Multiple sequence alignment - TraesCS4B01G294400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G294400 chr4B 100.000 2375 0 0 1 2375 580018076 580020450 0.000000e+00 4386.0
1 TraesCS4B01G294400 chr4B 95.198 1312 56 4 1067 2375 580042708 580044015 0.000000e+00 2067.0
2 TraesCS4B01G294400 chr4B 78.696 230 43 6 2063 2289 661207415 661207641 5.290000e-32 148.0
3 TraesCS4B01G294400 chr4A 88.368 1023 54 26 382 1385 5831803 5830827 0.000000e+00 1170.0
4 TraesCS4B01G294400 chr4D 95.455 638 13 3 761 1385 464183137 464183771 0.000000e+00 1003.0
5 TraesCS4B01G294400 chr4D 87.080 387 42 5 6 384 484673453 484673839 4.690000e-117 431.0
6 TraesCS4B01G294400 chr4D 79.856 278 44 10 2060 2330 408325355 408325083 2.410000e-45 193.0
7 TraesCS4B01G294400 chr4D 88.608 79 7 2 1985 2063 396252232 396252308 6.990000e-16 95.3
8 TraesCS4B01G294400 chr3D 88.630 387 41 2 1 384 104018254 104017868 3.570000e-128 468.0
9 TraesCS4B01G294400 chr3D 76.656 634 126 15 761 1379 48243713 48244339 4.890000e-87 331.0
10 TraesCS4B01G294400 chr7B 88.052 385 42 3 3 384 34237754 34238137 1.000000e-123 453.0
11 TraesCS4B01G294400 chr7B 86.207 203 25 2 1748 1948 578226442 578226643 1.430000e-52 217.0
12 TraesCS4B01G294400 chr7B 77.647 255 47 8 2063 2313 227039611 227039859 1.900000e-31 147.0
13 TraesCS4B01G294400 chr3B 87.792 385 43 3 1 382 151227399 151227016 4.660000e-122 448.0
14 TraesCS4B01G294400 chr3B 87.368 380 44 3 6 382 229472737 229473115 1.300000e-117 433.0
15 TraesCS4B01G294400 chr3B 88.177 203 21 2 1748 1948 783791202 783791403 3.050000e-59 239.0
16 TraesCS4B01G294400 chr6D 87.273 385 41 5 6 384 367126688 367127070 1.300000e-117 433.0
17 TraesCS4B01G294400 chr6D 80.831 313 46 13 2063 2369 424524229 424524533 1.420000e-57 233.0
18 TraesCS4B01G294400 chr5D 86.923 390 46 3 1 387 360419779 360419392 1.300000e-117 433.0
19 TraesCS4B01G294400 chr5D 86.341 205 23 4 1748 1948 498435260 498435057 3.970000e-53 219.0
20 TraesCS4B01G294400 chr5D 88.608 79 7 2 1985 2063 443661982 443662058 6.990000e-16 95.3
21 TraesCS4B01G294400 chr2D 87.113 388 42 4 1 385 534726201 534726583 1.300000e-117 433.0
22 TraesCS4B01G294400 chr2D 79.545 308 53 9 2063 2367 323258100 323258400 6.650000e-51 211.0
23 TraesCS4B01G294400 chr2D 79.646 226 40 6 2065 2288 151323648 151323869 8.790000e-35 158.0
24 TraesCS4B01G294400 chr2D 77.043 257 45 14 2071 2322 527246227 527246474 4.120000e-28 135.0
25 TraesCS4B01G294400 chr2D 89.474 76 6 2 1988 2063 590309485 590309412 6.990000e-16 95.3
26 TraesCS4B01G294400 chr7A 87.013 385 47 2 1 382 693473730 693473346 4.690000e-117 431.0
27 TraesCS4B01G294400 chr7A 85.784 204 25 3 1748 1948 56979892 56980094 1.850000e-51 213.0
28 TraesCS4B01G294400 chr3A 76.108 632 135 11 761 1383 60437867 60438491 1.370000e-82 316.0
29 TraesCS4B01G294400 chr3A 88.060 201 21 3 1750 1948 328930973 328930774 3.950000e-58 235.0
30 TraesCS4B01G294400 chr7D 87.245 196 17 7 1751 1944 147697209 147697398 1.430000e-52 217.0
31 TraesCS4B01G294400 chr7D 86.364 198 19 7 1744 1936 78250652 78250458 2.390000e-50 209.0
32 TraesCS4B01G294400 chr7D 84.615 208 27 3 1743 1948 117462008 117461804 4.000000e-48 202.0
33 TraesCS4B01G294400 chr7D 78.295 258 41 14 2063 2313 547605046 547604797 4.090000e-33 152.0
34 TraesCS4B01G294400 chr5A 80.000 230 35 11 2064 2288 595141419 595141196 2.440000e-35 159.0
35 TraesCS4B01G294400 chr5A 86.813 91 8 4 1974 2063 409585521 409585434 5.400000e-17 99.0
36 TraesCS4B01G294400 chr1D 78.277 267 45 12 2060 2321 137059656 137059914 2.440000e-35 159.0
37 TraesCS4B01G294400 chr1D 89.474 76 6 2 1988 2063 14423775 14423702 6.990000e-16 95.3
38 TraesCS4B01G294400 chr1D 88.462 78 8 1 1983 2059 234592284 234592207 2.510000e-15 93.5
39 TraesCS4B01G294400 chr2B 86.111 108 15 0 1953 2060 161873227 161873120 1.490000e-22 117.0
40 TraesCS4B01G294400 chr2A 87.805 82 8 2 1988 2069 581022878 581022799 6.990000e-16 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G294400 chr4B 580018076 580020450 2374 False 4386 4386 100.000 1 2375 1 chr4B.!!$F1 2374
1 TraesCS4B01G294400 chr4B 580042708 580044015 1307 False 2067 2067 95.198 1067 2375 1 chr4B.!!$F2 1308
2 TraesCS4B01G294400 chr4A 5830827 5831803 976 True 1170 1170 88.368 382 1385 1 chr4A.!!$R1 1003
3 TraesCS4B01G294400 chr4D 464183137 464183771 634 False 1003 1003 95.455 761 1385 1 chr4D.!!$F2 624
4 TraesCS4B01G294400 chr3D 48243713 48244339 626 False 331 331 76.656 761 1379 1 chr3D.!!$F1 618
5 TraesCS4B01G294400 chr3A 60437867 60438491 624 False 316 316 76.108 761 1383 1 chr3A.!!$F1 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
292 293 0.039617 TTGCGGGTTCTGATTTTGCG 60.04 50.0 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2204 2245 0.105039 AATTTTTCCACCGCCGCAAA 59.895 45.0 0.0 0.0 0.0 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.914426 CCAACTAGTGGGAGCAGTTAT 57.086 47.619 11.30 0.00 44.64 1.89
25 26 3.535561 CCAACTAGTGGGAGCAGTTATG 58.464 50.000 11.30 0.00 44.64 1.90
26 27 3.197766 CCAACTAGTGGGAGCAGTTATGA 59.802 47.826 11.30 0.00 44.64 2.15
27 28 4.323485 CCAACTAGTGGGAGCAGTTATGAA 60.323 45.833 11.30 0.00 44.64 2.57
28 29 5.245531 CAACTAGTGGGAGCAGTTATGAAA 58.754 41.667 0.00 0.00 31.46 2.69
29 30 5.091261 ACTAGTGGGAGCAGTTATGAAAG 57.909 43.478 0.00 0.00 0.00 2.62
30 31 4.532521 ACTAGTGGGAGCAGTTATGAAAGT 59.467 41.667 0.00 0.00 0.00 2.66
31 32 4.373156 AGTGGGAGCAGTTATGAAAGTT 57.627 40.909 0.00 0.00 0.00 2.66
32 33 4.074970 AGTGGGAGCAGTTATGAAAGTTG 58.925 43.478 0.00 0.00 0.00 3.16
33 34 3.191371 GTGGGAGCAGTTATGAAAGTTGG 59.809 47.826 0.00 0.00 0.00 3.77
34 35 3.073798 TGGGAGCAGTTATGAAAGTTGGA 59.926 43.478 0.00 0.00 0.00 3.53
35 36 4.263905 TGGGAGCAGTTATGAAAGTTGGAT 60.264 41.667 0.00 0.00 0.00 3.41
36 37 5.045213 TGGGAGCAGTTATGAAAGTTGGATA 60.045 40.000 0.00 0.00 0.00 2.59
37 38 6.064717 GGGAGCAGTTATGAAAGTTGGATAT 58.935 40.000 0.00 0.00 0.00 1.63
38 39 6.205658 GGGAGCAGTTATGAAAGTTGGATATC 59.794 42.308 0.00 0.00 0.00 1.63
39 40 6.995091 GGAGCAGTTATGAAAGTTGGATATCT 59.005 38.462 2.05 0.00 0.00 1.98
40 41 7.500559 GGAGCAGTTATGAAAGTTGGATATCTT 59.499 37.037 2.05 0.00 0.00 2.40
41 42 8.443953 AGCAGTTATGAAAGTTGGATATCTTC 57.556 34.615 2.05 0.00 0.00 2.87
42 43 8.270744 AGCAGTTATGAAAGTTGGATATCTTCT 58.729 33.333 2.05 0.00 0.00 2.85
43 44 9.547753 GCAGTTATGAAAGTTGGATATCTTCTA 57.452 33.333 2.05 0.00 0.00 2.10
49 50 8.213518 TGAAAGTTGGATATCTTCTACAATGC 57.786 34.615 2.05 0.00 0.00 3.56
50 51 7.828717 TGAAAGTTGGATATCTTCTACAATGCA 59.171 33.333 2.05 0.00 0.00 3.96
51 52 8.757982 AAAGTTGGATATCTTCTACAATGCAT 57.242 30.769 2.05 0.00 0.00 3.96
52 53 9.851686 AAAGTTGGATATCTTCTACAATGCATA 57.148 29.630 0.00 0.00 0.00 3.14
53 54 9.851686 AAGTTGGATATCTTCTACAATGCATAA 57.148 29.630 0.00 0.00 0.00 1.90
68 69 7.424227 CAATGCATAATTGTGGTTCTTGTTT 57.576 32.000 0.00 0.00 40.78 2.83
69 70 7.863666 CAATGCATAATTGTGGTTCTTGTTTT 58.136 30.769 0.00 0.00 40.78 2.43
70 71 7.656707 ATGCATAATTGTGGTTCTTGTTTTC 57.343 32.000 0.00 0.00 0.00 2.29
71 72 6.577103 TGCATAATTGTGGTTCTTGTTTTCA 58.423 32.000 4.23 0.00 0.00 2.69
72 73 7.215789 TGCATAATTGTGGTTCTTGTTTTCAT 58.784 30.769 4.23 0.00 0.00 2.57
73 74 7.714377 TGCATAATTGTGGTTCTTGTTTTCATT 59.286 29.630 4.23 0.00 0.00 2.57
74 75 8.011106 GCATAATTGTGGTTCTTGTTTTCATTG 58.989 33.333 4.23 0.00 0.00 2.82
75 76 6.923928 AATTGTGGTTCTTGTTTTCATTGG 57.076 33.333 0.00 0.00 0.00 3.16
76 77 5.413309 TTGTGGTTCTTGTTTTCATTGGT 57.587 34.783 0.00 0.00 0.00 3.67
77 78 5.004922 TGTGGTTCTTGTTTTCATTGGTC 57.995 39.130 0.00 0.00 0.00 4.02
78 79 4.709397 TGTGGTTCTTGTTTTCATTGGTCT 59.291 37.500 0.00 0.00 0.00 3.85
79 80 5.186797 TGTGGTTCTTGTTTTCATTGGTCTT 59.813 36.000 0.00 0.00 0.00 3.01
80 81 6.378564 TGTGGTTCTTGTTTTCATTGGTCTTA 59.621 34.615 0.00 0.00 0.00 2.10
81 82 6.695713 GTGGTTCTTGTTTTCATTGGTCTTAC 59.304 38.462 0.00 0.00 0.00 2.34
82 83 6.605594 TGGTTCTTGTTTTCATTGGTCTTACT 59.394 34.615 0.00 0.00 0.00 2.24
83 84 7.776030 TGGTTCTTGTTTTCATTGGTCTTACTA 59.224 33.333 0.00 0.00 0.00 1.82
84 85 8.793592 GGTTCTTGTTTTCATTGGTCTTACTAT 58.206 33.333 0.00 0.00 0.00 2.12
87 88 9.793259 TCTTGTTTTCATTGGTCTTACTATTCT 57.207 29.630 0.00 0.00 0.00 2.40
90 91 9.162764 TGTTTTCATTGGTCTTACTATTCTAGC 57.837 33.333 0.00 0.00 0.00 3.42
91 92 9.162764 GTTTTCATTGGTCTTACTATTCTAGCA 57.837 33.333 0.00 0.00 0.00 3.49
92 93 9.733556 TTTTCATTGGTCTTACTATTCTAGCAA 57.266 29.630 0.00 0.00 32.75 3.91
93 94 9.733556 TTTCATTGGTCTTACTATTCTAGCAAA 57.266 29.630 0.00 0.00 32.07 3.68
94 95 8.948631 TCATTGGTCTTACTATTCTAGCAAAG 57.051 34.615 0.00 0.00 32.07 2.77
95 96 7.495934 TCATTGGTCTTACTATTCTAGCAAAGC 59.504 37.037 0.00 0.00 32.07 3.51
96 97 6.546428 TGGTCTTACTATTCTAGCAAAGCT 57.454 37.500 0.00 0.00 43.41 3.74
97 98 6.947464 TGGTCTTACTATTCTAGCAAAGCTT 58.053 36.000 0.00 0.00 40.44 3.74
98 99 7.394816 TGGTCTTACTATTCTAGCAAAGCTTT 58.605 34.615 5.69 5.69 40.44 3.51
99 100 7.334421 TGGTCTTACTATTCTAGCAAAGCTTTG 59.666 37.037 30.70 30.70 40.44 2.77
100 101 7.201652 GGTCTTACTATTCTAGCAAAGCTTTGG 60.202 40.741 34.02 20.88 40.44 3.28
108 109 3.391506 AGCAAAGCTTTGGTGAATTCC 57.608 42.857 35.92 19.01 46.03 3.01
109 110 2.967887 AGCAAAGCTTTGGTGAATTCCT 59.032 40.909 35.92 20.71 46.03 3.36
110 111 4.151883 AGCAAAGCTTTGGTGAATTCCTA 58.848 39.130 35.92 0.00 46.03 2.94
111 112 4.774200 AGCAAAGCTTTGGTGAATTCCTAT 59.226 37.500 35.92 4.51 46.03 2.57
112 113 4.866486 GCAAAGCTTTGGTGAATTCCTATG 59.134 41.667 34.02 10.48 38.57 2.23
113 114 5.567423 GCAAAGCTTTGGTGAATTCCTATGT 60.567 40.000 34.02 0.00 38.57 2.29
114 115 6.350110 GCAAAGCTTTGGTGAATTCCTATGTA 60.350 38.462 34.02 0.00 38.57 2.29
115 116 7.631377 GCAAAGCTTTGGTGAATTCCTATGTAT 60.631 37.037 34.02 0.00 38.57 2.29
116 117 7.573968 AAGCTTTGGTGAATTCCTATGTATC 57.426 36.000 2.27 0.00 0.00 2.24
117 118 6.064717 AGCTTTGGTGAATTCCTATGTATCC 58.935 40.000 2.27 0.00 0.00 2.59
118 119 5.827797 GCTTTGGTGAATTCCTATGTATCCA 59.172 40.000 2.27 0.00 0.00 3.41
119 120 6.321181 GCTTTGGTGAATTCCTATGTATCCAA 59.679 38.462 2.27 2.97 0.00 3.53
120 121 7.014615 GCTTTGGTGAATTCCTATGTATCCAAT 59.985 37.037 2.27 0.00 33.46 3.16
121 122 7.822161 TTGGTGAATTCCTATGTATCCAATG 57.178 36.000 2.27 0.00 0.00 2.82
122 123 6.910191 TGGTGAATTCCTATGTATCCAATGT 58.090 36.000 2.27 0.00 0.00 2.71
123 124 6.998074 TGGTGAATTCCTATGTATCCAATGTC 59.002 38.462 2.27 0.00 0.00 3.06
124 125 6.147821 GGTGAATTCCTATGTATCCAATGTCG 59.852 42.308 2.27 0.00 0.00 4.35
125 126 6.706270 GTGAATTCCTATGTATCCAATGTCGT 59.294 38.462 2.27 0.00 0.00 4.34
126 127 7.226720 GTGAATTCCTATGTATCCAATGTCGTT 59.773 37.037 2.27 0.00 0.00 3.85
127 128 7.226523 TGAATTCCTATGTATCCAATGTCGTTG 59.773 37.037 2.27 0.00 37.57 4.10
128 129 5.862678 TCCTATGTATCCAATGTCGTTGA 57.137 39.130 6.35 0.00 40.37 3.18
129 130 6.228616 TCCTATGTATCCAATGTCGTTGAA 57.771 37.500 6.35 0.00 40.37 2.69
130 131 6.645306 TCCTATGTATCCAATGTCGTTGAAA 58.355 36.000 6.35 0.00 40.37 2.69
131 132 7.106890 TCCTATGTATCCAATGTCGTTGAAAA 58.893 34.615 6.35 0.00 40.37 2.29
132 133 7.608376 TCCTATGTATCCAATGTCGTTGAAAAA 59.392 33.333 6.35 0.00 40.37 1.94
133 134 7.910162 CCTATGTATCCAATGTCGTTGAAAAAG 59.090 37.037 6.35 0.00 40.37 2.27
134 135 5.457140 TGTATCCAATGTCGTTGAAAAAGC 58.543 37.500 6.35 0.00 40.37 3.51
135 136 4.582701 ATCCAATGTCGTTGAAAAAGCA 57.417 36.364 6.35 0.00 40.37 3.91
136 137 4.377839 TCCAATGTCGTTGAAAAAGCAA 57.622 36.364 6.35 0.00 40.37 3.91
137 138 4.748892 TCCAATGTCGTTGAAAAAGCAAA 58.251 34.783 6.35 0.00 40.37 3.68
138 139 4.803088 TCCAATGTCGTTGAAAAAGCAAAG 59.197 37.500 6.35 0.00 40.37 2.77
139 140 4.803088 CCAATGTCGTTGAAAAAGCAAAGA 59.197 37.500 6.35 0.00 40.37 2.52
140 141 5.290643 CCAATGTCGTTGAAAAAGCAAAGAA 59.709 36.000 6.35 0.00 40.37 2.52
141 142 6.183360 CCAATGTCGTTGAAAAAGCAAAGAAA 60.183 34.615 6.35 0.00 40.37 2.52
142 143 7.401080 CAATGTCGTTGAAAAAGCAAAGAAAT 58.599 30.769 0.00 0.00 40.37 2.17
143 144 6.329838 TGTCGTTGAAAAAGCAAAGAAATG 57.670 33.333 0.00 0.00 37.85 2.32
144 145 5.190342 GTCGTTGAAAAAGCAAAGAAATGC 58.810 37.500 0.00 0.00 46.78 3.56
163 164 8.483743 GAAATGCATTTTCTTGTGTCAAATTG 57.516 30.769 24.81 0.00 40.54 2.32
164 165 7.789273 AATGCATTTTCTTGTGTCAAATTGA 57.211 28.000 5.99 0.00 0.00 2.57
165 166 7.789273 ATGCATTTTCTTGTGTCAAATTGAA 57.211 28.000 0.00 0.00 0.00 2.69
166 167 7.236674 TGCATTTTCTTGTGTCAAATTGAAG 57.763 32.000 0.00 0.00 0.00 3.02
167 168 6.817641 TGCATTTTCTTGTGTCAAATTGAAGT 59.182 30.769 0.00 0.00 0.00 3.01
168 169 7.121272 GCATTTTCTTGTGTCAAATTGAAGTG 58.879 34.615 0.00 0.00 0.00 3.16
169 170 6.645700 TTTTCTTGTGTCAAATTGAAGTGC 57.354 33.333 0.00 0.00 0.00 4.40
170 171 4.979943 TCTTGTGTCAAATTGAAGTGCA 57.020 36.364 0.00 0.00 0.00 4.57
171 172 5.321959 TCTTGTGTCAAATTGAAGTGCAA 57.678 34.783 0.00 0.64 41.53 4.08
172 173 5.718146 TCTTGTGTCAAATTGAAGTGCAAA 58.282 33.333 0.00 0.00 40.48 3.68
173 174 6.339730 TCTTGTGTCAAATTGAAGTGCAAAT 58.660 32.000 0.00 0.00 40.48 2.32
174 175 6.817641 TCTTGTGTCAAATTGAAGTGCAAATT 59.182 30.769 0.00 0.00 40.48 1.82
175 176 6.981762 TGTGTCAAATTGAAGTGCAAATTT 57.018 29.167 0.00 1.77 40.48 1.82
176 177 7.375106 TGTGTCAAATTGAAGTGCAAATTTT 57.625 28.000 0.00 0.00 40.48 1.82
177 178 7.242079 TGTGTCAAATTGAAGTGCAAATTTTG 58.758 30.769 4.72 4.72 40.48 2.44
178 179 6.687958 GTGTCAAATTGAAGTGCAAATTTTGG 59.312 34.615 10.96 0.00 40.48 3.28
179 180 6.596888 TGTCAAATTGAAGTGCAAATTTTGGA 59.403 30.769 10.96 5.24 40.48 3.53
180 181 7.282675 TGTCAAATTGAAGTGCAAATTTTGGAT 59.717 29.630 10.96 0.00 40.48 3.41
181 182 8.130469 GTCAAATTGAAGTGCAAATTTTGGATT 58.870 29.630 10.96 2.15 40.48 3.01
182 183 8.684520 TCAAATTGAAGTGCAAATTTTGGATTT 58.315 25.926 10.40 10.40 40.48 2.17
183 184 8.747666 CAAATTGAAGTGCAAATTTTGGATTTG 58.252 29.630 14.44 11.57 40.48 2.32
189 190 3.835378 CAAATTTTGGATTTGCAGGCC 57.165 42.857 0.00 0.00 33.07 5.19
190 191 2.097680 AATTTTGGATTTGCAGGCCG 57.902 45.000 0.00 0.00 0.00 6.13
191 192 0.249955 ATTTTGGATTTGCAGGCCGG 59.750 50.000 0.00 0.00 0.00 6.13
192 193 2.447586 TTTTGGATTTGCAGGCCGGC 62.448 55.000 22.10 22.10 0.00 6.13
221 222 4.697756 CCGAGCAGACCCCGCAAA 62.698 66.667 0.00 0.00 0.00 3.68
222 223 3.121030 CGAGCAGACCCCGCAAAG 61.121 66.667 0.00 0.00 0.00 2.77
223 224 3.435186 GAGCAGACCCCGCAAAGC 61.435 66.667 0.00 0.00 0.00 3.51
224 225 3.909086 GAGCAGACCCCGCAAAGCT 62.909 63.158 0.00 0.00 34.61 3.74
225 226 3.741476 GCAGACCCCGCAAAGCTG 61.741 66.667 0.00 0.00 0.00 4.24
226 227 2.032528 CAGACCCCGCAAAGCTGA 59.967 61.111 0.00 0.00 0.00 4.26
227 228 2.032681 AGACCCCGCAAAGCTGAC 59.967 61.111 0.00 0.00 0.00 3.51
228 229 3.056328 GACCCCGCAAAGCTGACC 61.056 66.667 0.00 0.00 0.00 4.02
229 230 4.660938 ACCCCGCAAAGCTGACCC 62.661 66.667 0.00 0.00 0.00 4.46
232 233 2.047655 CCGCAAAGCTGACCCGTA 60.048 61.111 0.00 0.00 0.00 4.02
233 234 1.669760 CCGCAAAGCTGACCCGTAA 60.670 57.895 0.00 0.00 0.00 3.18
234 235 1.231958 CCGCAAAGCTGACCCGTAAA 61.232 55.000 0.00 0.00 0.00 2.01
235 236 0.589223 CGCAAAGCTGACCCGTAAAA 59.411 50.000 0.00 0.00 0.00 1.52
236 237 1.002251 CGCAAAGCTGACCCGTAAAAA 60.002 47.619 0.00 0.00 0.00 1.94
270 271 9.850628 TCCATAATATTCTTTTATACGAGTCCG 57.149 33.333 0.00 0.00 42.50 4.79
288 289 2.415697 CGTTTTGCGGGTTCTGATTT 57.584 45.000 0.00 0.00 36.85 2.17
289 290 2.738135 CGTTTTGCGGGTTCTGATTTT 58.262 42.857 0.00 0.00 36.85 1.82
290 291 2.470999 CGTTTTGCGGGTTCTGATTTTG 59.529 45.455 0.00 0.00 36.85 2.44
291 292 2.147436 TTTGCGGGTTCTGATTTTGC 57.853 45.000 0.00 0.00 0.00 3.68
292 293 0.039617 TTGCGGGTTCTGATTTTGCG 60.040 50.000 0.00 0.00 0.00 4.85
293 294 1.154035 GCGGGTTCTGATTTTGCGG 60.154 57.895 0.00 0.00 0.00 5.69
294 295 1.154035 CGGGTTCTGATTTTGCGGC 60.154 57.895 0.00 0.00 0.00 6.53
295 296 1.215382 GGGTTCTGATTTTGCGGCC 59.785 57.895 0.00 0.00 0.00 6.13
296 297 1.154035 GGTTCTGATTTTGCGGCCG 60.154 57.895 24.05 24.05 0.00 6.13
297 298 1.801512 GTTCTGATTTTGCGGCCGC 60.802 57.895 42.35 42.35 42.35 6.53
298 299 2.988688 TTCTGATTTTGCGGCCGCC 61.989 57.895 44.42 29.66 41.09 6.13
299 300 4.496927 CTGATTTTGCGGCCGCCC 62.497 66.667 44.42 27.43 41.09 6.13
322 323 4.293648 GGCCCGCAAAGCCGTTTT 62.294 61.111 0.00 0.00 41.41 2.43
323 324 2.279851 GCCCGCAAAGCCGTTTTT 60.280 55.556 0.00 0.00 0.00 1.94
324 325 2.307309 GCCCGCAAAGCCGTTTTTC 61.307 57.895 0.00 0.00 0.00 2.29
325 326 1.663388 CCCGCAAAGCCGTTTTTCC 60.663 57.895 0.00 0.00 0.00 3.13
326 327 2.014018 CCGCAAAGCCGTTTTTCCG 61.014 57.895 0.00 0.00 0.00 4.30
327 328 1.298788 CGCAAAGCCGTTTTTCCGT 60.299 52.632 0.00 0.00 0.00 4.69
328 329 1.536462 CGCAAAGCCGTTTTTCCGTG 61.536 55.000 0.00 0.00 0.00 4.94
329 330 1.817217 GCAAAGCCGTTTTTCCGTGC 61.817 55.000 0.00 0.00 0.00 5.34
330 331 0.248866 CAAAGCCGTTTTTCCGTGCT 60.249 50.000 0.00 0.00 36.41 4.40
331 332 0.248866 AAAGCCGTTTTTCCGTGCTG 60.249 50.000 0.00 0.00 35.52 4.41
332 333 2.677573 AAGCCGTTTTTCCGTGCTGC 62.678 55.000 0.00 0.00 35.52 5.25
333 334 2.718731 CCGTTTTTCCGTGCTGCA 59.281 55.556 0.00 0.00 0.00 4.41
334 335 1.064946 CCGTTTTTCCGTGCTGCAA 59.935 52.632 2.77 0.00 0.00 4.08
335 336 0.526524 CCGTTTTTCCGTGCTGCAAA 60.527 50.000 2.77 0.00 0.00 3.68
336 337 0.570272 CGTTTTTCCGTGCTGCAAAC 59.430 50.000 2.77 3.06 0.00 2.93
337 338 1.634702 GTTTTTCCGTGCTGCAAACA 58.365 45.000 2.77 0.00 0.00 2.83
338 339 1.323235 GTTTTTCCGTGCTGCAAACAC 59.677 47.619 2.77 9.04 34.62 3.32
345 346 1.345410 GTGCTGCAAACACGTTTTGT 58.655 45.000 2.77 0.00 41.74 2.83
353 354 4.411136 CACGTTTTGTGGGTTGGC 57.589 55.556 0.00 0.00 45.21 4.52
354 355 1.587613 CACGTTTTGTGGGTTGGCG 60.588 57.895 0.00 0.00 45.21 5.69
355 356 2.047443 ACGTTTTGTGGGTTGGCGT 61.047 52.632 0.00 0.00 0.00 5.68
356 357 1.139947 CGTTTTGTGGGTTGGCGTT 59.860 52.632 0.00 0.00 0.00 4.84
357 358 0.381089 CGTTTTGTGGGTTGGCGTTA 59.619 50.000 0.00 0.00 0.00 3.18
358 359 1.001158 CGTTTTGTGGGTTGGCGTTAT 60.001 47.619 0.00 0.00 0.00 1.89
359 360 2.225963 CGTTTTGTGGGTTGGCGTTATA 59.774 45.455 0.00 0.00 0.00 0.98
360 361 3.567530 GTTTTGTGGGTTGGCGTTATAC 58.432 45.455 0.00 0.00 0.00 1.47
361 362 1.440708 TTGTGGGTTGGCGTTATACG 58.559 50.000 0.00 0.00 45.88 3.06
362 363 0.391395 TGTGGGTTGGCGTTATACGG 60.391 55.000 1.14 0.00 42.82 4.02
363 364 0.108233 GTGGGTTGGCGTTATACGGA 60.108 55.000 1.14 0.00 42.82 4.69
364 365 0.612229 TGGGTTGGCGTTATACGGAA 59.388 50.000 1.14 0.00 42.82 4.30
365 366 1.209990 TGGGTTGGCGTTATACGGAAT 59.790 47.619 1.14 0.00 42.82 3.01
366 367 1.869132 GGGTTGGCGTTATACGGAATC 59.131 52.381 1.14 0.00 42.82 2.52
367 368 2.484241 GGGTTGGCGTTATACGGAATCT 60.484 50.000 1.14 0.00 42.82 2.40
368 369 2.542595 GGTTGGCGTTATACGGAATCTG 59.457 50.000 1.14 0.00 42.82 2.90
369 370 1.860676 TGGCGTTATACGGAATCTGC 58.139 50.000 1.14 0.00 42.82 4.26
370 371 1.411246 TGGCGTTATACGGAATCTGCT 59.589 47.619 1.14 0.00 42.82 4.24
371 372 2.624364 TGGCGTTATACGGAATCTGCTA 59.376 45.455 1.14 0.00 42.82 3.49
372 373 3.243336 GGCGTTATACGGAATCTGCTAG 58.757 50.000 1.14 0.00 42.82 3.42
373 374 3.057736 GGCGTTATACGGAATCTGCTAGA 60.058 47.826 0.00 0.00 42.82 2.43
374 375 4.543692 GCGTTATACGGAATCTGCTAGAA 58.456 43.478 0.00 0.00 42.82 2.10
375 376 4.980434 GCGTTATACGGAATCTGCTAGAAA 59.020 41.667 0.00 0.00 42.82 2.52
376 377 5.634020 GCGTTATACGGAATCTGCTAGAAAT 59.366 40.000 0.00 0.00 42.82 2.17
377 378 6.400091 GCGTTATACGGAATCTGCTAGAAATG 60.400 42.308 0.00 0.00 42.82 2.32
378 379 6.400091 CGTTATACGGAATCTGCTAGAAATGC 60.400 42.308 0.00 0.00 38.08 3.56
379 380 3.550437 ACGGAATCTGCTAGAAATGCT 57.450 42.857 0.00 0.00 0.00 3.79
380 381 3.462021 ACGGAATCTGCTAGAAATGCTC 58.538 45.455 0.00 0.00 0.00 4.26
401 402 9.974980 ATGCTCTAACTTAGCTATTTTACTCTC 57.025 33.333 0.00 0.00 40.73 3.20
402 403 8.967918 TGCTCTAACTTAGCTATTTTACTCTCA 58.032 33.333 0.00 0.00 40.73 3.27
436 440 6.882610 ATAAATGATACATGCACGTCCATT 57.117 33.333 7.39 7.39 0.00 3.16
465 469 9.715121 AAGTTATATTTTCAACGTAGAGTCCAA 57.285 29.630 0.00 0.00 0.00 3.53
466 470 9.886132 AGTTATATTTTCAACGTAGAGTCCAAT 57.114 29.630 0.00 0.00 0.00 3.16
535 539 6.994421 ATTTGTTGACTCTTGGGGTAAAAT 57.006 33.333 0.00 0.00 0.00 1.82
589 594 2.937149 GAGGGAGGCGTTTGTCTATTTC 59.063 50.000 0.00 0.00 0.00 2.17
592 597 3.756963 GGGAGGCGTTTGTCTATTTCTTT 59.243 43.478 0.00 0.00 0.00 2.52
666 680 1.138661 TGTACGAAACCGGTTTGTCCT 59.861 47.619 36.17 13.30 32.11 3.85
667 681 1.794701 GTACGAAACCGGTTTGTCCTC 59.205 52.381 36.17 20.42 32.11 3.71
668 682 0.178533 ACGAAACCGGTTTGTCCTCA 59.821 50.000 36.17 0.00 32.11 3.86
669 683 0.865769 CGAAACCGGTTTGTCCTCAG 59.134 55.000 36.17 13.85 32.11 3.35
670 684 1.808891 CGAAACCGGTTTGTCCTCAGT 60.809 52.381 36.17 9.93 32.11 3.41
671 685 2.294979 GAAACCGGTTTGTCCTCAGTT 58.705 47.619 36.17 9.09 32.11 3.16
672 686 2.430248 AACCGGTTTGTCCTCAGTTT 57.570 45.000 15.86 0.00 0.00 2.66
673 687 2.430248 ACCGGTTTGTCCTCAGTTTT 57.570 45.000 0.00 0.00 0.00 2.43
674 688 2.730382 ACCGGTTTGTCCTCAGTTTTT 58.270 42.857 0.00 0.00 0.00 1.94
696 710 4.530094 TTTTTCAACGTCTGTACAGCTG 57.470 40.909 18.45 13.48 0.00 4.24
697 711 1.497991 TTCAACGTCTGTACAGCTGC 58.502 50.000 18.45 9.52 0.00 5.25
743 757 1.807573 GCGTACCAGAGCTGCACTC 60.808 63.158 1.02 7.88 46.66 3.51
751 765 3.308014 GAGCTGCACTCCGCCTCTT 62.308 63.158 1.02 0.00 39.75 2.85
752 766 2.359230 GCTGCACTCCGCCTCTTT 60.359 61.111 0.00 0.00 41.33 2.52
754 768 1.916697 GCTGCACTCCGCCTCTTTTC 61.917 60.000 0.00 0.00 41.33 2.29
755 769 1.301677 CTGCACTCCGCCTCTTTTCC 61.302 60.000 0.00 0.00 41.33 3.13
756 770 1.302511 GCACTCCGCCTCTTTTCCA 60.303 57.895 0.00 0.00 32.94 3.53
757 771 0.889186 GCACTCCGCCTCTTTTCCAA 60.889 55.000 0.00 0.00 32.94 3.53
758 772 0.875059 CACTCCGCCTCTTTTCCAAC 59.125 55.000 0.00 0.00 0.00 3.77
759 773 0.765510 ACTCCGCCTCTTTTCCAACT 59.234 50.000 0.00 0.00 0.00 3.16
837 871 0.957395 CAGTGCCTTACCAGGTGCTG 60.957 60.000 0.76 0.00 43.18 4.41
857 891 0.455005 GCGCTAGTACGTCCCTTCTT 59.545 55.000 0.00 0.00 34.88 2.52
858 892 1.533547 GCGCTAGTACGTCCCTTCTTC 60.534 57.143 0.00 0.00 34.88 2.87
859 893 2.015587 CGCTAGTACGTCCCTTCTTCT 58.984 52.381 0.00 0.00 0.00 2.85
1208 1246 4.864334 CCTGGTGCTGATCCGCCC 62.864 72.222 6.66 7.97 34.46 6.13
1417 1455 1.265635 GTTGTTGTGGTGCGCTAATCA 59.734 47.619 9.73 0.00 0.00 2.57
1427 1465 1.103398 GCGCTAATCATGTGGGCCTT 61.103 55.000 4.53 0.00 34.28 4.35
1449 1487 2.618709 AGCACAACAGAAGTTTGCTACC 59.381 45.455 12.74 0.00 43.55 3.18
1525 1563 2.747989 CTCGCTCCACTACTTGTAGTCA 59.252 50.000 10.16 0.84 0.00 3.41
1537 1575 7.010552 CACTACTTGTAGTCATGGCTAATTGAC 59.989 40.741 9.01 0.00 42.03 3.18
1552 1590 7.229306 TGGCTAATTGACCTATTGACATGATTC 59.771 37.037 0.00 0.00 0.00 2.52
1600 1638 9.394477 GACATGATTGTACTTTTTGTTACTTCC 57.606 33.333 0.00 0.00 35.79 3.46
1710 1751 6.977502 TGTTCATCAATTTACGGCCATTATTG 59.022 34.615 2.24 7.02 0.00 1.90
1735 1776 4.021981 TGAGATAGCTAACCATCCATGACG 60.022 45.833 0.00 0.00 0.00 4.35
2021 2062 1.810151 ACAATTCATCGGTTCCCAACG 59.190 47.619 0.00 0.00 0.00 4.10
2105 2146 7.505258 TGTGGGAATTACTCATAAATCATCGA 58.495 34.615 0.00 0.00 0.00 3.59
2113 2154 4.813161 ACTCATAAATCATCGAAGGTGCAG 59.187 41.667 0.00 0.00 0.00 4.41
2115 2156 2.119801 AAATCATCGAAGGTGCAGCT 57.880 45.000 13.85 13.85 0.00 4.24
2116 2157 2.119801 AATCATCGAAGGTGCAGCTT 57.880 45.000 30.06 30.06 0.00 3.74
2117 2158 2.119801 ATCATCGAAGGTGCAGCTTT 57.880 45.000 30.17 13.71 0.00 3.51
2166 2207 1.143813 CCCCCTCCGGTAGAGTACTA 58.856 60.000 0.00 0.00 41.47 1.82
2167 2208 1.073603 CCCCCTCCGGTAGAGTACTAG 59.926 61.905 0.00 0.00 41.47 2.57
2204 2245 2.432510 GGGATCGTGGAAGAACAGAGAT 59.567 50.000 0.00 0.00 0.00 2.75
2228 2269 2.997303 GCGGCGGTGGAAAAATTATTTT 59.003 40.909 9.78 0.00 41.37 1.82
2241 2282 6.882768 AAAATTATTTTGGTGGATGCCCTA 57.117 33.333 1.76 0.00 0.00 3.53
2246 2287 4.817318 TTTTGGTGGATGCCCTATTTTC 57.183 40.909 0.00 0.00 0.00 2.29
2248 2289 3.017048 TGGTGGATGCCCTATTTTCTG 57.983 47.619 0.00 0.00 0.00 3.02
2250 2291 2.310538 GTGGATGCCCTATTTTCTGGG 58.689 52.381 0.00 0.00 46.00 4.45
2295 2336 5.855045 AGTTGAAATTAGGTCAGAACGAGT 58.145 37.500 0.00 0.00 0.00 4.18
2368 2409 1.461091 TTGCCTTGTCGTCTCCTCGT 61.461 55.000 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.197766 TCATAACTGCTCCCACTAGTTGG 59.802 47.826 6.66 6.66 46.47 3.77
5 6 4.471904 TCATAACTGCTCCCACTAGTTG 57.528 45.455 0.00 0.00 36.22 3.16
6 7 5.013183 ACTTTCATAACTGCTCCCACTAGTT 59.987 40.000 0.00 0.00 38.19 2.24
7 8 4.532521 ACTTTCATAACTGCTCCCACTAGT 59.467 41.667 0.00 0.00 0.00 2.57
8 9 5.091261 ACTTTCATAACTGCTCCCACTAG 57.909 43.478 0.00 0.00 0.00 2.57
9 10 5.245531 CAACTTTCATAACTGCTCCCACTA 58.754 41.667 0.00 0.00 0.00 2.74
10 11 4.074970 CAACTTTCATAACTGCTCCCACT 58.925 43.478 0.00 0.00 0.00 4.00
11 12 3.191371 CCAACTTTCATAACTGCTCCCAC 59.809 47.826 0.00 0.00 0.00 4.61
12 13 3.073798 TCCAACTTTCATAACTGCTCCCA 59.926 43.478 0.00 0.00 0.00 4.37
13 14 3.686016 TCCAACTTTCATAACTGCTCCC 58.314 45.455 0.00 0.00 0.00 4.30
14 15 6.995091 AGATATCCAACTTTCATAACTGCTCC 59.005 38.462 0.00 0.00 0.00 4.70
15 16 8.443953 AAGATATCCAACTTTCATAACTGCTC 57.556 34.615 0.00 0.00 0.00 4.26
16 17 8.270744 AGAAGATATCCAACTTTCATAACTGCT 58.729 33.333 0.00 0.00 0.00 4.24
17 18 8.443953 AGAAGATATCCAACTTTCATAACTGC 57.556 34.615 0.00 0.00 0.00 4.40
23 24 8.844244 GCATTGTAGAAGATATCCAACTTTCAT 58.156 33.333 0.00 0.00 0.00 2.57
24 25 7.828717 TGCATTGTAGAAGATATCCAACTTTCA 59.171 33.333 0.00 0.00 0.00 2.69
25 26 8.213518 TGCATTGTAGAAGATATCCAACTTTC 57.786 34.615 0.00 0.00 0.00 2.62
26 27 8.757982 ATGCATTGTAGAAGATATCCAACTTT 57.242 30.769 0.00 0.00 0.00 2.66
27 28 9.851686 TTATGCATTGTAGAAGATATCCAACTT 57.148 29.630 3.54 0.00 0.00 2.66
45 46 7.714377 TGAAAACAAGAACCACAATTATGCATT 59.286 29.630 3.54 0.00 0.00 3.56
46 47 7.215789 TGAAAACAAGAACCACAATTATGCAT 58.784 30.769 3.79 3.79 0.00 3.96
47 48 6.577103 TGAAAACAAGAACCACAATTATGCA 58.423 32.000 0.00 0.00 0.00 3.96
48 49 7.656707 ATGAAAACAAGAACCACAATTATGC 57.343 32.000 0.00 0.00 0.00 3.14
49 50 8.497554 CCAATGAAAACAAGAACCACAATTATG 58.502 33.333 0.00 0.00 0.00 1.90
50 51 8.210265 ACCAATGAAAACAAGAACCACAATTAT 58.790 29.630 0.00 0.00 0.00 1.28
51 52 7.560368 ACCAATGAAAACAAGAACCACAATTA 58.440 30.769 0.00 0.00 0.00 1.40
52 53 6.413892 ACCAATGAAAACAAGAACCACAATT 58.586 32.000 0.00 0.00 0.00 2.32
53 54 5.988287 ACCAATGAAAACAAGAACCACAAT 58.012 33.333 0.00 0.00 0.00 2.71
54 55 5.186797 AGACCAATGAAAACAAGAACCACAA 59.813 36.000 0.00 0.00 0.00 3.33
55 56 4.709397 AGACCAATGAAAACAAGAACCACA 59.291 37.500 0.00 0.00 0.00 4.17
56 57 5.262588 AGACCAATGAAAACAAGAACCAC 57.737 39.130 0.00 0.00 0.00 4.16
57 58 5.930837 AAGACCAATGAAAACAAGAACCA 57.069 34.783 0.00 0.00 0.00 3.67
58 59 7.039313 AGTAAGACCAATGAAAACAAGAACC 57.961 36.000 0.00 0.00 0.00 3.62
61 62 9.793259 AGAATAGTAAGACCAATGAAAACAAGA 57.207 29.630 0.00 0.00 0.00 3.02
64 65 9.162764 GCTAGAATAGTAAGACCAATGAAAACA 57.837 33.333 0.00 0.00 41.93 2.83
65 66 9.162764 TGCTAGAATAGTAAGACCAATGAAAAC 57.837 33.333 0.00 0.00 41.93 2.43
66 67 9.733556 TTGCTAGAATAGTAAGACCAATGAAAA 57.266 29.630 0.00 0.00 38.39 2.29
67 68 9.733556 TTTGCTAGAATAGTAAGACCAATGAAA 57.266 29.630 0.00 0.00 43.99 2.69
68 69 9.383519 CTTTGCTAGAATAGTAAGACCAATGAA 57.616 33.333 0.00 0.00 43.99 2.57
69 70 7.495934 GCTTTGCTAGAATAGTAAGACCAATGA 59.504 37.037 0.00 0.00 43.99 2.57
70 71 7.497249 AGCTTTGCTAGAATAGTAAGACCAATG 59.503 37.037 0.00 0.00 43.99 2.82
71 72 7.569240 AGCTTTGCTAGAATAGTAAGACCAAT 58.431 34.615 0.00 0.00 43.99 3.16
72 73 6.947464 AGCTTTGCTAGAATAGTAAGACCAA 58.053 36.000 0.00 0.00 43.99 3.67
73 74 6.546428 AGCTTTGCTAGAATAGTAAGACCA 57.454 37.500 0.00 0.00 43.99 4.02
74 75 7.201652 CCAAAGCTTTGCTAGAATAGTAAGACC 60.202 40.741 29.93 0.00 43.99 3.85
75 76 7.334671 ACCAAAGCTTTGCTAGAATAGTAAGAC 59.665 37.037 29.93 0.00 43.99 3.01
76 77 7.334421 CACCAAAGCTTTGCTAGAATAGTAAGA 59.666 37.037 29.93 0.00 43.99 2.10
77 78 7.334421 TCACCAAAGCTTTGCTAGAATAGTAAG 59.666 37.037 29.93 15.52 43.99 2.34
78 79 7.165485 TCACCAAAGCTTTGCTAGAATAGTAA 58.835 34.615 29.93 6.68 41.59 2.24
79 80 6.707290 TCACCAAAGCTTTGCTAGAATAGTA 58.293 36.000 29.93 8.96 41.93 1.82
80 81 5.560724 TCACCAAAGCTTTGCTAGAATAGT 58.439 37.500 29.93 18.02 41.93 2.12
81 82 6.500684 TTCACCAAAGCTTTGCTAGAATAG 57.499 37.500 29.93 17.43 38.25 1.73
82 83 7.362920 GGAATTCACCAAAGCTTTGCTAGAATA 60.363 37.037 30.50 18.17 38.25 1.75
83 84 5.990120 ATTCACCAAAGCTTTGCTAGAAT 57.010 34.783 29.93 28.64 38.25 2.40
84 85 5.278957 GGAATTCACCAAAGCTTTGCTAGAA 60.279 40.000 29.93 27.95 38.25 2.10
85 86 4.218417 GGAATTCACCAAAGCTTTGCTAGA 59.782 41.667 29.93 22.75 38.25 2.43
86 87 4.219288 AGGAATTCACCAAAGCTTTGCTAG 59.781 41.667 29.93 21.12 38.25 3.42
87 88 4.151883 AGGAATTCACCAAAGCTTTGCTA 58.848 39.130 29.93 15.99 38.25 3.49
88 89 2.967887 AGGAATTCACCAAAGCTTTGCT 59.032 40.909 29.93 16.80 42.56 3.91
89 90 3.391506 AGGAATTCACCAAAGCTTTGC 57.608 42.857 29.93 15.99 36.86 3.68
90 91 6.029346 ACATAGGAATTCACCAAAGCTTTG 57.971 37.500 28.69 28.69 37.90 2.77
91 92 7.068716 GGATACATAGGAATTCACCAAAGCTTT 59.931 37.037 5.69 5.69 0.00 3.51
92 93 6.547510 GGATACATAGGAATTCACCAAAGCTT 59.452 38.462 7.93 0.00 0.00 3.74
93 94 6.064717 GGATACATAGGAATTCACCAAAGCT 58.935 40.000 7.93 0.00 0.00 3.74
94 95 5.827797 TGGATACATAGGAATTCACCAAAGC 59.172 40.000 7.93 0.00 46.17 3.51
112 113 5.457140 TGCTTTTTCAACGACATTGGATAC 58.543 37.500 0.00 0.00 38.98 2.24
113 114 5.697473 TGCTTTTTCAACGACATTGGATA 57.303 34.783 0.00 0.00 38.98 2.59
114 115 4.582701 TGCTTTTTCAACGACATTGGAT 57.417 36.364 0.00 0.00 38.98 3.41
115 116 4.377839 TTGCTTTTTCAACGACATTGGA 57.622 36.364 0.00 0.00 38.98 3.53
116 117 4.803088 TCTTTGCTTTTTCAACGACATTGG 59.197 37.500 0.00 0.00 38.98 3.16
117 118 5.947503 TCTTTGCTTTTTCAACGACATTG 57.052 34.783 0.00 0.00 39.94 2.82
118 119 6.959671 TTTCTTTGCTTTTTCAACGACATT 57.040 29.167 0.00 0.00 0.00 2.71
119 120 6.509997 GCATTTCTTTGCTTTTTCAACGACAT 60.510 34.615 0.00 0.00 39.57 3.06
120 121 5.220378 GCATTTCTTTGCTTTTTCAACGACA 60.220 36.000 0.00 0.00 39.57 4.35
121 122 5.190342 GCATTTCTTTGCTTTTTCAACGAC 58.810 37.500 0.00 0.00 39.57 4.34
122 123 4.867047 TGCATTTCTTTGCTTTTTCAACGA 59.133 33.333 0.00 0.00 43.18 3.85
123 124 5.141355 TGCATTTCTTTGCTTTTTCAACG 57.859 34.783 0.00 0.00 43.18 4.10
124 125 7.974243 AAATGCATTTCTTTGCTTTTTCAAC 57.026 28.000 18.99 0.00 43.40 3.18
138 139 8.336806 TCAATTTGACACAAGAAAATGCATTTC 58.663 29.630 24.28 16.84 46.45 2.17
139 140 8.211116 TCAATTTGACACAAGAAAATGCATTT 57.789 26.923 18.99 18.99 0.00 2.32
140 141 7.789273 TCAATTTGACACAAGAAAATGCATT 57.211 28.000 5.99 5.99 0.00 3.56
141 142 7.496591 ACTTCAATTTGACACAAGAAAATGCAT 59.503 29.630 0.00 0.00 0.00 3.96
142 143 6.817641 ACTTCAATTTGACACAAGAAAATGCA 59.182 30.769 0.00 0.00 0.00 3.96
143 144 7.121272 CACTTCAATTTGACACAAGAAAATGC 58.879 34.615 0.00 0.00 0.00 3.56
144 145 7.121272 GCACTTCAATTTGACACAAGAAAATG 58.879 34.615 0.00 0.00 0.00 2.32
145 146 6.817641 TGCACTTCAATTTGACACAAGAAAAT 59.182 30.769 0.00 0.00 0.00 1.82
146 147 6.162079 TGCACTTCAATTTGACACAAGAAAA 58.838 32.000 0.00 0.00 0.00 2.29
147 148 5.718146 TGCACTTCAATTTGACACAAGAAA 58.282 33.333 0.00 0.00 0.00 2.52
148 149 5.321959 TGCACTTCAATTTGACACAAGAA 57.678 34.783 0.00 0.00 0.00 2.52
149 150 4.979943 TGCACTTCAATTTGACACAAGA 57.020 36.364 0.00 0.00 0.00 3.02
150 151 6.592798 ATTTGCACTTCAATTTGACACAAG 57.407 33.333 0.00 0.00 34.12 3.16
151 152 6.981762 AATTTGCACTTCAATTTGACACAA 57.018 29.167 0.00 0.00 34.12 3.33
152 153 6.981762 AAATTTGCACTTCAATTTGACACA 57.018 29.167 6.12 0.00 34.12 3.72
153 154 6.687958 CCAAAATTTGCACTTCAATTTGACAC 59.312 34.615 7.42 0.00 37.06 3.67
154 155 6.596888 TCCAAAATTTGCACTTCAATTTGACA 59.403 30.769 7.42 0.00 37.06 3.58
155 156 7.014092 TCCAAAATTTGCACTTCAATTTGAC 57.986 32.000 7.42 0.00 37.06 3.18
156 157 7.804843 ATCCAAAATTTGCACTTCAATTTGA 57.195 28.000 7.42 0.00 37.06 2.69
157 158 8.747666 CAAATCCAAAATTTGCACTTCAATTTG 58.252 29.630 7.42 4.31 35.75 2.32
158 159 8.859517 CAAATCCAAAATTTGCACTTCAATTT 57.140 26.923 0.00 1.77 34.12 1.82
169 170 2.160022 CGGCCTGCAAATCCAAAATTTG 59.840 45.455 0.00 0.00 40.80 2.32
170 171 2.425539 CGGCCTGCAAATCCAAAATTT 58.574 42.857 0.00 0.00 0.00 1.82
171 172 1.338960 CCGGCCTGCAAATCCAAAATT 60.339 47.619 0.00 0.00 0.00 1.82
172 173 0.249955 CCGGCCTGCAAATCCAAAAT 59.750 50.000 0.00 0.00 0.00 1.82
173 174 1.670590 CCGGCCTGCAAATCCAAAA 59.329 52.632 0.00 0.00 0.00 2.44
174 175 2.941616 GCCGGCCTGCAAATCCAAA 61.942 57.895 18.11 0.00 0.00 3.28
175 176 3.381136 GCCGGCCTGCAAATCCAA 61.381 61.111 18.11 0.00 0.00 3.53
204 205 4.697756 TTTGCGGGGTCTGCTCGG 62.698 66.667 0.30 0.00 0.00 4.63
205 206 3.121030 CTTTGCGGGGTCTGCTCG 61.121 66.667 0.30 0.00 0.00 5.03
206 207 3.435186 GCTTTGCGGGGTCTGCTC 61.435 66.667 0.30 0.00 0.00 4.26
207 208 3.958860 AGCTTTGCGGGGTCTGCT 61.959 61.111 0.30 0.00 0.00 4.24
208 209 3.741476 CAGCTTTGCGGGGTCTGC 61.741 66.667 0.00 0.00 0.00 4.26
209 210 2.032528 TCAGCTTTGCGGGGTCTG 59.967 61.111 0.00 0.00 0.00 3.51
210 211 2.032681 GTCAGCTTTGCGGGGTCT 59.967 61.111 0.00 0.00 0.00 3.85
211 212 3.056328 GGTCAGCTTTGCGGGGTC 61.056 66.667 0.00 0.00 0.00 4.46
212 213 4.660938 GGGTCAGCTTTGCGGGGT 62.661 66.667 0.00 0.00 0.00 4.95
214 215 3.599285 TACGGGTCAGCTTTGCGGG 62.599 63.158 0.00 0.00 0.00 6.13
215 216 1.231958 TTTACGGGTCAGCTTTGCGG 61.232 55.000 0.00 0.00 0.00 5.69
216 217 0.589223 TTTTACGGGTCAGCTTTGCG 59.411 50.000 0.00 0.00 0.00 4.85
217 218 2.785713 TTTTTACGGGTCAGCTTTGC 57.214 45.000 0.00 0.00 0.00 3.68
244 245 9.850628 CGGACTCGTATAAAAGAATATTATGGA 57.149 33.333 0.00 0.00 0.00 3.41
269 270 2.415697 AAATCAGAACCCGCAAAACG 57.584 45.000 0.00 0.00 43.15 3.60
270 271 2.220824 GCAAAATCAGAACCCGCAAAAC 59.779 45.455 0.00 0.00 0.00 2.43
271 272 2.478831 GCAAAATCAGAACCCGCAAAA 58.521 42.857 0.00 0.00 0.00 2.44
272 273 1.601663 CGCAAAATCAGAACCCGCAAA 60.602 47.619 0.00 0.00 0.00 3.68
273 274 0.039617 CGCAAAATCAGAACCCGCAA 60.040 50.000 0.00 0.00 0.00 4.85
274 275 1.578926 CGCAAAATCAGAACCCGCA 59.421 52.632 0.00 0.00 0.00 5.69
275 276 1.154035 CCGCAAAATCAGAACCCGC 60.154 57.895 0.00 0.00 0.00 6.13
276 277 1.154035 GCCGCAAAATCAGAACCCG 60.154 57.895 0.00 0.00 0.00 5.28
277 278 1.215382 GGCCGCAAAATCAGAACCC 59.785 57.895 0.00 0.00 0.00 4.11
278 279 1.154035 CGGCCGCAAAATCAGAACC 60.154 57.895 14.67 0.00 0.00 3.62
279 280 1.801512 GCGGCCGCAAAATCAGAAC 60.802 57.895 43.55 10.50 41.49 3.01
280 281 2.566010 GCGGCCGCAAAATCAGAA 59.434 55.556 43.55 0.00 41.49 3.02
281 282 3.439540 GGCGGCCGCAAAATCAGA 61.440 61.111 46.88 0.00 44.11 3.27
282 283 4.496927 GGGCGGCCGCAAAATCAG 62.497 66.667 46.88 8.45 44.11 2.90
305 306 3.800685 AAAAACGGCTTTGCGGGCC 62.801 57.895 0.00 0.00 45.57 5.80
306 307 2.279851 AAAAACGGCTTTGCGGGC 60.280 55.556 2.48 0.00 33.14 6.13
307 308 1.663388 GGAAAAACGGCTTTGCGGG 60.663 57.895 2.48 0.00 33.14 6.13
308 309 2.014018 CGGAAAAACGGCTTTGCGG 61.014 57.895 14.63 1.66 43.73 5.69
309 310 3.521417 CGGAAAAACGGCTTTGCG 58.479 55.556 10.09 10.09 42.37 4.85
310 311 1.817217 GCACGGAAAAACGGCTTTGC 61.817 55.000 0.00 0.00 38.39 3.68
311 312 0.248866 AGCACGGAAAAACGGCTTTG 60.249 50.000 0.00 0.00 37.17 2.77
312 313 0.248866 CAGCACGGAAAAACGGCTTT 60.249 50.000 0.00 0.00 37.96 3.51
313 314 1.358759 CAGCACGGAAAAACGGCTT 59.641 52.632 0.00 0.00 37.96 4.35
314 315 3.030652 CAGCACGGAAAAACGGCT 58.969 55.556 0.00 0.00 39.67 5.52
315 316 2.729491 GCAGCACGGAAAAACGGC 60.729 61.111 0.00 0.00 38.39 5.68
316 317 0.526524 TTTGCAGCACGGAAAAACGG 60.527 50.000 0.00 0.00 38.39 4.44
317 318 0.570272 GTTTGCAGCACGGAAAAACG 59.430 50.000 0.00 0.00 36.61 3.60
318 319 1.323235 GTGTTTGCAGCACGGAAAAAC 59.677 47.619 0.00 0.00 36.61 2.43
319 320 1.634702 GTGTTTGCAGCACGGAAAAA 58.365 45.000 0.00 0.00 36.61 1.94
320 321 3.337398 GTGTTTGCAGCACGGAAAA 57.663 47.368 0.00 0.00 36.61 2.29
326 327 1.058979 CACAAAACGTGTTTGCAGCAC 59.941 47.619 17.43 11.90 38.92 4.40
327 328 1.344458 CACAAAACGTGTTTGCAGCA 58.656 45.000 17.43 0.00 38.92 4.41
328 329 0.644843 CCACAAAACGTGTTTGCAGC 59.355 50.000 17.43 0.00 44.78 5.25
329 330 1.276415 CCCACAAAACGTGTTTGCAG 58.724 50.000 17.43 12.48 44.78 4.41
330 331 0.603569 ACCCACAAAACGTGTTTGCA 59.396 45.000 17.43 0.00 44.78 4.08
331 332 1.391826 CAACCCACAAAACGTGTTTGC 59.608 47.619 17.43 0.00 44.78 3.68
332 333 1.996191 CCAACCCACAAAACGTGTTTG 59.004 47.619 16.48 16.48 44.78 2.93
333 334 1.673329 GCCAACCCACAAAACGTGTTT 60.673 47.619 0.00 0.00 44.78 2.83
334 335 0.108567 GCCAACCCACAAAACGTGTT 60.109 50.000 0.00 0.00 44.78 3.32
335 336 1.513622 GCCAACCCACAAAACGTGT 59.486 52.632 0.00 0.00 44.78 4.49
336 337 1.587613 CGCCAACCCACAAAACGTG 60.588 57.895 0.00 0.00 45.92 4.49
337 338 1.596895 AACGCCAACCCACAAAACGT 61.597 50.000 0.00 0.00 0.00 3.99
338 339 0.381089 TAACGCCAACCCACAAAACG 59.619 50.000 0.00 0.00 0.00 3.60
339 340 2.804697 ATAACGCCAACCCACAAAAC 57.195 45.000 0.00 0.00 0.00 2.43
340 341 2.225963 CGTATAACGCCAACCCACAAAA 59.774 45.455 0.00 0.00 33.65 2.44
341 342 1.805345 CGTATAACGCCAACCCACAAA 59.195 47.619 0.00 0.00 33.65 2.83
342 343 1.440708 CGTATAACGCCAACCCACAA 58.559 50.000 0.00 0.00 33.65 3.33
343 344 0.391395 CCGTATAACGCCAACCCACA 60.391 55.000 0.00 0.00 40.91 4.17
344 345 0.108233 TCCGTATAACGCCAACCCAC 60.108 55.000 0.00 0.00 40.91 4.61
345 346 0.612229 TTCCGTATAACGCCAACCCA 59.388 50.000 0.00 0.00 40.91 4.51
346 347 1.869132 GATTCCGTATAACGCCAACCC 59.131 52.381 0.00 0.00 40.91 4.11
347 348 2.542595 CAGATTCCGTATAACGCCAACC 59.457 50.000 0.00 0.00 40.91 3.77
348 349 2.033151 GCAGATTCCGTATAACGCCAAC 60.033 50.000 0.00 0.00 40.91 3.77
349 350 2.159014 AGCAGATTCCGTATAACGCCAA 60.159 45.455 0.00 0.00 40.91 4.52
350 351 1.411246 AGCAGATTCCGTATAACGCCA 59.589 47.619 0.00 0.00 40.91 5.69
351 352 2.150397 AGCAGATTCCGTATAACGCC 57.850 50.000 0.00 0.00 40.91 5.68
352 353 4.156664 TCTAGCAGATTCCGTATAACGC 57.843 45.455 0.00 0.00 40.91 4.84
353 354 6.400091 GCATTTCTAGCAGATTCCGTATAACG 60.400 42.308 0.00 0.00 42.11 3.18
354 355 6.647067 AGCATTTCTAGCAGATTCCGTATAAC 59.353 38.462 0.00 0.00 0.00 1.89
355 356 6.759272 AGCATTTCTAGCAGATTCCGTATAA 58.241 36.000 0.00 0.00 0.00 0.98
356 357 6.209589 AGAGCATTTCTAGCAGATTCCGTATA 59.790 38.462 0.00 0.00 33.23 1.47
357 358 5.011533 AGAGCATTTCTAGCAGATTCCGTAT 59.988 40.000 0.00 0.00 33.23 3.06
358 359 4.342378 AGAGCATTTCTAGCAGATTCCGTA 59.658 41.667 0.00 0.00 33.23 4.02
359 360 3.133721 AGAGCATTTCTAGCAGATTCCGT 59.866 43.478 0.00 0.00 33.23 4.69
360 361 3.726607 AGAGCATTTCTAGCAGATTCCG 58.273 45.455 0.00 0.00 33.23 4.30
361 362 6.287525 AGTTAGAGCATTTCTAGCAGATTCC 58.712 40.000 0.00 0.00 40.84 3.01
362 363 7.784633 AAGTTAGAGCATTTCTAGCAGATTC 57.215 36.000 0.00 0.00 40.84 2.52
363 364 7.440856 GCTAAGTTAGAGCATTTCTAGCAGATT 59.559 37.037 14.27 0.00 40.84 2.40
364 365 6.928492 GCTAAGTTAGAGCATTTCTAGCAGAT 59.072 38.462 14.27 0.00 40.84 2.90
365 366 6.097554 AGCTAAGTTAGAGCATTTCTAGCAGA 59.902 38.462 14.27 0.00 40.84 4.26
366 367 6.279882 AGCTAAGTTAGAGCATTTCTAGCAG 58.720 40.000 14.27 0.00 40.84 4.24
367 368 6.227298 AGCTAAGTTAGAGCATTTCTAGCA 57.773 37.500 14.27 0.00 40.84 3.49
368 369 8.825667 AATAGCTAAGTTAGAGCATTTCTAGC 57.174 34.615 14.27 0.00 42.69 3.42
375 376 9.974980 GAGAGTAAAATAGCTAAGTTAGAGCAT 57.025 33.333 14.27 0.38 42.69 3.79
376 377 8.967918 TGAGAGTAAAATAGCTAAGTTAGAGCA 58.032 33.333 14.27 0.00 42.69 4.26
377 378 9.804758 TTGAGAGTAAAATAGCTAAGTTAGAGC 57.195 33.333 14.27 1.50 40.42 4.09
413 417 6.882610 AATGGACGTGCATGTATCATTTAT 57.117 33.333 23.89 0.17 0.00 1.40
571 576 5.372547 AAAAGAAATAGACAAACGCCTCC 57.627 39.130 0.00 0.00 0.00 4.30
592 597 4.538746 ACCGGTTTGTCCAAAAAGAAAA 57.461 36.364 0.00 0.00 35.57 2.29
675 689 3.242608 GCAGCTGTACAGACGTTGAAAAA 60.243 43.478 27.08 0.00 0.00 1.94
676 690 2.286833 GCAGCTGTACAGACGTTGAAAA 59.713 45.455 27.08 0.00 0.00 2.29
681 695 1.270305 ACATGCAGCTGTACAGACGTT 60.270 47.619 27.08 5.48 0.00 3.99
692 706 1.342174 CTTGTTCCCAAACATGCAGCT 59.658 47.619 0.00 0.00 44.59 4.24
695 709 2.964464 ACATCTTGTTCCCAAACATGCA 59.036 40.909 0.00 0.00 44.59 3.96
696 710 3.578688 GACATCTTGTTCCCAAACATGC 58.421 45.455 0.00 0.00 44.59 4.06
697 711 3.501828 TCGACATCTTGTTCCCAAACATG 59.498 43.478 0.00 0.00 44.59 3.21
743 757 1.087501 GCTAGTTGGAAAAGAGGCGG 58.912 55.000 0.00 0.00 0.00 6.13
745 759 1.470494 GCAGCTAGTTGGAAAAGAGGC 59.530 52.381 8.78 0.00 0.00 4.70
747 761 3.406764 AGTGCAGCTAGTTGGAAAAGAG 58.593 45.455 8.78 0.00 0.00 2.85
748 762 3.403038 GAGTGCAGCTAGTTGGAAAAGA 58.597 45.455 8.78 0.00 0.00 2.52
749 763 2.485814 GGAGTGCAGCTAGTTGGAAAAG 59.514 50.000 8.78 0.00 0.00 2.27
751 765 1.608025 CGGAGTGCAGCTAGTTGGAAA 60.608 52.381 8.78 0.00 0.00 3.13
752 766 0.037326 CGGAGTGCAGCTAGTTGGAA 60.037 55.000 8.78 0.00 0.00 3.53
754 768 0.737715 GTCGGAGTGCAGCTAGTTGG 60.738 60.000 8.78 0.00 0.00 3.77
755 769 0.244994 AGTCGGAGTGCAGCTAGTTG 59.755 55.000 1.58 1.58 0.00 3.16
756 770 0.528470 GAGTCGGAGTGCAGCTAGTT 59.472 55.000 0.00 0.00 0.00 2.24
757 771 1.649390 CGAGTCGGAGTGCAGCTAGT 61.649 60.000 4.10 0.00 0.00 2.57
758 772 1.063327 CGAGTCGGAGTGCAGCTAG 59.937 63.158 4.10 0.00 0.00 3.42
759 773 3.188011 CGAGTCGGAGTGCAGCTA 58.812 61.111 4.10 0.00 0.00 3.32
789 808 1.396996 CAATTTAACGAGGACAGGCGG 59.603 52.381 0.00 0.00 0.00 6.13
837 871 1.065436 GAAGGGACGTACTAGCGCC 59.935 63.158 2.29 0.00 34.88 6.53
857 891 4.280174 ACGTACTAGCACTCTTTTTCCAGA 59.720 41.667 0.00 0.00 0.00 3.86
858 892 4.557205 ACGTACTAGCACTCTTTTTCCAG 58.443 43.478 0.00 0.00 0.00 3.86
859 893 4.595762 ACGTACTAGCACTCTTTTTCCA 57.404 40.909 0.00 0.00 0.00 3.53
1106 1144 3.130516 TCTGCTACACTGATTAGGTTCCG 59.869 47.826 0.00 0.00 0.00 4.30
1417 1455 0.112218 TGTTGTGCTAAGGCCCACAT 59.888 50.000 12.56 0.00 41.16 3.21
1427 1465 3.813166 GGTAGCAAACTTCTGTTGTGCTA 59.187 43.478 14.98 14.98 42.61 3.49
1449 1487 3.001330 GTCGGACTCAGTCAAACTTTGTG 59.999 47.826 7.24 0.00 33.68 3.33
1525 1563 6.604171 TCATGTCAATAGGTCAATTAGCCAT 58.396 36.000 0.00 0.00 0.00 4.40
1566 1604 2.080693 GTACAATCATGTCACCGGCAA 58.919 47.619 0.00 0.00 41.05 4.52
1567 1605 1.277842 AGTACAATCATGTCACCGGCA 59.722 47.619 0.00 0.00 41.05 5.69
1572 1610 9.730420 AAGTAACAAAAAGTACAATCATGTCAC 57.270 29.630 0.00 0.00 41.05 3.67
1575 1613 8.908903 TGGAAGTAACAAAAAGTACAATCATGT 58.091 29.630 0.00 0.00 43.74 3.21
1684 1725 5.596836 AATGGCCGTAAATTGATGAACAT 57.403 34.783 0.00 0.00 0.00 2.71
1710 1751 5.698545 GTCATGGATGGTTAGCTATCTCAAC 59.301 44.000 0.00 0.00 33.69 3.18
1735 1776 3.515901 ACCCTTCTAGTGAATGACCACTC 59.484 47.826 0.00 0.00 45.37 3.51
1912 1953 8.992073 CATTTCATGATGAATCTAATCGTACCA 58.008 33.333 8.90 0.00 36.11 3.25
1987 2028 6.092092 CGATGAATTGTGGCTTTATGAACAA 58.908 36.000 0.00 0.00 36.98 2.83
1998 2039 0.455815 GGGAACCGATGAATTGTGGC 59.544 55.000 0.00 0.00 40.86 5.01
2021 2062 1.721133 CTTCGTTTGCGGTGCGTTC 60.721 57.895 0.00 0.00 38.89 3.95
2077 2118 6.969043 TGATTTATGAGTAATTCCCACAGGT 58.031 36.000 0.00 0.00 0.00 4.00
2079 2120 7.657354 TCGATGATTTATGAGTAATTCCCACAG 59.343 37.037 0.00 0.00 0.00 3.66
2105 2146 2.034124 ACATCAACAAAGCTGCACCTT 58.966 42.857 1.02 0.00 0.00 3.50
2113 2154 4.439289 GGATGCCTTCTACATCAACAAAGC 60.439 45.833 6.13 0.00 44.68 3.51
2115 2156 4.016444 GGGATGCCTTCTACATCAACAAA 58.984 43.478 0.00 0.00 44.68 2.83
2116 2157 3.266772 AGGGATGCCTTCTACATCAACAA 59.733 43.478 0.00 0.00 44.68 2.83
2117 2158 2.846206 AGGGATGCCTTCTACATCAACA 59.154 45.455 0.00 0.00 44.68 3.33
2166 2207 0.622665 CCCATCTGGAGGCTTGTTCT 59.377 55.000 0.00 0.00 37.39 3.01
2167 2208 0.620556 TCCCATCTGGAGGCTTGTTC 59.379 55.000 0.00 0.00 38.61 3.18
2189 2230 2.160417 CCGCAAATCTCTGTTCTTCCAC 59.840 50.000 0.00 0.00 0.00 4.02
2204 2245 0.105039 AATTTTTCCACCGCCGCAAA 59.895 45.000 0.00 0.00 0.00 3.68
2228 2269 2.358090 CCAGAAAATAGGGCATCCACCA 60.358 50.000 0.00 0.00 34.83 4.17
2295 2336 3.636231 CTTGAGGGCCCCACGTGA 61.636 66.667 21.43 0.00 0.00 4.35
2299 2340 1.077429 GATGTCTTGAGGGCCCCAC 60.077 63.158 21.43 14.40 0.00 4.61
2343 2384 2.594592 ACGACAAGGCAACAGGGC 60.595 61.111 0.00 0.00 43.80 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.