Multiple sequence alignment - TraesCS4B01G292200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G292200 chr4B 100.000 4052 0 0 1 4052 577657105 577661156 0.000000e+00 7483
1 TraesCS4B01G292200 chr2B 84.653 4053 550 40 30 4043 767917137 767921156 0.000000e+00 3973
2 TraesCS4B01G292200 chr1B 84.165 4067 558 55 19 4052 611328693 611324680 0.000000e+00 3864
3 TraesCS4B01G292200 chr6B 91.139 237 20 1 3816 4052 184543075 184542840 1.820000e-83 320


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G292200 chr4B 577657105 577661156 4051 False 7483 7483 100.000 1 4052 1 chr4B.!!$F1 4051
1 TraesCS4B01G292200 chr2B 767917137 767921156 4019 False 3973 3973 84.653 30 4043 1 chr2B.!!$F1 4013
2 TraesCS4B01G292200 chr1B 611324680 611328693 4013 True 3864 3864 84.165 19 4052 1 chr1B.!!$R1 4033

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
646 688 0.103208 CGGCAGCTATTCGGAGTTCT 59.897 55.0 0.00 0.00 0.00 3.01 F
1404 1461 0.033920 CTTGTCCTTTTGGCCAAGCC 59.966 55.0 19.48 6.63 46.62 4.35 F
2428 2488 0.035725 TGCAGTGGCTCCTTCAGATG 60.036 55.0 0.00 0.00 41.91 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2504 2564 0.036875 AAGTTGGCTAGTGTCAGGCC 59.963 55.0 0.00 0.0 45.45 5.19 R
2584 2644 0.177604 CCAGTCTGGGAGTCATGAGC 59.822 60.0 11.46 0.0 32.67 4.26 R
3551 3615 0.793617 TCCTTTCCTCTGGGACCTCT 59.206 55.0 0.00 0.0 42.05 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.078516 GCCTAGGCCACCGTCGTT 62.079 66.667 24.19 0.00 34.56 3.85
26 27 2.125673 CTAGGCCACCGTCGTTGG 60.126 66.667 5.01 4.12 0.00 3.77
133 134 4.016706 CGGCCACTCCTCCCGTTT 62.017 66.667 2.24 0.00 37.36 3.60
134 135 2.359975 GGCCACTCCTCCCGTTTG 60.360 66.667 0.00 0.00 0.00 2.93
135 136 2.359975 GCCACTCCTCCCGTTTGG 60.360 66.667 0.00 0.00 0.00 3.28
136 137 3.157680 CCACTCCTCCCGTTTGGT 58.842 61.111 0.00 0.00 34.77 3.67
142 144 1.073199 CCTCCCGTTTGGTCTGCTT 59.927 57.895 0.00 0.00 34.77 3.91
149 151 1.152860 TTTGGTCTGCTTTGGGCGA 60.153 52.632 0.00 0.00 45.43 5.54
150 152 0.539438 TTTGGTCTGCTTTGGGCGAT 60.539 50.000 0.00 0.00 45.43 4.58
161 203 0.463474 TTGGGCGATTGCGATCATGA 60.463 50.000 14.39 0.00 44.10 3.07
185 227 2.279741 TCTCCGATCTGAATTTTGCCG 58.720 47.619 0.00 0.00 0.00 5.69
196 238 3.808218 TTTTGCCGCTGGAAGGGCT 62.808 57.895 3.51 0.00 46.44 5.19
204 246 1.135286 CGCTGGAAGGGCTTTTGAATC 60.135 52.381 0.00 0.00 41.12 2.52
205 247 1.205655 GCTGGAAGGGCTTTTGAATCC 59.794 52.381 0.00 0.00 0.00 3.01
227 269 4.633126 CCTACATCAAGAATCAGTGTGGTG 59.367 45.833 0.00 0.00 0.00 4.17
228 270 4.090761 ACATCAAGAATCAGTGTGGTGT 57.909 40.909 0.00 0.00 0.00 4.16
230 272 4.889409 ACATCAAGAATCAGTGTGGTGTTT 59.111 37.500 0.00 0.00 0.00 2.83
233 275 4.576053 TCAAGAATCAGTGTGGTGTTTCAG 59.424 41.667 0.00 0.00 31.25 3.02
235 277 4.130118 AGAATCAGTGTGGTGTTTCAGTC 58.870 43.478 0.00 0.00 31.25 3.51
241 283 3.117888 AGTGTGGTGTTTCAGTCAATCCT 60.118 43.478 0.00 0.00 0.00 3.24
242 284 4.102524 AGTGTGGTGTTTCAGTCAATCCTA 59.897 41.667 0.00 0.00 0.00 2.94
243 285 5.003804 GTGTGGTGTTTCAGTCAATCCTAT 58.996 41.667 0.00 0.00 0.00 2.57
253 295 4.401202 TCAGTCAATCCTATTGCTACGTCA 59.599 41.667 0.00 0.00 0.00 4.35
254 296 5.069119 TCAGTCAATCCTATTGCTACGTCAT 59.931 40.000 0.00 0.00 0.00 3.06
255 297 5.403766 CAGTCAATCCTATTGCTACGTCATC 59.596 44.000 0.00 0.00 0.00 2.92
256 298 4.383052 GTCAATCCTATTGCTACGTCATCG 59.617 45.833 0.00 0.00 43.34 3.84
257 299 2.417339 TCCTATTGCTACGTCATCGC 57.583 50.000 0.00 0.00 41.18 4.58
297 339 7.386848 CCTTGTGGTAAAGTTTTCTCGATCTAA 59.613 37.037 0.00 0.00 0.00 2.10
325 367 2.025226 TCTGAATAGAGACTCCGTGGGT 60.025 50.000 0.00 0.00 0.00 4.51
334 376 0.684805 ACTCCGTGGGTCTCATCCTC 60.685 60.000 0.00 0.00 0.00 3.71
361 403 0.667993 TTTTTGGTGGCTCTGCTTCG 59.332 50.000 0.00 0.00 0.00 3.79
397 439 6.319658 TCTCACATATTGAAGGCTGGAATTTC 59.680 38.462 0.00 0.00 32.21 2.17
426 468 3.443329 TGTGTTTCTTCATGTGCTGTTGT 59.557 39.130 0.00 0.00 0.00 3.32
433 475 5.718146 TCTTCATGTGCTGTTGTTTTTGAA 58.282 33.333 0.00 0.00 0.00 2.69
440 482 6.963796 TGTGCTGTTGTTTTTGAAATTGTTT 58.036 28.000 0.00 0.00 0.00 2.83
442 484 5.855395 TGCTGTTGTTTTTGAAATTGTTTGC 59.145 32.000 0.00 0.00 0.00 3.68
463 505 2.354103 CGGTGGCAATATCTCGGATCAT 60.354 50.000 0.00 0.00 0.00 2.45
491 533 3.054065 GTCCATGGATTTTCTCCTCTGGT 60.054 47.826 19.62 0.00 45.21 4.00
496 538 1.734465 GATTTTCTCCTCTGGTGTGCG 59.266 52.381 0.00 0.00 0.00 5.34
504 546 4.489771 CTGGTGTGCGGGGGATCC 62.490 72.222 1.92 1.92 0.00 3.36
525 567 2.476619 CGGATCTTCGGATTGCATACAC 59.523 50.000 0.00 0.00 34.38 2.90
526 568 3.466836 GGATCTTCGGATTGCATACACA 58.533 45.455 0.00 0.00 34.38 3.72
541 583 5.123027 TGCATACACAAATTATCTTCGCACA 59.877 36.000 0.00 0.00 0.00 4.57
560 602 3.763360 CACAGCCAATTAGGAATGGACAA 59.237 43.478 0.00 0.00 41.22 3.18
566 608 5.362430 GCCAATTAGGAATGGACAATGGTTA 59.638 40.000 0.00 0.00 41.22 2.85
596 638 2.216046 ACAACCGCAGATCATATGCTG 58.784 47.619 2.14 0.00 41.61 4.41
610 652 5.247862 TCATATGCTGAAGTTGCTCAAGAA 58.752 37.500 0.00 0.00 0.00 2.52
614 656 3.181455 TGCTGAAGTTGCTCAAGAACCTA 60.181 43.478 0.00 0.00 0.00 3.08
616 658 4.800914 GCTGAAGTTGCTCAAGAACCTAGA 60.801 45.833 0.00 0.00 0.00 2.43
639 681 2.892373 TTTGTTTCGGCAGCTATTCG 57.108 45.000 0.00 0.00 0.00 3.34
641 683 0.248012 TGTTTCGGCAGCTATTCGGA 59.752 50.000 0.00 0.00 0.00 4.55
646 688 0.103208 CGGCAGCTATTCGGAGTTCT 59.897 55.000 0.00 0.00 0.00 3.01
648 690 2.633488 GGCAGCTATTCGGAGTTCTTT 58.367 47.619 0.00 0.00 0.00 2.52
649 691 2.352960 GGCAGCTATTCGGAGTTCTTTG 59.647 50.000 0.00 0.00 0.00 2.77
652 694 2.572104 AGCTATTCGGAGTTCTTTGGGT 59.428 45.455 0.00 0.00 0.00 4.51
682 724 2.159627 AGTTTCGGCAGCATTAACTTCG 59.840 45.455 0.00 0.00 0.00 3.79
708 750 0.472898 AATACTCCTTTAGGGCGGGC 59.527 55.000 0.00 0.00 35.41 6.13
743 785 2.684001 TCGAATTAATGGACCTGCGT 57.316 45.000 0.00 0.00 0.00 5.24
745 787 2.675844 TCGAATTAATGGACCTGCGTTG 59.324 45.455 0.00 0.00 0.00 4.10
757 799 2.185310 CTGCGTTGTCTAAGGGGCCT 62.185 60.000 0.84 0.00 0.00 5.19
769 811 5.131308 GTCTAAGGGGCCTTCTTCTAATTCT 59.869 44.000 13.65 0.00 37.47 2.40
784 826 1.271840 ATTCTAGTCAGCCGGCCCAA 61.272 55.000 26.15 5.73 0.00 4.12
799 841 1.535204 CCCAAGGCCGCATTTTCTGT 61.535 55.000 0.00 0.00 0.00 3.41
802 844 1.039856 AAGGCCGCATTTTCTGTGTT 58.960 45.000 0.00 0.00 33.29 3.32
805 847 0.729140 GCCGCATTTTCTGTGTTCGG 60.729 55.000 0.00 0.00 38.51 4.30
824 866 2.126031 GTCTCGCTTCGGACCACC 60.126 66.667 0.00 0.00 0.00 4.61
826 868 2.125912 CTCGCTTCGGACCACCTG 60.126 66.667 0.00 0.00 0.00 4.00
850 892 1.815421 CGCCTGCTCTAACCGCATT 60.815 57.895 0.00 0.00 36.70 3.56
852 894 0.744414 GCCTGCTCTAACCGCATTCA 60.744 55.000 0.00 0.00 36.70 2.57
853 895 1.009829 CCTGCTCTAACCGCATTCAC 58.990 55.000 0.00 0.00 36.70 3.18
878 920 2.202395 GCCTGCAAAAGACTGGGCA 61.202 57.895 4.59 0.00 39.38 5.36
883 925 1.340889 TGCAAAAGACTGGGCAACATC 59.659 47.619 0.00 0.00 39.74 3.06
886 928 3.152341 CAAAAGACTGGGCAACATCTCT 58.848 45.455 0.00 0.00 39.74 3.10
887 929 2.486472 AAGACTGGGCAACATCTCTG 57.514 50.000 0.00 0.00 39.74 3.35
931 974 0.390209 GGTTAACGCTACGGCTTCCA 60.390 55.000 0.00 0.00 36.09 3.53
932 975 1.431496 GTTAACGCTACGGCTTCCAA 58.569 50.000 0.00 0.00 36.09 3.53
943 995 2.301870 ACGGCTTCCAATGTTAGAGTCA 59.698 45.455 0.00 0.00 0.00 3.41
1014 1068 2.581354 GAGATGACCAGTGCCGCT 59.419 61.111 0.00 0.00 0.00 5.52
1053 1107 2.293184 TGACCAAGGCTCTATTCCTCCT 60.293 50.000 0.00 0.00 32.45 3.69
1056 1110 2.402564 CAAGGCTCTATTCCTCCTCCA 58.597 52.381 0.00 0.00 32.45 3.86
1057 1111 2.095604 AGGCTCTATTCCTCCTCCAC 57.904 55.000 0.00 0.00 0.00 4.02
1058 1112 1.052617 GGCTCTATTCCTCCTCCACC 58.947 60.000 0.00 0.00 0.00 4.61
1063 1117 2.317900 TCTATTCCTCCTCCACCCAGAA 59.682 50.000 0.00 0.00 0.00 3.02
1065 1119 2.961536 TTCCTCCTCCACCCAGAATA 57.038 50.000 0.00 0.00 0.00 1.75
1067 1121 2.977808 TCCTCCTCCACCCAGAATATC 58.022 52.381 0.00 0.00 0.00 1.63
1068 1122 2.250008 TCCTCCTCCACCCAGAATATCA 59.750 50.000 0.00 0.00 0.00 2.15
1073 1127 3.325135 CCTCCACCCAGAATATCACCTAC 59.675 52.174 0.00 0.00 0.00 3.18
1077 1131 3.325135 CACCCAGAATATCACCTACCCTC 59.675 52.174 0.00 0.00 0.00 4.30
1080 1134 4.227197 CCAGAATATCACCTACCCTCACT 58.773 47.826 0.00 0.00 0.00 3.41
1101 1158 1.201647 CTGCCTGCAACAAATCCTCAG 59.798 52.381 0.00 0.00 0.00 3.35
1109 1166 3.094572 CAACAAATCCTCAGCCCATTCT 58.905 45.455 0.00 0.00 0.00 2.40
1117 1174 4.473520 AGCCCATTCTCGCCACCG 62.474 66.667 0.00 0.00 0.00 4.94
1161 1218 0.811281 CAATGGCGACTTTCCCCTTC 59.189 55.000 0.00 0.00 0.00 3.46
1173 1230 3.072468 CCCTTCGACCCTACGCCA 61.072 66.667 0.00 0.00 0.00 5.69
1238 1295 3.035576 CTCGCGCTCGTGTGGTCTA 62.036 63.158 5.56 0.00 36.96 2.59
1242 1299 1.878522 CGCTCGTGTGGTCTATGGC 60.879 63.158 0.00 0.00 0.00 4.40
1248 1305 1.593006 CGTGTGGTCTATGGCGATTTC 59.407 52.381 0.00 0.00 0.00 2.17
1253 1310 1.068741 GGTCTATGGCGATTTCTCGGT 59.931 52.381 0.00 0.00 45.15 4.69
1254 1311 2.295349 GGTCTATGGCGATTTCTCGGTA 59.705 50.000 0.00 0.00 45.15 4.02
1256 1313 2.030185 TCTATGGCGATTTCTCGGTAGC 60.030 50.000 0.00 0.00 45.15 3.58
1287 1344 2.605823 CCTGGCGATCGTCACTATTCTC 60.606 54.545 20.25 0.00 0.00 2.87
1289 1346 1.336056 GGCGATCGTCACTATTCTCCC 60.336 57.143 16.20 0.00 0.00 4.30
1347 1404 7.066404 GTCAGAGATGTTTTAGGGGATTTTCTC 59.934 40.741 0.00 0.00 0.00 2.87
1350 1407 6.427441 AGATGTTTTAGGGGATTTTCTCTCC 58.573 40.000 0.00 0.00 46.10 3.71
1374 1431 1.021202 TCAAGCGTGTGGGTTTCAAG 58.979 50.000 0.00 0.00 33.12 3.02
1377 1434 0.180406 AGCGTGTGGGTTTCAAGTCT 59.820 50.000 0.00 0.00 0.00 3.24
1383 1440 3.751698 GTGTGGGTTTCAAGTCTATCACC 59.248 47.826 0.00 0.00 0.00 4.02
1404 1461 0.033920 CTTGTCCTTTTGGCCAAGCC 59.966 55.000 19.48 6.63 46.62 4.35
1458 1515 0.546122 TGCTTGTTGACAGTGGTCCT 59.454 50.000 0.00 0.00 43.65 3.85
1461 1518 2.811873 GCTTGTTGACAGTGGTCCTCAT 60.812 50.000 0.00 0.00 43.65 2.90
1464 1521 2.567169 TGTTGACAGTGGTCCTCATAGG 59.433 50.000 0.00 0.00 43.65 2.57
1482 1539 7.710044 CCTCATAGGCATGATGATATTCACTAC 59.290 40.741 0.00 0.00 40.40 2.73
1485 1542 5.233225 AGGCATGATGATATTCACTACGTG 58.767 41.667 0.00 0.00 34.45 4.49
1486 1543 4.143030 GGCATGATGATATTCACTACGTGC 60.143 45.833 0.00 0.00 38.39 5.34
1488 1545 5.164012 GCATGATGATATTCACTACGTGCTC 60.164 44.000 0.00 0.00 37.34 4.26
1491 1548 4.307443 TGATATTCACTACGTGCTCCAG 57.693 45.455 0.00 0.00 32.98 3.86
1506 1563 3.634397 CTCCAGAAGCATAACCAAGGA 57.366 47.619 0.00 0.00 0.00 3.36
1552 1609 1.834263 ACAGGGAGGTATGTCTTCTGC 59.166 52.381 0.00 0.00 0.00 4.26
1554 1611 2.503356 CAGGGAGGTATGTCTTCTGCTT 59.497 50.000 0.00 0.00 0.00 3.91
1569 1626 1.007387 GCTTGTGGGTTTTCCTGCG 60.007 57.895 0.00 0.00 40.46 5.18
1576 1633 1.095600 GGGTTTTCCTGCGGATCTTC 58.904 55.000 0.00 0.00 40.46 2.87
1578 1635 1.439679 GTTTTCCTGCGGATCTTCGT 58.560 50.000 0.00 0.00 0.00 3.85
1587 1644 3.591023 TGCGGATCTTCGTTGTATTCAA 58.409 40.909 0.00 0.00 0.00 2.69
1596 1653 6.688578 TCTTCGTTGTATTCAAGAGTTAGCT 58.311 36.000 0.00 0.00 33.97 3.32
1601 1658 9.431887 TCGTTGTATTCAAGAGTTAGCTAATTT 57.568 29.630 9.88 1.10 33.97 1.82
1617 1674 4.925646 GCTAATTTTGTGAGAAGCTTTGGG 59.074 41.667 0.00 0.00 0.00 4.12
1629 1686 3.064900 AGCTTTGGGAAGATGTCTGTC 57.935 47.619 0.00 0.00 34.71 3.51
1638 1695 3.323403 GGAAGATGTCTGTCTGGGATAGG 59.677 52.174 0.00 0.00 0.00 2.57
1647 1704 5.367060 GTCTGTCTGGGATAGGGTTAAATCT 59.633 44.000 0.00 0.00 0.00 2.40
1672 1729 9.362539 CTTCTGATGCAGCAGTTTTAATTAAAT 57.637 29.630 29.56 0.00 37.20 1.40
1716 1773 0.322456 TACCTGCCAGCATTGTGGTC 60.322 55.000 4.71 2.11 40.09 4.02
1719 1776 0.322277 CTGCCAGCATTGTGGTCTCT 60.322 55.000 0.00 0.00 40.09 3.10
1728 1785 3.188048 GCATTGTGGTCTCTTCTGACAAG 59.812 47.826 0.00 0.00 38.61 3.16
1743 1800 2.308866 TGACAAGAAGGAAGGGGAATCC 59.691 50.000 0.00 0.00 37.22 3.01
1754 1811 0.914417 GGGGAATCCTGGACCTGTCA 60.914 60.000 0.00 0.00 0.00 3.58
1759 1816 0.914644 ATCCTGGACCTGTCATGTGG 59.085 55.000 0.00 0.00 0.00 4.17
1803 1860 0.618968 GAGAGGGCCCTCCAGAAGAA 60.619 60.000 42.54 0.00 43.70 2.52
1808 1865 1.207791 GGCCCTCCAGAAGAAGATCA 58.792 55.000 0.00 0.00 0.00 2.92
1824 1881 6.540995 AGAAGATCATATTCCTGTTGATGGG 58.459 40.000 0.00 0.00 30.48 4.00
1851 1908 1.213678 CATCCCAGGCCTGATGAAGAA 59.786 52.381 34.91 10.83 40.64 2.52
1857 1914 1.637553 AGGCCTGATGAAGAACACCAT 59.362 47.619 3.11 0.00 0.00 3.55
1860 1917 2.421424 GCCTGATGAAGAACACCATCAC 59.579 50.000 0.00 0.00 42.76 3.06
1876 1933 6.050432 CACCATCACCCAAATCAAAATATGG 58.950 40.000 0.00 0.00 37.85 2.74
1884 1941 8.046107 CACCCAAATCAAAATATGGTTATTGGT 58.954 33.333 0.00 0.00 30.85 3.67
1916 1973 6.009589 TGGATGTTCATAACCACAATCAAGT 58.990 36.000 0.00 0.00 0.00 3.16
1981 2038 7.549615 CAGGATGCTATGTATGTGGAATATG 57.450 40.000 0.00 0.00 0.00 1.78
2019 2076 1.275856 GCCATGCCAAATGAGGAACAA 59.724 47.619 0.00 0.00 0.00 2.83
2022 2079 3.007182 CCATGCCAAATGAGGAACAACTT 59.993 43.478 0.00 0.00 0.00 2.66
2023 2080 4.220382 CCATGCCAAATGAGGAACAACTTA 59.780 41.667 0.00 0.00 0.00 2.24
2025 2082 6.096705 CCATGCCAAATGAGGAACAACTTATA 59.903 38.462 0.00 0.00 0.00 0.98
2028 2085 6.374333 TGCCAAATGAGGAACAACTTATAGAC 59.626 38.462 0.00 0.00 0.00 2.59
2058 2115 2.029623 CATGCAGGGGAATTCCTTGAG 58.970 52.381 23.63 12.33 44.61 3.02
2070 2127 7.287696 GGGGAATTCCTTGAGCTTAATGATTTA 59.712 37.037 23.63 0.00 35.95 1.40
2076 2133 6.658816 TCCTTGAGCTTAATGATTTACTTGCA 59.341 34.615 0.00 0.00 0.00 4.08
2084 2141 7.517614 TTAATGATTTACTTGCACCAGTCAA 57.482 32.000 0.00 0.00 0.00 3.18
2093 2150 4.037208 ACTTGCACCAGTCAATGAAGAAAG 59.963 41.667 0.00 0.00 0.00 2.62
2102 2159 3.501445 GTCAATGAAGAAAGTCAGCTGCT 59.499 43.478 9.47 6.85 0.00 4.24
2109 2166 0.666913 AAAGTCAGCTGCTGCAACAG 59.333 50.000 24.38 12.87 42.74 3.16
2111 2168 1.598962 GTCAGCTGCTGCAACAGGA 60.599 57.895 24.38 5.68 42.74 3.86
2113 2170 0.675837 TCAGCTGCTGCAACAGGATC 60.676 55.000 24.38 2.41 42.74 3.36
2114 2171 1.378250 AGCTGCTGCAACAGGATCC 60.378 57.895 18.36 2.48 42.74 3.36
2126 2183 1.643286 ACAGGATCCTGAGGAGAGTGA 59.357 52.381 41.91 0.00 46.30 3.41
2127 2184 2.031120 CAGGATCCTGAGGAGAGTGAC 58.969 57.143 34.54 0.00 46.30 3.67
2139 2196 7.069331 CCTGAGGAGAGTGACATAACTTTATCT 59.931 40.741 0.00 0.00 0.00 1.98
2149 2206 9.979270 GTGACATAACTTTATCTCTGAACAATG 57.021 33.333 0.00 0.00 0.00 2.82
2174 2231 5.762045 TGCTAGTTCTGCAGAATTTTTCAC 58.238 37.500 30.65 17.30 36.33 3.18
2175 2232 5.532406 TGCTAGTTCTGCAGAATTTTTCACT 59.468 36.000 30.65 22.95 36.33 3.41
2187 2247 5.185828 AGAATTTTTCACTAATGGTCCTGCC 59.814 40.000 0.00 0.00 37.90 4.85
2199 2259 2.240921 TGGTCCTGCCAATGTTATAGCA 59.759 45.455 0.00 0.00 45.94 3.49
2218 2278 0.548510 AGATCTGCTGGCCCCTTTAC 59.451 55.000 0.00 0.00 0.00 2.01
2221 2281 1.133809 TCTGCTGGCCCCTTTACAGT 61.134 55.000 0.00 0.00 34.79 3.55
2232 2292 3.010138 CCCCTTTACAGTTGAATCTCCCA 59.990 47.826 0.00 0.00 0.00 4.37
2241 2301 5.474876 ACAGTTGAATCTCCCAGATTTGAAC 59.525 40.000 0.37 6.97 44.41 3.18
2246 2306 2.348472 TCTCCCAGATTTGAACCTGGT 58.652 47.619 3.52 0.00 46.47 4.00
2262 2322 0.478072 TGGTTGTGCAGGTTCAGGAT 59.522 50.000 0.00 0.00 0.00 3.24
2263 2323 1.702401 TGGTTGTGCAGGTTCAGGATA 59.298 47.619 0.00 0.00 0.00 2.59
2267 2327 3.281727 TGTGCAGGTTCAGGATATTCC 57.718 47.619 0.00 0.00 36.58 3.01
2286 2346 9.071276 GATATTCCTTTTGATCCTATTGCTGAA 57.929 33.333 0.00 0.00 0.00 3.02
2292 2352 7.554118 CCTTTTGATCCTATTGCTGAAGAAGTA 59.446 37.037 0.00 0.00 0.00 2.24
2298 2358 7.667575 TCCTATTGCTGAAGAAGTAAGAGAT 57.332 36.000 0.28 0.00 40.96 2.75
2300 2360 7.343057 TCCTATTGCTGAAGAAGTAAGAGATCA 59.657 37.037 0.00 0.00 40.96 2.92
2302 2362 7.789273 ATTGCTGAAGAAGTAAGAGATCATG 57.211 36.000 0.00 0.00 33.67 3.07
2315 2375 5.171339 AGAGATCATGTGCCAGTTTTAGT 57.829 39.130 0.00 0.00 0.00 2.24
2316 2376 5.564550 AGAGATCATGTGCCAGTTTTAGTT 58.435 37.500 0.00 0.00 0.00 2.24
2321 2381 4.642437 TCATGTGCCAGTTTTAGTTCAACA 59.358 37.500 0.00 0.00 0.00 3.33
2323 2383 6.488344 TCATGTGCCAGTTTTAGTTCAACATA 59.512 34.615 0.00 0.00 0.00 2.29
2325 2385 7.987750 TGTGCCAGTTTTAGTTCAACATATA 57.012 32.000 0.00 0.00 0.00 0.86
2327 2387 7.445707 TGTGCCAGTTTTAGTTCAACATATACA 59.554 33.333 0.00 0.00 0.00 2.29
2328 2388 8.293867 GTGCCAGTTTTAGTTCAACATATACAA 58.706 33.333 0.00 0.00 0.00 2.41
2368 2428 4.946445 ACATGTGAATGTTGATGTTGCAA 58.054 34.783 0.00 0.00 0.00 4.08
2372 2432 4.211584 TGTGAATGTTGATGTTGCAATTGC 59.788 37.500 23.69 23.69 42.50 3.56
2373 2433 4.449743 GTGAATGTTGATGTTGCAATTGCT 59.550 37.500 29.37 10.85 42.66 3.91
2378 2438 1.962100 TGATGTTGCAATTGCTCCACA 59.038 42.857 29.37 26.13 42.66 4.17
2381 2441 1.755959 TGTTGCAATTGCTCCACAAGT 59.244 42.857 29.37 0.00 42.87 3.16
2382 2442 2.223782 TGTTGCAATTGCTCCACAAGTC 60.224 45.455 29.37 6.55 42.87 3.01
2393 2453 2.559668 CTCCACAAGTCCATGTTGCAAT 59.440 45.455 0.59 0.00 0.00 3.56
2394 2454 2.964464 TCCACAAGTCCATGTTGCAATT 59.036 40.909 0.59 0.00 0.00 2.32
2399 2459 5.293814 CACAAGTCCATGTTGCAATTGAAAA 59.706 36.000 10.34 0.00 0.00 2.29
2402 2462 5.613329 AGTCCATGTTGCAATTGAAAATGT 58.387 33.333 10.34 0.00 0.00 2.71
2413 2473 6.366604 TGCAATTGAAAATGTAGATGTTGCAG 59.633 34.615 10.34 0.00 42.83 4.41
2414 2474 6.366877 GCAATTGAAAATGTAGATGTTGCAGT 59.633 34.615 10.34 0.00 39.22 4.40
2415 2475 7.620600 GCAATTGAAAATGTAGATGTTGCAGTG 60.621 37.037 10.34 0.00 39.22 3.66
2417 2477 3.855689 AAATGTAGATGTTGCAGTGGC 57.144 42.857 0.00 0.00 41.68 5.01
2422 2482 0.403271 AGATGTTGCAGTGGCTCCTT 59.597 50.000 0.00 0.00 41.91 3.36
2424 2484 0.111061 ATGTTGCAGTGGCTCCTTCA 59.889 50.000 0.00 0.00 41.91 3.02
2425 2485 0.535780 TGTTGCAGTGGCTCCTTCAG 60.536 55.000 0.00 0.00 41.91 3.02
2426 2486 0.250467 GTTGCAGTGGCTCCTTCAGA 60.250 55.000 0.00 0.00 41.91 3.27
2428 2488 0.035725 TGCAGTGGCTCCTTCAGATG 60.036 55.000 0.00 0.00 41.91 2.90
2442 2502 4.687483 CCTTCAGATGTTGCAATTCCAAAC 59.313 41.667 0.59 0.00 0.00 2.93
2443 2503 4.933505 TCAGATGTTGCAATTCCAAACA 57.066 36.364 0.59 0.00 0.00 2.83
2446 2506 3.642848 AGATGTTGCAATTCCAAACACCT 59.357 39.130 0.59 0.00 0.00 4.00
2450 2510 4.633565 TGTTGCAATTCCAAACACCTTTTC 59.366 37.500 0.59 0.00 0.00 2.29
2454 2514 5.104982 TGCAATTCCAAACACCTTTTCTTCT 60.105 36.000 0.00 0.00 0.00 2.85
2456 2516 6.683861 GCAATTCCAAACACCTTTTCTTCTCT 60.684 38.462 0.00 0.00 0.00 3.10
2459 2519 5.063880 TCCAAACACCTTTTCTTCTCTAGC 58.936 41.667 0.00 0.00 0.00 3.42
2466 2526 4.466015 ACCTTTTCTTCTCTAGCTCAGGAG 59.534 45.833 0.00 0.00 0.00 3.69
2473 2533 2.031120 CTCTAGCTCAGGAGGTTGAGG 58.969 57.143 23.22 11.11 46.94 3.86
2480 2540 1.429299 TCAGGAGGTTGAGGTCTCAGA 59.571 52.381 0.75 0.00 41.13 3.27
2482 2542 0.534873 GGAGGTTGAGGTCTCAGAGC 59.465 60.000 0.00 0.00 41.13 4.09
2485 2545 1.899142 AGGTTGAGGTCTCAGAGCTTC 59.101 52.381 8.06 2.30 40.67 3.86
2487 2547 2.037772 GGTTGAGGTCTCAGAGCTTCAA 59.962 50.000 8.06 10.63 40.67 2.69
2489 2549 2.603021 TGAGGTCTCAGAGCTTCAACT 58.397 47.619 8.06 0.00 40.67 3.16
2493 2553 3.135530 AGGTCTCAGAGCTTCAACTTGTT 59.864 43.478 0.00 0.00 37.04 2.83
2494 2554 3.249559 GGTCTCAGAGCTTCAACTTGTTG 59.750 47.826 7.13 7.13 0.00 3.33
2495 2555 2.874701 TCTCAGAGCTTCAACTTGTTGC 59.125 45.455 8.48 0.00 0.00 4.17
2496 2556 2.877168 CTCAGAGCTTCAACTTGTTGCT 59.123 45.455 8.48 9.76 36.63 3.91
2497 2557 3.282021 TCAGAGCTTCAACTTGTTGCTT 58.718 40.909 8.48 0.00 33.83 3.91
2498 2558 3.696051 TCAGAGCTTCAACTTGTTGCTTT 59.304 39.130 8.48 5.04 33.83 3.51
2499 2559 3.795101 CAGAGCTTCAACTTGTTGCTTTG 59.205 43.478 8.48 11.21 33.83 2.77
2500 2560 3.445096 AGAGCTTCAACTTGTTGCTTTGT 59.555 39.130 8.48 0.00 33.83 2.83
2501 2561 4.082026 AGAGCTTCAACTTGTTGCTTTGTT 60.082 37.500 8.48 0.00 33.83 2.83
2502 2562 3.928375 AGCTTCAACTTGTTGCTTTGTTG 59.072 39.130 8.48 0.00 40.53 3.33
2503 2563 3.925913 GCTTCAACTTGTTGCTTTGTTGA 59.074 39.130 8.48 0.00 44.41 3.18
2504 2564 4.032104 GCTTCAACTTGTTGCTTTGTTGAG 59.968 41.667 8.48 0.00 45.88 3.02
2505 2565 4.108699 TCAACTTGTTGCTTTGTTGAGG 57.891 40.909 8.48 0.00 42.25 3.86
2506 2566 2.584492 ACTTGTTGCTTTGTTGAGGC 57.416 45.000 0.00 0.00 0.00 4.70
2507 2567 1.136891 ACTTGTTGCTTTGTTGAGGCC 59.863 47.619 0.00 0.00 0.00 5.19
2508 2568 1.410153 CTTGTTGCTTTGTTGAGGCCT 59.590 47.619 3.86 3.86 0.00 5.19
2509 2569 0.746063 TGTTGCTTTGTTGAGGCCTG 59.254 50.000 12.00 0.00 0.00 4.85
2510 2570 1.032014 GTTGCTTTGTTGAGGCCTGA 58.968 50.000 12.00 0.00 0.00 3.86
2511 2571 1.032014 TTGCTTTGTTGAGGCCTGAC 58.968 50.000 12.00 9.79 0.00 3.51
2512 2572 0.106769 TGCTTTGTTGAGGCCTGACA 60.107 50.000 12.00 12.81 0.00 3.58
2517 2577 0.321671 TGTTGAGGCCTGACACTAGC 59.678 55.000 12.00 0.00 0.00 3.42
2523 2583 0.036875 GGCCTGACACTAGCCAACTT 59.963 55.000 0.00 0.00 46.34 2.66
2527 2587 3.265791 CCTGACACTAGCCAACTTGATC 58.734 50.000 0.00 0.00 0.00 2.92
2531 2591 2.906389 ACACTAGCCAACTTGATCTCCA 59.094 45.455 0.00 0.00 0.00 3.86
2535 2595 1.284198 AGCCAACTTGATCTCCATGCT 59.716 47.619 0.00 0.00 0.00 3.79
2540 2600 5.128205 CCAACTTGATCTCCATGCTATTGA 58.872 41.667 0.00 0.00 0.00 2.57
2542 2602 6.938596 CCAACTTGATCTCCATGCTATTGATA 59.061 38.462 0.00 0.00 0.00 2.15
2543 2603 7.446319 CCAACTTGATCTCCATGCTATTGATAA 59.554 37.037 0.00 0.00 0.00 1.75
2546 2606 8.162085 ACTTGATCTCCATGCTATTGATAATGT 58.838 33.333 0.00 0.00 0.00 2.71
2559 2619 5.581126 TTGATAATGTCAACAATCCTGCC 57.419 39.130 0.00 0.00 41.79 4.85
2562 2622 3.947910 AATGTCAACAATCCTGCCTTG 57.052 42.857 0.00 0.00 0.00 3.61
2564 2624 0.244721 GTCAACAATCCTGCCTTGCC 59.755 55.000 0.00 0.00 0.00 4.52
2565 2625 0.178967 TCAACAATCCTGCCTTGCCA 60.179 50.000 0.00 0.00 0.00 4.92
2569 2629 1.681327 AATCCTGCCTTGCCAGCTG 60.681 57.895 6.78 6.78 0.00 4.24
2573 2633 4.274008 TGCCTTGCCAGCTGCTGA 62.274 61.111 30.10 9.18 42.00 4.26
2576 2636 1.807886 CCTTGCCAGCTGCTGATTC 59.192 57.895 30.10 17.98 42.00 2.52
2578 2638 1.407851 CCTTGCCAGCTGCTGATTCTA 60.408 52.381 30.10 13.97 42.00 2.10
2584 2644 3.196463 CCAGCTGCTGATTCTACAGAAG 58.804 50.000 30.10 5.52 44.12 2.85
2589 2649 4.695396 CTGCTGATTCTACAGAAGCTCAT 58.305 43.478 8.54 0.00 40.76 2.90
2591 2651 4.161001 TGCTGATTCTACAGAAGCTCATGA 59.839 41.667 8.54 0.00 40.76 3.07
2595 2655 4.727507 TTCTACAGAAGCTCATGACTCC 57.272 45.455 5.21 0.00 0.00 3.85
2605 2665 1.480137 CTCATGACTCCCAGACTGGTC 59.520 57.143 20.24 11.69 35.17 4.02
2607 2667 1.905215 CATGACTCCCAGACTGGTCTT 59.095 52.381 20.24 6.92 37.98 3.01
2613 2673 3.165875 CTCCCAGACTGGTCTTCACTTA 58.834 50.000 20.24 0.00 37.98 2.24
2615 2675 2.900546 CCCAGACTGGTCTTCACTTACT 59.099 50.000 20.24 0.00 37.98 2.24
2619 2679 5.453339 CCAGACTGGTCTTCACTTACTTGAA 60.453 44.000 13.84 0.00 37.98 2.69
2620 2680 5.463724 CAGACTGGTCTTCACTTACTTGAAC 59.536 44.000 0.00 0.00 37.98 3.18
2621 2681 5.128827 AGACTGGTCTTCACTTACTTGAACA 59.871 40.000 0.00 0.00 36.31 3.18
2625 2685 4.757149 GGTCTTCACTTACTTGAACATGCT 59.243 41.667 0.00 0.00 32.02 3.79
2633 2693 0.170561 CTTGAACATGCTCAGCCTGC 59.829 55.000 1.18 0.00 0.00 4.85
2644 2707 1.470098 CTCAGCCTGCAACATTGGTAC 59.530 52.381 0.00 0.00 0.00 3.34
2661 2724 2.421424 GGTACCTTTTGATGCTCAGCAG 59.579 50.000 5.13 0.00 43.65 4.24
2676 2739 0.831966 AGCAGGAGCAGATTCTGGAG 59.168 55.000 15.28 0.00 45.49 3.86
2683 2746 1.064611 AGCAGATTCTGGAGCAGCATT 60.065 47.619 15.28 0.00 31.21 3.56
2687 2750 3.808726 CAGATTCTGGAGCAGCATTCTAC 59.191 47.826 5.73 0.00 0.00 2.59
2694 2757 2.935201 GGAGCAGCATTCTACTTCTGTG 59.065 50.000 0.00 0.00 0.00 3.66
2697 2760 3.750130 AGCAGCATTCTACTTCTGTGTTG 59.250 43.478 0.00 0.00 0.00 3.33
2704 2767 6.634436 GCATTCTACTTCTGTGTTGAACAAAG 59.366 38.462 9.23 9.23 38.67 2.77
2705 2768 7.679638 GCATTCTACTTCTGTGTTGAACAAAGT 60.680 37.037 14.70 15.19 40.30 2.66
2725 2788 5.473066 AGTTGTGGCTTTGCAAGAATTAT 57.527 34.783 0.00 0.00 0.00 1.28
2729 2792 6.832520 TGTGGCTTTGCAAGAATTATCTAA 57.167 33.333 0.00 0.00 33.77 2.10
2739 2803 6.599244 TGCAAGAATTATCTAACCTGGTCAAG 59.401 38.462 0.00 0.91 33.77 3.02
2740 2804 6.823689 GCAAGAATTATCTAACCTGGTCAAGA 59.176 38.462 12.62 12.62 33.77 3.02
2742 2806 9.050601 CAAGAATTATCTAACCTGGTCAAGATC 57.949 37.037 21.43 12.36 33.77 2.75
2744 2808 5.888982 TTATCTAACCTGGTCAAGATCCC 57.111 43.478 21.43 0.00 31.38 3.85
2746 2810 3.526899 TCTAACCTGGTCAAGATCCCAA 58.473 45.455 0.00 0.00 0.00 4.12
2747 2811 4.111577 TCTAACCTGGTCAAGATCCCAAT 58.888 43.478 0.00 0.00 0.00 3.16
2750 2814 4.946160 ACCTGGTCAAGATCCCAATTTA 57.054 40.909 0.00 0.00 0.00 1.40
2753 2817 5.491078 ACCTGGTCAAGATCCCAATTTACTA 59.509 40.000 0.00 0.00 0.00 1.82
2757 2821 6.184789 GGTCAAGATCCCAATTTACTACCAA 58.815 40.000 0.00 0.00 0.00 3.67
2758 2822 6.661805 GGTCAAGATCCCAATTTACTACCAAA 59.338 38.462 0.00 0.00 0.00 3.28
2778 2842 5.189934 CCAAAAGGATCAAGGTACTACTCCT 59.810 44.000 0.00 0.00 40.81 3.69
2784 2848 4.048970 TCAAGGTACTACTCCTTCTGCT 57.951 45.455 0.00 0.00 42.57 4.24
2799 2863 1.151810 TGCTCCTCCTGGTTTCCCT 60.152 57.895 0.00 0.00 34.23 4.20
2817 2881 4.260477 TCCCTCTCCCTATCTATCAAGGA 58.740 47.826 0.00 0.00 34.58 3.36
2818 2882 4.675065 TCCCTCTCCCTATCTATCAAGGAA 59.325 45.833 0.00 0.00 34.58 3.36
2820 2884 6.512896 TCCCTCTCCCTATCTATCAAGGAATA 59.487 42.308 0.00 0.00 34.58 1.75
2823 2887 7.341769 CCTCTCCCTATCTATCAAGGAATACAG 59.658 44.444 0.00 0.00 34.58 2.74
2841 2905 9.778741 GGAATACAGAATAATATCACAGTTGGA 57.221 33.333 0.00 0.00 0.00 3.53
2844 2908 6.653020 ACAGAATAATATCACAGTTGGAGCA 58.347 36.000 0.00 0.00 0.00 4.26
2858 2922 4.060205 GTTGGAGCAATGCAATTTCTGTT 58.940 39.130 8.35 0.00 31.22 3.16
2868 2932 5.710513 TGCAATTTCTGTTTGATGTAGCT 57.289 34.783 0.00 0.00 0.00 3.32
2907 2971 2.502142 TGCTGCCTGATTTGACTGAT 57.498 45.000 0.00 0.00 0.00 2.90
2925 2989 8.777865 TGACTGATTCACAAATCTTAGGTAAG 57.222 34.615 0.41 0.00 41.63 2.34
2946 3010 4.501433 AGGAAGGAGCATCTATCTGGAAT 58.499 43.478 0.00 0.00 33.73 3.01
2952 3016 5.480073 AGGAGCATCTATCTGGAATACTCAC 59.520 44.000 0.00 0.00 33.73 3.51
2961 3025 3.327757 TCTGGAATACTCACTTTGCACCT 59.672 43.478 0.00 0.00 0.00 4.00
2966 3030 2.736670 ACTCACTTTGCACCTTCCTT 57.263 45.000 0.00 0.00 0.00 3.36
2971 3035 3.135712 TCACTTTGCACCTTCCTTAGACA 59.864 43.478 0.00 0.00 0.00 3.41
3021 3085 5.660864 TGAATGGACAAACTTTCTTTCCCTT 59.339 36.000 0.00 0.00 0.00 3.95
3024 3088 3.384789 GGACAAACTTTCTTTCCCTTGCT 59.615 43.478 0.00 0.00 0.00 3.91
3039 3103 0.037303 TTGCTTTGCTCTCCCCTGAG 59.963 55.000 0.00 0.00 40.17 3.35
3050 3114 4.080863 GCTCTCCCCTGAGAAATTTGAGTA 60.081 45.833 0.00 0.00 46.75 2.59
3060 3124 6.061441 TGAGAAATTTGAGTAGGCAAAGTCA 58.939 36.000 0.00 0.00 40.68 3.41
3066 3130 2.897326 TGAGTAGGCAAAGTCACTGCTA 59.103 45.455 0.00 0.00 39.82 3.49
3075 3139 4.214119 GCAAAGTCACTGCTATCTTCACAA 59.786 41.667 0.00 0.00 36.84 3.33
3102 3166 5.853936 TGGACATATATTCTGGAAGGTTCG 58.146 41.667 0.00 0.00 0.00 3.95
3104 3168 5.228945 ACATATATTCTGGAAGGTTCGGG 57.771 43.478 0.00 0.00 0.00 5.14
3111 3175 3.716431 TCTGGAAGGTTCGGGTAGTAAT 58.284 45.455 0.00 0.00 0.00 1.89
3160 3224 2.156098 TGTTCTTCTGCCCAGGCCT 61.156 57.895 0.00 0.00 41.09 5.19
3185 3249 3.254629 GCAAGATGCAGGTTCTGGA 57.745 52.632 0.00 0.00 44.26 3.86
3191 3255 0.403271 ATGCAGGTTCTGGAAGCAGT 59.597 50.000 13.73 0.00 40.96 4.40
3192 3256 0.183492 TGCAGGTTCTGGAAGCAGTT 59.817 50.000 13.73 0.00 40.96 3.16
3201 3265 0.603707 TGGAAGCAGTTGAGGAAGCG 60.604 55.000 0.00 0.00 0.00 4.68
3216 3280 2.421314 GCGCCCAAGCTGGTTTTT 59.579 55.556 0.00 0.00 35.17 1.94
3238 3302 7.660030 TTTTCCACTCCTCAAGAAAAGAAAT 57.340 32.000 0.00 0.00 34.27 2.17
3244 3308 6.149142 CACTCCTCAAGAAAAGAAATCCTCTG 59.851 42.308 0.00 0.00 33.37 3.35
3245 3309 5.006386 TCCTCAAGAAAAGAAATCCTCTGC 58.994 41.667 0.00 0.00 33.37 4.26
3247 3311 5.242393 CCTCAAGAAAAGAAATCCTCTGCAA 59.758 40.000 0.00 0.00 33.37 4.08
3255 3319 2.486472 AATCCTCTGCAACTGTGGAG 57.514 50.000 2.29 0.00 44.23 3.86
3278 3342 3.815401 GTGCAACCTTCAAGTACATCTGT 59.185 43.478 0.00 0.00 0.00 3.41
3302 3366 2.093288 TGCATGCTAACAGGAAGAGGAG 60.093 50.000 20.33 0.00 0.00 3.69
3303 3367 2.744494 GCATGCTAACAGGAAGAGGAGG 60.744 54.545 11.37 0.00 0.00 4.30
3324 3388 2.820197 GGAAAAGTTACCCTTGGCAGAG 59.180 50.000 0.00 0.00 32.32 3.35
3341 3405 3.702792 CAGAGTCTGAGGTAAGGAGGAA 58.297 50.000 15.46 0.00 32.44 3.36
3351 3415 6.418101 TGAGGTAAGGAGGAATGAAAGATTG 58.582 40.000 0.00 0.00 0.00 2.67
3354 3418 5.418840 GGTAAGGAGGAATGAAAGATTGCAA 59.581 40.000 0.00 0.00 0.00 4.08
3396 3460 7.108847 ACAAGAGAAATCTTTGTCTGGATAGG 58.891 38.462 10.31 0.00 39.55 2.57
3408 3472 4.263905 TGTCTGGATAGGAATTGTTTGCCT 60.264 41.667 0.00 0.00 35.82 4.75
3413 3477 5.652014 TGGATAGGAATTGTTTGCCTTGTAG 59.348 40.000 0.00 0.00 33.28 2.74
3456 3520 7.202016 TGCTAATAAAGTGGTCAGAAACTTG 57.798 36.000 1.36 0.00 36.75 3.16
3480 3544 3.181476 GCTCCTCCTTTTGCAAAACTCAA 60.181 43.478 20.46 0.11 0.00 3.02
3496 3560 5.921962 AACTCAAGAATTTAATGGCCCTC 57.078 39.130 0.00 0.00 0.00 4.30
3558 3622 1.002011 GGAGCCCACAAAGAGGTCC 60.002 63.158 0.00 0.00 40.64 4.46
3570 3634 0.793617 AGAGGTCCCAGAGGAAAGGA 59.206 55.000 0.00 0.00 46.38 3.36
3577 3641 1.362224 CCAGAGGAAAGGACCAGGAA 58.638 55.000 0.00 0.00 0.00 3.36
3579 3643 1.981495 CAGAGGAAAGGACCAGGAACT 59.019 52.381 0.00 0.00 43.88 3.01
3598 3663 3.445008 ACTGAGGAGAAGCATAGTTGGA 58.555 45.455 0.00 0.00 0.00 3.53
3602 3667 5.431765 TGAGGAGAAGCATAGTTGGATTTC 58.568 41.667 0.00 0.00 0.00 2.17
3633 3698 9.682465 TCTGCAAGATACTAGTAGAAAGACTAA 57.318 33.333 8.85 0.00 38.67 2.24
3671 3737 6.889301 AATGATGCACTTTATATGTCCTGG 57.111 37.500 0.00 0.00 0.00 4.45
3675 3741 3.780294 TGCACTTTATATGTCCTGGACCT 59.220 43.478 23.42 16.42 0.00 3.85
3676 3742 4.227300 TGCACTTTATATGTCCTGGACCTT 59.773 41.667 23.42 13.56 0.00 3.50
3687 3753 2.777692 TCCTGGACCTTCAGTTTCAGTT 59.222 45.455 0.00 0.00 33.14 3.16
3700 3766 4.445385 CAGTTTCAGTTTGTAATGCTTGCC 59.555 41.667 0.00 0.00 0.00 4.52
3706 3772 3.005791 AGTTTGTAATGCTTGCCTGAACC 59.994 43.478 0.00 0.00 0.00 3.62
3711 3777 2.887151 ATGCTTGCCTGAACCTAGTT 57.113 45.000 0.00 0.00 0.00 2.24
3713 3779 2.504367 TGCTTGCCTGAACCTAGTTTC 58.496 47.619 0.00 0.00 0.00 2.78
3720 3786 3.403038 CCTGAACCTAGTTTCTGTGGTG 58.597 50.000 1.45 0.00 32.53 4.17
3721 3787 3.181454 CCTGAACCTAGTTTCTGTGGTGT 60.181 47.826 1.45 0.00 32.53 4.16
3723 3789 3.452990 TGAACCTAGTTTCTGTGGTGTCA 59.547 43.478 1.45 0.00 32.53 3.58
3730 3796 3.149196 GTTTCTGTGGTGTCATGGATGT 58.851 45.455 0.00 0.00 0.00 3.06
3740 3806 3.947196 GTGTCATGGATGTTGCCAGAATA 59.053 43.478 0.00 0.00 42.15 1.75
3744 3810 5.981315 GTCATGGATGTTGCCAGAATATTTG 59.019 40.000 0.00 0.00 42.15 2.32
3749 3815 5.163478 GGATGTTGCCAGAATATTTGAGCTT 60.163 40.000 0.00 0.00 0.00 3.74
3752 3818 6.523840 TGTTGCCAGAATATTTGAGCTTTTT 58.476 32.000 0.00 0.00 0.00 1.94
3759 3825 8.248945 CCAGAATATTTGAGCTTTTTCTGTGAT 58.751 33.333 12.43 0.00 38.78 3.06
3776 3843 6.804677 TCTGTGATTTTTACAAGTGCACAAT 58.195 32.000 21.04 7.85 34.80 2.71
3780 3847 6.701400 GTGATTTTTACAAGTGCACAATCCTT 59.299 34.615 21.04 0.24 0.00 3.36
3781 3848 6.700960 TGATTTTTACAAGTGCACAATCCTTG 59.299 34.615 21.04 16.19 41.02 3.61
3783 3850 6.403866 TTTTACAAGTGCACAATCCTTGAT 57.596 33.333 21.04 7.64 39.07 2.57
3789 3856 4.886579 AGTGCACAATCCTTGATTTTTCC 58.113 39.130 21.04 0.00 28.87 3.13
3804 3871 9.991906 CTTGATTTTTCCCATGCATAATAGAAT 57.008 29.630 0.00 0.00 0.00 2.40
3811 3878 7.288810 TCCCATGCATAATAGAATTTGGAAC 57.711 36.000 0.00 0.00 0.00 3.62
3814 3881 8.152246 CCCATGCATAATAGAATTTGGAACATT 58.848 33.333 0.00 0.00 39.30 2.71
3861 3928 1.985159 TGATCCTGCCAAGTGGTTAGT 59.015 47.619 0.00 0.00 37.57 2.24
3862 3929 2.027192 TGATCCTGCCAAGTGGTTAGTC 60.027 50.000 0.00 0.00 37.57 2.59
3879 3946 5.576774 GGTTAGTCATAGCCAACAAAATTGC 59.423 40.000 0.00 0.00 32.71 3.56
3884 3951 5.870978 GTCATAGCCAACAAAATTGCTGAAT 59.129 36.000 0.00 0.00 35.34 2.57
3957 4024 5.536161 ACAGCCAATACATCAGACACTTTTT 59.464 36.000 0.00 0.00 0.00 1.94
4006 4073 2.744062 CCCTTTTGTGGGTGCATCA 58.256 52.632 0.00 0.00 42.25 3.07
4009 4076 1.619654 CTTTTGTGGGTGCATCAGGA 58.380 50.000 0.00 0.00 0.00 3.86
4024 4091 4.592942 CATCAGGAGGTCTTTTCATTGGA 58.407 43.478 0.00 0.00 0.00 3.53
4036 4103 3.891422 TTCATTGGATGGAATGGCAAC 57.109 42.857 0.00 0.00 34.58 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.078516 AACGACGGTGGCCTAGGC 62.079 66.667 26.55 26.55 41.06 3.93
8 9 2.125673 CAACGACGGTGGCCTAGG 60.126 66.667 4.57 3.67 0.00 3.02
9 10 2.125673 CCAACGACGGTGGCCTAG 60.126 66.667 20.83 0.00 0.00 3.02
10 11 4.382320 GCCAACGACGGTGGCCTA 62.382 66.667 40.71 0.00 42.52 3.93
132 133 0.539438 AATCGCCCAAAGCAGACCAA 60.539 50.000 0.00 0.00 44.04 3.67
133 134 1.074775 AATCGCCCAAAGCAGACCA 59.925 52.632 0.00 0.00 44.04 4.02
134 135 1.508088 CAATCGCCCAAAGCAGACC 59.492 57.895 0.00 0.00 44.04 3.85
135 136 1.153958 GCAATCGCCCAAAGCAGAC 60.154 57.895 0.00 0.00 44.04 3.51
136 137 2.689785 CGCAATCGCCCAAAGCAGA 61.690 57.895 0.00 0.00 44.04 4.26
142 144 0.463474 TCATGATCGCAATCGCCCAA 60.463 50.000 0.00 0.00 34.39 4.12
185 227 1.205655 GGATTCAAAAGCCCTTCCAGC 59.794 52.381 0.00 0.00 0.00 4.85
196 238 8.733458 CACTGATTCTTGATGTAGGATTCAAAA 58.267 33.333 0.00 0.00 31.85 2.44
204 246 4.633126 CACCACACTGATTCTTGATGTAGG 59.367 45.833 0.00 0.00 0.00 3.18
205 247 5.240891 ACACCACACTGATTCTTGATGTAG 58.759 41.667 0.00 0.00 0.00 2.74
227 269 5.581085 ACGTAGCAATAGGATTGACTGAAAC 59.419 40.000 3.38 0.00 0.00 2.78
228 270 5.730550 ACGTAGCAATAGGATTGACTGAAA 58.269 37.500 3.38 0.00 0.00 2.69
230 272 4.401202 TGACGTAGCAATAGGATTGACTGA 59.599 41.667 3.38 0.00 0.00 3.41
233 275 4.383052 CGATGACGTAGCAATAGGATTGAC 59.617 45.833 3.38 0.00 34.56 3.18
235 277 3.121944 GCGATGACGTAGCAATAGGATTG 59.878 47.826 0.00 0.00 41.98 2.67
241 283 0.318360 CCGGCGATGACGTAGCAATA 60.318 55.000 9.30 0.00 41.98 1.90
242 284 1.591594 CCGGCGATGACGTAGCAAT 60.592 57.895 9.30 0.00 41.98 3.56
243 285 2.202690 CCGGCGATGACGTAGCAA 60.203 61.111 9.30 0.00 41.98 3.91
253 295 1.218316 GAAGAACCTGTCCGGCGAT 59.782 57.895 9.30 0.00 35.61 4.58
254 296 2.654877 GAAGAACCTGTCCGGCGA 59.345 61.111 9.30 0.00 35.61 5.54
255 297 2.434359 GGAAGAACCTGTCCGGCG 60.434 66.667 0.00 0.00 35.61 6.46
352 394 3.999663 AGACTTTGAAATCCGAAGCAGAG 59.000 43.478 0.00 0.00 39.43 3.35
361 403 8.186821 CCTTCAATATGTGAGACTTTGAAATCC 58.813 37.037 0.00 0.00 37.61 3.01
397 439 4.736793 GCACATGAAGAAACACAGAACTTG 59.263 41.667 0.00 0.00 0.00 3.16
426 468 3.181506 GCCACCGCAAACAATTTCAAAAA 60.182 39.130 0.00 0.00 34.03 1.94
440 482 1.227527 CCGAGATATTGCCACCGCA 60.228 57.895 0.00 0.00 45.49 5.69
442 484 1.000843 TGATCCGAGATATTGCCACCG 59.999 52.381 0.00 0.00 0.00 4.94
457 499 5.603170 AATCCATGGACAACAAATGATCC 57.397 39.130 18.99 0.00 32.82 3.36
496 538 3.060866 CGAAGATCCGGATCCCCC 58.939 66.667 35.53 24.18 38.58 5.40
504 546 2.476619 GTGTATGCAATCCGAAGATCCG 59.523 50.000 0.00 0.00 0.00 4.18
505 547 3.466836 TGTGTATGCAATCCGAAGATCC 58.533 45.455 0.00 0.00 0.00 3.36
523 565 3.119884 TGGCTGTGCGAAGATAATTTGTG 60.120 43.478 0.00 0.00 0.00 3.33
525 567 3.763097 TGGCTGTGCGAAGATAATTTG 57.237 42.857 0.00 0.00 0.00 2.32
526 568 4.989279 ATTGGCTGTGCGAAGATAATTT 57.011 36.364 0.00 0.00 28.65 1.82
541 583 3.962718 CCATTGTCCATTCCTAATTGGCT 59.037 43.478 0.00 0.00 35.26 4.75
560 602 3.610585 CGGTTGTTGTTGCGATTAACCAT 60.611 43.478 0.00 0.00 37.91 3.55
566 608 0.317770 CTGCGGTTGTTGTTGCGATT 60.318 50.000 0.00 0.00 0.00 3.34
596 638 6.809630 AAATCTAGGTTCTTGAGCAACTTC 57.190 37.500 0.00 0.00 0.00 3.01
629 671 2.352960 CCAAAGAACTCCGAATAGCTGC 59.647 50.000 0.00 0.00 0.00 5.25
630 672 2.939103 CCCAAAGAACTCCGAATAGCTG 59.061 50.000 0.00 0.00 0.00 4.24
632 674 2.937149 GACCCAAAGAACTCCGAATAGC 59.063 50.000 0.00 0.00 0.00 2.97
639 681 2.658807 AGTTGGACCCAAAGAACTCC 57.341 50.000 2.62 0.00 37.70 3.85
641 683 3.053619 ACTGAAGTTGGACCCAAAGAACT 60.054 43.478 2.62 0.00 37.70 3.01
646 688 2.685897 CGAAACTGAAGTTGGACCCAAA 59.314 45.455 2.62 0.00 38.44 3.28
648 690 1.476110 CCGAAACTGAAGTTGGACCCA 60.476 52.381 0.00 0.00 38.44 4.51
649 691 1.235724 CCGAAACTGAAGTTGGACCC 58.764 55.000 0.00 0.00 38.44 4.46
652 694 1.593196 CTGCCGAAACTGAAGTTGGA 58.407 50.000 0.00 0.00 38.44 3.53
708 750 1.143373 TCGAATTTGCGTCGATCCCG 61.143 55.000 0.00 0.00 42.31 5.14
743 785 2.632537 AGAAGAAGGCCCCTTAGACAA 58.367 47.619 0.00 0.00 36.26 3.18
745 787 5.131308 AGAATTAGAAGAAGGCCCCTTAGAC 59.869 44.000 0.00 0.00 36.26 2.59
757 799 4.441634 GCCGGCTGACTAGAATTAGAAGAA 60.442 45.833 22.15 0.00 0.00 2.52
769 811 3.399181 CCTTGGGCCGGCTGACTA 61.399 66.667 28.56 12.84 0.00 2.59
784 826 0.598065 GAACACAGAAAATGCGGCCT 59.402 50.000 0.00 0.00 0.00 5.19
787 829 0.591170 ACCGAACACAGAAAATGCGG 59.409 50.000 0.00 0.00 42.64 5.69
799 841 1.371267 CGAAGCGAGACACCGAACA 60.371 57.895 0.00 0.00 0.00 3.18
802 844 2.670592 TCCGAAGCGAGACACCGA 60.671 61.111 0.00 0.00 0.00 4.69
805 847 1.733399 GTGGTCCGAAGCGAGACAC 60.733 63.158 0.00 0.00 34.58 3.67
852 894 4.912395 TTTTGCAGGCCCGGCAGT 62.912 61.111 17.99 0.00 43.05 4.40
853 895 4.060038 CTTTTGCAGGCCCGGCAG 62.060 66.667 17.99 4.09 43.05 4.85
856 898 2.282462 AGTCTTTTGCAGGCCCGG 60.282 61.111 0.00 0.00 0.00 5.73
868 910 1.612726 GCAGAGATGTTGCCCAGTCTT 60.613 52.381 0.00 0.00 35.54 3.01
878 920 2.550830 AAACAGGACGCAGAGATGTT 57.449 45.000 0.00 0.00 35.70 2.71
902 944 4.440525 CCGTAGCGTTAACCCAGATTTAGA 60.441 45.833 0.00 0.00 0.00 2.10
931 974 1.831736 CTCGGGGGTGACTCTAACATT 59.168 52.381 0.00 0.00 0.00 2.71
932 975 1.486211 CTCGGGGGTGACTCTAACAT 58.514 55.000 0.00 0.00 0.00 2.71
943 995 1.609210 CCAAATTTGCCTCGGGGGT 60.609 57.895 12.92 0.00 37.43 4.95
963 1017 0.167908 CGCGCTGATTAAGGTTTGCA 59.832 50.000 5.56 0.00 0.00 4.08
1001 1055 3.006756 GCTCTAGCGGCACTGGTCA 62.007 63.158 1.45 0.00 0.00 4.02
1007 1061 4.840005 GTGGGGCTCTAGCGGCAC 62.840 72.222 8.67 4.95 43.26 5.01
1014 1068 0.324738 CACTGAGAGGTGGGGCTCTA 60.325 60.000 0.00 0.00 33.95 2.43
1053 1107 3.314693 GGTAGGTGATATTCTGGGTGGA 58.685 50.000 0.00 0.00 0.00 4.02
1056 1110 3.051341 TGAGGGTAGGTGATATTCTGGGT 60.051 47.826 0.00 0.00 0.00 4.51
1057 1111 3.325135 GTGAGGGTAGGTGATATTCTGGG 59.675 52.174 0.00 0.00 0.00 4.45
1058 1112 4.227197 AGTGAGGGTAGGTGATATTCTGG 58.773 47.826 0.00 0.00 0.00 3.86
1063 1117 3.235200 GCAGAGTGAGGGTAGGTGATAT 58.765 50.000 0.00 0.00 0.00 1.63
1065 1119 1.490574 GCAGAGTGAGGGTAGGTGAT 58.509 55.000 0.00 0.00 0.00 3.06
1067 1121 0.616111 AGGCAGAGTGAGGGTAGGTG 60.616 60.000 0.00 0.00 0.00 4.00
1068 1122 0.616111 CAGGCAGAGTGAGGGTAGGT 60.616 60.000 0.00 0.00 0.00 3.08
1073 1127 1.673665 GTTGCAGGCAGAGTGAGGG 60.674 63.158 0.00 0.00 0.00 4.30
1077 1131 1.068055 GGATTTGTTGCAGGCAGAGTG 60.068 52.381 0.00 0.00 0.00 3.51
1080 1134 1.202915 TGAGGATTTGTTGCAGGCAGA 60.203 47.619 0.00 0.00 0.00 4.26
1117 1174 0.603975 AGAGCAGAGTTTTGGACGGC 60.604 55.000 0.00 0.00 0.00 5.68
1118 1175 1.433534 GAGAGCAGAGTTTTGGACGG 58.566 55.000 0.00 0.00 0.00 4.79
1161 1218 1.977594 GCACAAATGGCGTAGGGTCG 61.978 60.000 0.00 0.00 0.00 4.79
1173 1230 0.889186 AGAAACCTCGCGGCACAAAT 60.889 50.000 6.13 0.00 0.00 2.32
1224 1281 1.878522 GCCATAGACCACACGAGCG 60.879 63.158 0.00 0.00 0.00 5.03
1238 1295 0.753262 AGCTACCGAGAAATCGCCAT 59.247 50.000 0.00 0.00 0.00 4.40
1242 1299 5.399892 GTCTTCATTAGCTACCGAGAAATCG 59.600 44.000 0.00 0.00 0.00 3.34
1248 1305 3.243569 CCAGGTCTTCATTAGCTACCGAG 60.244 52.174 0.00 0.00 35.32 4.63
1251 1308 2.803492 CGCCAGGTCTTCATTAGCTACC 60.803 54.545 0.00 0.00 0.00 3.18
1253 1310 2.384828 TCGCCAGGTCTTCATTAGCTA 58.615 47.619 0.00 0.00 0.00 3.32
1254 1311 1.195115 TCGCCAGGTCTTCATTAGCT 58.805 50.000 0.00 0.00 0.00 3.32
1256 1313 2.223829 ACGATCGCCAGGTCTTCATTAG 60.224 50.000 16.60 0.00 0.00 1.73
1287 1344 3.231889 CTCATCGAGGGGCATCGGG 62.232 68.421 10.82 5.00 42.93 5.14
1289 1346 2.341543 CCTCATCGAGGGGCATCG 59.658 66.667 1.84 5.12 45.43 3.84
1347 1404 0.523072 CCACACGCTTGATTTGGGAG 59.477 55.000 0.00 0.00 0.00 4.30
1350 1407 0.673437 AACCCACACGCTTGATTTGG 59.327 50.000 0.00 0.00 0.00 3.28
1353 1410 1.686355 TGAAACCCACACGCTTGATT 58.314 45.000 0.00 0.00 0.00 2.57
1374 1431 4.010349 CAAAAGGACAAGGGGTGATAGAC 58.990 47.826 0.00 0.00 0.00 2.59
1377 1434 2.556559 GCCAAAAGGACAAGGGGTGATA 60.557 50.000 0.00 0.00 0.00 2.15
1383 1440 0.681175 CTTGGCCAAAAGGACAAGGG 59.319 55.000 20.91 0.00 37.31 3.95
1404 1461 4.466828 CCACACTATTGAAGCGAACAAAG 58.533 43.478 0.00 0.00 0.00 2.77
1458 1515 7.093771 ACGTAGTGAATATCATCATGCCTATGA 60.094 37.037 0.00 0.00 43.84 2.15
1461 1518 6.590234 ACGTAGTGAATATCATCATGCCTA 57.410 37.500 0.00 0.00 42.51 3.93
1486 1543 3.054802 AGTCCTTGGTTATGCTTCTGGAG 60.055 47.826 0.00 0.00 0.00 3.86
1488 1545 3.356529 AGTCCTTGGTTATGCTTCTGG 57.643 47.619 0.00 0.00 0.00 3.86
1491 1548 6.377146 TCCAATTAAGTCCTTGGTTATGCTTC 59.623 38.462 5.65 0.00 42.13 3.86
1518 1575 4.354087 ACCTCCCTGTCTAGGTGAATTTTT 59.646 41.667 0.00 0.00 44.53 1.94
1522 1579 2.950990 ACCTCCCTGTCTAGGTGAAT 57.049 50.000 0.00 0.00 44.53 2.57
1533 1590 2.114616 AGCAGAAGACATACCTCCCTG 58.885 52.381 0.00 0.00 0.00 4.45
1536 1593 3.265791 CACAAGCAGAAGACATACCTCC 58.734 50.000 0.00 0.00 0.00 4.30
1539 1596 2.290323 ACCCACAAGCAGAAGACATACC 60.290 50.000 0.00 0.00 0.00 2.73
1542 1599 2.664402 AACCCACAAGCAGAAGACAT 57.336 45.000 0.00 0.00 0.00 3.06
1545 1602 2.091885 AGGAAAACCCACAAGCAGAAGA 60.092 45.455 0.00 0.00 37.41 2.87
1548 1605 1.691196 CAGGAAAACCCACAAGCAGA 58.309 50.000 0.00 0.00 37.41 4.26
1569 1626 6.969828 AACTCTTGAATACAACGAAGATCC 57.030 37.500 0.00 0.00 32.27 3.36
1587 1644 7.164803 AGCTTCTCACAAAATTAGCTAACTCT 58.835 34.615 8.70 0.00 37.21 3.24
1596 1653 6.549364 TCTTCCCAAAGCTTCTCACAAAATTA 59.451 34.615 0.00 0.00 32.18 1.40
1601 1658 3.576078 TCTTCCCAAAGCTTCTCACAA 57.424 42.857 0.00 0.00 32.18 3.33
1617 1674 3.323403 CCCTATCCCAGACAGACATCTTC 59.677 52.174 0.00 0.00 0.00 2.87
1629 1686 6.500589 TCAGAAGATTTAACCCTATCCCAG 57.499 41.667 0.00 0.00 0.00 4.45
1638 1695 4.397417 ACTGCTGCATCAGAAGATTTAACC 59.603 41.667 23.65 0.00 39.42 2.85
1647 1704 9.709495 AATTTAATTAAAACTGCTGCATCAGAA 57.291 25.926 23.65 8.09 37.51 3.02
1686 1743 2.744494 GCTGGCAGGTATCTCTTTGAGG 60.744 54.545 17.64 0.00 0.00 3.86
1719 1776 2.701551 TCCCCTTCCTTCTTGTCAGAA 58.298 47.619 0.00 0.00 36.62 3.02
1728 1785 1.213182 GTCCAGGATTCCCCTTCCTTC 59.787 57.143 0.00 0.00 44.85 3.46
1731 1788 0.624795 AGGTCCAGGATTCCCCTTCC 60.625 60.000 0.00 0.00 44.85 3.46
1737 1794 1.561542 ACATGACAGGTCCAGGATTCC 59.438 52.381 0.00 0.00 0.00 3.01
1743 1800 3.540211 GACCACATGACAGGTCCAG 57.460 57.895 19.25 0.00 46.79 3.86
1761 1818 5.882000 TCCAACAGGACTGTCATGAATAATG 59.118 40.000 26.94 16.01 44.13 1.90
1764 1821 4.777366 TCTCCAACAGGACTGTCATGAATA 59.223 41.667 26.94 9.65 44.13 1.75
1773 1830 1.298014 GCCCTCTCCAACAGGACTG 59.702 63.158 0.00 0.00 31.91 3.51
1776 1833 2.610859 GGGCCCTCTCCAACAGGA 60.611 66.667 17.04 0.00 31.91 3.86
1803 1860 6.520021 TTCCCATCAACAGGAATATGATCT 57.480 37.500 0.00 0.00 37.23 2.75
1824 1881 0.466922 CAGGCCTGGGATGTGGATTC 60.467 60.000 26.14 0.00 0.00 2.52
1851 1908 6.352051 CCATATTTTGATTTGGGTGATGGTGT 60.352 38.462 0.00 0.00 0.00 4.16
1857 1914 8.263640 CCAATAACCATATTTTGATTTGGGTGA 58.736 33.333 0.00 0.00 33.39 4.02
1860 1917 7.714813 GGACCAATAACCATATTTTGATTTGGG 59.285 37.037 0.00 0.00 36.31 4.12
1890 1947 6.907853 TGATTGTGGTTATGAACATCCAAA 57.092 33.333 0.00 0.00 0.00 3.28
1905 1962 0.675083 TGCCTGCAACTTGATTGTGG 59.325 50.000 0.00 0.00 40.77 4.17
1916 1973 1.552578 ATTCTGCTGATTGCCTGCAA 58.447 45.000 7.06 7.06 46.70 4.08
1932 1989 6.652900 GCTCCTCCTCTTGGATGTTATTATTC 59.347 42.308 0.00 0.00 42.29 1.75
1944 2001 0.469070 CATCCTGCTCCTCCTCTTGG 59.531 60.000 0.00 0.00 0.00 3.61
1965 2022 6.003326 CCAACCAGCATATTCCACATACATA 58.997 40.000 0.00 0.00 0.00 2.29
1969 2026 3.436325 CCCCAACCAGCATATTCCACATA 60.436 47.826 0.00 0.00 0.00 2.29
1977 2034 0.265553 AATGGCCCCAACCAGCATAT 59.734 50.000 0.00 0.00 44.71 1.78
1978 2035 0.687098 CAATGGCCCCAACCAGCATA 60.687 55.000 0.00 0.00 44.71 3.14
1981 2038 3.393106 CCAATGGCCCCAACCAGC 61.393 66.667 0.00 0.00 44.71 4.85
2016 2073 6.360370 TGAAGCTCTTGGTCTATAAGTTGT 57.640 37.500 0.00 0.00 0.00 3.32
2019 2076 5.104776 TGCATGAAGCTCTTGGTCTATAAGT 60.105 40.000 0.00 0.00 45.94 2.24
2022 2079 4.202295 CCTGCATGAAGCTCTTGGTCTATA 60.202 45.833 0.00 0.00 45.94 1.31
2023 2080 3.433314 CCTGCATGAAGCTCTTGGTCTAT 60.433 47.826 0.00 0.00 45.94 1.98
2025 2082 1.339824 CCTGCATGAAGCTCTTGGTCT 60.340 52.381 0.00 0.00 45.94 3.85
2028 2085 1.035932 CCCCTGCATGAAGCTCTTGG 61.036 60.000 0.00 0.00 45.94 3.61
2058 2115 5.954335 ACTGGTGCAAGTAAATCATTAAGC 58.046 37.500 0.00 0.00 0.00 3.09
2070 2127 3.213206 TCTTCATTGACTGGTGCAAGT 57.787 42.857 0.00 0.00 0.00 3.16
2076 2133 3.817647 GCTGACTTTCTTCATTGACTGGT 59.182 43.478 0.00 0.00 0.00 4.00
2084 2141 1.811359 GCAGCAGCTGACTTTCTTCAT 59.189 47.619 27.39 0.00 37.91 2.57
2093 2150 0.959372 ATCCTGTTGCAGCAGCTGAC 60.959 55.000 27.39 16.40 42.74 3.51
2102 2159 0.907486 CTCCTCAGGATCCTGTTGCA 59.093 55.000 35.34 19.16 43.96 4.08
2109 2166 2.151502 TGTCACTCTCCTCAGGATCC 57.848 55.000 2.48 2.48 0.00 3.36
2111 2168 4.877773 AGTTATGTCACTCTCCTCAGGAT 58.122 43.478 0.00 0.00 0.00 3.24
2113 2170 5.413309 AAAGTTATGTCACTCTCCTCAGG 57.587 43.478 0.00 0.00 0.00 3.86
2114 2171 8.006298 AGATAAAGTTATGTCACTCTCCTCAG 57.994 38.462 0.00 0.00 0.00 3.35
2126 2183 8.671921 CAGCATTGTTCAGAGATAAAGTTATGT 58.328 33.333 0.00 0.00 0.00 2.29
2127 2184 7.642978 GCAGCATTGTTCAGAGATAAAGTTATG 59.357 37.037 0.00 0.00 0.00 1.90
2139 2196 3.999001 CAGAACTAGCAGCATTGTTCAGA 59.001 43.478 20.01 0.00 40.62 3.27
2166 2223 4.415596 TGGCAGGACCATTAGTGAAAAAT 58.584 39.130 0.00 0.00 46.36 1.82
2168 2225 3.517296 TGGCAGGACCATTAGTGAAAA 57.483 42.857 0.00 0.00 46.36 2.29
2199 2259 0.548510 GTAAAGGGGCCAGCAGATCT 59.451 55.000 4.39 0.00 0.00 2.75
2200 2260 0.255890 TGTAAAGGGGCCAGCAGATC 59.744 55.000 4.39 0.00 0.00 2.75
2205 2265 0.251165 TCAACTGTAAAGGGGCCAGC 60.251 55.000 4.39 0.00 0.00 4.85
2206 2266 2.286365 TTCAACTGTAAAGGGGCCAG 57.714 50.000 4.39 0.00 0.00 4.85
2218 2278 5.105997 GGTTCAAATCTGGGAGATTCAACTG 60.106 44.000 14.67 5.71 43.67 3.16
2221 2281 5.012239 CAGGTTCAAATCTGGGAGATTCAA 58.988 41.667 0.00 0.00 43.67 2.69
2232 2292 2.624838 CTGCACAACCAGGTTCAAATCT 59.375 45.455 0.12 0.00 0.00 2.40
2246 2306 3.620488 GGAATATCCTGAACCTGCACAA 58.380 45.455 0.00 0.00 32.53 3.33
2262 2322 8.274322 TCTTCAGCAATAGGATCAAAAGGAATA 58.726 33.333 0.00 0.00 0.00 1.75
2263 2323 7.121382 TCTTCAGCAATAGGATCAAAAGGAAT 58.879 34.615 0.00 0.00 0.00 3.01
2267 2327 7.388460 ACTTCTTCAGCAATAGGATCAAAAG 57.612 36.000 0.00 0.00 0.00 2.27
2268 2328 8.862325 TTACTTCTTCAGCAATAGGATCAAAA 57.138 30.769 0.00 0.00 0.00 2.44
2286 2346 4.469227 ACTGGCACATGATCTCTTACTTCT 59.531 41.667 0.00 0.00 38.20 2.85
2292 2352 5.564550 ACTAAAACTGGCACATGATCTCTT 58.435 37.500 0.00 0.00 38.20 2.85
2298 2358 4.642437 TGTTGAACTAAAACTGGCACATGA 59.358 37.500 0.00 0.00 38.20 3.07
2300 2360 5.789643 ATGTTGAACTAAAACTGGCACAT 57.210 34.783 0.00 0.00 38.20 3.21
2302 2362 7.812648 TGTATATGTTGAACTAAAACTGGCAC 58.187 34.615 0.00 0.00 0.00 5.01
2352 2412 4.092383 GGAGCAATTGCAACATCAACATTC 59.908 41.667 30.89 14.94 45.16 2.67
2353 2413 3.998341 GGAGCAATTGCAACATCAACATT 59.002 39.130 30.89 6.65 45.16 2.71
2360 2420 2.366266 ACTTGTGGAGCAATTGCAACAT 59.634 40.909 30.89 11.52 45.16 2.71
2368 2428 2.559668 CAACATGGACTTGTGGAGCAAT 59.440 45.455 0.00 0.00 36.36 3.56
2372 2432 1.608055 TGCAACATGGACTTGTGGAG 58.392 50.000 0.00 0.00 0.00 3.86
2373 2433 2.064434 TTGCAACATGGACTTGTGGA 57.936 45.000 0.00 0.00 0.00 4.02
2378 2438 6.056884 ACATTTTCAATTGCAACATGGACTT 58.943 32.000 0.00 0.00 0.00 3.01
2381 2441 6.990798 TCTACATTTTCAATTGCAACATGGA 58.009 32.000 0.00 0.00 0.00 3.41
2382 2442 7.332430 ACATCTACATTTTCAATTGCAACATGG 59.668 33.333 0.00 0.00 0.00 3.66
2393 2453 5.771469 CCACTGCAACATCTACATTTTCAA 58.229 37.500 0.00 0.00 0.00 2.69
2394 2454 4.321156 GCCACTGCAACATCTACATTTTCA 60.321 41.667 0.00 0.00 37.47 2.69
2399 2459 2.636830 GAGCCACTGCAACATCTACAT 58.363 47.619 0.00 0.00 41.13 2.29
2402 2462 1.279496 AGGAGCCACTGCAACATCTA 58.721 50.000 0.00 0.00 41.13 1.98
2413 2473 0.807496 GCAACATCTGAAGGAGCCAC 59.193 55.000 0.00 0.00 0.00 5.01
2414 2474 0.401356 TGCAACATCTGAAGGAGCCA 59.599 50.000 0.00 0.00 0.00 4.75
2415 2475 1.538047 TTGCAACATCTGAAGGAGCC 58.462 50.000 0.00 0.00 0.00 4.70
2417 2477 3.760151 TGGAATTGCAACATCTGAAGGAG 59.240 43.478 0.00 0.00 0.00 3.69
2422 2482 4.501229 GGTGTTTGGAATTGCAACATCTGA 60.501 41.667 12.36 0.00 33.15 3.27
2424 2484 3.642848 AGGTGTTTGGAATTGCAACATCT 59.357 39.130 12.36 14.99 37.10 2.90
2425 2485 3.993920 AGGTGTTTGGAATTGCAACATC 58.006 40.909 12.36 13.17 33.15 3.06
2426 2486 4.420522 AAGGTGTTTGGAATTGCAACAT 57.579 36.364 12.36 0.00 33.15 2.71
2428 2488 4.875536 AGAAAAGGTGTTTGGAATTGCAAC 59.124 37.500 12.36 8.34 0.00 4.17
2442 2502 4.221703 TCCTGAGCTAGAGAAGAAAAGGTG 59.778 45.833 0.00 0.00 0.00 4.00
2443 2503 4.421131 TCCTGAGCTAGAGAAGAAAAGGT 58.579 43.478 0.00 0.00 0.00 3.50
2446 2506 4.421131 ACCTCCTGAGCTAGAGAAGAAAA 58.579 43.478 9.00 0.00 31.43 2.29
2450 2510 3.360867 TCAACCTCCTGAGCTAGAGAAG 58.639 50.000 9.00 0.00 31.43 2.85
2454 2514 1.359474 ACCTCAACCTCCTGAGCTAGA 59.641 52.381 0.00 0.00 41.36 2.43
2456 2516 1.359474 AGACCTCAACCTCCTGAGCTA 59.641 52.381 0.00 0.00 41.36 3.32
2459 2519 1.824230 CTGAGACCTCAACCTCCTGAG 59.176 57.143 1.08 0.00 42.19 3.35
2466 2526 1.620819 TGAAGCTCTGAGACCTCAACC 59.379 52.381 9.28 0.00 39.39 3.77
2473 2533 3.303659 GCAACAAGTTGAAGCTCTGAGAC 60.304 47.826 16.54 0.00 42.93 3.36
2474 2534 2.874701 GCAACAAGTTGAAGCTCTGAGA 59.125 45.455 16.54 0.00 42.93 3.27
2480 2540 3.874392 ACAAAGCAACAAGTTGAAGCT 57.126 38.095 16.54 14.61 42.93 3.74
2482 2542 4.563976 CCTCAACAAAGCAACAAGTTGAAG 59.436 41.667 16.54 2.38 46.56 3.02
2485 2545 2.604462 GCCTCAACAAAGCAACAAGTTG 59.396 45.455 8.53 8.53 41.90 3.16
2487 2547 1.136891 GGCCTCAACAAAGCAACAAGT 59.863 47.619 0.00 0.00 0.00 3.16
2489 2549 1.136695 CAGGCCTCAACAAAGCAACAA 59.863 47.619 0.00 0.00 0.00 2.83
2493 2553 0.106769 TGTCAGGCCTCAACAAAGCA 60.107 50.000 13.88 0.00 0.00 3.91
2494 2554 0.312102 GTGTCAGGCCTCAACAAAGC 59.688 55.000 17.12 4.13 0.00 3.51
2495 2555 1.972872 AGTGTCAGGCCTCAACAAAG 58.027 50.000 17.12 0.00 0.00 2.77
2496 2556 2.810400 GCTAGTGTCAGGCCTCAACAAA 60.810 50.000 17.12 9.18 0.00 2.83
2497 2557 1.270839 GCTAGTGTCAGGCCTCAACAA 60.271 52.381 17.12 4.48 0.00 2.83
2498 2558 0.321671 GCTAGTGTCAGGCCTCAACA 59.678 55.000 0.00 8.03 0.00 3.33
2499 2559 0.391793 GGCTAGTGTCAGGCCTCAAC 60.392 60.000 0.00 4.82 42.31 3.18
2500 2560 0.835971 TGGCTAGTGTCAGGCCTCAA 60.836 55.000 0.00 0.00 45.45 3.02
2501 2561 0.835971 TTGGCTAGTGTCAGGCCTCA 60.836 55.000 0.00 0.00 45.45 3.86
2502 2562 0.391793 GTTGGCTAGTGTCAGGCCTC 60.392 60.000 0.00 0.00 45.45 4.70
2503 2563 0.838122 AGTTGGCTAGTGTCAGGCCT 60.838 55.000 0.00 0.00 45.45 5.19
2504 2564 0.036875 AAGTTGGCTAGTGTCAGGCC 59.963 55.000 0.00 0.00 45.45 5.19
2505 2565 1.160137 CAAGTTGGCTAGTGTCAGGC 58.840 55.000 0.00 0.00 41.33 4.85
2506 2566 2.839486 TCAAGTTGGCTAGTGTCAGG 57.161 50.000 2.34 0.00 0.00 3.86
2507 2567 4.180057 GAGATCAAGTTGGCTAGTGTCAG 58.820 47.826 2.34 0.00 0.00 3.51
2508 2568 3.055819 GGAGATCAAGTTGGCTAGTGTCA 60.056 47.826 2.34 0.00 0.00 3.58
2509 2569 3.055819 TGGAGATCAAGTTGGCTAGTGTC 60.056 47.826 2.34 0.00 0.00 3.67
2510 2570 2.906389 TGGAGATCAAGTTGGCTAGTGT 59.094 45.455 2.34 0.00 0.00 3.55
2511 2571 3.616956 TGGAGATCAAGTTGGCTAGTG 57.383 47.619 2.34 0.00 0.00 2.74
2512 2572 3.683847 GCATGGAGATCAAGTTGGCTAGT 60.684 47.826 2.34 0.00 0.00 2.57
2517 2577 5.128205 TCAATAGCATGGAGATCAAGTTGG 58.872 41.667 2.34 0.00 0.00 3.77
2520 2580 8.162085 ACATTATCAATAGCATGGAGATCAAGT 58.838 33.333 0.00 0.00 0.00 3.16
2523 2583 7.682628 TGACATTATCAATAGCATGGAGATCA 58.317 34.615 0.00 0.00 33.02 2.92
2540 2600 4.142093 GCAAGGCAGGATTGTTGACATTAT 60.142 41.667 0.00 0.00 0.00 1.28
2542 2602 2.028748 GCAAGGCAGGATTGTTGACATT 60.029 45.455 0.00 0.00 0.00 2.71
2543 2603 1.547372 GCAAGGCAGGATTGTTGACAT 59.453 47.619 0.00 0.00 0.00 3.06
2546 2606 0.178967 TGGCAAGGCAGGATTGTTGA 60.179 50.000 0.00 0.00 0.00 3.18
2552 2612 2.044252 CAGCTGGCAAGGCAGGAT 60.044 61.111 22.73 2.41 0.00 3.24
2562 2622 1.134580 TCTGTAGAATCAGCAGCTGGC 60.135 52.381 22.62 12.00 45.30 4.85
2564 2624 2.608546 GCTTCTGTAGAATCAGCAGCTG 59.391 50.000 17.10 17.10 45.86 4.24
2565 2625 2.903798 GCTTCTGTAGAATCAGCAGCT 58.096 47.619 10.08 0.00 45.86 4.24
2569 2629 4.507388 GTCATGAGCTTCTGTAGAATCAGC 59.493 45.833 0.00 0.00 35.63 4.26
2573 2633 4.100808 GGGAGTCATGAGCTTCTGTAGAAT 59.899 45.833 0.00 0.00 33.01 2.40
2576 2636 2.762887 TGGGAGTCATGAGCTTCTGTAG 59.237 50.000 0.00 0.00 0.00 2.74
2578 2638 1.554160 CTGGGAGTCATGAGCTTCTGT 59.446 52.381 0.00 0.00 0.00 3.41
2584 2644 0.177604 CCAGTCTGGGAGTCATGAGC 59.822 60.000 11.46 0.00 32.67 4.26
2589 2649 1.133167 TGAAGACCAGTCTGGGAGTCA 60.133 52.381 23.06 17.71 43.37 3.41
2591 2651 1.133009 AGTGAAGACCAGTCTGGGAGT 60.133 52.381 23.06 6.99 43.37 3.85
2595 2655 4.039245 TCAAGTAAGTGAAGACCAGTCTGG 59.961 45.833 17.88 17.88 45.02 3.86
2605 2665 5.616424 GCTGAGCATGTTCAAGTAAGTGAAG 60.616 44.000 13.57 0.00 38.17 3.02
2607 2667 3.748048 GCTGAGCATGTTCAAGTAAGTGA 59.252 43.478 13.57 0.00 0.00 3.41
2613 2673 1.531423 CAGGCTGAGCATGTTCAAGT 58.469 50.000 11.42 0.00 35.52 3.16
2615 2675 0.537828 TGCAGGCTGAGCATGTTCAA 60.538 50.000 20.71 1.57 42.60 2.69
2619 2679 0.611062 ATGTTGCAGGCTGAGCATGT 60.611 50.000 20.71 0.00 42.60 3.21
2620 2680 0.530744 AATGTTGCAGGCTGAGCATG 59.469 50.000 20.86 15.56 43.53 4.06
2621 2681 0.530744 CAATGTTGCAGGCTGAGCAT 59.469 50.000 20.86 14.98 42.33 3.79
2625 2685 1.533625 GTACCAATGTTGCAGGCTGA 58.466 50.000 20.86 0.00 0.00 4.26
2633 2693 5.138125 AGCATCAAAAGGTACCAATGTTG 57.862 39.130 15.94 14.61 0.00 3.33
2661 2724 0.814812 GCTGCTCCAGAATCTGCTCC 60.815 60.000 4.40 0.00 32.44 4.70
2671 2734 3.196463 CAGAAGTAGAATGCTGCTCCAG 58.804 50.000 0.00 0.00 32.60 3.86
2676 2739 3.748048 TCAACACAGAAGTAGAATGCTGC 59.252 43.478 0.00 0.00 31.74 5.25
2683 2746 6.653320 ACAACTTTGTTCAACACAGAAGTAGA 59.347 34.615 10.75 0.00 38.47 2.59
2687 2750 4.858692 CCACAACTTTGTTCAACACAGAAG 59.141 41.667 10.75 4.90 39.91 2.85
2704 2767 5.473039 AGATAATTCTTGCAAAGCCACAAC 58.527 37.500 0.00 0.00 45.70 3.32
2705 2768 5.726980 AGATAATTCTTGCAAAGCCACAA 57.273 34.783 0.00 0.00 45.70 3.33
2725 2788 3.199442 TGGGATCTTGACCAGGTTAGA 57.801 47.619 7.60 7.60 31.92 2.10
2729 2792 3.833559 AAATTGGGATCTTGACCAGGT 57.166 42.857 0.00 0.00 38.16 4.00
2739 2803 7.559897 TGATCCTTTTGGTAGTAAATTGGGATC 59.440 37.037 0.00 0.00 38.78 3.36
2740 2804 7.418378 TGATCCTTTTGGTAGTAAATTGGGAT 58.582 34.615 0.00 0.00 41.38 3.85
2742 2806 7.363793 CCTTGATCCTTTTGGTAGTAAATTGGG 60.364 40.741 0.00 0.00 41.38 4.12
2744 2808 8.122472 ACCTTGATCCTTTTGGTAGTAAATTG 57.878 34.615 0.00 0.00 41.38 2.32
2746 2810 8.612145 AGTACCTTGATCCTTTTGGTAGTAAAT 58.388 33.333 0.00 0.00 41.38 1.40
2747 2811 7.981142 AGTACCTTGATCCTTTTGGTAGTAAA 58.019 34.615 0.00 0.00 41.38 2.01
2750 2814 6.729569 AGTAGTACCTTGATCCTTTTGGTAGT 59.270 38.462 0.00 0.00 41.38 2.73
2753 2817 5.045797 GGAGTAGTACCTTGATCCTTTTGGT 60.046 44.000 0.00 0.00 41.38 3.67
2757 2821 6.155393 CAGAAGGAGTAGTACCTTGATCCTTT 59.845 42.308 17.39 8.58 44.95 3.11
2758 2822 5.659079 CAGAAGGAGTAGTACCTTGATCCTT 59.341 44.000 16.66 16.66 46.99 3.36
2778 2842 0.693049 GGAAACCAGGAGGAGCAGAA 59.307 55.000 0.00 0.00 38.69 3.02
2799 2863 8.001300 TCTGTATTCCTTGATAGATAGGGAGA 57.999 38.462 0.00 0.00 32.20 3.71
2817 2881 9.277783 GCTCCAACTGTGATATTATTCTGTATT 57.722 33.333 0.00 0.00 0.00 1.89
2818 2882 8.432013 TGCTCCAACTGTGATATTATTCTGTAT 58.568 33.333 0.00 0.00 0.00 2.29
2820 2884 6.653020 TGCTCCAACTGTGATATTATTCTGT 58.347 36.000 0.00 0.00 0.00 3.41
2823 2887 6.860023 GCATTGCTCCAACTGTGATATTATTC 59.140 38.462 0.16 0.00 0.00 1.75
2841 2905 5.302360 ACATCAAACAGAAATTGCATTGCT 58.698 33.333 10.49 0.00 30.84 3.91
2844 2908 6.588756 CAGCTACATCAAACAGAAATTGCATT 59.411 34.615 0.00 0.00 0.00 3.56
2858 2922 6.003326 TGAAAAACTGGATCAGCTACATCAA 58.997 36.000 7.06 0.00 34.37 2.57
2868 2932 6.218019 CAGCATCTTTTGAAAAACTGGATCA 58.782 36.000 0.00 0.00 0.00 2.92
2907 2971 7.324388 TCCTTCCTTACCTAAGATTTGTGAA 57.676 36.000 0.00 0.00 35.33 3.18
2925 2989 4.906747 ATTCCAGATAGATGCTCCTTCC 57.093 45.455 0.00 0.00 0.00 3.46
2946 3010 3.857157 AAGGAAGGTGCAAAGTGAGTA 57.143 42.857 0.00 0.00 0.00 2.59
2952 3016 3.476552 TGTGTCTAAGGAAGGTGCAAAG 58.523 45.455 0.00 0.00 0.00 2.77
2961 3025 4.163458 ACCACTTTGTCTGTGTCTAAGGAA 59.837 41.667 0.00 0.00 33.92 3.36
2966 3030 4.442893 CCTGAACCACTTTGTCTGTGTCTA 60.443 45.833 0.00 0.00 33.92 2.59
2971 3035 3.433173 GGTACCTGAACCACTTTGTCTGT 60.433 47.826 4.06 0.00 39.50 3.41
3015 3079 0.251341 GGGAGAGCAAAGCAAGGGAA 60.251 55.000 0.00 0.00 0.00 3.97
3021 3085 0.837691 TCTCAGGGGAGAGCAAAGCA 60.838 55.000 0.00 0.00 45.12 3.91
3039 3103 6.145535 CAGTGACTTTGCCTACTCAAATTTC 58.854 40.000 0.00 0.00 35.64 2.17
3050 3114 3.008375 TGAAGATAGCAGTGACTTTGCCT 59.992 43.478 0.00 0.00 42.48 4.75
3060 3124 5.769662 TGTCCAAATTTGTGAAGATAGCAGT 59.230 36.000 16.73 0.00 0.00 4.40
3075 3139 9.136323 GAACCTTCCAGAATATATGTCCAAATT 57.864 33.333 0.00 0.00 0.00 1.82
3102 3166 7.610692 ACAAAAGGCTTAAAGAGATTACTACCC 59.389 37.037 0.00 0.00 0.00 3.69
3104 3168 9.216117 TGACAAAAGGCTTAAAGAGATTACTAC 57.784 33.333 0.00 0.00 0.00 2.73
3111 3175 6.207417 CAGGAATGACAAAAGGCTTAAAGAGA 59.793 38.462 0.00 0.00 0.00 3.10
3138 3202 1.242076 CCTGGGCAGAAGAACACTTG 58.758 55.000 0.00 0.00 0.00 3.16
3141 3205 1.973812 GGCCTGGGCAGAAGAACAC 60.974 63.158 16.34 0.00 44.11 3.32
3145 3209 2.123632 AGAGGCCTGGGCAGAAGA 59.876 61.111 23.25 0.00 44.11 2.87
3178 3242 2.550830 TCCTCAACTGCTTCCAGAAC 57.449 50.000 0.00 0.00 41.77 3.01
3181 3245 1.163554 GCTTCCTCAACTGCTTCCAG 58.836 55.000 0.00 0.00 44.80 3.86
3185 3249 1.968540 GGCGCTTCCTCAACTGCTT 60.969 57.895 7.64 0.00 0.00 3.91
3191 3255 2.672996 GCTTGGGCGCTTCCTCAA 60.673 61.111 7.64 4.09 34.39 3.02
3192 3256 3.640407 AGCTTGGGCGCTTCCTCA 61.640 61.111 7.64 0.00 44.37 3.86
3216 3280 5.770162 GGATTTCTTTTCTTGAGGAGTGGAA 59.230 40.000 0.00 0.00 0.00 3.53
3225 3289 5.829924 AGTTGCAGAGGATTTCTTTTCTTGA 59.170 36.000 0.00 0.00 32.41 3.02
3231 3295 3.571401 CCACAGTTGCAGAGGATTTCTTT 59.429 43.478 0.00 0.00 32.41 2.52
3244 3308 1.360192 GTTGCACCTCCACAGTTGC 59.640 57.895 0.00 0.00 0.00 4.17
3245 3309 2.032981 GGTTGCACCTCCACAGTTG 58.967 57.895 0.00 0.00 34.73 3.16
3255 3319 3.189287 CAGATGTACTTGAAGGTTGCACC 59.811 47.826 0.00 0.00 38.99 5.01
3270 3334 5.337578 TGTTAGCATGCACTACAGATGTA 57.662 39.130 21.98 0.00 0.00 2.29
3276 3340 3.260632 TCTTCCTGTTAGCATGCACTACA 59.739 43.478 21.98 18.12 0.00 2.74
3278 3342 3.118629 CCTCTTCCTGTTAGCATGCACTA 60.119 47.826 21.98 0.73 0.00 2.74
3302 3366 1.893137 CTGCCAAGGGTAACTTTTCCC 59.107 52.381 0.00 0.00 43.71 3.97
3303 3367 2.820197 CTCTGCCAAGGGTAACTTTTCC 59.180 50.000 0.00 0.00 37.29 3.13
3324 3388 5.187967 TCTTTCATTCCTCCTTACCTCAGAC 59.812 44.000 0.00 0.00 0.00 3.51
3363 3427 9.847224 AGACAAAGATTTCTCTTGTAACCTTTA 57.153 29.630 7.59 0.00 40.93 1.85
3372 3436 7.334090 TCCTATCCAGACAAAGATTTCTCTTG 58.666 38.462 0.00 0.00 40.93 3.02
3378 3442 8.655935 AACAATTCCTATCCAGACAAAGATTT 57.344 30.769 0.00 0.00 0.00 2.17
3396 3460 3.983344 CAGCACTACAAGGCAAACAATTC 59.017 43.478 0.00 0.00 0.00 2.17
3408 3472 4.546674 TGATAGGAGGATCAGCACTACAA 58.453 43.478 0.00 0.00 36.25 2.41
3413 3477 3.072944 GCAATGATAGGAGGATCAGCAC 58.927 50.000 0.00 0.00 39.18 4.40
3456 3520 2.625314 AGTTTTGCAAAAGGAGGAGCTC 59.375 45.455 24.46 4.71 0.00 4.09
3480 3544 2.245806 AGCAGGAGGGCCATTAAATTCT 59.754 45.455 6.18 0.00 36.29 2.40
3549 3613 1.988846 CCTTTCCTCTGGGACCTCTTT 59.011 52.381 0.00 0.00 42.05 2.52
3551 3615 0.793617 TCCTTTCCTCTGGGACCTCT 59.206 55.000 0.00 0.00 42.05 3.69
3558 3622 1.003696 GTTCCTGGTCCTTTCCTCTGG 59.996 57.143 0.00 0.00 0.00 3.86
3570 3634 0.980423 GCTTCTCCTCAGTTCCTGGT 59.020 55.000 0.00 0.00 31.51 4.00
3572 3636 3.450457 ACTATGCTTCTCCTCAGTTCCTG 59.550 47.826 0.00 0.00 0.00 3.86
3577 3641 3.445008 TCCAACTATGCTTCTCCTCAGT 58.555 45.455 0.00 0.00 0.00 3.41
3579 3643 5.045651 TGAAATCCAACTATGCTTCTCCTCA 60.046 40.000 0.00 0.00 0.00 3.86
3580 3644 5.431765 TGAAATCCAACTATGCTTCTCCTC 58.568 41.667 0.00 0.00 0.00 3.71
3586 3650 6.261826 GCAGATACTGAAATCCAACTATGCTT 59.738 38.462 2.81 0.00 32.44 3.91
3588 3652 5.528690 TGCAGATACTGAAATCCAACTATGC 59.471 40.000 2.81 0.00 32.44 3.14
3589 3653 7.496920 TCTTGCAGATACTGAAATCCAACTATG 59.503 37.037 2.81 0.00 32.44 2.23
3660 3726 5.724370 TGAAACTGAAGGTCCAGGACATATA 59.276 40.000 21.75 6.09 38.44 0.86
3661 3727 4.536090 TGAAACTGAAGGTCCAGGACATAT 59.464 41.667 21.75 6.33 38.44 1.78
3670 3736 6.438763 CATTACAAACTGAAACTGAAGGTCC 58.561 40.000 0.00 0.00 0.00 4.46
3671 3737 5.915196 GCATTACAAACTGAAACTGAAGGTC 59.085 40.000 0.00 0.00 0.00 3.85
3675 3741 5.748152 GCAAGCATTACAAACTGAAACTGAA 59.252 36.000 0.00 0.00 0.00 3.02
3676 3742 5.280945 GCAAGCATTACAAACTGAAACTGA 58.719 37.500 0.00 0.00 0.00 3.41
3687 3753 2.875296 AGGTTCAGGCAAGCATTACAA 58.125 42.857 0.00 0.00 34.67 2.41
3700 3766 4.058817 GACACCACAGAAACTAGGTTCAG 58.941 47.826 22.29 16.70 30.44 3.02
3706 3772 4.271696 TCCATGACACCACAGAAACTAG 57.728 45.455 0.00 0.00 0.00 2.57
3711 3777 3.148412 CAACATCCATGACACCACAGAA 58.852 45.455 0.00 0.00 0.00 3.02
3713 3779 1.200716 GCAACATCCATGACACCACAG 59.799 52.381 0.00 0.00 0.00 3.66
3730 3796 6.869913 CAGAAAAAGCTCAAATATTCTGGCAA 59.130 34.615 11.90 0.00 39.84 4.52
3740 3806 9.598517 TGTAAAAATCACAGAAAAAGCTCAAAT 57.401 25.926 0.00 0.00 0.00 2.32
3744 3810 8.534778 CACTTGTAAAAATCACAGAAAAAGCTC 58.465 33.333 0.00 0.00 0.00 4.09
3749 3815 7.093354 TGTGCACTTGTAAAAATCACAGAAAA 58.907 30.769 19.41 0.00 0.00 2.29
3752 3818 5.826601 TGTGCACTTGTAAAAATCACAGA 57.173 34.783 19.41 0.00 0.00 3.41
3776 3843 6.811634 ATTATGCATGGGAAAAATCAAGGA 57.188 33.333 10.16 0.00 0.00 3.36
3783 3850 8.766476 TCCAAATTCTATTATGCATGGGAAAAA 58.234 29.630 10.16 0.00 0.00 1.94
3789 3856 9.199982 GAATGTTCCAAATTCTATTATGCATGG 57.800 33.333 10.16 0.00 32.38 3.66
3814 3881 5.178096 TGCCTCTTACATTCCAATTGAGA 57.822 39.130 7.12 0.00 0.00 3.27
3850 3917 4.323417 TGTTGGCTATGACTAACCACTTG 58.677 43.478 0.00 0.00 30.57 3.16
3861 3928 5.465532 TTCAGCAATTTTGTTGGCTATGA 57.534 34.783 7.20 0.00 39.49 2.15
3862 3929 5.292589 GGATTCAGCAATTTTGTTGGCTATG 59.707 40.000 7.20 0.00 39.49 2.23
3879 3946 5.064834 CAGATGACATCACAGTTGGATTCAG 59.935 44.000 17.57 0.00 0.00 3.02
3884 3951 4.356405 AACAGATGACATCACAGTTGGA 57.644 40.909 17.57 0.00 0.00 3.53
3994 4061 1.841302 GACCTCCTGATGCACCCACA 61.841 60.000 0.00 0.00 0.00 4.17
4003 4070 4.934797 TCCAATGAAAAGACCTCCTGAT 57.065 40.909 0.00 0.00 0.00 2.90
4006 4073 3.593328 TCCATCCAATGAAAAGACCTCCT 59.407 43.478 0.00 0.00 0.00 3.69
4009 4076 4.713321 CCATTCCATCCAATGAAAAGACCT 59.287 41.667 0.00 0.00 36.03 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.