCAAACTTATTTTCCACA 59.409 37.500 0.00 0.00 0.00 4.17
780 781 5.146010 TCCATGCCAAACTTATTTTCCAC 57.854 39.130 0.00 0.00 0.00 4.02
781 782 5.721000 AGATCCATGCCAAACTTATTTTCCA 59.279 36.000 0.00 0.00 0.00 3.53
782 783 6.225981 AGATCCATGCCAAACTTATTTTCC 57.774 37.500 0.00 0.00 0.00 3.13
909 932 3.077519 GCCACTGGATAGCGGACGT 62.078 63.158 0.00 0.00 0.00 4.34
946 969 3.282745 GAGGACGAGCTGTGGCGAA 62.283 63.158 0.00 0.00 44.37 4.70
949 972 3.695606 TGGAGGACGAGCTGTGGC 61.696 66.667 0.00 0.00 39.06 5.01
1091 1132 2.829003 CGCCAGCGTAGAGGGAGA 60.829 66.667 3.35 0.00 34.35 3.71
1215 1256 1.817941 GGCGACCATGGCGTTGTAT 60.818 57.895 23.32 0.00 0.00 2.29
1362 1403 3.891586 TTCGTCGAGCACCGTGAGC 62.892 63.158 1.65 0.00 39.75 4.26
1608 1649 3.196039 TGTAGCTAACAATGTCCGGCTTA 59.804 43.478 11.46 0.00 34.29 3.09
1609 1650 2.027561 TGTAGCTAACAATGTCCGGCTT 60.028 45.455 11.46 0.00 34.29 4.35
1629 1670 3.726517 CCCTTGAGCACCGCGTTG 61.727 66.667 4.92 0.75 0.00 4.10
1725 1766 3.737559 ATGAGGGTATTGAAAGTGGCA 57.262 42.857 0.00 0.00 0.00 4.92
1779 1820 0.674895 GCGAAAGGGTCTCATGCACT 60.675 55.000 0.00 0.00 0.00 4.40
1789 1830 1.377725 CTGGCATCTGCGAAAGGGT 60.378 57.895 0.00 0.00 43.26 4.34
1824 1865 3.704566 TGGTCGCATACATCCTTAAGTCT 59.295 43.478 0.97 0.00 0.00 3.24
1839 1880 1.066752 CCCGTCGATAATGGTCGCA 59.933 57.895 0.00 0.00 41.22 5.10
1848 1889 1.483004 TCCTTGCAAATCCCGTCGATA 59.517 47.619 0.00 0.00 0.00 2.92
1878 1919 5.697473 TCAAAATATCGTTTGCAACCTCA 57.303 34.783 0.00 0.00 38.20 3.86
1962 2003 1.886313 CCGCTCAGCACTGCATAGG 60.886 63.158 3.30 0.00 0.00 2.57
2058 2099 3.794028 CGTTTTGGCAAAAGAAATCGACA 59.206 39.130 24.69 0.00 0.00 4.35
2136 2177 7.124298 ACTGTAGTGTATGTGATAACATCTGGT 59.876 37.037 0.00 0.00 0.00 4.00
2160 2201 7.603784 CCTTCTTTGCAAAAGCCATTAATTACT 59.396 33.333 13.84 0.00 0.00 2.24
2166 2207 3.556843 GCCCTTCTTTGCAAAAGCCATTA 60.557 43.478 13.84 0.00 0.00 1.90
2220 2261 1.536940 TGCATCCACAGGTTGACATG 58.463 50.000 0.00 0.00 0.00 3.21
2292 2333 1.330655 CCTCAGCATCTACCCACCGT 61.331 60.000 0.00 0.00 0.00 4.83
2307 2348 4.995536 TCATATGAGAGATCAGCTCCTCA 58.004 43.478 0.00 8.15 45.10 3.86
2445 2486 3.713764 AGCTAATAAGGTCAGGACTGCAT 59.286 43.478 0.00 0.00 0.00 3.96
2472 2513 2.569853 ACCAAGTCCATCAATCACCGTA 59.430 45.455 0.00 0.00 0.00 4.02
2565 2606 9.431887 GCAGATGCCATTGATGAATAAATTATT 57.568 29.630 0.00 0.00 34.31 1.40
2640 2681 3.780294 ACCTTACTGTGGCATCTTGGATA 59.220 43.478 0.00 0.00 0.00 2.59
2658 2699 2.283145 AAAGCACTGCATCAGACCTT 57.717 45.000 3.30 0.46 35.18 3.50
2697 2738 4.405358 TCAGTTTCCCATCTTTTGCAAAGT 59.595 37.500 12.41 0.01 0.00 2.66
2802 2843 1.689273 ACCAATCCCTCGCTAGCTAAG 59.311 52.381 13.93 9.92 0.00 2.18
2811 2852 0.759346 CCTCCCTTACCAATCCCTCG 59.241 60.000 0.00 0.00 0.00 4.63
2814 2855 0.106669 GTGCCTCCCTTACCAATCCC 60.107 60.000 0.00 0.00 0.00 3.85
2842 2883 4.753610 TCTTCTTGAGCACAATTCACTCAG 59.246 41.667 0.00 0.00 41.21 3.35
2935 2980 3.745797 GCCACCACAATAATCTCCTCCTC 60.746 52.174 0.00 0.00 0.00 3.71
2961 3006 2.208872 AGTAGGCAAATCCATCCTGGT 58.791 47.619 0.00 0.00 39.03 4.00
2962 3007 2.954318 CAAGTAGGCAAATCCATCCTGG 59.046 50.000 0.00 0.00 39.43 4.45
3035 3080 5.239306 TCATACAGTGGAAAACAAGAGCAAG 59.761 40.000 0.00 0.00 0.00 4.01
3041 3086 7.387673 TCACTACATCATACAGTGGAAAACAAG 59.612 37.037 0.00 0.00 40.08 3.16
3044 3089 6.874134 AGTCACTACATCATACAGTGGAAAAC 59.126 38.462 0.00 0.00 40.08 2.43
3099 3145 8.302438 GTGCCGTATGTATAACTTAACTATCCT 58.698 37.037 0.00 0.00 0.00 3.24
3134 3180 5.944007 ACTGGTACCCACAATAAGAATTCAC 59.056 40.000 10.07 0.00 0.00 3.18
3162 3210 8.142551 ACAAGTAGGTGTAGCTAATGTTATAGC 58.857 37.037 0.00 0.00 46.94 2.97
3217 3265 0.104855 GGCGGTCACTGCATCAGATA 59.895 55.000 11.68 0.00 35.18 1.98
3229 3277 4.075963 ACTAAAAACACTAAGGCGGTCA 57.924 40.909 0.00 0.00 0.00 4.02
3233 3281 9.881529 TTATTAACAACTAAAAACACTAAGGCG 57.118 29.630 0.00 0.00 0.00 5.52
3278 3328 7.869016 TTCGAACAGACAAGTACTAATTCTG 57.131 36.000 19.52 19.52 39.72 3.02
3286 3336 6.402226 GGAATCCAATTCGAACAGACAAGTAC 60.402 42.308 0.00 0.00 40.17 2.73
3288 3338 4.455877 GGAATCCAATTCGAACAGACAAGT 59.544 41.667 0.00 0.00 40.17 3.16
3324 3374 7.901874 TTTTCTCACAGCATTTACGTTAAAC 57.098 32.000 0.00 0.00 0.00 2.01
3422 3497 8.204836 GCATTTTCTATCAGTTAGGGTCTCTTA 58.795 37.037 0.00 0.00 0.00 2.10
3423 3498 7.051000 GCATTTTCTATCAGTTAGGGTCTCTT 58.949 38.462 0.00 0.00 0.00 2.85
3507 3664 1.691976 CTGGCTCCCATTACGGATACA 59.308 52.381 0.00 0.00 36.56 2.29
3508 3665 1.692519 ACTGGCTCCCATTACGGATAC 59.307 52.381 0.00 0.00 36.56 2.24
3509 3666 2.097110 ACTGGCTCCCATTACGGATA 57.903 50.000 0.00 0.00 36.56 2.59
3541 3698 8.028938 GCAATTAGAATTTGAGAAGTTTAGCCA 58.971 33.333 0.00 0.00 0.00 4.75
3585 3742 4.625311 GCTGAAATTAAACCAAATCCACGG 59.375 41.667 0.00 0.00 0.00 4.94
3625 3783 5.239525 GGGTTTATGTTGCTCCATAGATGTC 59.760 44.000 0.00 0.00 0.00 3.06
3662 3820 2.679930 GCCGGTAGAAATTACAGCTGGT 60.680 50.000 19.93 6.35 0.00 4.00
3667 3825 7.730364 ATTTATGAGCCGGTAGAAATTACAG 57.270 36.000 1.90 0.00 0.00 2.74
3759 3918 2.741122 TGTTTAAAGACACGGTTGCG 57.259 45.000 0.00 0.00 0.00 4.85
3782 3941 7.801752 TGCAAAGTAAAACCTTTTGTGAAAAG 58.198 30.769 0.00 0.00 45.78 2.27
3851 4010 6.918892 ATTGTTTGTTTGGCTTTTAGTTCC 57.081 33.333 0.00 0.00 0.00 3.62
3865 4024 6.481644 ACATGCGGTAAATTGAATTGTTTGTT 59.518 30.769 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.