Multiple sequence alignment - TraesCS4B01G292900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G292900 chr4B 100.000 5466 0 0 1 5466 578223081 578228546 0.000000e+00 10094.0
1 TraesCS4B01G292900 chr4B 92.089 316 24 1 3343 3658 101149073 101148759 1.400000e-120 444.0
2 TraesCS4B01G292900 chr4B 91.772 316 24 2 3343 3658 567457712 567457399 6.500000e-119 438.0
3 TraesCS4B01G292900 chr4B 96.429 56 2 0 2841 2896 22562401 22562456 5.830000e-15 93.5
4 TraesCS4B01G292900 chr4D 91.626 2484 111 48 478 2900 462748047 462745600 0.000000e+00 3345.0
5 TraesCS4B01G292900 chr4D 91.827 1199 59 21 4040 5214 462744653 462743470 0.000000e+00 1635.0
6 TraesCS4B01G292900 chr4D 94.421 484 12 9 1 474 462752223 462751745 0.000000e+00 730.0
7 TraesCS4B01G292900 chr4D 96.821 346 10 1 3657 4001 462745079 462744734 1.320000e-160 577.0
8 TraesCS4B01G292900 chr4D 93.377 302 14 6 3049 3344 462745381 462745080 5.020000e-120 442.0
9 TraesCS4B01G292900 chr4D 90.661 257 13 5 5212 5466 462743195 462742948 1.130000e-86 331.0
10 TraesCS4B01G292900 chr4D 96.429 56 2 0 2841 2896 456678504 456678449 5.830000e-15 93.5
11 TraesCS4B01G292900 chr4A 91.197 1829 97 30 3657 5440 6635446 6633637 0.000000e+00 2427.0
12 TraesCS4B01G292900 chr4A 92.284 985 47 9 1459 2431 6637270 6636303 0.000000e+00 1371.0
13 TraesCS4B01G292900 chr4A 83.321 1367 98 61 1 1289 6638734 6637420 0.000000e+00 1142.0
14 TraesCS4B01G292900 chr4A 80.110 905 70 48 2485 3344 6636286 6635447 1.710000e-159 573.0
15 TraesCS4B01G292900 chr4A 96.429 56 2 0 2841 2896 68455922 68455867 5.830000e-15 93.5
16 TraesCS4B01G292900 chr7A 94.921 315 14 2 3344 3656 541334485 541334171 4.920000e-135 492.0
17 TraesCS4B01G292900 chr7A 88.991 109 12 0 4043 4151 686020111 686020003 9.550000e-28 135.0
18 TraesCS4B01G292900 chr5B 93.691 317 20 0 3343 3659 530609039 530608723 4.950000e-130 475.0
19 TraesCS4B01G292900 chr6B 95.578 294 12 1 3343 3636 718339148 718338856 2.310000e-128 470.0
20 TraesCS4B01G292900 chr1B 93.269 312 21 0 3344 3655 475486687 475486998 1.390000e-125 460.0
21 TraesCS4B01G292900 chr2B 93.182 308 21 0 3348 3655 129276643 129276336 2.320000e-123 453.0
22 TraesCS4B01G292900 chr3B 92.089 316 23 2 3343 3658 559536769 559536456 1.400000e-120 444.0
23 TraesCS4B01G292900 chr3B 84.821 112 15 2 4041 4151 666446827 666446937 1.610000e-20 111.0
24 TraesCS4B01G292900 chr3B 86.441 59 8 0 2818 2876 666445620 666445678 1.270000e-06 65.8
25 TraesCS4B01G292900 chr7B 92.038 314 24 1 3343 3656 544469761 544470073 1.810000e-119 440.0
26 TraesCS4B01G292900 chr7B 88.991 109 12 0 4043 4151 667748919 667749027 9.550000e-28 135.0
27 TraesCS4B01G292900 chr7B 90.741 54 5 0 2826 2879 667748160 667748213 7.590000e-09 73.1
28 TraesCS4B01G292900 chr7D 88.073 109 13 0 4043 4151 593237227 593237119 4.440000e-26 130.0
29 TraesCS4B01G292900 chr7D 89.091 55 6 0 2829 2883 593237947 593237893 9.820000e-08 69.4
30 TraesCS4B01G292900 chr6D 88.182 110 12 1 4037 4145 291235617 291235726 4.440000e-26 130.0
31 TraesCS4B01G292900 chr3D 86.607 112 13 2 4041 4151 504732930 504733040 7.440000e-24 122.0
32 TraesCS4B01G292900 chr3A 85.714 112 14 2 4041 4151 642921982 642922092 3.460000e-22 117.0
33 TraesCS4B01G292900 chr3A 89.831 59 6 0 2818 2876 642920565 642920623 5.870000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G292900 chr4B 578223081 578228546 5465 False 10094.000000 10094 100.000000 1 5466 1 chr4B.!!$F2 5465
1 TraesCS4B01G292900 chr4D 462742948 462752223 9275 True 1176.666667 3345 93.122167 1 5466 6 chr4D.!!$R2 5465
2 TraesCS4B01G292900 chr4A 6633637 6638734 5097 True 1378.250000 2427 86.728000 1 5440 4 chr4A.!!$R2 5439

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
344 380 0.040425 GCGGTTGCTGTTGAATCGTT 60.040 50.0 0.00 0.0 38.39 3.85 F
1155 4945 0.099968 CGTCTTCTTCGCCCATCGTA 59.900 55.0 0.00 0.0 39.67 3.43 F
2699 6566 0.106519 TAGGGGCCTGGTACGTAGTC 60.107 60.0 0.84 0.0 43.93 2.59 F
3472 7453 0.178964 CCACACCTTCCCACACCAAT 60.179 55.0 0.00 0.0 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1624 5453 0.685097 TGGTGGTGGTACTTGAGCTC 59.315 55.0 6.82 6.82 0.00 4.09 R
2831 6709 0.395036 TCTCCTCCAGCTCCTTCTCG 60.395 60.0 0.00 0.00 0.00 4.04 R
3571 7552 0.105964 TGCCAAACAGCCCCAACTTA 60.106 50.0 0.00 0.00 0.00 2.24 R
4536 8572 0.106894 TTGCACCACCGTACATGTGA 59.893 50.0 9.11 0.00 35.74 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.824166 CCCGTCCGTACACGAGCG 62.824 72.222 7.27 7.08 42.69 5.03
147 160 1.056660 AACCACGTCAACTCCATCCT 58.943 50.000 0.00 0.00 0.00 3.24
202 220 2.026038 CGGACGTGACGTTTAAAGATCG 59.974 50.000 13.44 3.26 41.37 3.69
208 226 4.436847 CGTGACGTTTAAAGATCGATCGAT 59.563 41.667 29.76 29.76 37.59 3.59
288 319 2.426381 TCCCATACGTACGTACATGCAA 59.574 45.455 28.99 13.29 33.01 4.08
344 380 0.040425 GCGGTTGCTGTTGAATCGTT 60.040 50.000 0.00 0.00 38.39 3.85
362 398 3.498397 TCGTTTGCTTGATCTTGGACTTC 59.502 43.478 0.00 0.00 0.00 3.01
363 399 3.665323 CGTTTGCTTGATCTTGGACTTCG 60.665 47.826 0.00 0.00 0.00 3.79
459 495 2.460918 ACGTGAGTGAGAGAACAAACG 58.539 47.619 0.00 0.00 46.97 3.60
475 511 6.693978 AGAACAAACGCCAACACTAAAATAAC 59.306 34.615 0.00 0.00 0.00 1.89
476 512 5.283294 ACAAACGCCAACACTAAAATAACC 58.717 37.500 0.00 0.00 0.00 2.85
482 4212 4.561938 GCCAACACTAAAATAACCAACCCC 60.562 45.833 0.00 0.00 0.00 4.95
483 4213 4.321378 CCAACACTAAAATAACCAACCCCG 60.321 45.833 0.00 0.00 0.00 5.73
557 4291 2.054363 CGCTGCAAGACGTATCTATGG 58.946 52.381 0.00 0.00 34.07 2.74
558 4292 1.795286 GCTGCAAGACGTATCTATGGC 59.205 52.381 0.00 0.00 34.07 4.40
712 4476 4.943705 ACAGTAGAACCGCATTCATTCATT 59.056 37.500 0.92 0.00 40.09 2.57
713 4477 5.065218 ACAGTAGAACCGCATTCATTCATTC 59.935 40.000 0.92 0.00 40.09 2.67
714 4478 5.065090 CAGTAGAACCGCATTCATTCATTCA 59.935 40.000 0.92 0.00 40.09 2.57
715 4479 5.824624 AGTAGAACCGCATTCATTCATTCAT 59.175 36.000 0.92 0.00 40.09 2.57
716 4480 5.179045 AGAACCGCATTCATTCATTCATC 57.821 39.130 0.92 0.00 40.09 2.92
717 4481 3.614159 ACCGCATTCATTCATTCATCG 57.386 42.857 0.00 0.00 0.00 3.84
718 4482 3.205338 ACCGCATTCATTCATTCATCGA 58.795 40.909 0.00 0.00 0.00 3.59
719 4483 3.002656 ACCGCATTCATTCATTCATCGAC 59.997 43.478 0.00 0.00 0.00 4.20
720 4484 3.249320 CCGCATTCATTCATTCATCGACT 59.751 43.478 0.00 0.00 0.00 4.18
721 4485 4.452447 CGCATTCATTCATTCATCGACTC 58.548 43.478 0.00 0.00 0.00 3.36
722 4486 4.452447 GCATTCATTCATTCATCGACTCG 58.548 43.478 0.00 0.00 0.00 4.18
723 4487 4.025396 GCATTCATTCATTCATCGACTCGT 60.025 41.667 0.00 0.00 0.00 4.18
724 4488 5.664262 CATTCATTCATTCATCGACTCGTC 58.336 41.667 0.00 0.00 0.00 4.20
725 4489 3.706698 TCATTCATTCATCGACTCGTCC 58.293 45.455 0.00 0.00 0.00 4.79
726 4490 3.130340 TCATTCATTCATCGACTCGTCCA 59.870 43.478 0.00 0.00 0.00 4.02
727 4491 3.801114 TTCATTCATCGACTCGTCCAT 57.199 42.857 0.00 0.00 0.00 3.41
771 4535 2.045340 GCTACACCGGTGGCCAAT 60.045 61.111 36.47 19.00 44.91 3.16
772 4536 1.222387 GCTACACCGGTGGCCAATA 59.778 57.895 36.47 19.11 44.91 1.90
773 4537 0.179029 GCTACACCGGTGGCCAATAT 60.179 55.000 36.47 17.51 44.91 1.28
774 4538 1.071071 GCTACACCGGTGGCCAATATA 59.929 52.381 36.47 17.70 44.91 0.86
775 4539 2.870435 GCTACACCGGTGGCCAATATAG 60.870 54.545 36.47 25.83 44.91 1.31
776 4540 0.179029 ACACCGGTGGCCAATATAGC 60.179 55.000 36.47 0.00 34.19 2.97
777 4541 0.108585 CACCGGTGGCCAATATAGCT 59.891 55.000 27.57 0.00 0.00 3.32
892 4671 2.029073 AAGTCACACGCACTCCGG 59.971 61.111 0.00 0.00 42.52 5.14
893 4672 4.664677 AGTCACACGCACTCCGGC 62.665 66.667 0.00 0.00 42.52 6.13
915 4698 1.745115 CCGGCAGGCAAAAGATCGA 60.745 57.895 0.00 0.00 0.00 3.59
987 4773 0.249868 TTCTGTGCGTTGGTGGAGAG 60.250 55.000 0.00 0.00 0.00 3.20
988 4774 2.280797 TGTGCGTTGGTGGAGAGC 60.281 61.111 0.00 0.00 0.00 4.09
1049 4839 5.046950 GCTTCTCCTTGTCTTCCTCTTCTTA 60.047 44.000 0.00 0.00 0.00 2.10
1050 4840 6.351796 GCTTCTCCTTGTCTTCCTCTTCTTAT 60.352 42.308 0.00 0.00 0.00 1.73
1095 4885 3.717294 GGAGTGGGGTGCGATGGT 61.717 66.667 0.00 0.00 0.00 3.55
1155 4945 0.099968 CGTCTTCTTCGCCCATCGTA 59.900 55.000 0.00 0.00 39.67 3.43
1270 5060 2.927553 AGCTTGTTCGAATCATTGCC 57.072 45.000 0.00 0.00 0.00 4.52
1281 5071 2.953466 ATCATTGCCTGCATGTTCAC 57.047 45.000 0.00 0.00 0.00 3.18
1376 5200 6.032775 GCACATGTTCATGTTAATCTTGTTCG 59.967 38.462 14.65 2.44 31.37 3.95
1421 5245 4.595781 TCCTAGTTTGTGTTGGACTACCAT 59.404 41.667 0.00 0.00 46.34 3.55
1422 5246 5.781306 TCCTAGTTTGTGTTGGACTACCATA 59.219 40.000 0.00 0.00 46.34 2.74
1430 5255 7.189079 TGTGTTGGACTACCATATATTCACA 57.811 36.000 0.00 0.00 46.34 3.58
1441 5266 7.918536 ACCATATATTCACAGATGCATCTTC 57.081 36.000 26.70 1.35 34.22 2.87
1454 5279 1.796617 GCATCTTCACGCTGAAATGGC 60.797 52.381 15.47 10.17 35.73 4.40
1467 5292 4.738541 GCTGAAATGGCATATCAACAAGGG 60.739 45.833 0.00 0.00 0.00 3.95
1468 5293 3.705579 TGAAATGGCATATCAACAAGGGG 59.294 43.478 0.00 0.00 0.00 4.79
1492 5317 6.912591 GGTTTAGTTTGTGTTTGATCAGACTG 59.087 38.462 16.54 0.00 32.65 3.51
1497 5323 4.291540 TGTGTTTGATCAGACTGTTTGC 57.708 40.909 16.54 2.55 0.00 3.68
1499 5325 2.290367 TGTTTGATCAGACTGTTTGCCG 59.710 45.455 16.54 0.00 0.00 5.69
1824 5656 4.877619 TGCCCGCCGAACCAACAA 62.878 61.111 0.00 0.00 0.00 2.83
1869 5701 2.703409 GCGCCAATGTACAGCTCG 59.297 61.111 0.33 3.62 0.00 5.03
1902 5734 2.562912 GGCAGCACCAACATGTCG 59.437 61.111 0.00 0.00 38.86 4.35
1947 5779 1.509463 GCAGTCGATGTACGTCCCA 59.491 57.895 9.51 0.00 43.13 4.37
1981 5816 3.321648 TGCCTCCATCCGTGCACT 61.322 61.111 16.19 0.00 0.00 4.40
2145 5981 1.284297 CGTTTACACGTCCGGGTTCC 61.284 60.000 0.00 0.00 41.84 3.62
2279 6116 1.220477 GCAAGGTGAGCTCCTCCTC 59.780 63.158 22.26 11.25 37.77 3.71
2283 6120 0.337773 AGGTGAGCTCCTCCTCATCA 59.662 55.000 18.17 0.00 43.78 3.07
2396 6263 2.167900 AGCAGTTTACCTAGGTAAGCCG 59.832 50.000 32.96 27.28 40.90 5.52
2477 6344 6.634805 TGTTGTCCATTGTTGTTGTTACATT 58.365 32.000 0.00 0.00 33.44 2.71
2492 6359 5.917462 TGTTACATTCTGATCGATCATGGT 58.083 37.500 27.43 22.17 36.02 3.55
2641 6508 2.354403 GCCATTGCATTCAAGCTTTCCT 60.354 45.455 0.00 0.00 35.37 3.36
2676 6543 4.028131 CAGGGAATGTGGTGGTACTACTA 58.972 47.826 9.41 0.00 30.28 1.82
2699 6566 0.106519 TAGGGGCCTGGTACGTAGTC 60.107 60.000 0.84 0.00 43.93 2.59
2721 6588 1.843368 ATGGTTCATTCCTGCACCTG 58.157 50.000 0.00 0.00 39.21 4.00
2722 6589 0.895100 TGGTTCATTCCTGCACCTGC 60.895 55.000 0.00 0.00 39.21 4.85
2804 6682 0.413037 TTGATGGATGGGCTGGGTTT 59.587 50.000 0.00 0.00 0.00 3.27
2831 6709 5.475719 TGTCACATGTAGTTAAGCACCTAC 58.524 41.667 0.00 0.00 35.25 3.18
2969 6882 5.745294 GTGATGCAGTGCCAACAATTATTAG 59.255 40.000 13.72 0.00 0.00 1.73
2970 6883 4.717233 TGCAGTGCCAACAATTATTAGG 57.283 40.909 13.72 0.00 0.00 2.69
2971 6884 4.339748 TGCAGTGCCAACAATTATTAGGA 58.660 39.130 13.72 0.00 0.00 2.94
2985 6898 8.253113 ACAATTATTAGGACCATTGCAAAGAAG 58.747 33.333 1.71 0.00 30.96 2.85
2989 6902 3.074412 AGGACCATTGCAAAGAAGTACG 58.926 45.455 1.71 0.00 0.00 3.67
2990 6903 2.812011 GGACCATTGCAAAGAAGTACGT 59.188 45.455 1.71 0.00 0.00 3.57
2991 6904 3.998341 GGACCATTGCAAAGAAGTACGTA 59.002 43.478 1.71 0.00 0.00 3.57
2992 6905 4.142966 GGACCATTGCAAAGAAGTACGTAC 60.143 45.833 18.10 18.10 0.00 3.67
2994 6907 4.451096 ACCATTGCAAAGAAGTACGTACAG 59.549 41.667 26.55 10.38 0.00 2.74
2995 6908 4.688879 CCATTGCAAAGAAGTACGTACAGA 59.311 41.667 26.55 3.07 0.00 3.41
2996 6909 5.351465 CCATTGCAAAGAAGTACGTACAGAT 59.649 40.000 26.55 12.82 0.00 2.90
2997 6910 6.455646 CCATTGCAAAGAAGTACGTACAGATC 60.456 42.308 26.55 19.82 0.00 2.75
2998 6911 5.128992 TGCAAAGAAGTACGTACAGATCA 57.871 39.130 26.55 11.92 0.00 2.92
2999 6912 5.720202 TGCAAAGAAGTACGTACAGATCAT 58.280 37.500 26.55 12.16 0.00 2.45
3000 6913 5.805486 TGCAAAGAAGTACGTACAGATCATC 59.195 40.000 26.55 13.91 0.00 2.92
3001 6914 6.037098 GCAAAGAAGTACGTACAGATCATCT 58.963 40.000 26.55 15.63 0.00 2.90
3002 6915 7.148137 TGCAAAGAAGTACGTACAGATCATCTA 60.148 37.037 26.55 4.32 0.00 1.98
3003 6916 7.166142 GCAAAGAAGTACGTACAGATCATCTAC 59.834 40.741 26.55 8.71 0.00 2.59
3004 6917 8.399425 CAAAGAAGTACGTACAGATCATCTACT 58.601 37.037 26.55 0.69 0.00 2.57
3005 6918 9.610705 AAAGAAGTACGTACAGATCATCTACTA 57.389 33.333 26.55 0.00 0.00 1.82
3006 6919 9.781633 AAGAAGTACGTACAGATCATCTACTAT 57.218 33.333 26.55 0.00 0.00 2.12
3061 7034 9.190317 GAAGGAATACTATGGAAGAAAACCATT 57.810 33.333 0.00 0.00 44.51 3.16
3079 7052 5.856156 ACCATTGCAAAATCTGATGAACAA 58.144 33.333 1.71 0.00 0.00 2.83
3110 7088 7.560368 ACATCACTAGAGACAAAATTCCTAGG 58.440 38.462 0.82 0.82 33.13 3.02
3113 7091 6.954684 TCACTAGAGACAAAATTCCTAGGACT 59.045 38.462 12.22 2.58 33.13 3.85
3118 7096 6.155393 AGAGACAAAATTCCTAGGACTACTGG 59.845 42.308 12.22 2.46 0.00 4.00
3149 7129 3.236816 GTGCACACTTTCACATACATGC 58.763 45.455 13.17 0.00 33.63 4.06
3161 7141 2.754552 ACATACATGCGCATCCAAAAGT 59.245 40.909 22.51 16.62 0.00 2.66
3206 7187 3.306502 CCAAGGCTTACAACTTCCGAGTA 60.307 47.826 0.00 0.00 34.21 2.59
3334 7315 2.035066 CACCCCAAAACTTGCTCTCTTG 59.965 50.000 0.00 0.00 0.00 3.02
3344 7325 3.193267 ACTTGCTCTCTTGTCAGCTCTAG 59.807 47.826 0.00 0.00 36.53 2.43
3345 7326 2.098614 TGCTCTCTTGTCAGCTCTAGG 58.901 52.381 0.00 0.00 36.53 3.02
3346 7327 2.099405 GCTCTCTTGTCAGCTCTAGGT 58.901 52.381 0.00 0.00 32.48 3.08
3347 7328 2.099098 GCTCTCTTGTCAGCTCTAGGTC 59.901 54.545 0.00 0.00 32.48 3.85
3348 7329 2.687935 CTCTCTTGTCAGCTCTAGGTCC 59.312 54.545 0.00 0.00 0.00 4.46
3349 7330 2.310349 TCTCTTGTCAGCTCTAGGTCCT 59.690 50.000 0.00 0.00 0.00 3.85
3350 7331 2.687935 CTCTTGTCAGCTCTAGGTCCTC 59.312 54.545 0.00 0.00 0.00 3.71
3351 7332 2.310349 TCTTGTCAGCTCTAGGTCCTCT 59.690 50.000 0.00 0.00 0.00 3.69
3352 7333 2.909504 TGTCAGCTCTAGGTCCTCTT 57.090 50.000 0.00 0.00 0.00 2.85
3353 7334 3.176924 TGTCAGCTCTAGGTCCTCTTT 57.823 47.619 0.00 0.00 0.00 2.52
3354 7335 2.828520 TGTCAGCTCTAGGTCCTCTTTG 59.171 50.000 0.00 0.00 0.00 2.77
3355 7336 2.167487 GTCAGCTCTAGGTCCTCTTTGG 59.833 54.545 0.00 0.00 37.10 3.28
3356 7337 2.183679 CAGCTCTAGGTCCTCTTTGGT 58.816 52.381 0.00 0.00 37.07 3.67
3357 7338 2.569404 CAGCTCTAGGTCCTCTTTGGTT 59.431 50.000 0.00 0.00 37.07 3.67
3358 7339 2.835156 AGCTCTAGGTCCTCTTTGGTTC 59.165 50.000 0.00 0.00 37.07 3.62
3359 7340 2.093394 GCTCTAGGTCCTCTTTGGTTCC 60.093 54.545 0.00 0.00 37.07 3.62
3360 7341 3.173965 CTCTAGGTCCTCTTTGGTTCCA 58.826 50.000 0.00 0.00 37.07 3.53
3361 7342 3.583086 CTCTAGGTCCTCTTTGGTTCCAA 59.417 47.826 0.00 0.00 37.07 3.53
3362 7343 4.175962 TCTAGGTCCTCTTTGGTTCCAAT 58.824 43.478 5.06 0.00 37.07 3.16
3363 7344 5.347124 TCTAGGTCCTCTTTGGTTCCAATA 58.653 41.667 5.06 0.00 37.07 1.90
3364 7345 5.788533 TCTAGGTCCTCTTTGGTTCCAATAA 59.211 40.000 5.06 0.00 37.07 1.40
3365 7346 4.923415 AGGTCCTCTTTGGTTCCAATAAG 58.077 43.478 5.06 6.05 37.07 1.73
3366 7347 4.354087 AGGTCCTCTTTGGTTCCAATAAGT 59.646 41.667 5.06 0.00 37.07 2.24
3367 7348 4.700692 GGTCCTCTTTGGTTCCAATAAGTC 59.299 45.833 5.06 2.84 37.07 3.01
3368 7349 4.700692 GTCCTCTTTGGTTCCAATAAGTCC 59.299 45.833 5.06 0.00 37.07 3.85
3369 7350 4.017126 CCTCTTTGGTTCCAATAAGTCCC 58.983 47.826 5.06 0.00 0.00 4.46
3370 7351 4.017126 CTCTTTGGTTCCAATAAGTCCCC 58.983 47.826 5.06 0.00 0.00 4.81
3371 7352 3.660669 TCTTTGGTTCCAATAAGTCCCCT 59.339 43.478 5.06 0.00 0.00 4.79
3372 7353 3.449746 TTGGTTCCAATAAGTCCCCTG 57.550 47.619 0.00 0.00 0.00 4.45
3373 7354 2.638325 TGGTTCCAATAAGTCCCCTGA 58.362 47.619 0.00 0.00 0.00 3.86
3374 7355 2.307686 TGGTTCCAATAAGTCCCCTGAC 59.692 50.000 0.00 0.00 42.09 3.51
3402 7383 4.813296 GTCAGGTGACTTAAAACCAGTG 57.187 45.455 2.72 0.00 41.65 3.66
3403 7384 4.448210 GTCAGGTGACTTAAAACCAGTGA 58.552 43.478 2.72 0.00 41.65 3.41
3404 7385 5.063880 GTCAGGTGACTTAAAACCAGTGAT 58.936 41.667 2.72 0.00 41.65 3.06
3405 7386 5.531287 GTCAGGTGACTTAAAACCAGTGATT 59.469 40.000 2.72 0.00 41.65 2.57
3406 7387 6.039382 GTCAGGTGACTTAAAACCAGTGATTT 59.961 38.462 2.72 0.00 41.65 2.17
3407 7388 7.227910 GTCAGGTGACTTAAAACCAGTGATTTA 59.772 37.037 2.72 0.00 41.65 1.40
3408 7389 7.942341 TCAGGTGACTTAAAACCAGTGATTTAT 59.058 33.333 0.00 0.00 40.21 1.40
3409 7390 9.226606 CAGGTGACTTAAAACCAGTGATTTATA 57.773 33.333 0.00 0.00 40.21 0.98
3410 7391 9.802039 AGGTGACTTAAAACCAGTGATTTATAA 57.198 29.630 0.00 0.00 37.44 0.98
3418 7399 7.448748 AAACCAGTGATTTATAAGTCACACC 57.551 36.000 31.03 13.75 45.47 4.16
3419 7400 5.497474 ACCAGTGATTTATAAGTCACACCC 58.503 41.667 31.03 13.47 45.47 4.61
3420 7401 4.570772 CCAGTGATTTATAAGTCACACCCG 59.429 45.833 31.03 20.15 45.47 5.28
3421 7402 5.175859 CAGTGATTTATAAGTCACACCCGT 58.824 41.667 31.03 15.39 45.47 5.28
3422 7403 5.642063 CAGTGATTTATAAGTCACACCCGTT 59.358 40.000 31.03 14.84 45.47 4.44
3423 7404 6.148811 CAGTGATTTATAAGTCACACCCGTTT 59.851 38.462 31.03 14.28 45.47 3.60
3424 7405 6.148811 AGTGATTTATAAGTCACACCCGTTTG 59.851 38.462 31.03 0.00 45.47 2.93
3425 7406 5.413213 TGATTTATAAGTCACACCCGTTTGG 59.587 40.000 6.58 0.00 41.37 3.28
3434 7415 3.439008 CCCGTTTGGTTGTCACCC 58.561 61.111 0.00 0.00 43.49 4.61
3435 7416 2.548295 CCCGTTTGGTTGTCACCCG 61.548 63.158 0.00 0.00 43.49 5.28
3436 7417 1.524165 CCGTTTGGTTGTCACCCGA 60.524 57.895 0.00 0.00 43.49 5.14
3437 7418 1.644913 CGTTTGGTTGTCACCCGAC 59.355 57.895 0.00 0.00 43.49 4.79
3438 7419 0.812412 CGTTTGGTTGTCACCCGACT 60.812 55.000 0.00 0.00 43.49 4.18
3439 7420 1.385528 GTTTGGTTGTCACCCGACTT 58.614 50.000 0.00 0.00 43.49 3.01
3440 7421 2.563702 GTTTGGTTGTCACCCGACTTA 58.436 47.619 0.00 0.00 43.49 2.24
3441 7422 3.143728 GTTTGGTTGTCACCCGACTTAT 58.856 45.455 0.00 0.00 43.49 1.73
3442 7423 4.317488 GTTTGGTTGTCACCCGACTTATA 58.683 43.478 0.00 0.00 43.49 0.98
3443 7424 4.620589 TTGGTTGTCACCCGACTTATAA 57.379 40.909 0.00 0.00 43.49 0.98
3444 7425 4.196626 TGGTTGTCACCCGACTTATAAG 57.803 45.455 11.05 11.05 43.49 1.73
3445 7426 3.579586 TGGTTGTCACCCGACTTATAAGT 59.420 43.478 18.05 18.05 43.49 2.24
3446 7427 4.040706 TGGTTGTCACCCGACTTATAAGTT 59.959 41.667 18.96 0.63 43.49 2.66
3447 7428 5.245751 TGGTTGTCACCCGACTTATAAGTTA 59.754 40.000 18.96 0.00 43.49 2.24
3448 7429 6.070653 TGGTTGTCACCCGACTTATAAGTTAT 60.071 38.462 18.96 0.17 43.49 1.89
3449 7430 6.478016 GGTTGTCACCCGACTTATAAGTTATC 59.522 42.308 18.96 6.20 43.06 1.75
3450 7431 7.263496 GTTGTCACCCGACTTATAAGTTATCT 58.737 38.462 18.96 0.00 43.06 1.98
3451 7432 7.414222 TGTCACCCGACTTATAAGTTATCTT 57.586 36.000 18.96 1.41 43.06 2.40
3452 7433 7.486647 TGTCACCCGACTTATAAGTTATCTTC 58.513 38.462 18.96 4.82 43.06 2.87
3453 7434 6.922407 GTCACCCGACTTATAAGTTATCTTCC 59.078 42.308 18.96 4.14 39.88 3.46
3454 7435 6.041296 TCACCCGACTTATAAGTTATCTTCCC 59.959 42.308 18.96 3.46 39.88 3.97
3455 7436 5.901276 ACCCGACTTATAAGTTATCTTCCCA 59.099 40.000 18.96 0.00 39.88 4.37
3456 7437 6.183360 ACCCGACTTATAAGTTATCTTCCCAC 60.183 42.308 18.96 2.11 39.88 4.61
3457 7438 6.183360 CCCGACTTATAAGTTATCTTCCCACA 60.183 42.308 18.96 0.00 39.88 4.17
3458 7439 6.700520 CCGACTTATAAGTTATCTTCCCACAC 59.299 42.308 18.96 1.44 39.88 3.82
3459 7440 6.700520 CGACTTATAAGTTATCTTCCCACACC 59.299 42.308 18.96 1.04 39.88 4.16
3460 7441 7.417570 CGACTTATAAGTTATCTTCCCACACCT 60.418 40.741 18.96 0.00 39.88 4.00
3461 7442 8.159229 ACTTATAAGTTATCTTCCCACACCTT 57.841 34.615 12.50 0.00 35.21 3.50
3462 7443 8.265764 ACTTATAAGTTATCTTCCCACACCTTC 58.734 37.037 12.50 0.00 35.21 3.46
3463 7444 4.302559 AAGTTATCTTCCCACACCTTCC 57.697 45.455 0.00 0.00 0.00 3.46
3464 7445 2.576648 AGTTATCTTCCCACACCTTCCC 59.423 50.000 0.00 0.00 0.00 3.97
3465 7446 2.307686 GTTATCTTCCCACACCTTCCCA 59.692 50.000 0.00 0.00 0.00 4.37
3466 7447 0.698818 ATCTTCCCACACCTTCCCAC 59.301 55.000 0.00 0.00 0.00 4.61
3467 7448 0.696143 TCTTCCCACACCTTCCCACA 60.696 55.000 0.00 0.00 0.00 4.17
3468 7449 0.537371 CTTCCCACACCTTCCCACAC 60.537 60.000 0.00 0.00 0.00 3.82
3469 7450 2.002018 TTCCCACACCTTCCCACACC 62.002 60.000 0.00 0.00 0.00 4.16
3470 7451 2.762554 CCCACACCTTCCCACACCA 61.763 63.158 0.00 0.00 0.00 4.17
3471 7452 1.228793 CCACACCTTCCCACACCAA 59.771 57.895 0.00 0.00 0.00 3.67
3472 7453 0.178964 CCACACCTTCCCACACCAAT 60.179 55.000 0.00 0.00 0.00 3.16
3473 7454 1.247567 CACACCTTCCCACACCAATC 58.752 55.000 0.00 0.00 0.00 2.67
3474 7455 0.850100 ACACCTTCCCACACCAATCA 59.150 50.000 0.00 0.00 0.00 2.57
3475 7456 1.216678 ACACCTTCCCACACCAATCAA 59.783 47.619 0.00 0.00 0.00 2.57
3476 7457 1.613437 CACCTTCCCACACCAATCAAC 59.387 52.381 0.00 0.00 0.00 3.18
3477 7458 1.216678 ACCTTCCCACACCAATCAACA 59.783 47.619 0.00 0.00 0.00 3.33
3478 7459 2.158325 ACCTTCCCACACCAATCAACAT 60.158 45.455 0.00 0.00 0.00 2.71
3479 7460 2.493278 CCTTCCCACACCAATCAACATC 59.507 50.000 0.00 0.00 0.00 3.06
3480 7461 2.967745 TCCCACACCAATCAACATCA 57.032 45.000 0.00 0.00 0.00 3.07
3481 7462 3.454719 TCCCACACCAATCAACATCAT 57.545 42.857 0.00 0.00 0.00 2.45
3482 7463 3.090790 TCCCACACCAATCAACATCATG 58.909 45.455 0.00 0.00 0.00 3.07
3483 7464 2.417651 CCCACACCAATCAACATCATGC 60.418 50.000 0.00 0.00 0.00 4.06
3484 7465 2.231721 CCACACCAATCAACATCATGCA 59.768 45.455 0.00 0.00 0.00 3.96
3485 7466 3.507786 CACACCAATCAACATCATGCAG 58.492 45.455 0.00 0.00 0.00 4.41
3486 7467 2.494471 ACACCAATCAACATCATGCAGG 59.506 45.455 0.00 0.00 0.00 4.85
3487 7468 2.494471 CACCAATCAACATCATGCAGGT 59.506 45.455 0.00 0.00 0.00 4.00
3488 7469 2.494471 ACCAATCAACATCATGCAGGTG 59.506 45.455 0.00 0.00 0.00 4.00
3489 7470 2.159156 CCAATCAACATCATGCAGGTGG 60.159 50.000 0.00 0.00 0.00 4.61
3490 7471 2.494471 CAATCAACATCATGCAGGTGGT 59.506 45.455 0.00 0.00 0.00 4.16
3491 7472 1.536940 TCAACATCATGCAGGTGGTG 58.463 50.000 11.19 11.19 36.30 4.17
3492 7473 0.528924 CAACATCATGCAGGTGGTGG 59.471 55.000 5.59 0.00 34.50 4.61
3493 7474 0.612732 AACATCATGCAGGTGGTGGG 60.613 55.000 5.59 0.00 34.50 4.61
3494 7475 1.303948 CATCATGCAGGTGGTGGGA 59.696 57.895 0.00 0.00 0.00 4.37
3495 7476 1.033746 CATCATGCAGGTGGTGGGAC 61.034 60.000 0.00 0.00 0.00 4.46
3496 7477 2.215451 ATCATGCAGGTGGTGGGACC 62.215 60.000 0.00 0.00 39.22 4.46
3497 7478 3.661648 ATGCAGGTGGTGGGACCC 61.662 66.667 2.45 2.45 37.50 4.46
3499 7480 3.661648 GCAGGTGGTGGGACCCAT 61.662 66.667 18.51 0.00 37.50 4.00
3500 7481 2.356278 CAGGTGGTGGGACCCATG 59.644 66.667 18.51 6.58 37.50 3.66
3501 7482 3.661648 AGGTGGTGGGACCCATGC 61.662 66.667 18.51 9.82 37.50 4.06
3502 7483 3.978193 GGTGGTGGGACCCATGCA 61.978 66.667 18.51 0.00 37.50 3.96
3503 7484 2.117206 GTGGTGGGACCCATGCAA 59.883 61.111 18.51 0.00 37.50 4.08
3504 7485 1.532794 GTGGTGGGACCCATGCAAA 60.533 57.895 18.51 0.00 37.50 3.68
3505 7486 1.118356 GTGGTGGGACCCATGCAAAA 61.118 55.000 18.51 0.00 37.50 2.44
3506 7487 0.831288 TGGTGGGACCCATGCAAAAG 60.831 55.000 18.51 0.00 37.50 2.27
3507 7488 1.543944 GGTGGGACCCATGCAAAAGG 61.544 60.000 18.51 0.00 35.28 3.11
3512 7493 3.391098 CCCATGCAAAAGGGGGTG 58.609 61.111 13.05 0.00 46.96 4.61
3513 7494 1.229145 CCCATGCAAAAGGGGGTGA 60.229 57.895 13.05 0.00 46.96 4.02
3514 7495 1.543944 CCCATGCAAAAGGGGGTGAC 61.544 60.000 13.05 0.00 46.96 3.67
3515 7496 0.542702 CCATGCAAAAGGGGGTGACT 60.543 55.000 0.00 0.00 0.00 3.41
3516 7497 1.341080 CATGCAAAAGGGGGTGACTT 58.659 50.000 0.00 0.00 0.00 3.01
3517 7498 2.524306 CATGCAAAAGGGGGTGACTTA 58.476 47.619 0.00 0.00 0.00 2.24
3518 7499 2.990740 TGCAAAAGGGGGTGACTTAT 57.009 45.000 0.00 0.00 0.00 1.73
3519 7500 4.277476 CATGCAAAAGGGGGTGACTTATA 58.723 43.478 0.00 0.00 0.00 0.98
3520 7501 3.692690 TGCAAAAGGGGGTGACTTATAC 58.307 45.455 0.00 0.00 0.00 1.47
3521 7502 2.681344 GCAAAAGGGGGTGACTTATACG 59.319 50.000 0.00 0.00 0.00 3.06
3522 7503 3.871074 GCAAAAGGGGGTGACTTATACGT 60.871 47.826 0.00 0.00 0.00 3.57
3523 7504 4.329392 CAAAAGGGGGTGACTTATACGTT 58.671 43.478 0.00 0.00 0.00 3.99
3524 7505 4.645863 AAAGGGGGTGACTTATACGTTT 57.354 40.909 0.00 0.00 0.00 3.60
3525 7506 4.645863 AAGGGGGTGACTTATACGTTTT 57.354 40.909 0.00 0.00 0.00 2.43
3526 7507 5.760484 AAGGGGGTGACTTATACGTTTTA 57.240 39.130 0.00 0.00 0.00 1.52
3527 7508 5.760484 AGGGGGTGACTTATACGTTTTAA 57.240 39.130 0.00 0.00 0.00 1.52
3528 7509 5.737860 AGGGGGTGACTTATACGTTTTAAG 58.262 41.667 13.46 13.46 33.73 1.85
3529 7510 5.249163 AGGGGGTGACTTATACGTTTTAAGT 59.751 40.000 18.24 18.24 41.41 2.24
3530 7511 5.939883 GGGGGTGACTTATACGTTTTAAGTT 59.060 40.000 18.86 8.11 39.40 2.66
3531 7512 6.128200 GGGGGTGACTTATACGTTTTAAGTTG 60.128 42.308 18.86 1.57 39.40 3.16
3532 7513 6.128200 GGGGTGACTTATACGTTTTAAGTTGG 60.128 42.308 18.86 1.31 39.40 3.77
3533 7514 6.128200 GGGTGACTTATACGTTTTAAGTTGGG 60.128 42.308 18.86 1.03 39.40 4.12
3534 7515 6.128200 GGTGACTTATACGTTTTAAGTTGGGG 60.128 42.308 18.86 0.50 39.40 4.96
3535 7516 6.427853 GTGACTTATACGTTTTAAGTTGGGGT 59.572 38.462 18.86 2.97 39.40 4.95
3536 7517 6.427547 TGACTTATACGTTTTAAGTTGGGGTG 59.572 38.462 18.86 0.00 39.40 4.61
3537 7518 5.706833 ACTTATACGTTTTAAGTTGGGGTGG 59.293 40.000 14.46 0.00 36.70 4.61
3538 7519 2.732844 ACGTTTTAAGTTGGGGTGGA 57.267 45.000 0.00 0.00 0.00 4.02
3539 7520 2.578786 ACGTTTTAAGTTGGGGTGGAG 58.421 47.619 0.00 0.00 0.00 3.86
3540 7521 1.268625 CGTTTTAAGTTGGGGTGGAGC 59.731 52.381 0.00 0.00 0.00 4.70
3541 7522 2.312390 GTTTTAAGTTGGGGTGGAGCA 58.688 47.619 0.00 0.00 0.00 4.26
3542 7523 2.696187 GTTTTAAGTTGGGGTGGAGCAA 59.304 45.455 0.00 0.00 0.00 3.91
3543 7524 1.989706 TTAAGTTGGGGTGGAGCAAC 58.010 50.000 0.00 0.00 0.00 4.17
3544 7525 1.145571 TAAGTTGGGGTGGAGCAACT 58.854 50.000 0.00 0.00 39.27 3.16
3545 7526 0.261696 AAGTTGGGGTGGAGCAACTT 59.738 50.000 0.00 0.00 41.36 2.66
3546 7527 1.145571 AGTTGGGGTGGAGCAACTTA 58.854 50.000 0.00 0.00 34.63 2.24
3547 7528 1.710809 AGTTGGGGTGGAGCAACTTAT 59.289 47.619 0.00 0.00 34.63 1.73
3548 7529 1.818674 GTTGGGGTGGAGCAACTTATG 59.181 52.381 0.00 0.00 0.00 1.90
3549 7530 1.367346 TGGGGTGGAGCAACTTATGA 58.633 50.000 0.00 0.00 0.00 2.15
3550 7531 1.004277 TGGGGTGGAGCAACTTATGAC 59.996 52.381 0.00 0.00 0.00 3.06
3551 7532 1.282157 GGGGTGGAGCAACTTATGACT 59.718 52.381 0.00 0.00 0.00 3.41
3552 7533 2.290960 GGGGTGGAGCAACTTATGACTT 60.291 50.000 0.00 0.00 0.00 3.01
3553 7534 3.054655 GGGGTGGAGCAACTTATGACTTA 60.055 47.826 0.00 0.00 0.00 2.24
3554 7535 4.385310 GGGGTGGAGCAACTTATGACTTAT 60.385 45.833 0.00 0.00 0.00 1.73
3555 7536 5.163237 GGGGTGGAGCAACTTATGACTTATA 60.163 44.000 0.00 0.00 0.00 0.98
3556 7537 6.354130 GGGTGGAGCAACTTATGACTTATAA 58.646 40.000 0.00 0.00 0.00 0.98
3569 7550 9.838339 CTTATGACTTATAAGTTGGGATGACTT 57.162 33.333 18.96 5.26 42.11 3.01
3578 7559 8.980481 ATAAGTTGGGATGACTTATAAGTTGG 57.020 34.615 18.96 0.00 44.36 3.77
3579 7560 5.755849 AGTTGGGATGACTTATAAGTTGGG 58.244 41.667 18.96 0.00 39.88 4.12
3580 7561 4.788925 TGGGATGACTTATAAGTTGGGG 57.211 45.455 18.96 0.00 39.88 4.96
3581 7562 3.117663 TGGGATGACTTATAAGTTGGGGC 60.118 47.826 18.96 6.91 39.88 5.80
3582 7563 3.138468 GGGATGACTTATAAGTTGGGGCT 59.862 47.826 18.96 1.73 39.88 5.19
3583 7564 4.137543 GGATGACTTATAAGTTGGGGCTG 58.862 47.826 18.96 0.00 39.88 4.85
3584 7565 4.385310 GGATGACTTATAAGTTGGGGCTGT 60.385 45.833 18.96 0.67 39.88 4.40
3585 7566 4.650972 TGACTTATAAGTTGGGGCTGTT 57.349 40.909 18.96 0.00 39.88 3.16
3586 7567 4.993028 TGACTTATAAGTTGGGGCTGTTT 58.007 39.130 18.96 0.00 39.88 2.83
3587 7568 4.764823 TGACTTATAAGTTGGGGCTGTTTG 59.235 41.667 18.96 0.00 39.88 2.93
3588 7569 4.086457 ACTTATAAGTTGGGGCTGTTTGG 58.914 43.478 12.50 0.00 35.21 3.28
3589 7570 1.266178 ATAAGTTGGGGCTGTTTGGC 58.734 50.000 0.00 0.00 40.96 4.52
3590 7571 0.105964 TAAGTTGGGGCTGTTTGGCA 60.106 50.000 0.00 0.00 43.83 4.92
3591 7572 0.980231 AAGTTGGGGCTGTTTGGCAA 60.980 50.000 0.00 0.00 43.83 4.52
3592 7573 0.980231 AGTTGGGGCTGTTTGGCAAA 60.980 50.000 8.93 8.93 43.83 3.68
3593 7574 0.107459 GTTGGGGCTGTTTGGCAAAA 60.107 50.000 15.29 4.59 43.83 2.44
3594 7575 0.842635 TTGGGGCTGTTTGGCAAAAT 59.157 45.000 15.29 0.00 43.83 1.82
3595 7576 1.722034 TGGGGCTGTTTGGCAAAATA 58.278 45.000 15.29 6.13 43.83 1.40
3596 7577 2.050144 TGGGGCTGTTTGGCAAAATAA 58.950 42.857 15.29 2.73 43.83 1.40
3597 7578 2.038295 TGGGGCTGTTTGGCAAAATAAG 59.962 45.455 15.29 13.27 43.83 1.73
3598 7579 2.038426 GGGGCTGTTTGGCAAAATAAGT 59.962 45.455 15.29 0.00 43.83 2.24
3599 7580 3.325870 GGGCTGTTTGGCAAAATAAGTC 58.674 45.455 15.29 13.46 43.83 3.01
3600 7581 3.244044 GGGCTGTTTGGCAAAATAAGTCA 60.244 43.478 15.29 6.39 43.83 3.41
3601 7582 3.740832 GGCTGTTTGGCAAAATAAGTCAC 59.259 43.478 15.29 0.53 41.37 3.67
3602 7583 4.501400 GGCTGTTTGGCAAAATAAGTCACT 60.501 41.667 15.29 0.00 41.37 3.41
3603 7584 5.049828 GCTGTTTGGCAAAATAAGTCACTT 58.950 37.500 15.29 0.00 0.00 3.16
3604 7585 5.523552 GCTGTTTGGCAAAATAAGTCACTTT 59.476 36.000 15.29 0.00 0.00 2.66
3605 7586 6.037062 GCTGTTTGGCAAAATAAGTCACTTTT 59.963 34.615 15.29 0.00 0.00 2.27
3606 7587 7.413988 GCTGTTTGGCAAAATAAGTCACTTTTT 60.414 33.333 15.29 0.00 0.00 1.94
3607 7588 7.746929 TGTTTGGCAAAATAAGTCACTTTTTG 58.253 30.769 15.29 9.51 41.19 2.44
3618 7599 9.986833 AATAAGTCACTTTTTGCAATTTTTGAC 57.013 25.926 17.59 17.59 33.76 3.18
3619 7600 7.671495 AAGTCACTTTTTGCAATTTTTGACT 57.329 28.000 20.32 20.32 43.26 3.41
3620 7601 7.671495 AGTCACTTTTTGCAATTTTTGACTT 57.329 28.000 20.32 10.60 39.48 3.01
3621 7602 8.770438 AGTCACTTTTTGCAATTTTTGACTTA 57.230 26.923 20.32 0.00 39.48 2.24
3622 7603 9.382275 AGTCACTTTTTGCAATTTTTGACTTAT 57.618 25.926 20.32 7.08 39.48 1.73
3630 7611 9.606631 TTTGCAATTTTTGACTTATAAGTTGGT 57.393 25.926 18.96 0.00 39.88 3.67
3631 7612 8.586570 TGCAATTTTTGACTTATAAGTTGGTG 57.413 30.769 18.96 11.22 39.88 4.17
3632 7613 8.417106 TGCAATTTTTGACTTATAAGTTGGTGA 58.583 29.630 18.96 6.93 39.88 4.02
3633 7614 9.423061 GCAATTTTTGACTTATAAGTTGGTGAT 57.577 29.630 18.96 8.72 39.88 3.06
3649 7630 8.831715 AGTTGGTGATTTATTTGGAATCAAAC 57.168 30.769 1.51 4.39 44.53 2.93
3650 7631 8.428063 AGTTGGTGATTTATTTGGAATCAAACA 58.572 29.630 12.88 8.30 44.53 2.83
3651 7632 8.711457 GTTGGTGATTTATTTGGAATCAAACAG 58.289 33.333 1.51 0.00 44.53 3.16
3652 7633 7.385267 TGGTGATTTATTTGGAATCAAACAGG 58.615 34.615 1.51 0.00 44.53 4.00
3653 7634 6.818142 GGTGATTTATTTGGAATCAAACAGGG 59.182 38.462 1.51 0.00 44.53 4.45
3654 7635 6.313658 GTGATTTATTTGGAATCAAACAGGGC 59.686 38.462 1.51 0.00 44.53 5.19
3655 7636 4.817318 TTATTTGGAATCAAACAGGGCC 57.183 40.909 0.00 0.00 44.53 5.80
3661 7642 2.369394 GAATCAAACAGGGCCCTAGTG 58.631 52.381 28.13 22.13 0.00 2.74
3677 7658 3.562141 CCTAGTGTAGTCCATCTCACTCG 59.438 52.174 0.00 0.00 40.77 4.18
3693 7674 1.135046 CTCGCAGTCACAAGTCACAG 58.865 55.000 0.00 0.00 0.00 3.66
3849 7830 0.474854 TGGCAGGGAACAAGGACCTA 60.475 55.000 0.00 0.00 32.22 3.08
3855 7836 3.134804 CAGGGAACAAGGACCTATACCTG 59.865 52.174 15.34 15.34 37.85 4.00
3858 7839 3.381335 GAACAAGGACCTATACCTGGGA 58.619 50.000 0.00 0.00 37.85 4.37
3938 7924 1.156736 CAAGCCTTAACAGTCACCCG 58.843 55.000 0.00 0.00 0.00 5.28
3968 7954 9.760660 GTTGCTAATCTAACTGTAATCTTGTTG 57.239 33.333 0.00 0.00 0.00 3.33
4536 8572 0.179034 GCTAGCTAGGGCAACATGCT 60.179 55.000 22.10 0.00 44.28 3.79
4578 8614 2.092968 AGGACCGATGATAAAGCTTGCA 60.093 45.455 0.00 0.00 0.00 4.08
4607 8643 2.264794 GTTGTGATCGGCCGACCT 59.735 61.111 33.75 17.22 0.00 3.85
4623 8659 2.490148 CCTCTGCGATGCGAGGGTA 61.490 63.158 16.59 0.00 41.72 3.69
4627 8663 3.537874 GCGATGCGAGGGTAGGGT 61.538 66.667 0.00 0.00 0.00 4.34
4628 8664 2.417516 CGATGCGAGGGTAGGGTG 59.582 66.667 0.00 0.00 0.00 4.61
4629 8665 2.423898 CGATGCGAGGGTAGGGTGT 61.424 63.158 0.00 0.00 0.00 4.16
4630 8666 1.144057 GATGCGAGGGTAGGGTGTG 59.856 63.158 0.00 0.00 0.00 3.82
4631 8667 2.925162 GATGCGAGGGTAGGGTGTGC 62.925 65.000 0.00 0.00 0.00 4.57
4632 8668 4.814294 GCGAGGGTAGGGTGTGCG 62.814 72.222 0.00 0.00 0.00 5.34
4633 8669 3.066190 CGAGGGTAGGGTGTGCGA 61.066 66.667 0.00 0.00 0.00 5.10
4634 8670 2.423898 CGAGGGTAGGGTGTGCGAT 61.424 63.158 0.00 0.00 0.00 4.58
4671 8708 0.039527 GGTTGGCGCCTTAACTTGTG 60.040 55.000 29.70 0.00 0.00 3.33
4814 8858 3.133003 CCATGTACTACTGAACCTGGGAG 59.867 52.174 0.00 0.00 30.34 4.30
4844 8888 0.458025 GCCTACGGTGCTGTGTAGAC 60.458 60.000 10.19 0.00 40.36 2.59
4855 8899 0.826256 TGTGTAGACAGAGCGGTGGT 60.826 55.000 0.00 0.00 0.00 4.16
4913 8966 0.523966 AAGAGACGACGCAAGGAGAG 59.476 55.000 0.00 0.00 46.39 3.20
4966 9021 3.167945 GTCGTAACCCGTGACGCG 61.168 66.667 3.53 3.53 38.93 6.01
4995 9050 3.195698 GAGAACCCGATGCGGCAC 61.196 66.667 4.03 0.00 46.86 5.01
5084 9143 3.426323 GCGGCTGTGCTTTTATACTTTC 58.574 45.455 0.00 0.00 0.00 2.62
5131 9190 1.787155 CTCGTCCAACTCACAGAAACG 59.213 52.381 0.00 0.00 0.00 3.60
5136 9195 2.251642 AACTCACAGAAACGCCGGC 61.252 57.895 19.07 19.07 0.00 6.13
5153 9212 1.508088 GCCCGGTGAGCAAAATCTG 59.492 57.895 0.00 0.00 0.00 2.90
5185 9244 1.831652 CTTCTTGTCCTGTCCCGCCT 61.832 60.000 0.00 0.00 0.00 5.52
5211 9285 2.403987 CGGCCTGTAGACGACGAG 59.596 66.667 0.00 0.00 0.00 4.18
5214 9288 1.748122 GCCTGTAGACGACGAGGGA 60.748 63.158 0.00 0.00 30.92 4.20
5281 9632 0.839946 CTCAGGAATTGACCGGGGAT 59.160 55.000 6.32 0.00 34.73 3.85
5345 9698 2.186384 GCAGCCAGCGTCATCTCT 59.814 61.111 0.00 0.00 0.00 3.10
5346 9699 1.882167 GCAGCCAGCGTCATCTCTC 60.882 63.158 0.00 0.00 0.00 3.20
5347 9700 1.514553 CAGCCAGCGTCATCTCTCA 59.485 57.895 0.00 0.00 0.00 3.27
5348 9701 0.528033 CAGCCAGCGTCATCTCTCAG 60.528 60.000 0.00 0.00 0.00 3.35
5386 9739 5.452077 GGACAGAAATATACTCGCAGGACTT 60.452 44.000 0.00 0.00 0.00 3.01
5389 9742 6.979238 ACAGAAATATACTCGCAGGACTTTAC 59.021 38.462 0.00 0.00 0.00 2.01
5391 9744 7.707035 CAGAAATATACTCGCAGGACTTTACTT 59.293 37.037 0.00 0.00 0.00 2.24
5393 9746 2.349297 ACTCGCAGGACTTTACTTCG 57.651 50.000 0.00 0.00 0.00 3.79
5417 9770 4.006319 GGACAAGATTCTTTCCTGGACTG 58.994 47.826 15.00 0.00 0.00 3.51
5418 9771 3.416156 ACAAGATTCTTTCCTGGACTGC 58.584 45.455 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.782244 CAGCGCTCACGTGAAGCC 61.782 66.667 30.10 21.68 42.83 4.35
208 226 1.202486 GCTTAACCACCCATCGATCGA 60.202 52.381 21.86 21.86 0.00 3.59
344 380 2.426522 CCGAAGTCCAAGATCAAGCAA 58.573 47.619 0.00 0.00 0.00 3.91
363 399 2.032071 CAGGTGGTTCGGTGACCC 59.968 66.667 0.00 0.00 39.01 4.46
459 495 4.561938 GGGGTTGGTTATTTTAGTGTTGGC 60.562 45.833 0.00 0.00 0.00 4.52
475 511 1.409427 GAGTGAGAGTATCGGGGTTGG 59.591 57.143 0.00 0.00 42.67 3.77
476 512 2.100197 TGAGTGAGAGTATCGGGGTTG 58.900 52.381 0.00 0.00 42.67 3.77
482 4212 7.195839 TGAGTGAATATGAGTGAGAGTATCG 57.804 40.000 0.00 0.00 42.67 2.92
483 4213 9.624697 GAATGAGTGAATATGAGTGAGAGTATC 57.375 37.037 0.00 0.00 0.00 2.24
622 4360 3.308705 GCTGGGCTGGCTTTGCTT 61.309 61.111 0.00 0.00 0.00 3.91
626 4364 2.122901 TTTGGCTGGGCTGGCTTT 60.123 55.556 0.00 0.00 0.00 3.51
696 4460 3.627123 TCGATGAATGAATGAATGCGGTT 59.373 39.130 0.00 0.00 0.00 4.44
712 4476 2.479275 GTCGATATGGACGAGTCGATGA 59.521 50.000 21.50 1.84 43.81 2.92
713 4477 2.412977 GGTCGATATGGACGAGTCGATG 60.413 54.545 21.50 0.00 43.81 3.84
714 4478 1.805345 GGTCGATATGGACGAGTCGAT 59.195 52.381 21.50 4.89 43.81 3.59
715 4479 1.224075 GGTCGATATGGACGAGTCGA 58.776 55.000 21.50 0.00 40.37 4.20
716 4480 0.110778 CGGTCGATATGGACGAGTCG 60.111 60.000 11.85 11.85 40.37 4.18
717 4481 1.224075 TCGGTCGATATGGACGAGTC 58.776 55.000 11.21 0.00 40.37 3.36
718 4482 1.805345 GATCGGTCGATATGGACGAGT 59.195 52.381 11.21 0.45 40.37 4.18
719 4483 1.804748 TGATCGGTCGATATGGACGAG 59.195 52.381 11.21 8.31 40.37 4.18
720 4484 1.886886 TGATCGGTCGATATGGACGA 58.113 50.000 11.21 11.75 37.82 4.20
721 4485 2.921634 ATGATCGGTCGATATGGACG 57.078 50.000 11.21 7.38 37.82 4.79
722 4486 3.056821 TGGAATGATCGGTCGATATGGAC 60.057 47.826 9.23 9.23 34.60 4.02
723 4487 3.056821 GTGGAATGATCGGTCGATATGGA 60.057 47.826 5.81 0.00 34.60 3.41
724 4488 3.254060 GTGGAATGATCGGTCGATATGG 58.746 50.000 5.81 0.00 34.60 2.74
725 4489 3.254060 GGTGGAATGATCGGTCGATATG 58.746 50.000 5.81 0.00 34.60 1.78
726 4490 2.897326 TGGTGGAATGATCGGTCGATAT 59.103 45.455 5.81 0.00 34.60 1.63
727 4491 2.035449 GTGGTGGAATGATCGGTCGATA 59.965 50.000 5.81 0.00 34.60 2.92
776 4540 3.272439 TGACGTTTATATACGCGGGAG 57.728 47.619 12.47 0.00 45.06 4.30
777 4541 3.706802 TTGACGTTTATATACGCGGGA 57.293 42.857 12.47 0.00 45.06 5.14
902 4681 2.777832 AAGAGCTCGATCTTTTGCCT 57.222 45.000 8.37 0.00 36.05 4.75
915 4698 3.142174 CGAAAGAGGAACCAAAAGAGCT 58.858 45.455 0.00 0.00 0.00 4.09
987 4773 0.689080 TGTCCATCTCCTCCTCCAGC 60.689 60.000 0.00 0.00 0.00 4.85
988 4774 1.693062 CATGTCCATCTCCTCCTCCAG 59.307 57.143 0.00 0.00 0.00 3.86
1095 4885 2.425592 CAAGAGCCACCGTCACCA 59.574 61.111 0.00 0.00 0.00 4.17
1138 4928 0.744874 CCTACGATGGGCGAAGAAGA 59.255 55.000 0.00 0.00 44.57 2.87
1187 4977 4.849329 CTCGGCCGTCGTACTGCC 62.849 72.222 27.15 9.34 43.87 4.85
1219 5009 1.202639 TCCTGAACTCGTGTTGCATGT 60.203 47.619 7.72 0.00 36.39 3.21
1298 5090 8.998277 ACTTGGACACTAGTACTATGATACAT 57.002 34.615 2.33 0.00 30.85 2.29
1303 5095 8.327271 AGTTAGACTTGGACACTAGTACTATGA 58.673 37.037 2.33 0.00 32.81 2.15
1309 5101 7.941238 AGTGTTAGTTAGACTTGGACACTAGTA 59.059 37.037 16.12 0.00 40.48 1.82
1310 5102 6.776603 AGTGTTAGTTAGACTTGGACACTAGT 59.223 38.462 16.12 0.00 40.48 2.57
1311 5103 7.216973 AGTGTTAGTTAGACTTGGACACTAG 57.783 40.000 16.12 0.00 40.48 2.57
1421 5245 5.406477 GCGTGAAGATGCATCTGTGAATATA 59.594 40.000 29.34 7.52 37.19 0.86
1422 5246 4.212847 GCGTGAAGATGCATCTGTGAATAT 59.787 41.667 29.34 12.22 37.19 1.28
1430 5255 2.391616 TTCAGCGTGAAGATGCATCT 57.608 45.000 23.75 23.75 39.22 2.90
1441 5266 3.181498 TGTTGATATGCCATTTCAGCGTG 60.181 43.478 7.30 0.00 0.00 5.34
1454 5279 7.090173 CACAAACTAAACCCCTTGTTGATATG 58.910 38.462 0.00 0.00 37.23 1.78
1467 5292 6.912591 CAGTCTGATCAAACACAAACTAAACC 59.087 38.462 1.27 0.00 0.00 3.27
1468 5293 7.472543 ACAGTCTGATCAAACACAAACTAAAC 58.527 34.615 6.91 0.00 0.00 2.01
1492 5317 5.159399 TCTGTACAAAAGTTACGGCAAAC 57.841 39.130 0.00 0.00 0.00 2.93
1497 5323 5.121768 CCTCCAATCTGTACAAAAGTTACGG 59.878 44.000 0.00 0.00 0.00 4.02
1499 5325 5.472137 TGCCTCCAATCTGTACAAAAGTTAC 59.528 40.000 0.00 0.00 0.00 2.50
1624 5453 0.685097 TGGTGGTGGTACTTGAGCTC 59.315 55.000 6.82 6.82 0.00 4.09
1662 5491 0.828343 AGTAGGGCGAGCCTGGATAC 60.828 60.000 14.33 11.39 36.10 2.24
1902 5734 2.485124 CCAGGACTTGATGCCAGAGATC 60.485 54.545 0.00 0.00 0.00 2.75
2279 6116 6.075762 TGTTTTGTGGTTCTTGATCTGATG 57.924 37.500 0.00 0.00 0.00 3.07
2283 6120 7.205297 CAGAAATGTTTTGTGGTTCTTGATCT 58.795 34.615 0.00 0.00 0.00 2.75
2396 6263 5.795972 AGAAGTTAAGGAAGGAGTAGCAAC 58.204 41.667 0.00 0.00 0.00 4.17
2404 6271 3.583086 CCACTGGAGAAGTTAAGGAAGGA 59.417 47.826 0.00 0.00 36.83 3.36
2407 6274 5.382664 AAACCACTGGAGAAGTTAAGGAA 57.617 39.130 0.71 0.00 36.83 3.36
2455 6322 6.977502 CAGAATGTAACAACAACAATGGACAA 59.022 34.615 0.00 0.00 0.00 3.18
2492 6359 5.147032 ACCCACCTTCAAATTTCAGATCAA 58.853 37.500 0.00 0.00 0.00 2.57
2641 6508 5.200483 CACATTCCCTGGGCTTAATTAAGA 58.800 41.667 26.00 7.09 35.33 2.10
2676 6543 1.684734 CGTACCAGGCCCCTACACT 60.685 63.158 0.00 0.00 0.00 3.55
2699 6566 2.092212 AGGTGCAGGAATGAACCATAGG 60.092 50.000 8.11 0.00 40.05 2.57
2721 6588 1.590238 CAGCAGCGAGTTACAGTATGC 59.410 52.381 0.00 0.00 42.53 3.14
2722 6589 3.150848 TCAGCAGCGAGTTACAGTATG 57.849 47.619 0.00 0.00 46.00 2.39
2804 6682 5.008217 GGTGCTTAACTACATGTGACAACAA 59.992 40.000 9.11 0.00 40.46 2.83
2831 6709 0.395036 TCTCCTCCAGCTCCTTCTCG 60.395 60.000 0.00 0.00 0.00 4.04
2919 6820 2.419574 GGTGCGGCAGTAATAAAGAGGA 60.420 50.000 1.18 0.00 0.00 3.71
2920 6821 1.940613 GGTGCGGCAGTAATAAAGAGG 59.059 52.381 1.18 0.00 0.00 3.69
2925 6826 2.093181 ACTGATGGTGCGGCAGTAATAA 60.093 45.455 1.18 0.00 40.79 1.40
2929 6830 1.079197 CACTGATGGTGCGGCAGTA 60.079 57.895 1.18 0.00 40.63 2.74
2931 6832 1.450848 ATCACTGATGGTGCGGCAG 60.451 57.895 1.18 0.00 44.98 4.85
2969 6882 2.812011 ACGTACTTCTTTGCAATGGTCC 59.188 45.455 11.99 0.00 0.00 4.46
2970 6883 4.449743 TGTACGTACTTCTTTGCAATGGTC 59.550 41.667 25.12 0.00 0.00 4.02
2971 6884 4.382291 TGTACGTACTTCTTTGCAATGGT 58.618 39.130 25.12 6.08 0.00 3.55
3034 6947 6.821665 TGGTTTTCTTCCATAGTATTCCTTCG 59.178 38.462 0.00 0.00 0.00 3.79
3035 6948 8.753497 ATGGTTTTCTTCCATAGTATTCCTTC 57.247 34.615 0.00 0.00 42.96 3.46
3037 6950 7.068716 GCAATGGTTTTCTTCCATAGTATTCCT 59.931 37.037 0.00 0.00 43.85 3.36
3038 6951 7.147915 TGCAATGGTTTTCTTCCATAGTATTCC 60.148 37.037 0.00 0.00 43.85 3.01
3039 6952 7.771183 TGCAATGGTTTTCTTCCATAGTATTC 58.229 34.615 0.00 0.00 43.85 1.75
3040 6953 7.716799 TGCAATGGTTTTCTTCCATAGTATT 57.283 32.000 0.00 0.00 43.85 1.89
3052 7025 7.041916 TGTTCATCAGATTTTGCAATGGTTTTC 60.042 33.333 0.00 0.00 0.00 2.29
3061 7034 7.978414 TGTTTAAGTTGTTCATCAGATTTTGCA 59.022 29.630 0.00 0.00 0.00 4.08
3105 7078 4.585162 CACAGATTACCCAGTAGTCCTAGG 59.415 50.000 0.82 0.82 0.00 3.02
3110 7088 3.056107 TGCACACAGATTACCCAGTAGTC 60.056 47.826 0.00 0.00 0.00 2.59
3113 7091 2.635427 TGTGCACACAGATTACCCAGTA 59.365 45.455 17.42 0.00 36.21 2.74
3149 7129 3.443037 TGTTTTCACACTTTTGGATGCG 58.557 40.909 0.00 0.00 0.00 4.73
3161 7141 1.573932 CGCGCCAGATGTTTTCACA 59.426 52.632 0.00 0.00 37.31 3.58
3237 7218 1.045350 TGGATGCTCCCCTCGAGAAG 61.045 60.000 15.71 9.42 41.63 2.85
3311 7292 0.469892 AGAGCAAGTTTTGGGGTGGG 60.470 55.000 0.00 0.00 0.00 4.61
3334 7315 2.167487 CCAAAGAGGACCTAGAGCTGAC 59.833 54.545 0.00 0.00 41.22 3.51
3344 7325 4.663334 ACTTATTGGAACCAAAGAGGACC 58.337 43.478 10.36 0.00 41.22 4.46
3345 7326 4.700692 GGACTTATTGGAACCAAAGAGGAC 59.299 45.833 10.36 9.23 41.22 3.85
3346 7327 4.263771 GGGACTTATTGGAACCAAAGAGGA 60.264 45.833 10.36 0.00 41.22 3.71
3347 7328 4.017126 GGGACTTATTGGAACCAAAGAGG 58.983 47.826 10.36 5.19 45.67 3.69
3348 7329 4.017126 GGGGACTTATTGGAACCAAAGAG 58.983 47.826 10.36 12.51 39.55 2.85
3349 7330 3.660669 AGGGGACTTATTGGAACCAAAGA 59.339 43.478 10.36 0.00 37.44 2.52
3350 7331 3.763897 CAGGGGACTTATTGGAACCAAAG 59.236 47.826 10.36 7.00 40.21 2.77
3351 7332 3.399644 TCAGGGGACTTATTGGAACCAAA 59.600 43.478 10.36 0.00 40.21 3.28
3352 7333 2.990284 TCAGGGGACTTATTGGAACCAA 59.010 45.455 8.75 8.75 40.21 3.67
3353 7334 2.307686 GTCAGGGGACTTATTGGAACCA 59.692 50.000 0.00 0.00 40.21 3.67
3354 7335 3.000684 GTCAGGGGACTTATTGGAACC 57.999 52.381 0.00 0.00 40.21 3.62
3381 7362 4.448210 TCACTGGTTTTAAGTCACCTGAC 58.552 43.478 11.87 0.00 45.08 3.51
3382 7363 4.764050 TCACTGGTTTTAAGTCACCTGA 57.236 40.909 11.87 3.02 35.95 3.86
3383 7364 6.391227 AAATCACTGGTTTTAAGTCACCTG 57.609 37.500 6.12 6.12 37.86 4.00
3384 7365 9.802039 TTATAAATCACTGGTTTTAAGTCACCT 57.198 29.630 0.00 0.00 33.76 4.00
3392 7373 9.005777 GGTGTGACTTATAAATCACTGGTTTTA 57.994 33.333 23.27 3.38 44.59 1.52
3393 7374 7.039993 GGGTGTGACTTATAAATCACTGGTTTT 60.040 37.037 23.27 0.00 44.59 2.43
3394 7375 6.433093 GGGTGTGACTTATAAATCACTGGTTT 59.567 38.462 23.27 0.00 44.59 3.27
3395 7376 5.944007 GGGTGTGACTTATAAATCACTGGTT 59.056 40.000 23.27 0.00 44.59 3.67
3396 7377 5.497474 GGGTGTGACTTATAAATCACTGGT 58.503 41.667 23.27 0.32 44.59 4.00
3397 7378 4.570772 CGGGTGTGACTTATAAATCACTGG 59.429 45.833 23.27 9.59 44.59 4.00
3398 7379 5.175859 ACGGGTGTGACTTATAAATCACTG 58.824 41.667 23.27 14.55 44.59 3.66
3399 7380 5.416271 ACGGGTGTGACTTATAAATCACT 57.584 39.130 23.27 4.65 44.59 3.41
3400 7381 6.311723 CAAACGGGTGTGACTTATAAATCAC 58.688 40.000 17.92 17.92 44.56 3.06
3401 7382 5.413213 CCAAACGGGTGTGACTTATAAATCA 59.587 40.000 0.00 0.00 0.00 2.57
3402 7383 5.875930 CCAAACGGGTGTGACTTATAAATC 58.124 41.667 0.00 0.00 0.00 2.17
3403 7384 5.890424 CCAAACGGGTGTGACTTATAAAT 57.110 39.130 0.00 0.00 0.00 1.40
3425 7406 7.763071 AAGATAACTTATAAGTCGGGTGACAAC 59.237 37.037 18.28 2.78 39.96 3.32
3426 7407 7.844009 AAGATAACTTATAAGTCGGGTGACAA 58.156 34.615 18.28 0.00 39.96 3.18
3427 7408 7.414222 AAGATAACTTATAAGTCGGGTGACA 57.586 36.000 18.28 0.00 39.96 3.58
3428 7409 6.922407 GGAAGATAACTTATAAGTCGGGTGAC 59.078 42.308 18.28 7.93 38.57 3.67
3429 7410 6.041296 GGGAAGATAACTTATAAGTCGGGTGA 59.959 42.308 18.28 1.51 38.57 4.02
3430 7411 6.183360 TGGGAAGATAACTTATAAGTCGGGTG 60.183 42.308 18.28 0.00 38.57 4.61
3431 7412 5.901276 TGGGAAGATAACTTATAAGTCGGGT 59.099 40.000 18.28 5.74 38.57 5.28
3432 7413 6.183360 TGTGGGAAGATAACTTATAAGTCGGG 60.183 42.308 18.28 0.00 38.57 5.14
3433 7414 6.700520 GTGTGGGAAGATAACTTATAAGTCGG 59.299 42.308 18.28 0.00 38.57 4.79
3434 7415 6.700520 GGTGTGGGAAGATAACTTATAAGTCG 59.299 42.308 18.28 0.00 38.57 4.18
3435 7416 7.793036 AGGTGTGGGAAGATAACTTATAAGTC 58.207 38.462 18.28 6.64 38.57 3.01
3436 7417 7.750947 AGGTGTGGGAAGATAACTTATAAGT 57.249 36.000 12.50 12.50 42.04 2.24
3437 7418 7.715686 GGAAGGTGTGGGAAGATAACTTATAAG 59.284 40.741 11.05 11.05 36.39 1.73
3438 7419 7.366191 GGGAAGGTGTGGGAAGATAACTTATAA 60.366 40.741 0.00 0.00 36.39 0.98
3439 7420 6.100714 GGGAAGGTGTGGGAAGATAACTTATA 59.899 42.308 0.00 0.00 36.39 0.98
3440 7421 5.104067 GGGAAGGTGTGGGAAGATAACTTAT 60.104 44.000 0.00 0.00 36.39 1.73
3441 7422 4.226620 GGGAAGGTGTGGGAAGATAACTTA 59.773 45.833 0.00 0.00 36.39 2.24
3442 7423 3.010250 GGGAAGGTGTGGGAAGATAACTT 59.990 47.826 0.00 0.00 39.24 2.66
3443 7424 2.576648 GGGAAGGTGTGGGAAGATAACT 59.423 50.000 0.00 0.00 0.00 2.24
3444 7425 2.307686 TGGGAAGGTGTGGGAAGATAAC 59.692 50.000 0.00 0.00 0.00 1.89
3445 7426 2.307686 GTGGGAAGGTGTGGGAAGATAA 59.692 50.000 0.00 0.00 0.00 1.75
3446 7427 1.913419 GTGGGAAGGTGTGGGAAGATA 59.087 52.381 0.00 0.00 0.00 1.98
3447 7428 0.698818 GTGGGAAGGTGTGGGAAGAT 59.301 55.000 0.00 0.00 0.00 2.40
3448 7429 0.696143 TGTGGGAAGGTGTGGGAAGA 60.696 55.000 0.00 0.00 0.00 2.87
3449 7430 0.537371 GTGTGGGAAGGTGTGGGAAG 60.537 60.000 0.00 0.00 0.00 3.46
3450 7431 1.534697 GTGTGGGAAGGTGTGGGAA 59.465 57.895 0.00 0.00 0.00 3.97
3451 7432 2.457323 GGTGTGGGAAGGTGTGGGA 61.457 63.158 0.00 0.00 0.00 4.37
3452 7433 2.115266 GGTGTGGGAAGGTGTGGG 59.885 66.667 0.00 0.00 0.00 4.61
3453 7434 0.178964 ATTGGTGTGGGAAGGTGTGG 60.179 55.000 0.00 0.00 0.00 4.17
3454 7435 1.247567 GATTGGTGTGGGAAGGTGTG 58.752 55.000 0.00 0.00 0.00 3.82
3455 7436 0.850100 TGATTGGTGTGGGAAGGTGT 59.150 50.000 0.00 0.00 0.00 4.16
3456 7437 1.613437 GTTGATTGGTGTGGGAAGGTG 59.387 52.381 0.00 0.00 0.00 4.00
3457 7438 1.216678 TGTTGATTGGTGTGGGAAGGT 59.783 47.619 0.00 0.00 0.00 3.50
3458 7439 1.993956 TGTTGATTGGTGTGGGAAGG 58.006 50.000 0.00 0.00 0.00 3.46
3459 7440 3.156293 TGATGTTGATTGGTGTGGGAAG 58.844 45.455 0.00 0.00 0.00 3.46
3460 7441 3.235750 TGATGTTGATTGGTGTGGGAA 57.764 42.857 0.00 0.00 0.00 3.97
3461 7442 2.967745 TGATGTTGATTGGTGTGGGA 57.032 45.000 0.00 0.00 0.00 4.37
3462 7443 2.417651 GCATGATGTTGATTGGTGTGGG 60.418 50.000 0.00 0.00 0.00 4.61
3463 7444 2.231721 TGCATGATGTTGATTGGTGTGG 59.768 45.455 0.00 0.00 0.00 4.17
3464 7445 3.507786 CTGCATGATGTTGATTGGTGTG 58.492 45.455 0.00 0.00 0.00 3.82
3465 7446 2.494471 CCTGCATGATGTTGATTGGTGT 59.506 45.455 0.00 0.00 0.00 4.16
3466 7447 2.494471 ACCTGCATGATGTTGATTGGTG 59.506 45.455 0.00 0.00 0.00 4.17
3467 7448 2.494471 CACCTGCATGATGTTGATTGGT 59.506 45.455 0.00 0.00 0.00 3.67
3468 7449 2.159156 CCACCTGCATGATGTTGATTGG 60.159 50.000 0.00 0.00 0.00 3.16
3469 7450 2.494471 ACCACCTGCATGATGTTGATTG 59.506 45.455 0.00 0.00 0.00 2.67
3470 7451 2.494471 CACCACCTGCATGATGTTGATT 59.506 45.455 0.00 0.00 0.00 2.57
3471 7452 2.097036 CACCACCTGCATGATGTTGAT 58.903 47.619 0.00 0.00 0.00 2.57
3472 7453 1.536940 CACCACCTGCATGATGTTGA 58.463 50.000 0.00 0.00 0.00 3.18
3473 7454 0.528924 CCACCACCTGCATGATGTTG 59.471 55.000 0.00 0.00 0.00 3.33
3474 7455 0.612732 CCCACCACCTGCATGATGTT 60.613 55.000 0.00 0.00 0.00 2.71
3475 7456 1.000521 CCCACCACCTGCATGATGT 60.001 57.895 0.00 0.00 0.00 3.06
3476 7457 1.033746 GTCCCACCACCTGCATGATG 61.034 60.000 0.00 0.00 0.00 3.07
3477 7458 1.304282 GTCCCACCACCTGCATGAT 59.696 57.895 0.00 0.00 0.00 2.45
3478 7459 2.756400 GTCCCACCACCTGCATGA 59.244 61.111 0.00 0.00 0.00 3.07
3479 7460 2.361610 GGTCCCACCACCTGCATG 60.362 66.667 0.00 0.00 38.42 4.06
3480 7461 3.661648 GGGTCCCACCACCTGCAT 61.662 66.667 1.78 0.00 41.02 3.96
3482 7463 3.661648 ATGGGTCCCACCACCTGC 61.662 66.667 14.57 0.00 44.72 4.85
3483 7464 2.356278 CATGGGTCCCACCACCTG 59.644 66.667 14.57 2.94 44.72 4.00
3484 7465 3.661648 GCATGGGTCCCACCACCT 61.662 66.667 14.57 0.00 44.72 4.00
3485 7466 3.521765 TTGCATGGGTCCCACCACC 62.522 63.158 14.57 2.26 44.72 4.61
3486 7467 1.118356 TTTTGCATGGGTCCCACCAC 61.118 55.000 14.57 6.21 44.72 4.16
3487 7468 0.831288 CTTTTGCATGGGTCCCACCA 60.831 55.000 14.57 11.02 46.24 4.17
3488 7469 1.543944 CCTTTTGCATGGGTCCCACC 61.544 60.000 14.57 8.17 35.80 4.61
3489 7470 1.543944 CCCTTTTGCATGGGTCCCAC 61.544 60.000 14.57 1.42 35.80 4.61
3490 7471 1.229145 CCCTTTTGCATGGGTCCCA 60.229 57.895 14.64 14.64 38.65 4.37
3491 7472 1.989508 CCCCTTTTGCATGGGTCCC 60.990 63.158 15.82 0.00 41.82 4.46
3492 7473 1.989508 CCCCCTTTTGCATGGGTCC 60.990 63.158 15.82 0.00 41.82 4.46
3493 7474 3.712287 CCCCCTTTTGCATGGGTC 58.288 61.111 15.82 0.00 41.82 4.46
3494 7475 2.950970 ACCCCCTTTTGCATGGGT 59.049 55.556 15.82 11.03 46.50 4.51
3495 7476 1.229145 TCACCCCCTTTTGCATGGG 60.229 57.895 11.68 11.68 44.03 4.00
3496 7477 0.542702 AGTCACCCCCTTTTGCATGG 60.543 55.000 0.00 0.00 0.00 3.66
3497 7478 1.341080 AAGTCACCCCCTTTTGCATG 58.659 50.000 0.00 0.00 0.00 4.06
3498 7479 2.990740 TAAGTCACCCCCTTTTGCAT 57.009 45.000 0.00 0.00 0.00 3.96
3499 7480 2.990740 ATAAGTCACCCCCTTTTGCA 57.009 45.000 0.00 0.00 0.00 4.08
3500 7481 2.681344 CGTATAAGTCACCCCCTTTTGC 59.319 50.000 0.00 0.00 0.00 3.68
3501 7482 3.946606 ACGTATAAGTCACCCCCTTTTG 58.053 45.455 0.00 0.00 0.00 2.44
3502 7483 4.645863 AACGTATAAGTCACCCCCTTTT 57.354 40.909 0.00 0.00 0.00 2.27
3503 7484 4.645863 AAACGTATAAGTCACCCCCTTT 57.354 40.909 0.00 0.00 0.00 3.11
3504 7485 4.645863 AAAACGTATAAGTCACCCCCTT 57.354 40.909 0.00 0.00 0.00 3.95
3505 7486 5.249163 ACTTAAAACGTATAAGTCACCCCCT 59.751 40.000 16.70 0.00 38.85 4.79
3506 7487 5.491070 ACTTAAAACGTATAAGTCACCCCC 58.509 41.667 16.70 0.00 38.85 5.40
3507 7488 6.128200 CCAACTTAAAACGTATAAGTCACCCC 60.128 42.308 20.57 0.00 41.49 4.95
3508 7489 6.128200 CCCAACTTAAAACGTATAAGTCACCC 60.128 42.308 20.57 0.00 41.49 4.61
3509 7490 6.128200 CCCCAACTTAAAACGTATAAGTCACC 60.128 42.308 20.57 0.00 41.49 4.02
3510 7491 6.427853 ACCCCAACTTAAAACGTATAAGTCAC 59.572 38.462 20.57 0.00 41.49 3.67
3511 7492 6.427547 CACCCCAACTTAAAACGTATAAGTCA 59.572 38.462 20.57 0.00 41.49 3.41
3512 7493 6.128200 CCACCCCAACTTAAAACGTATAAGTC 60.128 42.308 20.57 0.00 41.49 3.01
3513 7494 5.706833 CCACCCCAACTTAAAACGTATAAGT 59.293 40.000 16.70 16.70 43.57 2.24
3514 7495 5.939296 TCCACCCCAACTTAAAACGTATAAG 59.061 40.000 15.69 15.69 36.62 1.73
3515 7496 5.874093 TCCACCCCAACTTAAAACGTATAA 58.126 37.500 0.00 0.00 0.00 0.98
3516 7497 5.490159 CTCCACCCCAACTTAAAACGTATA 58.510 41.667 0.00 0.00 0.00 1.47
3517 7498 4.329392 CTCCACCCCAACTTAAAACGTAT 58.671 43.478 0.00 0.00 0.00 3.06
3518 7499 3.742385 CTCCACCCCAACTTAAAACGTA 58.258 45.455 0.00 0.00 0.00 3.57
3519 7500 2.578786 CTCCACCCCAACTTAAAACGT 58.421 47.619 0.00 0.00 0.00 3.99
3520 7501 1.268625 GCTCCACCCCAACTTAAAACG 59.731 52.381 0.00 0.00 0.00 3.60
3521 7502 2.312390 TGCTCCACCCCAACTTAAAAC 58.688 47.619 0.00 0.00 0.00 2.43
3522 7503 2.696187 GTTGCTCCACCCCAACTTAAAA 59.304 45.455 0.00 0.00 38.55 1.52
3523 7504 2.091555 AGTTGCTCCACCCCAACTTAAA 60.092 45.455 0.56 0.00 46.86 1.52
3524 7505 1.497286 AGTTGCTCCACCCCAACTTAA 59.503 47.619 0.56 0.00 46.86 1.85
3525 7506 1.145571 AGTTGCTCCACCCCAACTTA 58.854 50.000 0.56 0.00 46.86 2.24
3526 7507 1.930520 AGTTGCTCCACCCCAACTT 59.069 52.632 0.56 0.00 46.86 2.66
3527 7508 3.674278 AGTTGCTCCACCCCAACT 58.326 55.556 0.56 0.56 44.86 3.16
3528 7509 1.818674 CATAAGTTGCTCCACCCCAAC 59.181 52.381 0.00 0.00 41.13 3.77
3529 7510 1.707989 TCATAAGTTGCTCCACCCCAA 59.292 47.619 0.00 0.00 0.00 4.12
3530 7511 1.004277 GTCATAAGTTGCTCCACCCCA 59.996 52.381 0.00 0.00 0.00 4.96
3531 7512 1.282157 AGTCATAAGTTGCTCCACCCC 59.718 52.381 0.00 0.00 0.00 4.95
3532 7513 2.789409 AGTCATAAGTTGCTCCACCC 57.211 50.000 0.00 0.00 0.00 4.61
3533 7514 7.484035 CTTATAAGTCATAAGTTGCTCCACC 57.516 40.000 4.18 0.00 40.84 4.61
3553 7534 7.998964 CCCAACTTATAAGTCATCCCAACTTAT 59.001 37.037 18.28 11.86 46.48 1.73
3554 7535 7.343357 CCCAACTTATAAGTCATCCCAACTTA 58.657 38.462 18.28 0.00 41.91 2.24
3555 7536 6.187682 CCCAACTTATAAGTCATCCCAACTT 58.812 40.000 18.28 0.00 38.57 2.66
3556 7537 5.340027 CCCCAACTTATAAGTCATCCCAACT 60.340 44.000 18.28 0.00 38.57 3.16
3557 7538 4.887655 CCCCAACTTATAAGTCATCCCAAC 59.112 45.833 18.28 0.00 38.57 3.77
3558 7539 4.630184 GCCCCAACTTATAAGTCATCCCAA 60.630 45.833 18.28 0.00 38.57 4.12
3559 7540 3.117663 GCCCCAACTTATAAGTCATCCCA 60.118 47.826 18.28 0.00 38.57 4.37
3560 7541 3.138468 AGCCCCAACTTATAAGTCATCCC 59.862 47.826 18.28 7.76 38.57 3.85
3561 7542 4.137543 CAGCCCCAACTTATAAGTCATCC 58.862 47.826 18.28 6.82 38.57 3.51
3562 7543 4.781934 ACAGCCCCAACTTATAAGTCATC 58.218 43.478 18.28 6.84 38.57 2.92
3563 7544 4.862641 ACAGCCCCAACTTATAAGTCAT 57.137 40.909 18.28 1.19 38.57 3.06
3564 7545 4.650972 AACAGCCCCAACTTATAAGTCA 57.349 40.909 18.28 0.00 38.57 3.41
3565 7546 4.157840 CCAAACAGCCCCAACTTATAAGTC 59.842 45.833 18.28 5.93 38.57 3.01
3566 7547 4.086457 CCAAACAGCCCCAACTTATAAGT 58.914 43.478 12.50 12.50 42.04 2.24
3567 7548 3.119137 GCCAAACAGCCCCAACTTATAAG 60.119 47.826 11.05 11.05 0.00 1.73
3568 7549 2.829120 GCCAAACAGCCCCAACTTATAA 59.171 45.455 0.00 0.00 0.00 0.98
3569 7550 2.225142 TGCCAAACAGCCCCAACTTATA 60.225 45.455 0.00 0.00 0.00 0.98
3570 7551 1.266178 GCCAAACAGCCCCAACTTAT 58.734 50.000 0.00 0.00 0.00 1.73
3571 7552 0.105964 TGCCAAACAGCCCCAACTTA 60.106 50.000 0.00 0.00 0.00 2.24
3572 7553 0.980231 TTGCCAAACAGCCCCAACTT 60.980 50.000 0.00 0.00 0.00 2.66
3573 7554 0.980231 TTTGCCAAACAGCCCCAACT 60.980 50.000 0.00 0.00 0.00 3.16
3574 7555 0.107459 TTTTGCCAAACAGCCCCAAC 60.107 50.000 0.00 0.00 0.00 3.77
3575 7556 0.842635 ATTTTGCCAAACAGCCCCAA 59.157 45.000 0.00 0.00 0.00 4.12
3576 7557 1.722034 TATTTTGCCAAACAGCCCCA 58.278 45.000 0.00 0.00 0.00 4.96
3577 7558 2.038426 ACTTATTTTGCCAAACAGCCCC 59.962 45.455 0.00 0.00 0.00 5.80
3578 7559 3.244044 TGACTTATTTTGCCAAACAGCCC 60.244 43.478 0.00 0.00 0.00 5.19
3579 7560 3.740832 GTGACTTATTTTGCCAAACAGCC 59.259 43.478 0.00 0.00 0.00 4.85
3580 7561 4.620982 AGTGACTTATTTTGCCAAACAGC 58.379 39.130 0.00 0.00 0.00 4.40
3581 7562 7.538303 AAAAGTGACTTATTTTGCCAAACAG 57.462 32.000 0.00 0.00 0.00 3.16
3582 7563 7.746929 CAAAAAGTGACTTATTTTGCCAAACA 58.253 30.769 8.92 0.00 37.27 2.83
3592 7573 9.986833 GTCAAAAATTGCAAAAAGTGACTTATT 57.013 25.926 20.62 0.00 33.12 1.40
3593 7574 9.382275 AGTCAAAAATTGCAAAAAGTGACTTAT 57.618 25.926 23.06 10.24 41.13 1.73
3594 7575 8.770438 AGTCAAAAATTGCAAAAAGTGACTTA 57.230 26.923 23.06 0.00 41.13 2.24
3595 7576 7.671495 AGTCAAAAATTGCAAAAAGTGACTT 57.329 28.000 23.06 13.44 41.13 3.01
3596 7577 7.671495 AAGTCAAAAATTGCAAAAAGTGACT 57.329 28.000 23.06 23.06 44.69 3.41
3604 7585 9.606631 ACCAACTTATAAGTCAAAAATTGCAAA 57.393 25.926 18.28 0.00 38.57 3.68
3605 7586 9.039870 CACCAACTTATAAGTCAAAAATTGCAA 57.960 29.630 18.28 0.00 38.57 4.08
3606 7587 8.417106 TCACCAACTTATAAGTCAAAAATTGCA 58.583 29.630 18.28 0.00 38.57 4.08
3607 7588 8.810652 TCACCAACTTATAAGTCAAAAATTGC 57.189 30.769 18.28 0.00 38.57 3.56
3623 7604 9.271828 GTTTGATTCCAAATAAATCACCAACTT 57.728 29.630 0.00 0.00 43.37 2.66
3624 7605 8.428063 TGTTTGATTCCAAATAAATCACCAACT 58.572 29.630 11.59 0.00 43.37 3.16
3625 7606 8.600449 TGTTTGATTCCAAATAAATCACCAAC 57.400 30.769 0.00 3.23 43.37 3.77
3626 7607 7.877097 CCTGTTTGATTCCAAATAAATCACCAA 59.123 33.333 0.00 0.00 43.37 3.67
3627 7608 7.385267 CCTGTTTGATTCCAAATAAATCACCA 58.615 34.615 0.00 0.00 43.37 4.17
3628 7609 6.818142 CCCTGTTTGATTCCAAATAAATCACC 59.182 38.462 0.00 0.00 43.37 4.02
3629 7610 6.313658 GCCCTGTTTGATTCCAAATAAATCAC 59.686 38.462 0.00 0.00 43.37 3.06
3630 7611 6.405538 GCCCTGTTTGATTCCAAATAAATCA 58.594 36.000 0.00 0.00 43.37 2.57
3631 7612 5.817296 GGCCCTGTTTGATTCCAAATAAATC 59.183 40.000 0.00 0.00 43.37 2.17
3632 7613 5.339118 GGGCCCTGTTTGATTCCAAATAAAT 60.339 40.000 17.04 0.00 43.37 1.40
3633 7614 4.019771 GGGCCCTGTTTGATTCCAAATAAA 60.020 41.667 17.04 0.00 43.37 1.40
3634 7615 3.517500 GGGCCCTGTTTGATTCCAAATAA 59.482 43.478 17.04 0.00 43.37 1.40
3635 7616 3.103742 GGGCCCTGTTTGATTCCAAATA 58.896 45.455 17.04 0.00 43.37 1.40
3636 7617 1.908619 GGGCCCTGTTTGATTCCAAAT 59.091 47.619 17.04 0.00 43.37 2.32
3637 7618 1.132881 AGGGCCCTGTTTGATTCCAAA 60.133 47.619 28.05 0.00 39.74 3.28
3638 7619 0.486879 AGGGCCCTGTTTGATTCCAA 59.513 50.000 28.05 0.00 0.00 3.53
3639 7620 1.284785 CTAGGGCCCTGTTTGATTCCA 59.715 52.381 35.81 9.20 0.00 3.53
3640 7621 1.285078 ACTAGGGCCCTGTTTGATTCC 59.715 52.381 35.81 0.00 0.00 3.01
3641 7622 2.290960 ACACTAGGGCCCTGTTTGATTC 60.291 50.000 35.81 0.00 0.00 2.52
3642 7623 1.710809 ACACTAGGGCCCTGTTTGATT 59.289 47.619 35.81 8.02 0.00 2.57
3643 7624 1.372501 ACACTAGGGCCCTGTTTGAT 58.627 50.000 35.81 11.94 0.00 2.57
3644 7625 1.906574 CTACACTAGGGCCCTGTTTGA 59.093 52.381 35.81 13.47 0.00 2.69
3645 7626 1.628846 ACTACACTAGGGCCCTGTTTG 59.371 52.381 35.81 27.49 0.00 2.93
3646 7627 1.907255 GACTACACTAGGGCCCTGTTT 59.093 52.381 35.81 23.22 0.00 2.83
3647 7628 1.569653 GACTACACTAGGGCCCTGTT 58.430 55.000 35.81 18.31 0.00 3.16
3648 7629 0.325390 GGACTACACTAGGGCCCTGT 60.325 60.000 35.81 26.24 0.00 4.00
3649 7630 0.325296 TGGACTACACTAGGGCCCTG 60.325 60.000 35.81 25.05 0.00 4.45
3650 7631 0.642710 ATGGACTACACTAGGGCCCT 59.357 55.000 31.35 31.35 0.00 5.19
3651 7632 1.049402 GATGGACTACACTAGGGCCC 58.951 60.000 16.46 16.46 0.00 5.80
3652 7633 1.964933 GAGATGGACTACACTAGGGCC 59.035 57.143 0.00 0.00 0.00 5.80
3653 7634 2.362717 GTGAGATGGACTACACTAGGGC 59.637 54.545 0.00 0.00 0.00 5.19
3654 7635 3.886505 GAGTGAGATGGACTACACTAGGG 59.113 52.174 0.00 0.00 42.45 3.53
3655 7636 3.562141 CGAGTGAGATGGACTACACTAGG 59.438 52.174 0.00 0.00 42.45 3.02
3661 7642 1.746220 ACTGCGAGTGAGATGGACTAC 59.254 52.381 0.00 0.00 0.00 2.73
3677 7658 1.863454 CTGTCTGTGACTTGTGACTGC 59.137 52.381 0.00 0.00 33.15 4.40
3693 7674 1.523095 GTTTCTGCGTGTCTGTCTGTC 59.477 52.381 0.00 0.00 0.00 3.51
3849 7830 4.436079 ACTTACTGAAGGTTCCCAGGTAT 58.564 43.478 0.00 0.00 36.95 2.73
3855 7836 5.847111 ACAAAAACTTACTGAAGGTTCCC 57.153 39.130 0.00 0.00 41.96 3.97
3938 7924 8.934507 AGATTACAGTTAGATTAGCAACAGTC 57.065 34.615 0.00 0.00 0.00 3.51
4003 7991 3.966006 AGACATGAGACATCTACTGCCAT 59.034 43.478 0.00 0.00 0.00 4.40
4536 8572 0.106894 TTGCACCACCGTACATGTGA 59.893 50.000 9.11 0.00 35.74 3.58
4543 8579 1.669440 GTCCTCTTGCACCACCGTA 59.331 57.895 0.00 0.00 0.00 4.02
4578 8614 3.953775 CACAACACCGCCTCCCCT 61.954 66.667 0.00 0.00 0.00 4.79
4607 8643 2.490148 CCTACCCTCGCATCGCAGA 61.490 63.158 0.00 0.00 45.75 4.26
4623 8659 1.099295 CATGCATCATCGCACACCCT 61.099 55.000 0.00 0.00 46.56 4.34
4627 8663 0.740516 ACGACATGCATCATCGCACA 60.741 50.000 23.41 0.00 46.56 4.57
4628 8664 0.374758 AACGACATGCATCATCGCAC 59.625 50.000 23.41 1.09 46.56 5.34
4630 8666 0.927083 GCAACGACATGCATCATCGC 60.927 55.000 23.41 9.09 45.70 4.58
4631 8667 3.138296 GCAACGACATGCATCATCG 57.862 52.632 22.36 22.36 45.70 3.84
4671 8708 0.893727 AAATTGTCGGCACCTCCCAC 60.894 55.000 0.00 0.00 0.00 4.61
4844 8888 3.190849 CGCATCACCACCGCTCTG 61.191 66.667 0.00 0.00 0.00 3.35
4913 8966 5.098893 CAGCTCAGCCGATGTAATACTATC 58.901 45.833 0.00 0.00 0.00 2.08
5000 9055 3.889692 ACTGCCCAGGGTGTGGTG 61.890 66.667 7.55 0.00 46.37 4.17
5001 9056 3.889692 CACTGCCCAGGGTGTGGT 61.890 66.667 20.05 7.24 46.37 4.16
5033 9088 4.418401 GTACGCACCGTGGCCGTA 62.418 66.667 0.00 7.15 41.39 4.02
5042 9097 3.259751 GATTCCGGCGTACGCACC 61.260 66.667 37.99 22.55 44.11 5.01
5043 9098 3.613702 CGATTCCGGCGTACGCAC 61.614 66.667 37.99 26.25 44.11 5.34
5136 9195 1.089920 CTCAGATTTTGCTCACCGGG 58.910 55.000 6.32 0.00 0.00 5.73
5141 9200 0.321919 AGCGCCTCAGATTTTGCTCA 60.322 50.000 2.29 0.00 0.00 4.26
5145 9204 1.226211 CGCAGCGCCTCAGATTTTG 60.226 57.895 2.29 0.00 0.00 2.44
5146 9205 1.672356 ACGCAGCGCCTCAGATTTT 60.672 52.632 16.61 0.00 0.00 1.82
5211 9285 1.878953 TCTTTCACGAGCAAAGTCCC 58.121 50.000 0.00 0.00 33.32 4.46
5214 9288 1.537202 GGCATCTTTCACGAGCAAAGT 59.463 47.619 0.00 0.00 33.32 2.66
5281 9632 0.984230 GCCATCCCCTCGATTGGATA 59.016 55.000 13.74 0.00 39.36 2.59
5333 9686 0.449786 ACGACTGAGAGATGACGCTG 59.550 55.000 0.00 0.00 0.00 5.18
5345 9698 1.374125 CCGCAATGGACACGACTGA 60.374 57.895 0.00 0.00 42.00 3.41
5346 9699 1.374125 TCCGCAATGGACACGACTG 60.374 57.895 0.00 0.00 43.74 3.51
5347 9700 3.056458 TCCGCAATGGACACGACT 58.944 55.556 0.00 0.00 43.74 4.18
5386 9739 6.014499 AGGAAAGAATCTTGTCCTCGAAGTAA 60.014 38.462 15.94 0.00 35.52 2.24
5389 9742 4.629200 CAGGAAAGAATCTTGTCCTCGAAG 59.371 45.833 17.72 8.32 38.48 3.79
5391 9744 3.055819 CCAGGAAAGAATCTTGTCCTCGA 60.056 47.826 17.72 0.00 38.48 4.04
5393 9746 4.019771 AGTCCAGGAAAGAATCTTGTCCTC 60.020 45.833 17.72 10.86 38.48 3.71
5437 9790 6.612247 TGCTCGATCTCTGTAAAAACAAAA 57.388 33.333 0.00 0.00 0.00 2.44
5438 9791 6.427150 GTTGCTCGATCTCTGTAAAAACAAA 58.573 36.000 0.00 0.00 0.00 2.83
5439 9792 5.049680 GGTTGCTCGATCTCTGTAAAAACAA 60.050 40.000 0.00 0.00 0.00 2.83
5440 9793 4.451096 GGTTGCTCGATCTCTGTAAAAACA 59.549 41.667 0.00 0.00 0.00 2.83
5441 9794 4.434330 CGGTTGCTCGATCTCTGTAAAAAC 60.434 45.833 0.00 0.00 0.00 2.43
5442 9795 3.678072 CGGTTGCTCGATCTCTGTAAAAA 59.322 43.478 0.00 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.