Multiple sequence alignment - TraesCS4B01G297500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G297500 chr4B 100.000 6654 0 0 1 6654 582833610 582840263 0.000000e+00 12288.0
1 TraesCS4B01G297500 chr4B 100.000 35 0 0 3738 3772 582835931 582835897 1.550000e-06 65.8
2 TraesCS4B01G297500 chr4B 100.000 35 0 0 2288 2322 582837381 582837347 1.550000e-06 65.8
3 TraesCS4B01G297500 chr4B 96.774 31 1 0 6060 6090 60771896 60771926 1.200000e-02 52.8
4 TraesCS4B01G297500 chr4A 95.211 1775 53 18 4295 6038 4777088 4775315 0.000000e+00 2778.0
5 TraesCS4B01G297500 chr4A 85.586 1228 81 52 746 1900 4779605 4778401 0.000000e+00 1199.0
6 TraesCS4B01G297500 chr4A 83.129 652 56 30 1 607 4785741 4785099 4.540000e-151 545.0
7 TraesCS4B01G297500 chr4A 92.204 372 25 4 6284 6654 4685230 4684862 2.130000e-144 523.0
8 TraesCS4B01G297500 chr4A 91.908 173 10 2 4142 4314 4777284 4777116 8.620000e-59 239.0
9 TraesCS4B01G297500 chr4A 88.832 197 18 3 2277 2472 740895130 740895323 8.620000e-59 239.0
10 TraesCS4B01G297500 chr4A 85.034 147 10 8 6110 6247 4694041 4693898 9.000000e-29 139.0
11 TraesCS4B01G297500 chr4A 95.745 47 2 0 6240 6286 4685292 4685246 7.160000e-10 76.8
12 TraesCS4B01G297500 chr4A 96.970 33 1 0 5930 5962 4775400 4775368 1.000000e-03 56.5
13 TraesCS4B01G297500 chr4D 96.129 1679 34 13 4432 6079 465771525 465773203 0.000000e+00 2712.0
14 TraesCS4B01G297500 chr4D 87.420 1709 88 58 1 1625 465768237 465769902 0.000000e+00 1847.0
15 TraesCS4B01G297500 chr4D 85.034 588 47 18 6104 6654 465895789 465896372 1.620000e-155 560.0
16 TraesCS4B01G297500 chr4D 87.113 194 14 4 4138 4327 465771095 465771281 6.760000e-50 209.0
17 TraesCS4B01G297500 chr1B 99.410 1017 6 0 2277 3293 643836673 643835657 0.000000e+00 1845.0
18 TraesCS4B01G297500 chr1B 98.980 294 3 0 3333 3626 643835657 643835364 1.640000e-145 527.0
19 TraesCS4B01G297500 chr1B 79.710 621 110 16 4604 5216 659724190 659724802 1.020000e-117 435.0
20 TraesCS4B01G297500 chr1B 76.214 597 124 17 4625 5212 664777162 664777749 3.900000e-77 300.0
21 TraesCS4B01G297500 chr1B 100.000 129 0 0 3656 3784 643835365 643835237 8.620000e-59 239.0
22 TraesCS4B01G297500 chr1B 100.000 35 0 0 2288 2322 643835249 643835283 1.550000e-06 65.8
23 TraesCS4B01G297500 chr1B 100.000 35 0 0 3738 3772 643836628 643836662 1.550000e-06 65.8
24 TraesCS4B01G297500 chr2A 84.412 1097 115 28 2732 3783 21457695 21458780 0.000000e+00 1027.0
25 TraesCS4B01G297500 chr2A 82.440 1082 132 35 2737 3788 727614815 727613762 0.000000e+00 893.0
26 TraesCS4B01G297500 chr2A 81.289 481 56 16 2277 2729 21455205 21455679 6.340000e-95 359.0
27 TraesCS4B01G297500 chr2A 97.368 38 1 0 2284 2321 21458773 21458736 1.550000e-06 65.8
28 TraesCS4B01G297500 chr2A 100.000 34 0 0 2288 2321 727613777 727613810 5.570000e-06 63.9
29 TraesCS4B01G297500 chr2A 100.000 32 0 0 3741 3772 21455247 21455216 7.210000e-05 60.2
30 TraesCS4B01G297500 chr2A 100.000 28 0 0 6063 6090 749957413 749957386 1.200000e-02 52.8
31 TraesCS4B01G297500 chr1D 79.549 621 111 16 4604 5216 474375605 474376217 4.770000e-116 429.0
32 TraesCS4B01G297500 chr1D 77.667 600 116 16 4625 5215 477189546 477190136 3.820000e-92 350.0
33 TraesCS4B01G297500 chr1A 77.167 600 119 16 4625 5215 573242938 573243528 3.850000e-87 333.0
34 TraesCS4B01G297500 chr7B 75.622 603 121 21 4621 5210 470836504 470835915 6.570000e-70 276.0
35 TraesCS4B01G297500 chr7B 79.401 267 49 6 5300 5563 130746291 130746028 4.100000e-42 183.0
36 TraesCS4B01G297500 chr7B 96.774 31 1 0 6060 6090 369544159 369544189 1.200000e-02 52.8
37 TraesCS4B01G297500 chr7A 75.537 605 118 26 4621 5210 545934834 545935423 3.060000e-68 270.0
38 TraesCS4B01G297500 chr7A 82.310 277 41 8 5300 5572 545935468 545935740 4.010000e-57 233.0
39 TraesCS4B01G297500 chr7A 81.855 248 41 4 5325 5570 167903624 167903379 8.750000e-49 206.0
40 TraesCS4B01G297500 chr7D 81.455 275 43 8 5300 5570 451186704 451186434 1.120000e-52 219.0
41 TraesCS4B01G297500 chr7D 78.549 317 57 11 5325 5637 166513252 166512943 1.460000e-46 198.0
42 TraesCS4B01G297500 chr7D 100.000 28 0 0 6063 6090 404605835 404605862 1.200000e-02 52.8
43 TraesCS4B01G297500 chr6D 81.111 270 43 8 5300 5565 383227117 383226852 6.760000e-50 209.0
44 TraesCS4B01G297500 chr6D 100.000 28 0 0 6063 6090 428925996 428925969 1.200000e-02 52.8
45 TraesCS4B01G297500 chr6B 79.699 266 46 8 5304 5565 573413978 573413717 1.140000e-42 185.0
46 TraesCS4B01G297500 chr6B 74.110 309 58 18 4919 5216 720952816 720952519 2.540000e-19 108.0
47 TraesCS4B01G297500 chr5D 96.774 31 1 0 6060 6090 423349039 423349069 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G297500 chr4B 582833610 582840263 6653 False 12288.000000 12288 100.000000 1 6654 1 chr4B.!!$F2 6653
1 TraesCS4B01G297500 chr4A 4775315 4779605 4290 True 1068.125000 2778 92.418750 746 6038 4 chr4A.!!$R4 5292
2 TraesCS4B01G297500 chr4A 4785099 4785741 642 True 545.000000 545 83.129000 1 607 1 chr4A.!!$R2 606
3 TraesCS4B01G297500 chr4D 465768237 465773203 4966 False 1589.333333 2712 90.220667 1 6079 3 chr4D.!!$F2 6078
4 TraesCS4B01G297500 chr4D 465895789 465896372 583 False 560.000000 560 85.034000 6104 6654 1 chr4D.!!$F1 550
5 TraesCS4B01G297500 chr1B 643835237 643836673 1436 True 870.333333 1845 99.463333 2277 3784 3 chr1B.!!$R1 1507
6 TraesCS4B01G297500 chr1B 659724190 659724802 612 False 435.000000 435 79.710000 4604 5216 1 chr1B.!!$F1 612
7 TraesCS4B01G297500 chr1B 664777162 664777749 587 False 300.000000 300 76.214000 4625 5212 1 chr1B.!!$F2 587
8 TraesCS4B01G297500 chr2A 727613762 727614815 1053 True 893.000000 893 82.440000 2737 3788 1 chr2A.!!$R1 1051
9 TraesCS4B01G297500 chr2A 21455205 21458780 3575 False 693.000000 1027 82.850500 2277 3783 2 chr2A.!!$F2 1506
10 TraesCS4B01G297500 chr1D 474375605 474376217 612 False 429.000000 429 79.549000 4604 5216 1 chr1D.!!$F1 612
11 TraesCS4B01G297500 chr1D 477189546 477190136 590 False 350.000000 350 77.667000 4625 5215 1 chr1D.!!$F2 590
12 TraesCS4B01G297500 chr1A 573242938 573243528 590 False 333.000000 333 77.167000 4625 5215 1 chr1A.!!$F1 590
13 TraesCS4B01G297500 chr7B 470835915 470836504 589 True 276.000000 276 75.622000 4621 5210 1 chr7B.!!$R2 589
14 TraesCS4B01G297500 chr7A 545934834 545935740 906 False 251.500000 270 78.923500 4621 5572 2 chr7A.!!$F1 951

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 27 0.588252 CGTTGCTGACCAAGTTCAGG 59.412 55.0 2.48 0.00 42.95 3.86 F
550 600 1.246056 GCAGGCAGACTCCAAATGCA 61.246 55.0 0.00 0.00 41.78 3.96 F
1566 1701 0.101939 GATCCGGGTCGTGTAGGAAC 59.898 60.0 0.00 0.00 36.25 3.62 F
2056 2719 0.032952 GATGATTAGCACGGCCGGTA 59.967 55.0 31.76 15.11 0.00 4.02 F
2057 2720 0.033504 ATGATTAGCACGGCCGGTAG 59.966 55.0 31.76 19.77 0.00 3.18 F
2075 2738 0.037232 AGACGGTGCTAACAAGGCTC 60.037 55.0 0.00 0.00 0.00 4.70 F
2076 2739 0.320421 GACGGTGCTAACAAGGCTCA 60.320 55.0 0.00 0.00 0.00 4.26 F
2109 2775 0.512952 CAAGAAACAAGTCCGAGCCG 59.487 55.0 0.00 0.00 0.00 5.52 F
4042 6876 0.253044 TGCCACCAATCAGAGTAGCC 59.747 55.0 0.00 0.00 0.00 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1114 1220 0.249868 TTGAGGTTCACCGACTGCAG 60.250 55.000 13.48 13.48 42.08 4.41 R
2056 2719 0.037232 GAGCCTTGTTAGCACCGTCT 60.037 55.000 0.00 0.00 0.00 4.18 R
3045 5770 1.003718 GCTCGTACAAAGGGTGGCT 60.004 57.895 0.00 0.00 0.00 4.75 R
3961 6737 0.188342 GGTACGGGTATGGGGAGGTA 59.812 60.000 0.00 0.00 0.00 3.08 R
3962 6738 1.075001 GGTACGGGTATGGGGAGGT 60.075 63.158 0.00 0.00 0.00 3.85 R
3963 6739 1.119574 CAGGTACGGGTATGGGGAGG 61.120 65.000 0.00 0.00 0.00 4.30 R
3964 6740 1.755393 GCAGGTACGGGTATGGGGAG 61.755 65.000 0.00 0.00 0.00 4.30 R
4107 6956 0.321671 CAGATAATGCCGGGTCCGAT 59.678 55.000 11.39 0.00 42.83 4.18 R
5997 9201 2.039418 TCCCATCCATAAGAGACACCG 58.961 52.381 0.00 0.00 0.00 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 0.588252 CGTTGCTGACCAAGTTCAGG 59.412 55.000 2.48 0.00 42.95 3.86
39 40 4.381079 CCAAGTTCAGGGTTTCGTCAAAAA 60.381 41.667 0.00 0.00 0.00 1.94
57 58 5.049129 TCAAAAACTGTTGCTTTTGGTTTGG 60.049 36.000 13.32 0.00 41.03 3.28
114 115 3.004629 TGTGAATAATCGATTGGGCATGC 59.995 43.478 20.87 9.90 0.00 4.06
278 292 6.387041 TGAAATGAAATGGATCTGATCTGC 57.613 37.500 16.61 2.65 0.00 4.26
282 296 5.306114 TGAAATGGATCTGATCTGCTGAT 57.694 39.130 16.61 5.69 37.82 2.90
312 326 1.329906 CTCTTCATTCTGCCATCACGC 59.670 52.381 0.00 0.00 0.00 5.34
345 360 1.683943 TAACGTCCGGCTACAGCTAT 58.316 50.000 0.00 0.00 41.70 2.97
346 361 1.683943 AACGTCCGGCTACAGCTATA 58.316 50.000 0.00 0.00 41.70 1.31
403 424 4.061131 TCTTCATCCCAGTACTCCTCAA 57.939 45.455 0.00 0.00 0.00 3.02
404 425 4.425772 TCTTCATCCCAGTACTCCTCAAA 58.574 43.478 0.00 0.00 0.00 2.69
414 435 6.884295 CCCAGTACTCCTCAAATCAAAACATA 59.116 38.462 0.00 0.00 0.00 2.29
415 436 7.557719 CCCAGTACTCCTCAAATCAAAACATAT 59.442 37.037 0.00 0.00 0.00 1.78
515 564 5.044558 TGTTATTTCAACGGCCAAAAACTC 58.955 37.500 2.24 0.00 0.00 3.01
519 568 4.985538 TTCAACGGCCAAAAACTCTTTA 57.014 36.364 2.24 0.00 0.00 1.85
520 569 4.985538 TCAACGGCCAAAAACTCTTTAA 57.014 36.364 2.24 0.00 0.00 1.52
521 570 5.523438 TCAACGGCCAAAAACTCTTTAAT 57.477 34.783 2.24 0.00 0.00 1.40
522 571 5.525199 TCAACGGCCAAAAACTCTTTAATC 58.475 37.500 2.24 0.00 0.00 1.75
523 572 4.155310 ACGGCCAAAAACTCTTTAATCG 57.845 40.909 2.24 0.00 0.00 3.34
524 573 2.914838 CGGCCAAAAACTCTTTAATCGC 59.085 45.455 2.24 0.00 0.00 4.58
525 574 3.610585 CGGCCAAAAACTCTTTAATCGCA 60.611 43.478 2.24 0.00 0.00 5.10
531 580 4.749245 AAACTCTTTAATCGCACACAGG 57.251 40.909 0.00 0.00 0.00 4.00
550 600 1.246056 GCAGGCAGACTCCAAATGCA 61.246 55.000 0.00 0.00 41.78 3.96
611 661 5.535333 CAATCACCTTGCACATTTTTCTCT 58.465 37.500 0.00 0.00 0.00 3.10
614 664 2.893489 ACCTTGCACATTTTTCTCTCCC 59.107 45.455 0.00 0.00 0.00 4.30
664 714 1.674057 AGCTACTTGGCTTCGTGCT 59.326 52.632 0.00 0.00 39.86 4.40
702 752 2.600470 CTCACAGCAAGAGGGAGATC 57.400 55.000 0.00 0.00 0.00 2.75
703 753 1.829849 CTCACAGCAAGAGGGAGATCA 59.170 52.381 0.00 0.00 0.00 2.92
704 754 2.435069 CTCACAGCAAGAGGGAGATCAT 59.565 50.000 0.00 0.00 0.00 2.45
706 756 2.093075 CACAGCAAGAGGGAGATCATGT 60.093 50.000 0.00 0.00 0.00 3.21
707 757 3.133542 CACAGCAAGAGGGAGATCATGTA 59.866 47.826 0.00 0.00 0.00 2.29
759 822 2.971660 TGAACAGTCTGAACACCGAA 57.028 45.000 6.91 0.00 0.00 4.30
888 955 4.232061 CCAACCCCAACCCCAGCA 62.232 66.667 0.00 0.00 0.00 4.41
956 1040 1.566211 CTCTCACCCTCATCACCACT 58.434 55.000 0.00 0.00 0.00 4.00
1380 1486 1.251527 ACCTCATCGACTTCGCCACT 61.252 55.000 0.00 0.00 39.60 4.00
1434 1546 3.748027 GCTCATCCATCTCCTCATGCTTT 60.748 47.826 0.00 0.00 0.00 3.51
1435 1547 4.504514 GCTCATCCATCTCCTCATGCTTTA 60.505 45.833 0.00 0.00 0.00 1.85
1436 1548 5.224821 TCATCCATCTCCTCATGCTTTAG 57.775 43.478 0.00 0.00 0.00 1.85
1437 1549 4.657504 TCATCCATCTCCTCATGCTTTAGT 59.342 41.667 0.00 0.00 0.00 2.24
1440 1552 5.188434 TCCATCTCCTCATGCTTTAGTTTG 58.812 41.667 0.00 0.00 0.00 2.93
1441 1553 4.337555 CCATCTCCTCATGCTTTAGTTTGG 59.662 45.833 0.00 0.00 0.00 3.28
1444 1556 6.121776 TCTCCTCATGCTTTAGTTTGGTAA 57.878 37.500 0.00 0.00 0.00 2.85
1445 1557 6.539173 TCTCCTCATGCTTTAGTTTGGTAAA 58.461 36.000 0.00 0.00 0.00 2.01
1446 1558 6.430000 TCTCCTCATGCTTTAGTTTGGTAAAC 59.570 38.462 0.00 0.00 41.69 2.01
1449 1561 6.808212 CCTCATGCTTTAGTTTGGTAAACATG 59.192 38.462 7.13 0.00 43.79 3.21
1450 1562 6.155827 TCATGCTTTAGTTTGGTAAACATGC 58.844 36.000 7.13 5.89 43.79 4.06
1462 1591 4.394920 TGGTAAACATGCTTACTGCTTAGC 59.605 41.667 16.43 0.00 43.37 3.09
1517 1648 4.551702 TGCGAGCATATGTTATACCCAT 57.448 40.909 4.29 0.00 0.00 4.00
1522 1653 6.918569 GCGAGCATATGTTATACCCATAGTAG 59.081 42.308 4.29 0.00 33.42 2.57
1545 1676 9.609950 GTAGTAGTAGTAGTACATGCTAAATGC 57.390 37.037 15.89 0.00 37.32 3.56
1566 1701 0.101939 GATCCGGGTCGTGTAGGAAC 59.898 60.000 0.00 0.00 36.25 3.62
1570 1705 0.528924 CGGGTCGTGTAGGAACATGA 59.471 55.000 0.00 0.00 46.92 3.07
1583 1718 6.942005 TGTAGGAACATGAATCACAAGTGAAT 59.058 34.615 7.02 0.00 43.58 2.57
1629 1796 6.913673 TGCTAATTAACTTCAAACACGAAACC 59.086 34.615 0.00 0.00 0.00 3.27
1644 1811 4.858692 CACGAAACCTTGATGGCATTTTAG 59.141 41.667 0.00 0.88 40.22 1.85
1650 1817 6.949352 ACCTTGATGGCATTTTAGATGTAG 57.051 37.500 0.00 0.00 40.22 2.74
1696 1928 7.643123 ACCAGAGAAATGTTTGGGAGTATTAT 58.357 34.615 0.00 0.00 34.99 1.28
1718 1950 1.095600 GTTTCTTGGGCGGAAGATCC 58.904 55.000 0.00 0.00 31.98 3.36
1790 2024 4.264614 ACGAATTTTGCGTGAGACGTATAG 59.735 41.667 0.00 0.00 44.73 1.31
1791 2025 4.497966 CGAATTTTGCGTGAGACGTATAGA 59.502 41.667 0.00 0.00 44.73 1.98
1792 2026 5.173312 CGAATTTTGCGTGAGACGTATAGAT 59.827 40.000 0.00 0.00 44.73 1.98
1793 2027 5.890110 ATTTTGCGTGAGACGTATAGATG 57.110 39.130 0.00 0.00 44.73 2.90
1801 2035 5.462405 GTGAGACGTATAGATGGATGGAAC 58.538 45.833 0.00 0.00 0.00 3.62
1888 2122 2.625314 TGAATGCGAAAAACATGTCCCA 59.375 40.909 0.00 0.00 0.00 4.37
1891 2125 3.090952 TGCGAAAAACATGTCCCAAAG 57.909 42.857 0.00 0.00 0.00 2.77
1897 2131 5.912955 CGAAAAACATGTCCCAAAGTACTTC 59.087 40.000 8.95 0.00 0.00 3.01
1905 2139 4.001652 GTCCCAAAGTACTTCAGTTAGCC 58.998 47.826 8.95 0.00 0.00 3.93
1910 2144 5.181433 CCAAAGTACTTCAGTTAGCCCTTTC 59.819 44.000 8.95 0.00 0.00 2.62
1914 2148 6.602278 AGTACTTCAGTTAGCCCTTTCTTTT 58.398 36.000 0.00 0.00 0.00 2.27
1915 2149 6.711194 AGTACTTCAGTTAGCCCTTTCTTTTC 59.289 38.462 0.00 0.00 0.00 2.29
1918 2152 6.263392 ACTTCAGTTAGCCCTTTCTTTTCTTC 59.737 38.462 0.00 0.00 0.00 2.87
1922 2161 5.765677 AGTTAGCCCTTTCTTTTCTTCTGTC 59.234 40.000 0.00 0.00 0.00 3.51
1924 2163 2.879026 GCCCTTTCTTTTCTTCTGTCGT 59.121 45.455 0.00 0.00 0.00 4.34
1936 2567 9.267096 CTTTTCTTCTGTCGTAGAAATATTTGC 57.733 33.333 5.17 0.00 44.47 3.68
1943 2574 7.981789 TCTGTCGTAGAAATATTTGCTCTTCAT 59.018 33.333 5.17 0.00 39.69 2.57
1946 2577 8.272176 GTCGTAGAAATATTTGCTCTTCATCTG 58.728 37.037 5.17 0.00 39.69 2.90
1948 2579 8.486383 CGTAGAAATATTTGCTCTTCATCTGAG 58.514 37.037 5.17 0.00 34.87 3.35
1951 2582 9.458727 AGAAATATTTGCTCTTCATCTGAGAAA 57.541 29.630 5.17 0.00 33.68 2.52
1957 2588 6.615264 TGCTCTTCATCTGAGAAATAATGC 57.385 37.500 0.00 0.00 33.68 3.56
1958 2589 6.117488 TGCTCTTCATCTGAGAAATAATGCA 58.883 36.000 0.00 0.00 33.68 3.96
1959 2590 6.600427 TGCTCTTCATCTGAGAAATAATGCAA 59.400 34.615 0.00 0.00 33.68 4.08
1960 2591 7.121611 TGCTCTTCATCTGAGAAATAATGCAAA 59.878 33.333 0.00 0.00 33.68 3.68
1961 2592 7.972277 GCTCTTCATCTGAGAAATAATGCAAAA 59.028 33.333 0.00 0.00 33.68 2.44
1962 2593 9.286946 CTCTTCATCTGAGAAATAATGCAAAAC 57.713 33.333 0.00 0.00 33.68 2.43
1973 2636 1.212490 TGCAAAACGCTATGCAGCC 59.788 52.632 5.60 0.00 46.87 4.85
1987 2650 1.742831 TGCAGCCGTGATAATCAAACC 59.257 47.619 0.00 0.00 0.00 3.27
2000 2663 9.620660 GTGATAATCAAACCGAGTAAAATGTTT 57.379 29.630 0.00 0.00 0.00 2.83
2001 2664 9.619316 TGATAATCAAACCGAGTAAAATGTTTG 57.381 29.630 7.45 7.45 45.47 2.93
2020 2683 9.713713 AATGTTTGCGGGTAAAAATATTTTAGT 57.286 25.926 13.68 2.39 0.00 2.24
2052 2715 2.682856 TCAAAAGATGATTAGCACGGCC 59.317 45.455 0.00 0.00 31.50 6.13
2053 2716 1.299541 AAAGATGATTAGCACGGCCG 58.700 50.000 26.86 26.86 0.00 6.13
2054 2717 0.532862 AAGATGATTAGCACGGCCGG 60.533 55.000 31.76 19.49 0.00 6.13
2055 2718 1.227556 GATGATTAGCACGGCCGGT 60.228 57.895 31.76 16.26 0.00 5.28
2056 2719 0.032952 GATGATTAGCACGGCCGGTA 59.967 55.000 31.76 15.11 0.00 4.02
2057 2720 0.033504 ATGATTAGCACGGCCGGTAG 59.966 55.000 31.76 19.77 0.00 3.18
2059 2722 0.596859 GATTAGCACGGCCGGTAGAC 60.597 60.000 31.76 13.48 0.00 2.59
2060 2723 2.345880 ATTAGCACGGCCGGTAGACG 62.346 60.000 31.76 11.19 43.80 4.18
2071 2734 1.625616 CGGTAGACGGTGCTAACAAG 58.374 55.000 0.00 0.00 39.42 3.16
2072 2735 1.734707 CGGTAGACGGTGCTAACAAGG 60.735 57.143 0.00 0.00 39.42 3.61
2073 2736 1.356938 GTAGACGGTGCTAACAAGGC 58.643 55.000 0.00 0.00 0.00 4.35
2074 2737 1.067071 GTAGACGGTGCTAACAAGGCT 60.067 52.381 0.00 0.00 0.00 4.58
2075 2738 0.037232 AGACGGTGCTAACAAGGCTC 60.037 55.000 0.00 0.00 0.00 4.70
2076 2739 0.320421 GACGGTGCTAACAAGGCTCA 60.320 55.000 0.00 0.00 0.00 4.26
2077 2740 0.602905 ACGGTGCTAACAAGGCTCAC 60.603 55.000 0.00 0.00 0.00 3.51
2078 2741 0.602638 CGGTGCTAACAAGGCTCACA 60.603 55.000 4.45 0.00 0.00 3.58
2081 2744 2.360801 GGTGCTAACAAGGCTCACAAAA 59.639 45.455 4.45 0.00 0.00 2.44
2092 2755 3.132646 AGGCTCACAAAAGATGCAAACAA 59.867 39.130 0.00 0.00 0.00 2.83
2093 2756 3.492011 GGCTCACAAAAGATGCAAACAAG 59.508 43.478 0.00 0.00 0.00 3.16
2097 2763 6.645700 TCACAAAAGATGCAAACAAGAAAC 57.354 33.333 0.00 0.00 0.00 2.78
2099 2765 6.648310 TCACAAAAGATGCAAACAAGAAACAA 59.352 30.769 0.00 0.00 0.00 2.83
2100 2766 6.957077 CACAAAAGATGCAAACAAGAAACAAG 59.043 34.615 0.00 0.00 0.00 3.16
2104 2770 3.143807 TGCAAACAAGAAACAAGTCCG 57.856 42.857 0.00 0.00 0.00 4.79
2105 2771 2.750166 TGCAAACAAGAAACAAGTCCGA 59.250 40.909 0.00 0.00 0.00 4.55
2106 2772 3.181501 TGCAAACAAGAAACAAGTCCGAG 60.182 43.478 0.00 0.00 0.00 4.63
2109 2775 0.512952 CAAGAAACAAGTCCGAGCCG 59.487 55.000 0.00 0.00 0.00 5.52
2128 2794 2.411904 CGGATTAGGCAGAGCTTCATC 58.588 52.381 0.00 0.00 0.00 2.92
2133 2799 6.058183 GGATTAGGCAGAGCTTCATCTAAAA 58.942 40.000 0.00 0.00 0.00 1.52
2134 2800 6.204495 GGATTAGGCAGAGCTTCATCTAAAAG 59.796 42.308 0.00 0.00 0.00 2.27
2136 2802 4.916183 AGGCAGAGCTTCATCTAAAAGTT 58.084 39.130 0.00 0.00 0.00 2.66
2140 2812 6.127786 GGCAGAGCTTCATCTAAAAGTTGAAT 60.128 38.462 0.00 0.00 34.52 2.57
2155 2827 5.446143 AGTTGAATGCAATTAAACCGTGA 57.554 34.783 0.00 0.00 46.86 4.35
2156 2828 5.460646 AGTTGAATGCAATTAAACCGTGAG 58.539 37.500 0.00 0.00 46.86 3.51
2173 2845 5.638596 CGTGAGGCCCTAAAGTTAATTTT 57.361 39.130 0.00 1.35 32.01 1.82
2174 2846 5.637809 CGTGAGGCCCTAAAGTTAATTTTC 58.362 41.667 0.00 0.00 32.01 2.29
2176 2848 6.127730 CGTGAGGCCCTAAAGTTAATTTTCAT 60.128 38.462 0.00 0.00 32.01 2.57
2177 2849 7.066525 CGTGAGGCCCTAAAGTTAATTTTCATA 59.933 37.037 0.00 0.00 32.01 2.15
2178 2850 8.745590 GTGAGGCCCTAAAGTTAATTTTCATAA 58.254 33.333 0.00 0.00 32.01 1.90
2179 2851 8.966868 TGAGGCCCTAAAGTTAATTTTCATAAG 58.033 33.333 0.00 0.00 32.01 1.73
2180 2852 7.782049 AGGCCCTAAAGTTAATTTTCATAAGC 58.218 34.615 0.00 0.00 32.01 3.09
2181 2853 7.619698 AGGCCCTAAAGTTAATTTTCATAAGCT 59.380 33.333 0.00 0.00 32.01 3.74
2182 2854 7.706607 GGCCCTAAAGTTAATTTTCATAAGCTG 59.293 37.037 0.00 0.00 32.01 4.24
2183 2855 8.251026 GCCCTAAAGTTAATTTTCATAAGCTGT 58.749 33.333 0.00 0.00 32.01 4.40
2184 2856 9.788960 CCCTAAAGTTAATTTTCATAAGCTGTC 57.211 33.333 0.00 0.00 32.01 3.51
2189 2861 9.559958 AAGTTAATTTTCATAAGCTGTCATTCG 57.440 29.630 0.00 0.00 0.00 3.34
2190 2862 8.946085 AGTTAATTTTCATAAGCTGTCATTCGA 58.054 29.630 0.00 0.00 0.00 3.71
2191 2863 9.554724 GTTAATTTTCATAAGCTGTCATTCGAA 57.445 29.630 0.00 0.00 0.00 3.71
2194 2866 8.847444 ATTTTCATAAGCTGTCATTCGAAATC 57.153 30.769 0.00 0.00 0.00 2.17
2195 2867 6.983474 TTCATAAGCTGTCATTCGAAATCA 57.017 33.333 0.00 1.03 0.00 2.57
2196 2868 6.594284 TCATAAGCTGTCATTCGAAATCAG 57.406 37.500 17.32 17.32 0.00 2.90
2197 2869 5.525012 TCATAAGCTGTCATTCGAAATCAGG 59.475 40.000 20.65 7.66 0.00 3.86
2198 2870 3.340814 AGCTGTCATTCGAAATCAGGT 57.659 42.857 19.07 19.07 33.09 4.00
2200 2872 4.437239 AGCTGTCATTCGAAATCAGGTAG 58.563 43.478 21.54 9.03 35.57 3.18
2201 2873 4.081420 AGCTGTCATTCGAAATCAGGTAGT 60.081 41.667 21.54 0.00 35.57 2.73
2213 2885 7.929785 TCGAAATCAGGTAGTACAGAAAAGTTT 59.070 33.333 2.06 0.00 0.00 2.66
2214 2886 8.557029 CGAAATCAGGTAGTACAGAAAAGTTTT 58.443 33.333 0.00 0.00 0.00 2.43
2217 2889 7.562454 TCAGGTAGTACAGAAAAGTTTTTGG 57.438 36.000 1.64 0.83 0.00 3.28
2221 2893 7.069455 AGGTAGTACAGAAAAGTTTTTGGCATT 59.931 33.333 1.64 0.00 0.00 3.56
2224 2896 7.973601 AGTACAGAAAAGTTTTTGGCATTTTG 58.026 30.769 1.64 0.00 0.00 2.44
2228 2900 4.979943 AAAGTTTTTGGCATTTTGGGTG 57.020 36.364 0.00 0.00 0.00 4.61
2231 2903 4.593956 AGTTTTTGGCATTTTGGGTGAAA 58.406 34.783 0.00 0.00 0.00 2.69
2254 2940 4.957759 AGACAACCAACAAAGTACACAC 57.042 40.909 0.00 0.00 0.00 3.82
2262 2948 4.384846 CCAACAAAGTACACACGTAGCTAG 59.615 45.833 0.00 0.00 0.00 3.42
2263 2949 3.572584 ACAAAGTACACACGTAGCTAGC 58.427 45.455 6.62 6.62 0.00 3.42
2266 2952 1.743958 AGTACACACGTAGCTAGCTGG 59.256 52.381 27.68 20.06 0.00 4.85
2273 2959 3.446161 ACACGTAGCTAGCTGGTTGAATA 59.554 43.478 27.68 0.85 0.00 1.75
2274 2960 4.099573 ACACGTAGCTAGCTGGTTGAATAT 59.900 41.667 27.68 0.00 0.00 1.28
2275 2961 5.301045 ACACGTAGCTAGCTGGTTGAATATA 59.699 40.000 27.68 0.00 0.00 0.86
2865 5589 3.499918 AGGCTTCTTCTGAATTTCACACG 59.500 43.478 0.00 0.00 0.00 4.49
2915 5639 5.304686 ACATCAGGTGACAGGTTTAGAAA 57.695 39.130 0.00 0.00 0.00 2.52
3045 5770 2.502947 AGTGCCTAGCTCACATGAATCA 59.497 45.455 0.00 0.00 36.93 2.57
3342 6082 4.062293 CGACAATCCAAACCACTTACAGA 58.938 43.478 0.00 0.00 0.00 3.41
3521 6273 3.732212 CCTCATAATGGTCATCAAGCGA 58.268 45.455 0.00 0.00 0.00 4.93
3789 6556 4.081198 TCCAAAATGCCTCTCTCTCTCTTC 60.081 45.833 0.00 0.00 0.00 2.87
3803 6570 6.051717 TCTCTCTCTTCCAACTTTTCTGTTG 58.948 40.000 0.00 0.00 44.81 3.33
3804 6571 4.576463 TCTCTCTTCCAACTTTTCTGTTGC 59.424 41.667 0.00 0.00 44.12 4.17
3805 6572 4.269183 TCTCTTCCAACTTTTCTGTTGCA 58.731 39.130 0.00 0.00 44.12 4.08
3821 6588 2.543777 TGCACAACTACTCTTCCACC 57.456 50.000 0.00 0.00 0.00 4.61
3850 6626 7.823665 TGTTATACGGCTACATATACCAGAAG 58.176 38.462 0.00 0.00 0.00 2.85
3859 6635 8.053963 GGCTACATATACCAGAAGGAGAGTATA 58.946 40.741 0.00 0.00 38.69 1.47
3862 6638 7.704727 ACATATACCAGAAGGAGAGTATAGCT 58.295 38.462 0.00 0.00 38.69 3.32
3868 6644 4.217550 CAGAAGGAGAGTATAGCTAGTGGC 59.782 50.000 0.00 0.00 42.19 5.01
3879 6655 2.301577 GCTAGTGGCTCGTTGAGATT 57.698 50.000 0.00 0.00 38.06 2.40
3882 6658 3.437049 GCTAGTGGCTCGTTGAGATTTTT 59.563 43.478 0.00 0.00 38.06 1.94
3914 6690 3.724508 TTTTTGCGAAAGGCTCATTGA 57.275 38.095 0.00 0.00 44.05 2.57
3915 6691 2.995466 TTTGCGAAAGGCTCATTGAG 57.005 45.000 9.40 9.40 44.05 3.02
3916 6692 2.183478 TTGCGAAAGGCTCATTGAGA 57.817 45.000 17.87 0.00 44.05 3.27
3917 6693 2.183478 TGCGAAAGGCTCATTGAGAA 57.817 45.000 17.87 0.00 44.05 2.87
3918 6694 2.503331 TGCGAAAGGCTCATTGAGAAA 58.497 42.857 17.87 0.00 44.05 2.52
3919 6695 3.084039 TGCGAAAGGCTCATTGAGAAAT 58.916 40.909 17.87 0.00 44.05 2.17
3920 6696 3.507233 TGCGAAAGGCTCATTGAGAAATT 59.493 39.130 17.87 7.75 44.05 1.82
3921 6697 4.022068 TGCGAAAGGCTCATTGAGAAATTT 60.022 37.500 17.87 12.93 44.05 1.82
3922 6698 4.325472 GCGAAAGGCTCATTGAGAAATTTG 59.675 41.667 17.87 11.73 39.11 2.32
3923 6699 4.860907 CGAAAGGCTCATTGAGAAATTTGG 59.139 41.667 17.87 10.81 0.00 3.28
3924 6700 5.565439 CGAAAGGCTCATTGAGAAATTTGGT 60.565 40.000 17.87 0.00 0.00 3.67
3925 6701 6.349280 CGAAAGGCTCATTGAGAAATTTGGTA 60.349 38.462 17.87 0.00 0.00 3.25
3926 6702 7.486407 AAAGGCTCATTGAGAAATTTGGTAT 57.514 32.000 17.87 0.00 0.00 2.73
3927 6703 8.593945 AAAGGCTCATTGAGAAATTTGGTATA 57.406 30.769 17.87 0.00 0.00 1.47
3928 6704 7.814264 AGGCTCATTGAGAAATTTGGTATAG 57.186 36.000 17.87 0.00 0.00 1.31
3930 6706 8.223330 AGGCTCATTGAGAAATTTGGTATAGAT 58.777 33.333 17.87 0.00 0.00 1.98
3947 6723 8.382405 TGGTATAGATATATGGCTCAAGCAAAA 58.618 33.333 4.13 0.00 44.36 2.44
3961 6737 4.825085 TCAAGCAAAACGAAATTACTCCCT 59.175 37.500 0.00 0.00 0.00 4.20
3962 6738 5.998981 TCAAGCAAAACGAAATTACTCCCTA 59.001 36.000 0.00 0.00 0.00 3.53
3963 6739 5.874895 AGCAAAACGAAATTACTCCCTAC 57.125 39.130 0.00 0.00 0.00 3.18
3964 6740 4.698780 AGCAAAACGAAATTACTCCCTACC 59.301 41.667 0.00 0.00 0.00 3.18
3968 6744 3.036819 ACGAAATTACTCCCTACCTCCC 58.963 50.000 0.00 0.00 0.00 4.30
3969 6745 2.367894 CGAAATTACTCCCTACCTCCCC 59.632 54.545 0.00 0.00 0.00 4.81
3970 6746 3.390819 GAAATTACTCCCTACCTCCCCA 58.609 50.000 0.00 0.00 0.00 4.96
3987 6815 2.841044 ATACCCGTACCTGCCCCG 60.841 66.667 0.00 0.00 0.00 5.73
4005 6833 1.758862 CCGGTCCCTCCTTTAATACGT 59.241 52.381 0.00 0.00 0.00 3.57
4007 6835 3.192466 CGGTCCCTCCTTTAATACGTTG 58.808 50.000 0.00 0.00 0.00 4.10
4013 6844 3.621715 CCTCCTTTAATACGTTGCCAGTC 59.378 47.826 0.00 0.00 0.00 3.51
4037 6868 1.030488 CCAGCTGCCACCAATCAGAG 61.030 60.000 8.66 0.00 32.26 3.35
4042 6876 0.253044 TGCCACCAATCAGAGTAGCC 59.747 55.000 0.00 0.00 0.00 3.93
4067 6901 9.800433 CCATCAATGTTGCATTAACTTTGTATA 57.200 29.630 12.65 0.00 46.44 1.47
4094 6943 6.384305 ACAGAGTAGTTTAATGGGAGCAGTAT 59.616 38.462 0.00 0.00 0.00 2.12
4095 6944 7.563924 ACAGAGTAGTTTAATGGGAGCAGTATA 59.436 37.037 0.00 0.00 0.00 1.47
4097 6946 8.989131 AGAGTAGTTTAATGGGAGCAGTATAAA 58.011 33.333 0.00 0.00 0.00 1.40
4098 6947 8.959705 AGTAGTTTAATGGGAGCAGTATAAAC 57.040 34.615 0.00 0.00 0.00 2.01
4099 6948 8.769359 AGTAGTTTAATGGGAGCAGTATAAACT 58.231 33.333 11.88 11.88 39.12 2.66
4113 6962 6.388435 AGTATAAACTGGTGAGTATCGGAC 57.612 41.667 0.00 0.00 33.35 4.79
4114 6963 4.667519 ATAAACTGGTGAGTATCGGACC 57.332 45.455 0.00 0.00 38.61 4.46
4115 6964 1.192428 AACTGGTGAGTATCGGACCC 58.808 55.000 0.00 0.00 38.61 4.46
4117 6966 1.735376 CTGGTGAGTATCGGACCCGG 61.735 65.000 8.73 0.00 38.61 5.73
4118 6967 2.416260 GTGAGTATCGGACCCGGC 59.584 66.667 8.73 0.12 38.61 6.13
4121 6970 1.046472 TGAGTATCGGACCCGGCATT 61.046 55.000 8.73 0.00 38.61 3.56
4122 6971 0.963962 GAGTATCGGACCCGGCATTA 59.036 55.000 8.73 0.00 40.25 1.90
4123 6972 1.549170 GAGTATCGGACCCGGCATTAT 59.451 52.381 8.73 0.00 40.25 1.28
4135 7119 2.612972 CCGGCATTATCTGATTAGGCGT 60.613 50.000 21.45 0.00 42.41 5.68
4139 7123 5.665459 GGCATTATCTGATTAGGCGTATCT 58.335 41.667 7.13 0.00 0.00 1.98
4140 7124 5.521735 GGCATTATCTGATTAGGCGTATCTG 59.478 44.000 7.13 3.79 0.00 2.90
4178 7173 0.252197 GAATTAGTGAGTGGGGGCGT 59.748 55.000 0.00 0.00 0.00 5.68
4192 7187 1.523032 GGCGTCCCGGAAGTTATGG 60.523 63.158 0.73 0.00 0.00 2.74
4196 7191 0.106149 GTCCCGGAAGTTATGGCGAT 59.894 55.000 0.73 0.00 0.00 4.58
4240 7235 4.426313 GGGAGGTTTCGGCTGGGG 62.426 72.222 0.00 0.00 0.00 4.96
4241 7236 3.647771 GGAGGTTTCGGCTGGGGT 61.648 66.667 0.00 0.00 0.00 4.95
4242 7237 2.295602 GGAGGTTTCGGCTGGGGTA 61.296 63.158 0.00 0.00 0.00 3.69
4243 7238 1.078637 GAGGTTTCGGCTGGGGTAC 60.079 63.158 0.00 0.00 0.00 3.34
4420 7472 2.203070 GCCGCTGGATGGATCGTT 60.203 61.111 0.00 0.00 0.00 3.85
4438 7627 0.881118 TTGGCGAGAAAATGCAGGTC 59.119 50.000 0.00 0.00 0.00 3.85
5658 8850 2.509336 CATGGACGCCTGACCGAC 60.509 66.667 0.00 0.00 32.08 4.79
5718 8914 1.682854 AGGTAAAGGAACACGTCGTCA 59.317 47.619 0.00 0.00 0.00 4.35
5959 9163 6.154203 TGTGCAATTTCATTACTTTGGACA 57.846 33.333 4.99 4.99 44.56 4.02
5973 9177 5.445964 ACTTTGGACATTGGACTACTGTTT 58.554 37.500 0.00 0.00 0.00 2.83
5974 9178 6.597562 ACTTTGGACATTGGACTACTGTTTA 58.402 36.000 0.00 0.00 0.00 2.01
5975 9179 7.057894 ACTTTGGACATTGGACTACTGTTTAA 58.942 34.615 0.00 0.00 0.00 1.52
5976 9180 7.228706 ACTTTGGACATTGGACTACTGTTTAAG 59.771 37.037 0.00 0.00 0.00 1.85
5978 9182 6.228258 TGGACATTGGACTACTGTTTAAGAC 58.772 40.000 0.00 0.00 0.00 3.01
5979 9183 6.042781 TGGACATTGGACTACTGTTTAAGACT 59.957 38.462 0.00 0.00 0.00 3.24
5981 9185 7.444487 GGACATTGGACTACTGTTTAAGACTTT 59.556 37.037 0.00 0.00 0.00 2.66
5982 9186 9.485206 GACATTGGACTACTGTTTAAGACTTTA 57.515 33.333 0.00 0.00 0.00 1.85
6046 9271 8.427902 TCATATGTAAATCATCTACTGCCTCT 57.572 34.615 1.90 0.00 37.91 3.69
6049 9274 6.299805 TGTAAATCATCTACTGCCTCTGTT 57.700 37.500 0.00 0.00 0.00 3.16
6050 9275 6.711277 TGTAAATCATCTACTGCCTCTGTTT 58.289 36.000 0.00 0.00 0.00 2.83
6056 9281 6.341316 TCATCTACTGCCTCTGTTTCATAAC 58.659 40.000 0.00 0.00 34.75 1.89
6064 9289 6.170506 TGCCTCTGTTTCATAACGTAAGAAT 58.829 36.000 0.00 0.00 43.62 2.40
6067 9292 7.674240 GCCTCTGTTTCATAACGTAAGAATGTC 60.674 40.741 0.00 0.00 43.62 3.06
6084 9309 5.623956 AATGTCTTACATTATGGGACGGA 57.376 39.130 3.51 0.00 46.11 4.69
6085 9310 5.825593 ATGTCTTACATTATGGGACGGAT 57.174 39.130 0.00 0.00 34.67 4.18
6086 9311 4.956085 TGTCTTACATTATGGGACGGATG 58.044 43.478 0.00 0.00 0.00 3.51
6087 9312 4.202315 TGTCTTACATTATGGGACGGATGG 60.202 45.833 0.00 0.00 0.00 3.51
6088 9313 4.039973 GTCTTACATTATGGGACGGATGGA 59.960 45.833 0.00 0.00 0.00 3.41
6089 9314 4.283467 TCTTACATTATGGGACGGATGGAG 59.717 45.833 0.00 0.00 0.00 3.86
6090 9315 1.072331 ACATTATGGGACGGATGGAGC 59.928 52.381 0.00 0.00 0.00 4.70
6091 9316 1.072173 CATTATGGGACGGATGGAGCA 59.928 52.381 0.00 0.00 0.00 4.26
6092 9317 1.434188 TTATGGGACGGATGGAGCAT 58.566 50.000 0.00 0.00 0.00 3.79
6093 9318 2.319025 TATGGGACGGATGGAGCATA 57.681 50.000 0.00 0.00 0.00 3.14
6094 9319 0.687354 ATGGGACGGATGGAGCATAC 59.313 55.000 0.00 0.00 0.00 2.39
6095 9320 0.398522 TGGGACGGATGGAGCATACT 60.399 55.000 0.00 0.00 0.00 2.12
6096 9321 1.133294 TGGGACGGATGGAGCATACTA 60.133 52.381 0.00 0.00 0.00 1.82
6097 9322 1.272769 GGGACGGATGGAGCATACTAC 59.727 57.143 0.00 0.00 0.00 2.73
6098 9323 2.240279 GGACGGATGGAGCATACTACT 58.760 52.381 0.00 0.00 0.00 2.57
6099 9324 3.418995 GGACGGATGGAGCATACTACTA 58.581 50.000 0.00 0.00 0.00 1.82
6100 9325 3.825014 GGACGGATGGAGCATACTACTAA 59.175 47.826 0.00 0.00 0.00 2.24
6101 9326 4.463186 GGACGGATGGAGCATACTACTAAT 59.537 45.833 0.00 0.00 0.00 1.73
6102 9327 5.047235 GGACGGATGGAGCATACTACTAATT 60.047 44.000 0.00 0.00 0.00 1.40
6103 9328 6.152323 GGACGGATGGAGCATACTACTAATTA 59.848 42.308 0.00 0.00 0.00 1.40
6104 9329 6.921914 ACGGATGGAGCATACTACTAATTAC 58.078 40.000 0.00 0.00 0.00 1.89
6105 9330 6.720288 ACGGATGGAGCATACTACTAATTACT 59.280 38.462 0.00 0.00 0.00 2.24
6106 9331 7.094291 ACGGATGGAGCATACTACTAATTACTC 60.094 40.741 0.00 0.00 0.00 2.59
6107 9332 7.548967 GGATGGAGCATACTACTAATTACTCC 58.451 42.308 7.30 7.30 42.26 3.85
6109 9334 7.526142 TGGAGCATACTACTAATTACTCCAG 57.474 40.000 11.27 0.00 45.59 3.86
6110 9335 6.493802 TGGAGCATACTACTAATTACTCCAGG 59.506 42.308 11.27 0.00 45.59 4.45
6111 9336 6.720288 GGAGCATACTACTAATTACTCCAGGA 59.280 42.308 8.78 0.00 41.68 3.86
6112 9337 7.094118 GGAGCATACTACTAATTACTCCAGGAG 60.094 44.444 15.72 15.72 41.68 3.69
6113 9338 6.209788 AGCATACTACTAATTACTCCAGGAGC 59.790 42.308 17.31 0.00 32.04 4.70
6114 9339 6.613233 CATACTACTAATTACTCCAGGAGCG 58.387 44.000 17.31 0.00 32.04 5.03
6138 9363 3.562973 AGCATTTGAGTAAGATGATGCCG 59.437 43.478 0.00 0.00 40.41 5.69
6140 9365 2.689553 TTGAGTAAGATGATGCCGCA 57.310 45.000 0.00 0.00 0.00 5.69
6163 9398 6.205658 GCAAGAGTAGATCTTTTCCTGTGTTT 59.794 38.462 0.00 0.00 46.49 2.83
6171 9406 6.429385 AGATCTTTTCCTGTGTTTCATGTCTC 59.571 38.462 0.00 0.00 0.00 3.36
6172 9407 5.436175 TCTTTTCCTGTGTTTCATGTCTCA 58.564 37.500 0.00 0.00 0.00 3.27
6180 9415 3.431572 GTGTTTCATGTCTCAGTGCTCTC 59.568 47.826 0.00 0.00 0.00 3.20
6181 9416 2.999355 GTTTCATGTCTCAGTGCTCTCC 59.001 50.000 0.00 0.00 0.00 3.71
6190 9425 2.759535 CTCAGTGCTCTCCTCTTGATCA 59.240 50.000 0.00 0.00 0.00 2.92
6206 9441 9.495572 CCTCTTGATCAATAACTCTATTAACCC 57.504 37.037 8.96 0.00 0.00 4.11
6211 9446 7.656137 TGATCAATAACTCTATTAACCCGCTTC 59.344 37.037 0.00 0.00 0.00 3.86
6249 9484 4.415881 AAAAATCTTTGGCCTCGGTTTT 57.584 36.364 3.32 4.51 0.00 2.43
6251 9486 4.783764 AAATCTTTGGCCTCGGTTTTAG 57.216 40.909 3.32 0.00 0.00 1.85
6257 9492 6.005198 TCTTTGGCCTCGGTTTTAGAAAATA 58.995 36.000 3.32 0.00 0.00 1.40
6258 9493 6.490721 TCTTTGGCCTCGGTTTTAGAAAATAA 59.509 34.615 3.32 0.00 0.00 1.40
6259 9494 6.651975 TTGGCCTCGGTTTTAGAAAATAAA 57.348 33.333 3.32 0.00 0.00 1.40
6283 9518 7.770801 AAAAGAACCAAATGTTACAAGAAGC 57.229 32.000 0.00 0.00 37.29 3.86
6286 9521 5.594317 AGAACCAAATGTTACAAGAAGCACT 59.406 36.000 0.00 0.00 37.29 4.40
6287 9522 5.438761 ACCAAATGTTACAAGAAGCACTC 57.561 39.130 0.00 0.00 0.00 3.51
6289 9524 6.296026 ACCAAATGTTACAAGAAGCACTCTA 58.704 36.000 0.00 0.00 32.46 2.43
6291 9526 8.100791 ACCAAATGTTACAAGAAGCACTCTATA 58.899 33.333 0.00 0.00 32.46 1.31
6293 9528 9.926751 CAAATGTTACAAGAAGCACTCTATATG 57.073 33.333 0.00 0.00 32.46 1.78
6294 9529 9.672673 AAATGTTACAAGAAGCACTCTATATGT 57.327 29.630 0.00 0.00 32.46 2.29
6295 9530 9.672673 AATGTTACAAGAAGCACTCTATATGTT 57.327 29.630 0.00 0.00 32.46 2.71
6327 9586 4.849111 TGCGGTTTTGTTTCATGTTTTC 57.151 36.364 0.00 0.00 0.00 2.29
6340 9599 9.269453 TGTTTCATGTTTTCATTATTGCATCAA 57.731 25.926 0.00 0.00 38.64 2.57
6341 9600 9.749490 GTTTCATGTTTTCATTATTGCATCAAG 57.251 29.630 0.00 0.00 38.64 3.02
6436 9696 2.158885 GGGAGGATGAAAGGAGTAGTGC 60.159 54.545 0.00 0.00 0.00 4.40
6441 9701 2.024176 TGAAAGGAGTAGTGCTGGGA 57.976 50.000 0.00 0.00 0.00 4.37
6442 9702 2.334977 TGAAAGGAGTAGTGCTGGGAA 58.665 47.619 0.00 0.00 0.00 3.97
6459 9719 2.893489 GGGAAGACACCTGCTTTTGAAT 59.107 45.455 0.00 0.00 0.00 2.57
6460 9720 3.305608 GGGAAGACACCTGCTTTTGAATG 60.306 47.826 0.00 0.00 0.00 2.67
6462 9722 4.518970 GGAAGACACCTGCTTTTGAATGTA 59.481 41.667 0.00 0.00 0.00 2.29
6463 9723 5.009610 GGAAGACACCTGCTTTTGAATGTAA 59.990 40.000 0.00 0.00 0.00 2.41
6493 9755 2.550639 CCCAAATTTCCAACAAGCCAGG 60.551 50.000 0.00 0.00 0.00 4.45
6536 9798 3.823873 CACCAAAAGCCACATGTTACCTA 59.176 43.478 0.00 0.00 0.00 3.08
6538 9800 4.522789 ACCAAAAGCCACATGTTACCTAAG 59.477 41.667 0.00 0.00 0.00 2.18
6539 9801 4.082245 CCAAAAGCCACATGTTACCTAAGG 60.082 45.833 0.00 0.00 0.00 2.69
6583 9845 7.766278 AGCTAAGTAATCAACAAGGTACATCAG 59.234 37.037 0.00 0.00 0.00 2.90
6593 9855 5.316167 ACAAGGTACATCAGAGCAATCAAA 58.684 37.500 0.00 0.00 0.00 2.69
6639 9901 0.172803 CTACCCAGCTACACGACCAC 59.827 60.000 0.00 0.00 0.00 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 1.210967 TGACGAAACCCTGAACTTGGT 59.789 47.619 0.00 0.00 36.06 3.67
19 20 4.014406 AGTTTTTGACGAAACCCTGAACT 58.986 39.130 0.00 0.00 39.71 3.01
26 27 3.507786 AGCAACAGTTTTTGACGAAACC 58.492 40.909 0.00 0.00 39.71 3.27
39 40 3.971245 TTCCAAACCAAAAGCAACAGT 57.029 38.095 0.00 0.00 0.00 3.55
57 58 2.227865 TCAAGGCCTGCGTACAATTTTC 59.772 45.455 5.69 0.00 0.00 2.29
114 115 2.166050 TCCACGAAAATGCATTCCCATG 59.834 45.455 13.38 9.25 0.00 3.66
182 185 0.606401 CCATTGTCAGCGAACCAGGT 60.606 55.000 0.00 0.00 0.00 4.00
226 229 3.810386 GCCTCTTTATTAGGTGTAGCAGC 59.190 47.826 0.00 0.00 36.43 5.25
227 230 4.381411 GGCCTCTTTATTAGGTGTAGCAG 58.619 47.826 0.00 0.00 36.43 4.24
228 231 3.181469 CGGCCTCTTTATTAGGTGTAGCA 60.181 47.826 0.00 0.00 36.43 3.49
312 326 3.670203 GGACGTTATTGATTGCGTGAAG 58.330 45.455 0.00 0.00 37.71 3.02
423 444 4.657814 AGTGTTTATGGGGTGATCTGTT 57.342 40.909 0.00 0.00 0.00 3.16
424 445 5.772393 TTAGTGTTTATGGGGTGATCTGT 57.228 39.130 0.00 0.00 0.00 3.41
426 447 9.762381 TTAATTTTAGTGTTTATGGGGTGATCT 57.238 29.630 0.00 0.00 0.00 2.75
479 503 9.689075 CCGTTGAAATAACAGAATATATATGCG 57.311 33.333 0.00 0.00 0.00 4.73
496 540 4.400529 AAGAGTTTTTGGCCGTTGAAAT 57.599 36.364 0.00 0.00 0.00 2.17
515 564 1.131126 CCTGCCTGTGTGCGATTAAAG 59.869 52.381 0.00 0.00 0.00 1.85
519 568 3.058160 GCCTGCCTGTGTGCGATT 61.058 61.111 0.00 0.00 0.00 3.34
520 569 4.334118 TGCCTGCCTGTGTGCGAT 62.334 61.111 0.00 0.00 0.00 4.58
521 570 4.994471 CTGCCTGCCTGTGTGCGA 62.994 66.667 0.00 0.00 0.00 5.10
522 571 4.994471 TCTGCCTGCCTGTGTGCG 62.994 66.667 0.00 0.00 0.00 5.34
523 572 3.360340 GTCTGCCTGCCTGTGTGC 61.360 66.667 0.00 0.00 0.00 4.57
524 573 1.670406 GAGTCTGCCTGCCTGTGTG 60.670 63.158 0.00 0.00 0.00 3.82
525 574 2.746359 GAGTCTGCCTGCCTGTGT 59.254 61.111 0.00 0.00 0.00 3.72
531 580 1.246056 TGCATTTGGAGTCTGCCTGC 61.246 55.000 0.14 4.40 35.02 4.85
636 686 3.406764 AGCCAAGTAGCTTTTGAGACAG 58.593 45.455 11.10 0.00 41.41 3.51
664 714 2.981302 CTGACATGCTGTCCCGGA 59.019 61.111 0.73 0.00 46.40 5.14
687 737 4.202336 ACATACATGATCTCCCTCTTGCTG 60.202 45.833 0.00 0.00 0.00 4.41
696 746 4.406648 TGGACACACATACATGATCTCC 57.593 45.455 0.00 0.00 0.00 3.71
701 751 3.262915 TGGTCATGGACACACATACATGA 59.737 43.478 0.00 0.00 45.16 3.07
702 752 3.374988 GTGGTCATGGACACACATACATG 59.625 47.826 13.51 0.00 41.44 3.21
703 753 3.264193 AGTGGTCATGGACACACATACAT 59.736 43.478 18.50 0.00 36.73 2.29
704 754 2.637382 AGTGGTCATGGACACACATACA 59.363 45.455 18.50 0.00 36.73 2.29
706 756 3.326297 TCAAGTGGTCATGGACACACATA 59.674 43.478 18.50 3.50 36.73 2.29
707 757 2.106338 TCAAGTGGTCATGGACACACAT 59.894 45.455 18.50 3.61 36.73 3.21
759 822 3.465218 TTGCTTGGGGGCATGGTGT 62.465 57.895 0.00 0.00 42.09 4.16
778 841 2.166254 CAGAGAGGGAAGAGAAGCTCAC 59.834 54.545 0.00 0.00 32.06 3.51
779 842 2.455557 CAGAGAGGGAAGAGAAGCTCA 58.544 52.381 0.00 0.00 32.06 4.26
780 843 1.756538 CCAGAGAGGGAAGAGAAGCTC 59.243 57.143 0.00 0.00 0.00 4.09
785 852 0.325110 CAGGCCAGAGAGGGAAGAGA 60.325 60.000 5.01 0.00 38.09 3.10
790 857 3.569361 AAGCCAGGCCAGAGAGGGA 62.569 63.158 8.22 0.00 38.09 4.20
888 955 2.257409 CTAGGGATGGTGGCGTTGCT 62.257 60.000 0.00 0.00 0.00 3.91
1065 1171 3.760035 GAGAAGGTCGGCGAGCCA 61.760 66.667 32.58 0.00 35.37 4.75
1107 1213 1.374758 CACCGACTGCAGGAAGTCC 60.375 63.158 19.93 0.00 43.09 3.85
1114 1220 0.249868 TTGAGGTTCACCGACTGCAG 60.250 55.000 13.48 13.48 42.08 4.41
1164 1270 4.373116 AGGTACACGCCGTGGCTG 62.373 66.667 22.60 8.78 37.94 4.85
1197 1303 3.792047 CCGCACACCAGCACGATG 61.792 66.667 0.00 0.00 0.00 3.84
1380 1486 3.223710 TTCGTCGGCGGGCTTGTAA 62.224 57.895 10.62 0.00 38.89 2.41
1434 1546 6.249035 GCAGTAAGCATGTTTACCAAACTA 57.751 37.500 23.84 0.00 44.79 2.24
1435 1547 5.121221 GCAGTAAGCATGTTTACCAAACT 57.879 39.130 23.84 8.50 44.79 2.66
1449 1561 6.981559 ACTCTGTAATTAGCTAAGCAGTAAGC 59.018 38.462 23.16 7.51 46.19 3.09
1450 1562 9.672086 CTACTCTGTAATTAGCTAAGCAGTAAG 57.328 37.037 23.16 18.96 0.00 2.34
1462 1591 8.575589 AGATGCAGTGATCTACTCTGTAATTAG 58.424 37.037 0.00 0.00 40.77 1.73
1545 1676 2.719979 CTACACGACCCGGATCGG 59.280 66.667 24.99 14.20 46.56 4.18
1554 1685 4.242475 TGTGATTCATGTTCCTACACGAC 58.758 43.478 0.00 0.00 37.03 4.34
1566 1701 8.991243 ACCAATAAATTCACTTGTGATTCATG 57.009 30.769 4.18 0.00 0.00 3.07
1570 1705 8.877864 TCCTACCAATAAATTCACTTGTGATT 57.122 30.769 4.18 0.00 0.00 2.57
1614 1765 4.290155 CCATCAAGGTTTCGTGTTTGAAG 58.710 43.478 0.00 0.00 33.71 3.02
1616 1767 2.034053 GCCATCAAGGTTTCGTGTTTGA 59.966 45.455 0.00 0.00 40.61 2.69
1619 1770 1.686355 TGCCATCAAGGTTTCGTGTT 58.314 45.000 0.00 0.00 40.61 3.32
1629 1796 9.512435 CTTTTCTACATCTAAAATGCCATCAAG 57.488 33.333 0.00 0.00 0.00 3.02
1650 1817 9.063615 TCTGGTCTAACTTTTTCCATACTTTTC 57.936 33.333 0.00 0.00 0.00 2.29
1672 1890 7.775093 TGATAATACTCCCAAACATTTCTCTGG 59.225 37.037 0.00 0.00 0.00 3.86
1696 1928 0.762418 TCTTCCGCCCAAGAAACTGA 59.238 50.000 0.00 0.00 29.01 3.41
1790 2024 4.664688 ATTCCATAGGGTTCCATCCATC 57.335 45.455 0.00 0.00 34.93 3.51
1791 2025 4.202716 GGAATTCCATAGGGTTCCATCCAT 60.203 45.833 20.04 0.00 37.61 3.41
1792 2026 3.140144 GGAATTCCATAGGGTTCCATCCA 59.860 47.826 20.04 0.00 37.61 3.41
1793 2027 3.500471 GGGAATTCCATAGGGTTCCATCC 60.500 52.174 25.67 7.69 38.61 3.51
1801 2035 0.320771 CGCGAGGGAATTCCATAGGG 60.321 60.000 25.67 21.96 38.24 3.53
1888 2122 6.189036 AGAAAGGGCTAACTGAAGTACTTT 57.811 37.500 10.02 0.00 31.67 2.66
1891 2125 6.711194 AGAAAAGAAAGGGCTAACTGAAGTAC 59.289 38.462 0.00 0.00 0.00 2.73
1897 2131 5.532779 ACAGAAGAAAAGAAAGGGCTAACTG 59.467 40.000 0.00 0.00 0.00 3.16
1905 2139 7.478520 TTTCTACGACAGAAGAAAAGAAAGG 57.521 36.000 0.00 0.00 44.10 3.11
1910 2144 9.267096 GCAAATATTTCTACGACAGAAGAAAAG 57.733 33.333 0.00 0.00 44.10 2.27
1914 2148 7.548097 AGAGCAAATATTTCTACGACAGAAGA 58.452 34.615 0.00 0.00 44.10 2.87
1915 2149 7.763172 AGAGCAAATATTTCTACGACAGAAG 57.237 36.000 0.00 0.00 44.10 2.85
1918 2152 7.525688 TGAAGAGCAAATATTTCTACGACAG 57.474 36.000 0.00 0.00 0.00 3.51
1922 2161 8.357796 TCAGATGAAGAGCAAATATTTCTACG 57.642 34.615 0.00 0.00 0.00 3.51
1932 2563 7.121611 TGCATTATTTCTCAGATGAAGAGCAAA 59.878 33.333 0.00 0.00 33.15 3.68
1936 2567 9.286946 GTTTTGCATTATTTCTCAGATGAAGAG 57.713 33.333 0.00 0.00 34.42 2.85
1946 2577 6.075205 CTGCATAGCGTTTTGCATTATTTCTC 60.075 38.462 16.72 0.00 46.87 2.87
1948 2579 5.555069 GCTGCATAGCGTTTTGCATTATTTC 60.555 40.000 16.72 1.18 46.87 2.17
1951 2582 3.374745 GCTGCATAGCGTTTTGCATTAT 58.625 40.909 16.72 0.00 46.87 1.28
1953 2584 1.632422 GCTGCATAGCGTTTTGCATT 58.368 45.000 16.72 0.00 46.87 3.56
1973 2636 7.461107 ACATTTTACTCGGTTTGATTATCACG 58.539 34.615 0.00 0.00 0.00 4.35
1987 2650 2.981400 ACCCGCAAACATTTTACTCG 57.019 45.000 0.00 0.00 0.00 4.18
2023 2686 7.315142 GTGCTAATCATCTTTTGAACCATGAA 58.685 34.615 0.00 0.00 38.03 2.57
2024 2687 6.403527 CGTGCTAATCATCTTTTGAACCATGA 60.404 38.462 0.00 0.00 38.03 3.07
2027 2690 4.155826 CCGTGCTAATCATCTTTTGAACCA 59.844 41.667 0.00 0.00 38.03 3.67
2028 2691 4.662145 CCGTGCTAATCATCTTTTGAACC 58.338 43.478 0.00 0.00 38.03 3.62
2041 2704 1.440476 GTCTACCGGCCGTGCTAAT 59.560 57.895 26.12 4.44 0.00 1.73
2042 2705 2.887360 GTCTACCGGCCGTGCTAA 59.113 61.111 26.12 1.97 0.00 3.09
2052 2715 1.625616 CTTGTTAGCACCGTCTACCG 58.374 55.000 0.00 0.00 0.00 4.02
2053 2716 2.005560 GCCTTGTTAGCACCGTCTACC 61.006 57.143 0.00 0.00 0.00 3.18
2054 2717 1.067071 AGCCTTGTTAGCACCGTCTAC 60.067 52.381 0.00 0.00 0.00 2.59
2055 2718 1.203994 GAGCCTTGTTAGCACCGTCTA 59.796 52.381 0.00 0.00 0.00 2.59
2056 2719 0.037232 GAGCCTTGTTAGCACCGTCT 60.037 55.000 0.00 0.00 0.00 4.18
2057 2720 0.320421 TGAGCCTTGTTAGCACCGTC 60.320 55.000 0.00 0.00 0.00 4.79
2059 2722 0.602638 TGTGAGCCTTGTTAGCACCG 60.603 55.000 0.00 0.00 0.00 4.94
2060 2723 1.604604 TTGTGAGCCTTGTTAGCACC 58.395 50.000 0.00 0.00 0.00 5.01
2061 2724 3.315191 TCTTTTGTGAGCCTTGTTAGCAC 59.685 43.478 0.00 0.00 0.00 4.40
2062 2725 3.550820 TCTTTTGTGAGCCTTGTTAGCA 58.449 40.909 0.00 0.00 0.00 3.49
2064 2727 4.022935 TGCATCTTTTGTGAGCCTTGTTAG 60.023 41.667 0.00 0.00 0.00 2.34
2065 2728 3.888323 TGCATCTTTTGTGAGCCTTGTTA 59.112 39.130 0.00 0.00 0.00 2.41
2066 2729 2.694628 TGCATCTTTTGTGAGCCTTGTT 59.305 40.909 0.00 0.00 0.00 2.83
2067 2730 2.309613 TGCATCTTTTGTGAGCCTTGT 58.690 42.857 0.00 0.00 0.00 3.16
2068 2731 3.374220 TTGCATCTTTTGTGAGCCTTG 57.626 42.857 0.00 0.00 0.00 3.61
2071 2734 3.096489 TGTTTGCATCTTTTGTGAGCC 57.904 42.857 0.00 0.00 0.00 4.70
2072 2735 4.362279 TCTTGTTTGCATCTTTTGTGAGC 58.638 39.130 0.00 0.00 0.00 4.26
2073 2736 6.310956 TGTTTCTTGTTTGCATCTTTTGTGAG 59.689 34.615 0.00 0.00 0.00 3.51
2074 2737 6.162079 TGTTTCTTGTTTGCATCTTTTGTGA 58.838 32.000 0.00 0.00 0.00 3.58
2075 2738 6.406093 TGTTTCTTGTTTGCATCTTTTGTG 57.594 33.333 0.00 0.00 0.00 3.33
2076 2739 6.650390 ACTTGTTTCTTGTTTGCATCTTTTGT 59.350 30.769 0.00 0.00 0.00 2.83
2077 2740 7.064060 ACTTGTTTCTTGTTTGCATCTTTTG 57.936 32.000 0.00 0.00 0.00 2.44
2078 2741 6.313658 GGACTTGTTTCTTGTTTGCATCTTTT 59.686 34.615 0.00 0.00 0.00 2.27
2081 2744 4.498009 CGGACTTGTTTCTTGTTTGCATCT 60.498 41.667 0.00 0.00 0.00 2.90
2092 2755 4.675404 CGGCTCGGACTTGTTTCT 57.325 55.556 0.00 0.00 0.00 2.52
2109 2775 3.767902 AGATGAAGCTCTGCCTAATCC 57.232 47.619 0.00 0.00 0.00 3.01
2128 2794 8.213812 CACGGTTTAATTGCATTCAACTTTTAG 58.786 33.333 0.00 0.00 34.60 1.85
2133 2799 5.446143 TCACGGTTTAATTGCATTCAACT 57.554 34.783 0.00 0.00 34.60 3.16
2134 2800 4.621034 CCTCACGGTTTAATTGCATTCAAC 59.379 41.667 0.00 0.00 34.60 3.18
2136 2802 3.366883 GCCTCACGGTTTAATTGCATTCA 60.367 43.478 0.00 0.00 0.00 2.57
2140 2812 0.885196 GGCCTCACGGTTTAATTGCA 59.115 50.000 0.00 0.00 0.00 4.08
2155 2827 7.619698 AGCTTATGAAAATTAACTTTAGGGCCT 59.380 33.333 12.58 12.58 0.00 5.19
2156 2828 7.706607 CAGCTTATGAAAATTAACTTTAGGGCC 59.293 37.037 0.00 0.00 0.00 5.80
2170 2842 7.815641 TGATTTCGAATGACAGCTTATGAAAA 58.184 30.769 0.00 0.00 0.00 2.29
2172 2844 6.037500 CCTGATTTCGAATGACAGCTTATGAA 59.962 38.462 16.10 0.00 0.00 2.57
2173 2845 5.525012 CCTGATTTCGAATGACAGCTTATGA 59.475 40.000 16.10 0.00 0.00 2.15
2174 2846 5.295292 ACCTGATTTCGAATGACAGCTTATG 59.705 40.000 16.10 8.61 0.00 1.90
2176 2848 4.832248 ACCTGATTTCGAATGACAGCTTA 58.168 39.130 16.10 0.00 0.00 3.09
2177 2849 3.679389 ACCTGATTTCGAATGACAGCTT 58.321 40.909 16.10 7.02 0.00 3.74
2178 2850 3.340814 ACCTGATTTCGAATGACAGCT 57.659 42.857 16.10 5.49 0.00 4.24
2179 2851 4.184629 ACTACCTGATTTCGAATGACAGC 58.815 43.478 16.10 0.00 0.00 4.40
2180 2852 6.330278 TGTACTACCTGATTTCGAATGACAG 58.670 40.000 15.16 15.16 0.00 3.51
2181 2853 6.152154 TCTGTACTACCTGATTTCGAATGACA 59.848 38.462 0.00 0.00 0.00 3.58
2182 2854 6.561614 TCTGTACTACCTGATTTCGAATGAC 58.438 40.000 0.00 0.00 0.00 3.06
2183 2855 6.769134 TCTGTACTACCTGATTTCGAATGA 57.231 37.500 0.00 0.00 0.00 2.57
2184 2856 7.827819 TTTCTGTACTACCTGATTTCGAATG 57.172 36.000 0.00 0.00 0.00 2.67
2185 2857 8.095169 ACTTTTCTGTACTACCTGATTTCGAAT 58.905 33.333 0.00 0.00 0.00 3.34
2186 2858 7.439381 ACTTTTCTGTACTACCTGATTTCGAA 58.561 34.615 0.00 0.00 0.00 3.71
2187 2859 6.989659 ACTTTTCTGTACTACCTGATTTCGA 58.010 36.000 0.00 0.00 0.00 3.71
2188 2860 7.653767 AACTTTTCTGTACTACCTGATTTCG 57.346 36.000 0.00 0.00 0.00 3.46
2191 2863 8.630037 CCAAAAACTTTTCTGTACTACCTGATT 58.370 33.333 0.00 0.00 0.00 2.57
2192 2864 7.255486 GCCAAAAACTTTTCTGTACTACCTGAT 60.255 37.037 0.00 0.00 0.00 2.90
2193 2865 6.038936 GCCAAAAACTTTTCTGTACTACCTGA 59.961 38.462 0.00 0.00 0.00 3.86
2194 2866 6.183360 TGCCAAAAACTTTTCTGTACTACCTG 60.183 38.462 0.00 0.00 0.00 4.00
2195 2867 5.889289 TGCCAAAAACTTTTCTGTACTACCT 59.111 36.000 0.00 0.00 0.00 3.08
2196 2868 6.139048 TGCCAAAAACTTTTCTGTACTACC 57.861 37.500 0.00 0.00 0.00 3.18
2197 2869 8.642908 AAATGCCAAAAACTTTTCTGTACTAC 57.357 30.769 0.00 0.00 0.00 2.73
2198 2870 9.092876 CAAAATGCCAAAAACTTTTCTGTACTA 57.907 29.630 0.00 0.00 0.00 1.82
2200 2872 7.186128 CCAAAATGCCAAAAACTTTTCTGTAC 58.814 34.615 0.00 0.00 0.00 2.90
2201 2873 6.317391 CCCAAAATGCCAAAAACTTTTCTGTA 59.683 34.615 0.00 0.00 0.00 2.74
2213 2885 5.070981 TGTCTATTTCACCCAAAATGCCAAA 59.929 36.000 0.00 0.00 31.50 3.28
2214 2886 4.590647 TGTCTATTTCACCCAAAATGCCAA 59.409 37.500 0.00 0.00 31.50 4.52
2217 2889 4.929211 GGTTGTCTATTTCACCCAAAATGC 59.071 41.667 0.00 0.00 31.50 3.56
2221 2893 4.956700 TGTTGGTTGTCTATTTCACCCAAA 59.043 37.500 0.00 0.00 38.64 3.28
2224 2896 5.068591 ACTTTGTTGGTTGTCTATTTCACCC 59.931 40.000 0.00 0.00 0.00 4.61
2228 2900 7.642586 GTGTGTACTTTGTTGGTTGTCTATTTC 59.357 37.037 0.00 0.00 0.00 2.17
2231 2903 5.235616 CGTGTGTACTTTGTTGGTTGTCTAT 59.764 40.000 0.00 0.00 0.00 1.98
2254 2940 4.852104 CGTATATTCAACCAGCTAGCTACG 59.148 45.833 18.86 15.37 0.00 3.51
2262 2948 4.976116 GGCATTTTCGTATATTCAACCAGC 59.024 41.667 0.00 0.00 0.00 4.85
2263 2949 5.204833 CGGCATTTTCGTATATTCAACCAG 58.795 41.667 0.00 0.00 0.00 4.00
2266 2952 6.020995 CCAAACGGCATTTTCGTATATTCAAC 60.021 38.462 0.00 0.00 40.18 3.18
2273 2959 2.422127 CCTCCAAACGGCATTTTCGTAT 59.578 45.455 0.00 0.00 40.18 3.06
2274 2960 1.807742 CCTCCAAACGGCATTTTCGTA 59.192 47.619 0.00 0.00 40.18 3.43
2275 2961 0.596082 CCTCCAAACGGCATTTTCGT 59.404 50.000 0.00 0.00 43.14 3.85
2865 5589 9.698309 TGCTATATATTTTCTGTAGCTGTCTTC 57.302 33.333 0.00 0.00 38.76 2.87
2915 5639 2.173569 AGGTGACTTGCCTTGTTCTTCT 59.826 45.455 0.00 0.00 37.44 2.85
3045 5770 1.003718 GCTCGTACAAAGGGTGGCT 60.004 57.895 0.00 0.00 0.00 4.75
3521 6273 5.189736 TGAGAGTAAATGTATCTTGTGGGCT 59.810 40.000 0.00 0.00 0.00 5.19
3803 6570 2.841442 AGGTGGAAGAGTAGTTGTGC 57.159 50.000 0.00 0.00 0.00 4.57
3804 6571 5.794894 ACAATAGGTGGAAGAGTAGTTGTG 58.205 41.667 0.00 0.00 0.00 3.33
3805 6572 6.435292 AACAATAGGTGGAAGAGTAGTTGT 57.565 37.500 0.00 0.00 0.00 3.32
3821 6588 9.731819 CTGGTATATGTAGCCGTATAACAATAG 57.268 37.037 0.00 0.00 40.52 1.73
3894 6670 3.317711 TCTCAATGAGCCTTTCGCAAAAA 59.682 39.130 5.18 0.00 41.38 1.94
3895 6671 2.884012 TCTCAATGAGCCTTTCGCAAAA 59.116 40.909 5.18 0.00 41.38 2.44
3896 6672 2.503331 TCTCAATGAGCCTTTCGCAAA 58.497 42.857 5.18 0.00 41.38 3.68
3897 6673 2.183478 TCTCAATGAGCCTTTCGCAA 57.817 45.000 5.18 0.00 41.38 4.85
3898 6674 2.183478 TTCTCAATGAGCCTTTCGCA 57.817 45.000 5.18 0.00 41.38 5.10
3899 6675 3.772060 ATTTCTCAATGAGCCTTTCGC 57.228 42.857 5.18 0.00 37.98 4.70
3900 6676 4.860907 CCAAATTTCTCAATGAGCCTTTCG 59.139 41.667 5.18 0.00 0.00 3.46
3901 6677 5.787380 ACCAAATTTCTCAATGAGCCTTTC 58.213 37.500 5.18 0.00 0.00 2.62
3902 6678 5.813513 ACCAAATTTCTCAATGAGCCTTT 57.186 34.783 5.18 2.49 0.00 3.11
3903 6679 8.055181 TCTATACCAAATTTCTCAATGAGCCTT 58.945 33.333 5.18 0.00 0.00 4.35
3904 6680 7.577303 TCTATACCAAATTTCTCAATGAGCCT 58.423 34.615 5.18 0.00 0.00 4.58
3905 6681 7.807977 TCTATACCAAATTTCTCAATGAGCC 57.192 36.000 5.18 0.00 0.00 4.70
3917 6693 9.401058 GCTTGAGCCATATATCTATACCAAATT 57.599 33.333 0.00 0.00 34.31 1.82
3918 6694 8.551440 TGCTTGAGCCATATATCTATACCAAAT 58.449 33.333 0.00 0.00 41.18 2.32
3919 6695 7.917003 TGCTTGAGCCATATATCTATACCAAA 58.083 34.615 0.00 0.00 41.18 3.28
3920 6696 7.494922 TGCTTGAGCCATATATCTATACCAA 57.505 36.000 0.00 0.00 41.18 3.67
3921 6697 7.494922 TTGCTTGAGCCATATATCTATACCA 57.505 36.000 0.00 0.00 41.18 3.25
3922 6698 8.669243 GTTTTGCTTGAGCCATATATCTATACC 58.331 37.037 0.00 0.00 41.18 2.73
3923 6699 8.383619 CGTTTTGCTTGAGCCATATATCTATAC 58.616 37.037 0.00 0.00 41.18 1.47
3924 6700 8.311109 TCGTTTTGCTTGAGCCATATATCTATA 58.689 33.333 0.00 0.00 41.18 1.31
3925 6701 7.161404 TCGTTTTGCTTGAGCCATATATCTAT 58.839 34.615 0.00 0.00 41.18 1.98
3926 6702 6.521162 TCGTTTTGCTTGAGCCATATATCTA 58.479 36.000 0.00 0.00 41.18 1.98
3927 6703 5.368145 TCGTTTTGCTTGAGCCATATATCT 58.632 37.500 0.00 0.00 41.18 1.98
3928 6704 5.673337 TCGTTTTGCTTGAGCCATATATC 57.327 39.130 0.00 0.00 41.18 1.63
3930 6706 5.888691 TTTCGTTTTGCTTGAGCCATATA 57.111 34.783 0.00 0.00 41.18 0.86
3947 6723 3.036819 GGGAGGTAGGGAGTAATTTCGT 58.963 50.000 0.00 0.00 0.00 3.85
3961 6737 0.188342 GGTACGGGTATGGGGAGGTA 59.812 60.000 0.00 0.00 0.00 3.08
3962 6738 1.075001 GGTACGGGTATGGGGAGGT 60.075 63.158 0.00 0.00 0.00 3.85
3963 6739 1.119574 CAGGTACGGGTATGGGGAGG 61.120 65.000 0.00 0.00 0.00 4.30
3964 6740 1.755393 GCAGGTACGGGTATGGGGAG 61.755 65.000 0.00 0.00 0.00 4.30
3968 6744 2.814835 GGGGCAGGTACGGGTATGG 61.815 68.421 0.00 0.00 0.00 2.74
3969 6745 2.826702 GGGGCAGGTACGGGTATG 59.173 66.667 0.00 0.00 0.00 2.39
3970 6746 2.841044 CGGGGCAGGTACGGGTAT 60.841 66.667 0.00 0.00 0.00 2.73
3987 6815 2.941064 GCAACGTATTAAAGGAGGGACC 59.059 50.000 0.00 0.00 39.35 4.46
3996 6824 3.340034 CCAGGACTGGCAACGTATTAAA 58.660 45.455 5.27 0.00 44.73 1.52
4037 6868 5.894807 AGTTAATGCAACATTGATGGCTAC 58.105 37.500 3.11 0.00 39.81 3.58
4067 6901 6.384305 ACTGCTCCCATTAAACTACTCTGTAT 59.616 38.462 0.00 0.00 0.00 2.29
4069 6903 4.532521 ACTGCTCCCATTAAACTACTCTGT 59.467 41.667 0.00 0.00 0.00 3.41
4070 6904 5.091261 ACTGCTCCCATTAAACTACTCTG 57.909 43.478 0.00 0.00 0.00 3.35
4072 6906 9.043079 GTTTATACTGCTCCCATTAAACTACTC 57.957 37.037 0.00 0.00 0.00 2.59
4073 6907 8.769359 AGTTTATACTGCTCCCATTAAACTACT 58.231 33.333 4.55 0.00 35.54 2.57
4076 6910 7.865706 CAGTTTATACTGCTCCCATTAAACT 57.134 36.000 0.12 0.00 44.81 2.66
4094 6943 2.762327 GGGTCCGATACTCACCAGTTTA 59.238 50.000 0.00 0.00 33.62 2.01
4095 6944 1.553704 GGGTCCGATACTCACCAGTTT 59.446 52.381 0.00 0.00 33.62 2.66
4097 6946 1.035932 CGGGTCCGATACTCACCAGT 61.036 60.000 2.83 0.00 42.83 4.00
4098 6947 1.734137 CGGGTCCGATACTCACCAG 59.266 63.158 2.83 0.00 42.83 4.00
4099 6948 1.755395 CCGGGTCCGATACTCACCA 60.755 63.158 11.39 0.00 42.83 4.17
4100 6949 3.126528 CCGGGTCCGATACTCACC 58.873 66.667 11.39 0.00 42.83 4.02
4101 6950 1.745320 ATGCCGGGTCCGATACTCAC 61.745 60.000 11.39 0.00 42.83 3.51
4102 6951 1.046472 AATGCCGGGTCCGATACTCA 61.046 55.000 11.39 1.56 42.83 3.41
4103 6952 0.963962 TAATGCCGGGTCCGATACTC 59.036 55.000 11.39 0.00 42.83 2.59
4104 6953 1.549170 GATAATGCCGGGTCCGATACT 59.451 52.381 11.39 0.00 42.83 2.12
4106 6955 1.548719 CAGATAATGCCGGGTCCGATA 59.451 52.381 11.39 0.00 42.83 2.92
4107 6956 0.321671 CAGATAATGCCGGGTCCGAT 59.678 55.000 11.39 0.00 42.83 4.18
4109 6958 0.321671 ATCAGATAATGCCGGGTCCG 59.678 55.000 2.18 1.86 39.44 4.79
4111 6960 3.600388 CCTAATCAGATAATGCCGGGTC 58.400 50.000 2.18 0.00 0.00 4.46
4113 6962 2.359900 GCCTAATCAGATAATGCCGGG 58.640 52.381 2.18 0.00 0.00 5.73
4114 6963 2.002586 CGCCTAATCAGATAATGCCGG 58.997 52.381 0.00 0.00 0.00 6.13
4115 6964 2.688507 ACGCCTAATCAGATAATGCCG 58.311 47.619 0.00 0.00 0.00 5.69
4117 6966 5.521735 CCAGATACGCCTAATCAGATAATGC 59.478 44.000 0.00 0.00 0.00 3.56
4118 6967 6.045318 CCCAGATACGCCTAATCAGATAATG 58.955 44.000 0.00 0.00 0.00 1.90
4121 6970 3.447586 GCCCAGATACGCCTAATCAGATA 59.552 47.826 0.00 0.00 0.00 1.98
4122 6971 2.234908 GCCCAGATACGCCTAATCAGAT 59.765 50.000 0.00 0.00 0.00 2.90
4123 6972 1.618837 GCCCAGATACGCCTAATCAGA 59.381 52.381 0.00 0.00 0.00 3.27
4178 7173 0.105964 CATCGCCATAACTTCCGGGA 59.894 55.000 0.00 0.00 0.00 5.14
4209 7204 0.178975 CCTCCCTCTACCTGCTCGAT 60.179 60.000 0.00 0.00 0.00 3.59
4240 7235 3.718480 GACCGGCCGACGTACGTAC 62.718 68.421 30.73 15.90 42.24 3.67
4241 7236 3.496131 GACCGGCCGACGTACGTA 61.496 66.667 30.73 0.00 42.24 3.57
4353 7405 8.963130 CAAGACGCACATTGTAATTTCTAAAAA 58.037 29.630 0.00 0.00 0.00 1.94
4366 7418 1.003972 ACGTGAACAAGACGCACATTG 60.004 47.619 0.00 0.00 40.56 2.82
4367 7419 1.295792 ACGTGAACAAGACGCACATT 58.704 45.000 0.00 0.00 40.56 2.71
4368 7420 1.003972 CAACGTGAACAAGACGCACAT 60.004 47.619 0.00 0.00 40.56 3.21
4420 7472 0.036732 AGACCTGCATTTTCTCGCCA 59.963 50.000 0.00 0.00 0.00 5.69
4427 7479 1.260544 GCCTTGGAGACCTGCATTTT 58.739 50.000 0.00 0.00 0.00 1.82
5936 9140 6.154203 TGTCCAAAGTAATGAAATTGCACA 57.846 33.333 0.00 0.00 41.74 4.57
5985 9189 7.926555 CCATAAGAGACACCGAACTTACATAAT 59.073 37.037 0.00 0.00 0.00 1.28
5988 9192 5.421056 TCCATAAGAGACACCGAACTTACAT 59.579 40.000 0.00 0.00 0.00 2.29
5989 9193 4.768448 TCCATAAGAGACACCGAACTTACA 59.232 41.667 0.00 0.00 0.00 2.41
5990 9194 5.320549 TCCATAAGAGACACCGAACTTAC 57.679 43.478 0.00 0.00 0.00 2.34
5993 9197 3.133003 CCATCCATAAGAGACACCGAACT 59.867 47.826 0.00 0.00 0.00 3.01
5994 9198 3.458189 CCATCCATAAGAGACACCGAAC 58.542 50.000 0.00 0.00 0.00 3.95
5997 9201 2.039418 TCCCATCCATAAGAGACACCG 58.961 52.381 0.00 0.00 0.00 4.94
6038 9263 3.402628 ACGTTATGAAACAGAGGCAGT 57.597 42.857 0.00 0.00 35.16 4.40
6041 9266 6.092259 ACATTCTTACGTTATGAAACAGAGGC 59.908 38.462 0.00 0.00 35.16 4.70
6064 9289 4.202315 CCATCCGTCCCATAATGTAAGACA 60.202 45.833 0.00 0.00 0.00 3.41
6067 9292 4.569943 CTCCATCCGTCCCATAATGTAAG 58.430 47.826 0.00 0.00 0.00 2.34
6079 9304 5.646577 ATTAGTAGTATGCTCCATCCGTC 57.353 43.478 0.00 0.00 29.76 4.79
6080 9305 6.720288 AGTAATTAGTAGTATGCTCCATCCGT 59.280 38.462 0.00 0.00 29.76 4.69
6081 9306 7.159322 AGTAATTAGTAGTATGCTCCATCCG 57.841 40.000 0.00 0.00 29.76 4.18
6082 9307 7.178628 TGGAGTAATTAGTAGTATGCTCCATCC 59.821 40.741 11.81 1.41 44.11 3.51
6083 9308 8.123639 TGGAGTAATTAGTAGTATGCTCCATC 57.876 38.462 11.81 0.00 44.11 3.51
6084 9309 7.179338 CCTGGAGTAATTAGTAGTATGCTCCAT 59.821 40.741 14.74 0.00 46.61 3.41
6085 9310 6.493802 CCTGGAGTAATTAGTAGTATGCTCCA 59.506 42.308 14.02 14.02 45.97 3.86
6086 9311 6.720288 TCCTGGAGTAATTAGTAGTATGCTCC 59.280 42.308 7.89 7.89 41.01 4.70
6087 9312 7.576098 GCTCCTGGAGTAATTAGTAGTATGCTC 60.576 44.444 23.92 0.00 29.09 4.26
6088 9313 6.209788 GCTCCTGGAGTAATTAGTAGTATGCT 59.790 42.308 23.92 0.00 30.69 3.79
6089 9314 6.391537 GCTCCTGGAGTAATTAGTAGTATGC 58.608 44.000 23.92 1.79 31.39 3.14
6090 9315 6.430308 TCGCTCCTGGAGTAATTAGTAGTATG 59.570 42.308 23.92 0.00 31.39 2.39
6091 9316 6.540995 TCGCTCCTGGAGTAATTAGTAGTAT 58.459 40.000 23.92 0.00 31.39 2.12
6092 9317 5.933617 TCGCTCCTGGAGTAATTAGTAGTA 58.066 41.667 23.92 0.00 31.39 1.82
6093 9318 4.789807 TCGCTCCTGGAGTAATTAGTAGT 58.210 43.478 23.92 0.00 31.39 2.73
6094 9319 5.764131 CTTCGCTCCTGGAGTAATTAGTAG 58.236 45.833 23.92 8.87 31.39 2.57
6095 9320 4.037684 GCTTCGCTCCTGGAGTAATTAGTA 59.962 45.833 23.92 3.83 31.39 1.82
6096 9321 3.181474 GCTTCGCTCCTGGAGTAATTAGT 60.181 47.826 23.92 0.00 31.39 2.24
6097 9322 3.181475 TGCTTCGCTCCTGGAGTAATTAG 60.181 47.826 23.92 14.77 31.39 1.73
6098 9323 2.764010 TGCTTCGCTCCTGGAGTAATTA 59.236 45.455 23.92 8.71 31.39 1.40
6099 9324 1.555075 TGCTTCGCTCCTGGAGTAATT 59.445 47.619 23.92 0.00 31.39 1.40
6100 9325 1.195115 TGCTTCGCTCCTGGAGTAAT 58.805 50.000 23.92 0.00 31.39 1.89
6101 9326 1.195115 ATGCTTCGCTCCTGGAGTAA 58.805 50.000 23.92 16.95 31.39 2.24
6102 9327 1.195115 AATGCTTCGCTCCTGGAGTA 58.805 50.000 23.92 10.78 31.39 2.59
6103 9328 0.326264 AAATGCTTCGCTCCTGGAGT 59.674 50.000 23.92 0.08 31.39 3.85
6104 9329 0.731417 CAAATGCTTCGCTCCTGGAG 59.269 55.000 19.55 19.55 0.00 3.86
6105 9330 0.324614 TCAAATGCTTCGCTCCTGGA 59.675 50.000 0.00 0.00 0.00 3.86
6106 9331 0.731417 CTCAAATGCTTCGCTCCTGG 59.269 55.000 0.00 0.00 0.00 4.45
6107 9332 1.446907 ACTCAAATGCTTCGCTCCTG 58.553 50.000 0.00 0.00 0.00 3.86
6108 9333 3.055819 TCTTACTCAAATGCTTCGCTCCT 60.056 43.478 0.00 0.00 0.00 3.69
6109 9334 3.262420 TCTTACTCAAATGCTTCGCTCC 58.738 45.455 0.00 0.00 0.00 4.70
6110 9335 4.568359 TCATCTTACTCAAATGCTTCGCTC 59.432 41.667 0.00 0.00 0.00 5.03
6111 9336 4.507710 TCATCTTACTCAAATGCTTCGCT 58.492 39.130 0.00 0.00 0.00 4.93
6112 9337 4.864916 TCATCTTACTCAAATGCTTCGC 57.135 40.909 0.00 0.00 0.00 4.70
6113 9338 5.203370 GCATCATCTTACTCAAATGCTTCG 58.797 41.667 0.00 0.00 37.21 3.79
6114 9339 5.517904 GGCATCATCTTACTCAAATGCTTC 58.482 41.667 5.27 0.00 39.47 3.86
6129 9354 2.515926 TCTACTCTTGCGGCATCATC 57.484 50.000 2.28 0.00 0.00 2.92
6131 9356 2.034878 AGATCTACTCTTGCGGCATCA 58.965 47.619 2.28 0.00 0.00 3.07
6138 9363 5.241662 ACACAGGAAAAGATCTACTCTTGC 58.758 41.667 13.14 4.00 43.60 4.01
6140 9365 7.509546 TGAAACACAGGAAAAGATCTACTCTT 58.490 34.615 0.00 0.00 46.44 2.85
6163 9398 2.098614 GAGGAGAGCACTGAGACATGA 58.901 52.381 0.00 0.00 0.00 3.07
6171 9406 3.606595 TTGATCAAGAGGAGAGCACTG 57.393 47.619 3.38 0.00 30.16 3.66
6172 9407 5.424895 AGTTATTGATCAAGAGGAGAGCACT 59.575 40.000 14.54 5.02 30.16 4.40
6180 9415 9.495572 GGGTTAATAGAGTTATTGATCAAGAGG 57.504 37.037 14.54 0.00 31.97 3.69
6181 9416 9.197694 CGGGTTAATAGAGTTATTGATCAAGAG 57.802 37.037 14.54 0.00 31.97 2.85
6228 9463 4.415881 AAAACCGAGGCCAAAGATTTTT 57.584 36.364 5.01 0.00 0.00 1.94
6229 9464 4.830600 TCTAAAACCGAGGCCAAAGATTTT 59.169 37.500 5.01 7.70 0.00 1.82
6258 9493 7.821846 TGCTTCTTGTAACATTTGGTTCTTTTT 59.178 29.630 0.00 0.00 40.96 1.94
6259 9494 7.277760 GTGCTTCTTGTAACATTTGGTTCTTTT 59.722 33.333 0.00 0.00 40.96 2.27
6291 9526 8.770438 ACAAAACCGCATGAAAATATAAACAT 57.230 26.923 0.00 0.00 0.00 2.71
6293 9528 9.523730 GAAACAAAACCGCATGAAAATATAAAC 57.476 29.630 0.00 0.00 0.00 2.01
6294 9529 9.261180 TGAAACAAAACCGCATGAAAATATAAA 57.739 25.926 0.00 0.00 0.00 1.40
6295 9530 8.818141 TGAAACAAAACCGCATGAAAATATAA 57.182 26.923 0.00 0.00 0.00 0.98
6297 9532 7.387397 ACATGAAACAAAACCGCATGAAAATAT 59.613 29.630 0.00 0.00 38.82 1.28
6298 9533 6.703607 ACATGAAACAAAACCGCATGAAAATA 59.296 30.769 0.00 0.00 38.82 1.40
6299 9534 5.526846 ACATGAAACAAAACCGCATGAAAAT 59.473 32.000 0.00 0.00 38.82 1.82
6300 9535 4.872691 ACATGAAACAAAACCGCATGAAAA 59.127 33.333 0.00 0.00 38.82 2.29
6303 9562 3.724508 ACATGAAACAAAACCGCATGA 57.275 38.095 0.00 0.00 38.82 3.07
6308 9567 9.367717 CAATAATGAAAACATGAAACAAAACCG 57.632 29.630 0.00 0.00 0.00 4.44
6309 9568 9.168353 GCAATAATGAAAACATGAAACAAAACC 57.832 29.630 0.00 0.00 0.00 3.27
6314 9573 8.828688 TGATGCAATAATGAAAACATGAAACA 57.171 26.923 0.00 0.00 0.00 2.83
6327 9586 9.499585 CTAACTGAGTTTCTTGATGCAATAATG 57.500 33.333 1.97 0.00 0.00 1.90
6436 9696 1.610522 CAAAAGCAGGTGTCTTCCCAG 59.389 52.381 0.00 0.00 0.00 4.45
6441 9701 6.655078 ATTACATTCAAAAGCAGGTGTCTT 57.345 33.333 0.00 0.00 0.00 3.01
6442 9702 6.655078 AATTACATTCAAAAGCAGGTGTCT 57.345 33.333 0.00 0.00 0.00 3.41
6459 9719 6.595682 TGGAAATTTGGGCAAGAAAATTACA 58.404 32.000 0.00 0.00 35.47 2.41
6460 9720 7.012799 TGTTGGAAATTTGGGCAAGAAAATTAC 59.987 33.333 0.00 0.00 35.47 1.89
6462 9722 5.890419 TGTTGGAAATTTGGGCAAGAAAATT 59.110 32.000 0.00 0.00 37.54 1.82
6463 9723 5.444176 TGTTGGAAATTTGGGCAAGAAAAT 58.556 33.333 0.00 0.00 0.00 1.82
6493 9755 8.607441 TGGTGTATATCTGATGAGTATTTTGC 57.393 34.615 0.00 0.00 0.00 3.68
6536 9798 6.012745 AGCTCCATCTATTGAAAAACACCTT 58.987 36.000 0.00 0.00 0.00 3.50
6538 9800 5.904362 AGCTCCATCTATTGAAAAACACC 57.096 39.130 0.00 0.00 0.00 4.16
6539 9801 8.045176 ACTTAGCTCCATCTATTGAAAAACAC 57.955 34.615 0.00 0.00 0.00 3.32
6583 9845 9.801714 CATGTTTCTTTTATGTTTTGATTGCTC 57.198 29.630 0.00 0.00 0.00 4.26
6625 9887 1.139989 CAGTTGTGGTCGTGTAGCTG 58.860 55.000 0.00 0.00 0.00 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.