Multiple sequence alignment - TraesCS4B01G288300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G288300 chr4B 100.000 2545 0 0 1 2545 573295273 573297817 0.000000e+00 4700.0
1 TraesCS4B01G288300 chr4D 91.931 979 42 14 597 1556 459059826 459060786 0.000000e+00 1336.0
2 TraesCS4B01G288300 chr4D 91.651 527 42 2 1640 2164 434459109 434458583 0.000000e+00 728.0
3 TraesCS4B01G288300 chr4D 84.742 485 36 12 1079 1555 459066147 459066601 3.860000e-123 451.0
4 TraesCS4B01G288300 chr4D 88.235 340 21 9 256 580 459059501 459059836 3.070000e-104 388.0
5 TraesCS4B01G288300 chr4D 79.487 312 32 14 1053 1356 459068444 459068731 2.580000e-45 193.0
6 TraesCS4B01G288300 chr4D 87.500 64 7 1 10 73 36351538 36351600 3.510000e-09 73.1
7 TraesCS4B01G288300 chr4D 81.928 83 15 0 1556 1638 459066618 459066700 1.260000e-08 71.3
8 TraesCS4B01G288300 chr4A 91.327 957 52 19 697 1636 9908376 9907434 0.000000e+00 1279.0
9 TraesCS4B01G288300 chr4A 90.939 309 21 6 258 564 9908821 9908518 2.360000e-110 409.0
10 TraesCS4B01G288300 chr4A 83.055 419 37 9 1085 1499 9626499 9626111 1.450000e-92 350.0
11 TraesCS4B01G288300 chr4A 85.806 310 21 9 1248 1556 9629193 9628906 8.840000e-80 307.0
12 TraesCS4B01G288300 chr4A 86.935 199 22 3 62 256 695492920 695493118 1.190000e-53 220.0
13 TraesCS4B01G288300 chr4A 80.277 289 30 8 1078 1363 9623473 9623209 2.580000e-45 193.0
14 TraesCS4B01G288300 chr1B 94.173 532 29 2 1639 2168 461614837 461614306 0.000000e+00 809.0
15 TraesCS4B01G288300 chr1B 93.609 532 32 2 1638 2167 670913558 670914089 0.000000e+00 793.0
16 TraesCS4B01G288300 chr1B 89.474 532 53 3 1639 2167 16430778 16430247 0.000000e+00 669.0
17 TraesCS4B01G288300 chr1B 88.442 199 19 3 62 256 667744792 667744594 1.180000e-58 237.0
18 TraesCS4B01G288300 chr1B 92.188 64 4 1 10 73 504586296 504586234 3.490000e-14 89.8
19 TraesCS4B01G288300 chr1B 90.909 66 4 2 5 69 664778789 664778853 1.250000e-13 87.9
20 TraesCS4B01G288300 chr5B 91.078 538 44 4 1632 2167 658390154 658390689 0.000000e+00 725.0
21 TraesCS4B01G288300 chr5B 90.584 531 48 2 1638 2166 84035154 84035684 0.000000e+00 702.0
22 TraesCS4B01G288300 chr5B 90.112 536 48 5 1639 2171 545332909 545332376 0.000000e+00 691.0
23 TraesCS4B01G288300 chr5B 89.231 65 4 3 10 73 681820954 681821016 7.550000e-11 78.7
24 TraesCS4B01G288300 chr6B 89.777 538 52 3 1642 2177 40578025 40577489 0.000000e+00 686.0
25 TraesCS4B01G288300 chr6B 89.062 64 6 1 10 73 704512230 704512292 7.550000e-11 78.7
26 TraesCS4B01G288300 chr2B 89.831 531 52 2 1639 2167 548767929 548768459 0.000000e+00 680.0
27 TraesCS4B01G288300 chr3D 87.940 199 20 3 62 256 606080441 606080243 5.480000e-57 231.0
28 TraesCS4B01G288300 chr1D 87.940 199 20 3 62 256 469043870 469044068 5.480000e-57 231.0
29 TraesCS4B01G288300 chr1D 89.062 64 6 1 10 73 469043854 469043916 7.550000e-11 78.7
30 TraesCS4B01G288300 chr1D 87.692 65 5 3 10 73 471113618 471113556 3.510000e-09 73.1
31 TraesCS4B01G288300 chr7D 87.817 197 20 3 67 260 83598713 83598908 7.080000e-56 228.0
32 TraesCS4B01G288300 chr7D 85.930 199 24 3 62 256 549317626 549317428 2.570000e-50 209.0
33 TraesCS4B01G288300 chr7D 80.137 146 19 5 2312 2457 43074224 43074089 1.610000e-17 100.0
34 TraesCS4B01G288300 chr5D 87.437 199 21 3 62 256 2621924 2621726 2.550000e-55 226.0
35 TraesCS4B01G288300 chr3A 87.129 202 21 5 62 259 101667330 101667130 9.160000e-55 224.0
36 TraesCS4B01G288300 chrUn 85.572 201 25 3 62 258 79261304 79261104 9.230000e-50 207.0
37 TraesCS4B01G288300 chrUn 89.062 64 6 1 10 73 79261320 79261258 7.550000e-11 78.7
38 TraesCS4B01G288300 chr6D 88.660 97 10 1 2270 2366 2506587 2506682 1.600000e-22 117.0
39 TraesCS4B01G288300 chr6D 89.062 64 6 1 10 73 368209198 368209260 7.550000e-11 78.7
40 TraesCS4B01G288300 chr3B 100.000 28 0 0 2512 2539 595300092 595300119 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G288300 chr4B 573295273 573297817 2544 False 4700.000000 4700 100.000000 1 2545 1 chr4B.!!$F1 2544
1 TraesCS4B01G288300 chr4D 459059501 459060786 1285 False 862.000000 1336 90.083000 256 1556 2 chr4D.!!$F2 1300
2 TraesCS4B01G288300 chr4D 434458583 434459109 526 True 728.000000 728 91.651000 1640 2164 1 chr4D.!!$R1 524
3 TraesCS4B01G288300 chr4D 459066147 459068731 2584 False 238.433333 451 82.052333 1053 1638 3 chr4D.!!$F3 585
4 TraesCS4B01G288300 chr4A 9907434 9908821 1387 True 844.000000 1279 91.133000 258 1636 2 chr4A.!!$R2 1378
5 TraesCS4B01G288300 chr4A 9623209 9629193 5984 True 283.333333 350 83.046000 1078 1556 3 chr4A.!!$R1 478
6 TraesCS4B01G288300 chr1B 461614306 461614837 531 True 809.000000 809 94.173000 1639 2168 1 chr1B.!!$R2 529
7 TraesCS4B01G288300 chr1B 670913558 670914089 531 False 793.000000 793 93.609000 1638 2167 1 chr1B.!!$F2 529
8 TraesCS4B01G288300 chr1B 16430247 16430778 531 True 669.000000 669 89.474000 1639 2167 1 chr1B.!!$R1 528
9 TraesCS4B01G288300 chr5B 658390154 658390689 535 False 725.000000 725 91.078000 1632 2167 1 chr5B.!!$F2 535
10 TraesCS4B01G288300 chr5B 84035154 84035684 530 False 702.000000 702 90.584000 1638 2166 1 chr5B.!!$F1 528
11 TraesCS4B01G288300 chr5B 545332376 545332909 533 True 691.000000 691 90.112000 1639 2171 1 chr5B.!!$R1 532
12 TraesCS4B01G288300 chr6B 40577489 40578025 536 True 686.000000 686 89.777000 1642 2177 1 chr6B.!!$R1 535
13 TraesCS4B01G288300 chr2B 548767929 548768459 530 False 680.000000 680 89.831000 1639 2167 1 chr2B.!!$F1 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
362 370 0.03438 TTCTCATCGTCGGTCCCTCT 60.034 55.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2157 6255 0.031721 GTCGTACGAATAGGGCTGGG 59.968 60.0 21.39 0.0 0.0 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.949031 CTAGTCTTAGCAGGCGTCC 57.051 57.895 0.00 0.00 0.00 4.79
22 23 1.103803 CTAGTCTTAGCAGGCGTCCA 58.896 55.000 0.00 0.00 0.00 4.02
23 24 1.476891 CTAGTCTTAGCAGGCGTCCAA 59.523 52.381 0.00 0.00 0.00 3.53
24 25 0.685097 AGTCTTAGCAGGCGTCCAAA 59.315 50.000 0.00 0.00 0.00 3.28
25 26 1.071699 AGTCTTAGCAGGCGTCCAAAA 59.928 47.619 0.00 0.00 0.00 2.44
26 27 1.877443 GTCTTAGCAGGCGTCCAAAAA 59.123 47.619 0.00 0.00 0.00 1.94
28 29 1.606668 CTTAGCAGGCGTCCAAAAACA 59.393 47.619 0.00 0.00 0.00 2.83
29 30 0.948678 TAGCAGGCGTCCAAAAACAC 59.051 50.000 0.00 0.00 0.00 3.32
30 31 1.657181 GCAGGCGTCCAAAAACACG 60.657 57.895 0.00 0.00 39.09 4.49
32 33 0.591236 CAGGCGTCCAAAAACACGTG 60.591 55.000 15.48 15.48 38.32 4.49
33 34 1.942223 GGCGTCCAAAAACACGTGC 60.942 57.895 17.22 0.00 38.32 5.34
34 35 1.942223 GCGTCCAAAAACACGTGCC 60.942 57.895 17.22 0.00 38.32 5.01
38 39 0.895530 TCCAAAAACACGTGCCCAAA 59.104 45.000 17.22 0.00 0.00 3.28
39 40 1.275291 TCCAAAAACACGTGCCCAAAA 59.725 42.857 17.22 0.00 0.00 2.44
40 41 2.076863 CCAAAAACACGTGCCCAAAAA 58.923 42.857 17.22 0.00 0.00 1.94
41 42 2.095053 CCAAAAACACGTGCCCAAAAAG 59.905 45.455 17.22 0.00 0.00 2.27
42 43 1.364721 AAAACACGTGCCCAAAAAGC 58.635 45.000 17.22 0.00 0.00 3.51
44 45 0.179113 AACACGTGCCCAAAAAGCAG 60.179 50.000 17.22 0.00 41.87 4.24
46 47 0.594796 CACGTGCCCAAAAAGCAGAC 60.595 55.000 0.82 0.00 41.87 3.51
47 48 1.034838 ACGTGCCCAAAAAGCAGACA 61.035 50.000 0.00 0.00 41.87 3.41
62 63 3.713858 CAGACAGTGCAAATTGTGGAA 57.286 42.857 4.67 0.00 0.00 3.53
63 64 3.374745 CAGACAGTGCAAATTGTGGAAC 58.625 45.455 4.67 0.00 37.35 3.62
64 65 2.033299 AGACAGTGCAAATTGTGGAACG 59.967 45.455 4.67 0.00 42.39 3.95
67 68 1.007964 TGCAAATTGTGGAACGCCG 60.008 52.632 0.00 0.00 42.39 6.46
68 69 2.371923 GCAAATTGTGGAACGCCGC 61.372 57.895 0.00 0.00 42.39 6.53
69 70 1.732683 CAAATTGTGGAACGCCGCC 60.733 57.895 0.00 0.00 44.26 6.13
70 71 2.926420 AAATTGTGGAACGCCGCCC 61.926 57.895 0.00 0.00 44.26 6.13
71 72 4.652131 ATTGTGGAACGCCGCCCA 62.652 61.111 0.00 0.00 44.26 5.36
72 73 4.877619 TTGTGGAACGCCGCCCAA 62.878 61.111 0.20 0.00 44.26 4.12
73 74 4.877619 TGTGGAACGCCGCCCAAA 62.878 61.111 0.20 0.00 44.26 3.28
74 75 3.597728 GTGGAACGCCGCCCAAAA 61.598 61.111 0.20 0.00 38.80 2.44
75 76 2.833582 TGGAACGCCGCCCAAAAA 60.834 55.556 0.00 0.00 36.79 1.94
95 96 6.981762 AAAAACAGACAATGCAAATTGTGA 57.018 29.167 10.33 0.00 44.02 3.58
96 97 6.981762 AAAACAGACAATGCAAATTGTGAA 57.018 29.167 10.33 0.00 44.02 3.18
97 98 6.592798 AAACAGACAATGCAAATTGTGAAG 57.407 33.333 10.33 3.23 44.02 3.02
99 100 3.120616 CAGACAATGCAAATTGTGAAGCG 59.879 43.478 10.33 0.00 44.02 4.68
101 102 1.062258 AATGCAAATTGTGAAGCGCG 58.938 45.000 0.00 0.00 0.00 6.86
102 103 1.346378 ATGCAAATTGTGAAGCGCGC 61.346 50.000 26.66 26.66 0.00 6.86
103 104 2.015627 GCAAATTGTGAAGCGCGCA 61.016 52.632 35.10 12.17 34.64 6.09
104 105 1.768603 CAAATTGTGAAGCGCGCAC 59.231 52.632 35.10 25.80 36.59 5.34
105 106 0.933973 CAAATTGTGAAGCGCGCACA 60.934 50.000 35.10 27.40 43.89 4.57
108 109 2.555782 TGTGAAGCGCGCACAATC 59.444 55.556 35.10 23.99 42.75 2.67
109 110 2.202349 GTGAAGCGCGCACAATCC 60.202 61.111 35.10 16.29 36.31 3.01
110 111 3.787676 TGAAGCGCGCACAATCCG 61.788 61.111 35.10 0.00 0.00 4.18
111 112 3.487202 GAAGCGCGCACAATCCGA 61.487 61.111 35.10 0.00 0.00 4.55
115 116 4.596180 CGCGCACAATCCGATGCC 62.596 66.667 8.75 0.00 38.69 4.40
116 117 4.256090 GCGCACAATCCGATGCCC 62.256 66.667 0.30 0.00 38.69 5.36
117 118 3.585990 CGCACAATCCGATGCCCC 61.586 66.667 0.00 0.00 38.69 5.80
118 119 2.440065 GCACAATCCGATGCCCCA 60.440 61.111 0.00 0.00 35.73 4.96
121 122 1.887956 GCACAATCCGATGCCCCATAT 60.888 52.381 0.00 0.00 35.73 1.78
122 123 2.617788 GCACAATCCGATGCCCCATATA 60.618 50.000 0.00 0.00 35.73 0.86
123 124 3.889815 CACAATCCGATGCCCCATATAT 58.110 45.455 0.00 0.00 0.00 0.86
124 125 3.628942 CACAATCCGATGCCCCATATATG 59.371 47.826 5.68 5.68 0.00 1.78
125 126 2.620115 CAATCCGATGCCCCATATATGC 59.380 50.000 7.24 0.00 0.00 3.14
127 128 1.210234 TCCGATGCCCCATATATGCTG 59.790 52.381 7.24 1.64 0.00 4.41
128 129 1.019673 CGATGCCCCATATATGCTGC 58.980 55.000 7.24 11.59 0.00 5.25
130 131 1.033746 ATGCCCCATATATGCTGCGC 61.034 55.000 7.24 0.00 0.00 6.09
131 132 1.675310 GCCCCATATATGCTGCGCA 60.675 57.895 10.98 10.98 44.86 6.09
132 133 1.926511 GCCCCATATATGCTGCGCAC 61.927 60.000 5.66 4.25 43.04 5.34
133 134 1.638388 CCCCATATATGCTGCGCACG 61.638 60.000 5.66 3.93 43.04 5.34
134 135 0.670239 CCCATATATGCTGCGCACGA 60.670 55.000 5.66 0.00 43.04 4.35
136 137 2.539476 CCATATATGCTGCGCACGATA 58.461 47.619 5.66 5.99 43.04 2.92
137 138 2.537214 CCATATATGCTGCGCACGATAG 59.463 50.000 5.66 0.00 43.04 2.08
138 139 1.629013 TATATGCTGCGCACGATAGC 58.371 50.000 5.66 9.17 43.04 2.97
147 148 3.498840 GCACGATAGCGCTTTTCAG 57.501 52.632 18.68 11.93 41.89 3.02
148 149 0.587489 GCACGATAGCGCTTTTCAGC 60.587 55.000 18.68 15.68 41.89 4.26
165 166 2.656973 CGCGCGCCCAAAAACTTT 60.657 55.556 27.72 0.00 0.00 2.66
166 167 2.234335 CGCGCGCCCAAAAACTTTT 61.234 52.632 27.72 0.00 0.00 2.27
167 168 0.935366 CGCGCGCCCAAAAACTTTTA 60.935 50.000 27.72 0.00 0.00 1.52
168 169 0.781787 GCGCGCCCAAAAACTTTTAG 59.218 50.000 23.24 0.00 0.00 1.85
169 170 0.781787 CGCGCCCAAAAACTTTTAGC 59.218 50.000 0.00 0.00 0.00 3.09
170 171 1.859383 GCGCCCAAAAACTTTTAGCA 58.141 45.000 0.00 0.00 31.67 3.49
171 172 1.525197 GCGCCCAAAAACTTTTAGCAC 59.475 47.619 0.00 0.00 31.67 4.40
173 174 3.551250 GCGCCCAAAAACTTTTAGCACTA 60.551 43.478 0.00 0.00 31.67 2.74
174 175 3.978855 CGCCCAAAAACTTTTAGCACTAC 59.021 43.478 8.82 0.00 31.67 2.73
175 176 4.498345 CGCCCAAAAACTTTTAGCACTACA 60.498 41.667 8.82 0.00 31.67 2.74
177 178 4.982295 CCCAAAAACTTTTAGCACTACAGC 59.018 41.667 0.00 0.00 0.00 4.40
179 180 5.458779 CCAAAAACTTTTAGCACTACAGCAC 59.541 40.000 0.00 0.00 36.85 4.40
180 181 6.265577 CAAAAACTTTTAGCACTACAGCACT 58.734 36.000 0.00 0.00 36.85 4.40
181 182 5.424121 AAACTTTTAGCACTACAGCACTG 57.576 39.130 0.00 0.00 36.85 3.66
183 184 2.839486 TTTAGCACTACAGCACTGCT 57.161 45.000 0.00 0.00 43.67 4.24
196 197 3.867771 CTGCTGAAGCTGTCCGAC 58.132 61.111 3.61 0.00 42.66 4.79
198 199 2.049063 GCTGAAGCTGTCCGACGT 60.049 61.111 0.00 0.00 38.21 4.34
199 200 1.211969 GCTGAAGCTGTCCGACGTA 59.788 57.895 0.00 0.00 38.21 3.57
200 201 0.388134 GCTGAAGCTGTCCGACGTAA 60.388 55.000 0.00 0.00 38.21 3.18
201 202 1.933500 GCTGAAGCTGTCCGACGTAAA 60.934 52.381 0.00 0.00 38.21 2.01
202 203 2.400399 CTGAAGCTGTCCGACGTAAAA 58.600 47.619 0.00 0.00 0.00 1.52
203 204 2.798283 CTGAAGCTGTCCGACGTAAAAA 59.202 45.455 0.00 0.00 0.00 1.94
226 227 7.331792 AAAAACAAAATTTTAGTACGCGAAGC 58.668 30.769 15.93 1.54 39.56 3.86
227 228 7.009357 AAAAACAAAATTTTAGTACGCGAAGCA 59.991 29.630 15.93 0.00 41.68 3.91
249 250 1.098869 TTTTGTGCGCCTGTTGAAGA 58.901 45.000 4.18 0.00 0.00 2.87
250 251 1.317613 TTTGTGCGCCTGTTGAAGAT 58.682 45.000 4.18 0.00 0.00 2.40
251 252 0.592637 TTGTGCGCCTGTTGAAGATG 59.407 50.000 4.18 0.00 0.00 2.90
254 255 1.300971 TGCGCCTGTTGAAGATGCTC 61.301 55.000 4.18 0.00 0.00 4.26
257 258 1.673923 CGCCTGTTGAAGATGCTCTGA 60.674 52.381 0.00 0.00 0.00 3.27
297 300 1.336440 TCACATGCGGGTTTGTTTCTG 59.664 47.619 0.00 0.00 0.00 3.02
308 311 4.381185 GGGTTTGTTTCTGGTTTTCGTTCT 60.381 41.667 0.00 0.00 0.00 3.01
310 313 4.625972 TTGTTTCTGGTTTTCGTTCTCC 57.374 40.909 0.00 0.00 0.00 3.71
340 343 2.159382 CCAGCCAGTTTCCGTATTGTT 58.841 47.619 0.00 0.00 0.00 2.83
341 344 3.340034 CCAGCCAGTTTCCGTATTGTTA 58.660 45.455 0.00 0.00 0.00 2.41
343 346 4.398044 CCAGCCAGTTTCCGTATTGTTATT 59.602 41.667 0.00 0.00 0.00 1.40
348 351 6.128117 GCCAGTTTCCGTATTGTTATTTCTCA 60.128 38.462 0.00 0.00 0.00 3.27
362 370 0.034380 TTCTCATCGTCGGTCCCTCT 60.034 55.000 0.00 0.00 0.00 3.69
382 390 6.054295 CCTCTTACTGAAATCATTGGAGGAG 58.946 44.000 13.86 4.07 39.87 3.69
384 392 6.644347 TCTTACTGAAATCATTGGAGGAGAC 58.356 40.000 0.00 0.00 0.00 3.36
449 457 1.070786 CACAAGGCACCGTACACCT 59.929 57.895 0.00 0.00 34.45 4.00
451 459 4.792087 AAGGCACCGTACACCTTG 57.208 55.556 5.85 0.00 42.21 3.61
480 488 4.595762 TTCTAACAAGTACGGCTGACTT 57.404 40.909 0.00 1.82 37.64 3.01
564 581 3.452990 TGTACTCCAAGTCTCCAACAACA 59.547 43.478 0.00 0.00 0.00 3.33
565 582 3.644966 ACTCCAAGTCTCCAACAACAA 57.355 42.857 0.00 0.00 0.00 2.83
567 584 3.278574 CTCCAAGTCTCCAACAACAACA 58.721 45.455 0.00 0.00 0.00 3.33
578 595 6.262273 TCTCCAACAACAACAGGAAGATAAAC 59.738 38.462 0.00 0.00 0.00 2.01
579 596 5.888724 TCCAACAACAACAGGAAGATAAACA 59.111 36.000 0.00 0.00 0.00 2.83
581 598 7.069331 TCCAACAACAACAGGAAGATAAACATT 59.931 33.333 0.00 0.00 0.00 2.71
582 599 7.710475 CCAACAACAACAGGAAGATAAACATTT 59.290 33.333 0.00 0.00 0.00 2.32
583 600 8.755018 CAACAACAACAGGAAGATAAACATTTC 58.245 33.333 0.00 0.00 0.00 2.17
584 601 8.237811 ACAACAACAGGAAGATAAACATTTCT 57.762 30.769 0.00 0.00 0.00 2.52
585 602 8.695456 ACAACAACAGGAAGATAAACATTTCTT 58.305 29.630 0.00 0.00 34.95 2.52
586 603 9.533253 CAACAACAGGAAGATAAACATTTCTTT 57.467 29.630 0.00 0.00 32.46 2.52
636 653 3.108289 CGTGACTGTGCAGGAGCG 61.108 66.667 4.11 1.49 46.23 5.03
744 801 1.604378 CACCCACTGATCCACCCTC 59.396 63.158 0.00 0.00 0.00 4.30
749 806 1.616628 ACTGATCCACCCTCCACCC 60.617 63.158 0.00 0.00 0.00 4.61
750 807 1.307343 CTGATCCACCCTCCACCCT 60.307 63.158 0.00 0.00 0.00 4.34
751 808 1.306997 TGATCCACCCTCCACCCTC 60.307 63.158 0.00 0.00 0.00 4.30
794 851 1.595929 GGCGACTGACCACCGAAAA 60.596 57.895 0.00 0.00 0.00 2.29
1051 1121 2.109774 AGATTCCAGACTCCAGAGCAG 58.890 52.381 0.00 0.00 0.00 4.24
1060 1130 1.141657 ACTCCAGAGCAGCAGTTTCAA 59.858 47.619 0.00 0.00 0.00 2.69
1082 1152 2.032178 GCTGAGTTGAGCGTTTTTCAGT 59.968 45.455 10.68 0.00 35.63 3.41
1135 2749 1.140804 GGAGCACGAGAAGAGGCTC 59.859 63.158 6.34 6.34 44.15 4.70
1183 2803 4.475135 GAGGAGGCGTCCAAGGGC 62.475 72.222 26.40 7.27 46.80 5.19
1185 2805 4.344865 GGAGGCGTCCAAGGGCAA 62.345 66.667 20.47 0.00 43.31 4.52
1371 2991 5.871524 TCTCTGCTTGATGAGTGTGAATTAC 59.128 40.000 0.00 0.00 0.00 1.89
1464 3089 1.515081 TAACCGTGTGCTTTACTGGC 58.485 50.000 0.00 0.00 0.00 4.85
1490 3115 5.065988 TGCAACAAGGAAGAAGTGTACTTTC 59.934 40.000 0.00 0.00 36.11 2.62
1512 3137 2.485426 TGTACTGCTGCTCTTCATTTGC 59.515 45.455 0.00 0.00 0.00 3.68
1577 3879 1.441729 GGCCGATCGACCAGAATCA 59.558 57.895 18.66 0.00 0.00 2.57
1593 3895 1.916738 TCACAAACCGGTGACCCTT 59.083 52.632 8.52 0.00 42.56 3.95
1597 3899 0.466555 CAAACCGGTGACCCTTGGAA 60.467 55.000 8.52 0.00 0.00 3.53
1870 5293 5.481200 TCGTTGACTTCGATAACTCCTAG 57.519 43.478 0.00 0.00 32.30 3.02
2113 6211 4.038763 ACGATCCGAGCCTTAACAATCATA 59.961 41.667 0.00 0.00 0.00 2.15
2127 6225 4.770795 ACAATCATAAGCCTTAACGAGCT 58.229 39.130 0.00 0.00 42.40 4.09
2149 6247 4.270834 TGAGTCTTAATGAGCCGAGTAGT 58.729 43.478 0.00 0.00 0.00 2.73
2173 6271 1.335145 TAGCCCAGCCCTATTCGTAC 58.665 55.000 0.00 0.00 0.00 3.67
2174 6272 1.300697 GCCCAGCCCTATTCGTACG 60.301 63.158 9.53 9.53 0.00 3.67
2175 6273 1.741327 GCCCAGCCCTATTCGTACGA 61.741 60.000 15.28 15.28 0.00 3.43
2176 6274 0.031721 CCCAGCCCTATTCGTACGAC 59.968 60.000 19.36 5.25 0.00 4.34
2177 6275 1.030457 CCAGCCCTATTCGTACGACT 58.970 55.000 19.36 15.80 0.00 4.18
2178 6276 1.001597 CCAGCCCTATTCGTACGACTC 60.002 57.143 19.36 0.46 0.00 3.36
2179 6277 0.942962 AGCCCTATTCGTACGACTCG 59.057 55.000 19.36 8.86 0.00 4.18
2180 6278 0.040603 GCCCTATTCGTACGACTCGG 60.041 60.000 19.36 17.59 0.00 4.63
2181 6279 1.303309 CCCTATTCGTACGACTCGGT 58.697 55.000 19.36 4.61 0.00 4.69
2182 6280 1.003116 CCCTATTCGTACGACTCGGTG 60.003 57.143 19.36 8.56 0.00 4.94
2183 6281 1.935873 CCTATTCGTACGACTCGGTGA 59.064 52.381 19.36 1.03 0.00 4.02
2184 6282 2.547211 CCTATTCGTACGACTCGGTGAT 59.453 50.000 19.36 9.49 0.00 3.06
2185 6283 2.752144 ATTCGTACGACTCGGTGATC 57.248 50.000 19.36 0.00 0.00 2.92
2186 6284 0.371301 TTCGTACGACTCGGTGATCG 59.629 55.000 19.36 0.00 43.97 3.69
2187 6285 0.458370 TCGTACGACTCGGTGATCGA 60.458 55.000 15.28 0.00 46.77 3.59
2210 6308 0.108567 AAAAACAACCCCGTGTGTGC 60.109 50.000 0.00 0.00 0.00 4.57
2211 6309 1.950973 AAAACAACCCCGTGTGTGCC 61.951 55.000 0.00 0.00 0.00 5.01
2214 6312 4.922026 AACCCCGTGTGTGCCGTC 62.922 66.667 0.00 0.00 0.00 4.79
2218 6316 4.619227 CCGTGTGTGCCGTCCCTT 62.619 66.667 0.00 0.00 0.00 3.95
2219 6317 2.590575 CGTGTGTGCCGTCCCTTT 60.591 61.111 0.00 0.00 0.00 3.11
2220 6318 2.604174 CGTGTGTGCCGTCCCTTTC 61.604 63.158 0.00 0.00 0.00 2.62
2221 6319 2.112297 TGTGTGCCGTCCCTTTCC 59.888 61.111 0.00 0.00 0.00 3.13
2222 6320 2.112297 GTGTGCCGTCCCTTTCCA 59.888 61.111 0.00 0.00 0.00 3.53
2223 6321 1.303317 GTGTGCCGTCCCTTTCCAT 60.303 57.895 0.00 0.00 0.00 3.41
2224 6322 1.303236 TGTGCCGTCCCTTTCCATG 60.303 57.895 0.00 0.00 0.00 3.66
2225 6323 2.046285 GTGCCGTCCCTTTCCATGG 61.046 63.158 4.97 4.97 0.00 3.66
2226 6324 2.227757 TGCCGTCCCTTTCCATGGA 61.228 57.895 11.44 11.44 0.00 3.41
2227 6325 1.227383 GCCGTCCCTTTCCATGGAT 59.773 57.895 17.06 0.00 32.20 3.41
2228 6326 0.395724 GCCGTCCCTTTCCATGGATT 60.396 55.000 17.06 0.00 32.20 3.01
2229 6327 1.392589 CCGTCCCTTTCCATGGATTG 58.607 55.000 17.06 11.23 32.20 2.67
2230 6328 0.740737 CGTCCCTTTCCATGGATTGC 59.259 55.000 17.06 2.47 32.20 3.56
2231 6329 0.740737 GTCCCTTTCCATGGATTGCG 59.259 55.000 17.06 4.16 32.20 4.85
2232 6330 1.037030 TCCCTTTCCATGGATTGCGC 61.037 55.000 17.06 0.00 0.00 6.09
2233 6331 1.064621 CCTTTCCATGGATTGCGCG 59.935 57.895 17.06 0.00 0.00 6.86
2234 6332 1.656818 CCTTTCCATGGATTGCGCGT 61.657 55.000 17.06 0.00 0.00 6.01
2235 6333 0.523968 CTTTCCATGGATTGCGCGTG 60.524 55.000 17.06 0.00 0.00 5.34
2236 6334 1.932011 TTTCCATGGATTGCGCGTGG 61.932 55.000 17.06 5.53 0.00 4.94
2237 6335 2.811542 TTCCATGGATTGCGCGTGGA 62.812 55.000 17.06 8.26 37.20 4.02
2238 6336 2.405805 CCATGGATTGCGCGTGGAA 61.406 57.895 5.56 5.09 31.59 3.53
2239 6337 1.505807 CATGGATTGCGCGTGGAAA 59.494 52.632 7.09 0.00 0.00 3.13
2240 6338 0.101040 CATGGATTGCGCGTGGAAAT 59.899 50.000 7.09 2.93 0.00 2.17
2241 6339 1.333308 CATGGATTGCGCGTGGAAATA 59.667 47.619 7.09 0.00 0.00 1.40
2242 6340 1.013596 TGGATTGCGCGTGGAAATAG 58.986 50.000 7.09 0.00 0.00 1.73
2243 6341 0.317020 GGATTGCGCGTGGAAATAGC 60.317 55.000 7.09 0.00 0.00 2.97
2244 6342 0.657840 GATTGCGCGTGGAAATAGCT 59.342 50.000 7.09 0.00 0.00 3.32
2245 6343 1.864711 GATTGCGCGTGGAAATAGCTA 59.135 47.619 7.09 0.00 0.00 3.32
2246 6344 1.728068 TTGCGCGTGGAAATAGCTAA 58.272 45.000 8.43 0.00 0.00 3.09
2247 6345 1.003851 TGCGCGTGGAAATAGCTAAC 58.996 50.000 8.43 0.00 0.00 2.34
2248 6346 0.303796 GCGCGTGGAAATAGCTAACC 59.696 55.000 8.43 2.76 0.00 2.85
2249 6347 1.935933 CGCGTGGAAATAGCTAACCT 58.064 50.000 0.00 0.00 0.00 3.50
2250 6348 1.593006 CGCGTGGAAATAGCTAACCTG 59.407 52.381 0.00 1.31 0.00 4.00
2251 6349 1.330829 GCGTGGAAATAGCTAACCTGC 59.669 52.381 0.00 7.17 0.00 4.85
2252 6350 1.593006 CGTGGAAATAGCTAACCTGCG 59.407 52.381 0.00 7.59 38.13 5.18
2253 6351 1.940613 GTGGAAATAGCTAACCTGCGG 59.059 52.381 0.00 0.00 38.13 5.69
2254 6352 0.945099 GGAAATAGCTAACCTGCGGC 59.055 55.000 0.00 0.00 38.13 6.53
2255 6353 0.945099 GAAATAGCTAACCTGCGGCC 59.055 55.000 0.00 0.00 38.13 6.13
2256 6354 0.254747 AAATAGCTAACCTGCGGCCA 59.745 50.000 2.24 0.00 38.13 5.36
2257 6355 0.474184 AATAGCTAACCTGCGGCCAT 59.526 50.000 2.24 0.00 38.13 4.40
2258 6356 0.250467 ATAGCTAACCTGCGGCCATG 60.250 55.000 2.24 0.00 38.13 3.66
2259 6357 1.622607 TAGCTAACCTGCGGCCATGT 61.623 55.000 2.24 0.00 38.13 3.21
2260 6358 2.472909 GCTAACCTGCGGCCATGTC 61.473 63.158 2.24 0.00 0.00 3.06
2261 6359 1.819632 CTAACCTGCGGCCATGTCC 60.820 63.158 2.24 0.00 0.00 4.02
2280 6378 4.635769 CCTCACGGGCAATGCTAA 57.364 55.556 4.82 0.00 0.00 3.09
2281 6379 2.866872 CCTCACGGGCAATGCTAAA 58.133 52.632 4.82 0.00 0.00 1.85
2282 6380 0.451783 CCTCACGGGCAATGCTAAAC 59.548 55.000 4.82 0.00 0.00 2.01
2283 6381 0.451783 CTCACGGGCAATGCTAAACC 59.548 55.000 4.82 0.00 0.00 3.27
2284 6382 0.037590 TCACGGGCAATGCTAAACCT 59.962 50.000 4.82 0.00 0.00 3.50
2285 6383 1.279558 TCACGGGCAATGCTAAACCTA 59.720 47.619 4.82 0.00 0.00 3.08
2286 6384 1.400494 CACGGGCAATGCTAAACCTAC 59.600 52.381 4.82 0.00 0.00 3.18
2287 6385 0.655733 CGGGCAATGCTAAACCTACG 59.344 55.000 4.82 0.00 0.00 3.51
2288 6386 1.746470 GGGCAATGCTAAACCTACGT 58.254 50.000 4.82 0.00 0.00 3.57
2289 6387 2.739287 CGGGCAATGCTAAACCTACGTA 60.739 50.000 4.82 0.00 0.00 3.57
2290 6388 3.272581 GGGCAATGCTAAACCTACGTAA 58.727 45.455 4.82 0.00 0.00 3.18
2291 6389 3.881089 GGGCAATGCTAAACCTACGTAAT 59.119 43.478 4.82 0.00 0.00 1.89
2292 6390 5.058490 GGGCAATGCTAAACCTACGTAATA 58.942 41.667 4.82 0.00 0.00 0.98
2293 6391 5.049886 GGGCAATGCTAAACCTACGTAATAC 60.050 44.000 4.82 0.00 0.00 1.89
2294 6392 5.756833 GGCAATGCTAAACCTACGTAATACT 59.243 40.000 4.82 0.00 0.00 2.12
2295 6393 6.259387 GGCAATGCTAAACCTACGTAATACTT 59.741 38.462 4.82 0.00 0.00 2.24
2296 6394 7.123830 GCAATGCTAAACCTACGTAATACTTG 58.876 38.462 0.00 0.00 0.00 3.16
2297 6395 7.201582 GCAATGCTAAACCTACGTAATACTTGT 60.202 37.037 0.00 0.00 0.00 3.16
2298 6396 8.662141 CAATGCTAAACCTACGTAATACTTGTT 58.338 33.333 0.00 0.00 0.00 2.83
2299 6397 8.782339 ATGCTAAACCTACGTAATACTTGTTT 57.218 30.769 0.00 3.15 0.00 2.83
2300 6398 9.874205 ATGCTAAACCTACGTAATACTTGTTTA 57.126 29.630 0.00 4.04 0.00 2.01
2301 6399 9.874205 TGCTAAACCTACGTAATACTTGTTTAT 57.126 29.630 0.00 0.00 0.00 1.40
2305 6403 7.529880 ACCTACGTAATACTTGTTTATGTGC 57.470 36.000 0.00 0.00 32.51 4.57
2306 6404 7.325694 ACCTACGTAATACTTGTTTATGTGCT 58.674 34.615 0.00 0.00 32.51 4.40
2307 6405 7.490402 ACCTACGTAATACTTGTTTATGTGCTC 59.510 37.037 0.00 0.00 32.51 4.26
2308 6406 7.705325 CCTACGTAATACTTGTTTATGTGCTCT 59.295 37.037 0.00 0.00 32.51 4.09
2309 6407 9.726232 CTACGTAATACTTGTTTATGTGCTCTA 57.274 33.333 0.00 0.00 32.51 2.43
2310 6408 8.991243 ACGTAATACTTGTTTATGTGCTCTAA 57.009 30.769 0.00 0.00 29.79 2.10
2311 6409 9.084164 ACGTAATACTTGTTTATGTGCTCTAAG 57.916 33.333 0.00 0.00 29.79 2.18
2312 6410 9.084164 CGTAATACTTGTTTATGTGCTCTAAGT 57.916 33.333 0.00 0.00 0.00 2.24
2319 6417 9.922305 CTTGTTTATGTGCTCTAAGTAAATAGC 57.078 33.333 0.00 0.00 35.51 2.97
2320 6418 9.443323 TTGTTTATGTGCTCTAAGTAAATAGCA 57.557 29.630 0.00 0.00 42.41 3.49
2321 6419 9.443323 TGTTTATGTGCTCTAAGTAAATAGCAA 57.557 29.630 0.00 0.00 45.81 3.91
2322 6420 9.704098 GTTTATGTGCTCTAAGTAAATAGCAAC 57.296 33.333 0.00 0.00 45.81 4.17
2323 6421 6.589830 ATGTGCTCTAAGTAAATAGCAACG 57.410 37.500 0.00 0.00 45.81 4.10
2324 6422 5.475719 TGTGCTCTAAGTAAATAGCAACGT 58.524 37.500 0.00 0.00 45.81 3.99
2325 6423 5.347635 TGTGCTCTAAGTAAATAGCAACGTG 59.652 40.000 0.00 0.00 45.81 4.49
2326 6424 4.868171 TGCTCTAAGTAAATAGCAACGTGG 59.132 41.667 0.00 0.00 41.74 4.94
2327 6425 5.107133 GCTCTAAGTAAATAGCAACGTGGA 58.893 41.667 0.00 0.00 35.05 4.02
2328 6426 5.232414 GCTCTAAGTAAATAGCAACGTGGAG 59.768 44.000 0.00 0.00 36.36 3.86
2329 6427 5.107133 TCTAAGTAAATAGCAACGTGGAGC 58.893 41.667 0.00 0.00 0.00 4.70
2341 6439 2.572191 CGTGGAGCGTTATTACTGGA 57.428 50.000 0.00 0.00 35.54 3.86
2342 6440 3.093717 CGTGGAGCGTTATTACTGGAT 57.906 47.619 0.00 0.00 35.54 3.41
2343 6441 3.050619 CGTGGAGCGTTATTACTGGATC 58.949 50.000 0.00 0.00 35.54 3.36
2344 6442 3.490249 CGTGGAGCGTTATTACTGGATCA 60.490 47.826 0.00 0.00 35.54 2.92
2345 6443 4.632153 GTGGAGCGTTATTACTGGATCAT 58.368 43.478 0.00 0.00 0.00 2.45
2346 6444 5.057149 GTGGAGCGTTATTACTGGATCATT 58.943 41.667 0.00 0.00 0.00 2.57
2347 6445 6.220930 GTGGAGCGTTATTACTGGATCATTA 58.779 40.000 0.00 0.00 0.00 1.90
2348 6446 6.366332 GTGGAGCGTTATTACTGGATCATTAG 59.634 42.308 0.00 0.00 0.00 1.73
2349 6447 5.869888 GGAGCGTTATTACTGGATCATTAGG 59.130 44.000 0.00 0.00 0.00 2.69
2350 6448 5.238583 AGCGTTATTACTGGATCATTAGGC 58.761 41.667 0.00 0.00 0.00 3.93
2351 6449 4.091509 GCGTTATTACTGGATCATTAGGCG 59.908 45.833 0.00 0.00 0.00 5.52
2352 6450 4.625742 CGTTATTACTGGATCATTAGGCGG 59.374 45.833 0.00 0.00 0.00 6.13
2353 6451 3.703001 ATTACTGGATCATTAGGCGGG 57.297 47.619 0.00 0.00 0.00 6.13
2354 6452 2.391926 TACTGGATCATTAGGCGGGA 57.608 50.000 0.00 0.00 0.00 5.14
2355 6453 1.507140 ACTGGATCATTAGGCGGGAA 58.493 50.000 0.00 0.00 0.00 3.97
2356 6454 1.417890 ACTGGATCATTAGGCGGGAAG 59.582 52.381 0.00 0.00 0.00 3.46
2357 6455 0.764890 TGGATCATTAGGCGGGAAGG 59.235 55.000 0.00 0.00 0.00 3.46
2358 6456 0.036875 GGATCATTAGGCGGGAAGGG 59.963 60.000 0.00 0.00 0.00 3.95
2359 6457 0.036875 GATCATTAGGCGGGAAGGGG 59.963 60.000 0.00 0.00 0.00 4.79
2360 6458 2.069165 ATCATTAGGCGGGAAGGGGC 62.069 60.000 0.00 0.00 0.00 5.80
2370 6468 3.672503 GAAGGGGCCCACCACCAT 61.673 66.667 27.72 0.00 42.21 3.55
2371 6469 3.963124 GAAGGGGCCCACCACCATG 62.963 68.421 27.72 0.00 42.21 3.66
2373 6471 3.991318 GGGGCCCACCACCATGAA 61.991 66.667 26.86 0.00 42.91 2.57
2374 6472 2.119391 GGGCCCACCACCATGAAA 59.881 61.111 19.95 0.00 39.85 2.69
2375 6473 1.535202 GGGCCCACCACCATGAAAA 60.535 57.895 19.95 0.00 39.85 2.29
2376 6474 0.909133 GGGCCCACCACCATGAAAAT 60.909 55.000 19.95 0.00 39.85 1.82
2377 6475 0.249955 GGCCCACCACCATGAAAATG 59.750 55.000 0.00 0.00 35.26 2.32
2378 6476 0.975887 GCCCACCACCATGAAAATGT 59.024 50.000 0.00 0.00 0.00 2.71
2379 6477 1.338011 GCCCACCACCATGAAAATGTG 60.338 52.381 0.00 0.00 0.00 3.21
2380 6478 1.969923 CCCACCACCATGAAAATGTGT 59.030 47.619 0.00 0.00 0.00 3.72
2381 6479 2.288948 CCCACCACCATGAAAATGTGTG 60.289 50.000 0.00 0.00 0.00 3.82
2382 6480 2.364970 CCACCACCATGAAAATGTGTGT 59.635 45.455 0.00 0.00 0.00 3.72
2383 6481 3.382855 CACCACCATGAAAATGTGTGTG 58.617 45.455 0.00 0.94 0.00 3.82
2384 6482 3.030291 ACCACCATGAAAATGTGTGTGT 58.970 40.909 0.00 0.00 0.00 3.72
2385 6483 3.450457 ACCACCATGAAAATGTGTGTGTT 59.550 39.130 0.00 0.00 0.00 3.32
2386 6484 4.081198 ACCACCATGAAAATGTGTGTGTTT 60.081 37.500 0.00 0.00 0.00 2.83
2387 6485 4.874966 CCACCATGAAAATGTGTGTGTTTT 59.125 37.500 0.00 0.00 0.00 2.43
2388 6486 5.353678 CCACCATGAAAATGTGTGTGTTTTT 59.646 36.000 0.00 0.00 0.00 1.94
2406 6504 2.387007 TTTTGGGGAGGGGGATTAGA 57.613 50.000 0.00 0.00 0.00 2.10
2407 6505 1.603634 TTTGGGGAGGGGGATTAGAC 58.396 55.000 0.00 0.00 0.00 2.59
2408 6506 0.423956 TTGGGGAGGGGGATTAGACA 59.576 55.000 0.00 0.00 0.00 3.41
2409 6507 0.030092 TGGGGAGGGGGATTAGACAG 60.030 60.000 0.00 0.00 0.00 3.51
2410 6508 0.267960 GGGGAGGGGGATTAGACAGA 59.732 60.000 0.00 0.00 0.00 3.41
2411 6509 1.425694 GGGAGGGGGATTAGACAGAC 58.574 60.000 0.00 0.00 0.00 3.51
2412 6510 1.344087 GGGAGGGGGATTAGACAGACA 60.344 57.143 0.00 0.00 0.00 3.41
2413 6511 2.695585 GGAGGGGGATTAGACAGACAT 58.304 52.381 0.00 0.00 0.00 3.06
2414 6512 2.370189 GGAGGGGGATTAGACAGACATG 59.630 54.545 0.00 0.00 0.00 3.21
2415 6513 3.041946 GAGGGGGATTAGACAGACATGT 58.958 50.000 0.00 0.00 44.31 3.21
2416 6514 3.456277 GAGGGGGATTAGACAGACATGTT 59.544 47.826 0.00 0.00 40.68 2.71
2417 6515 4.631234 AGGGGGATTAGACAGACATGTTA 58.369 43.478 0.00 0.00 40.68 2.41
2418 6516 5.227593 AGGGGGATTAGACAGACATGTTAT 58.772 41.667 0.00 0.00 40.68 1.89
2419 6517 6.390504 AGGGGGATTAGACAGACATGTTATA 58.609 40.000 0.00 0.00 40.68 0.98
2420 6518 7.025620 AGGGGGATTAGACAGACATGTTATAT 58.974 38.462 0.00 0.00 40.68 0.86
2421 6519 8.184249 AGGGGGATTAGACAGACATGTTATATA 58.816 37.037 0.00 0.00 40.68 0.86
2422 6520 8.478877 GGGGGATTAGACAGACATGTTATATAG 58.521 40.741 0.00 0.00 40.68 1.31
2423 6521 8.478877 GGGGATTAGACAGACATGTTATATAGG 58.521 40.741 0.00 0.00 40.68 2.57
2424 6522 9.036980 GGGATTAGACAGACATGTTATATAGGT 57.963 37.037 0.00 0.00 40.68 3.08
2429 6527 7.877003 AGACAGACATGTTATATAGGTCTTCG 58.123 38.462 0.00 0.00 40.68 3.79
2430 6528 7.502895 AGACAGACATGTTATATAGGTCTTCGT 59.497 37.037 0.00 0.76 40.68 3.85
2431 6529 8.687292 ACAGACATGTTATATAGGTCTTCGTA 57.313 34.615 0.00 0.00 35.63 3.43
2432 6530 8.784994 ACAGACATGTTATATAGGTCTTCGTAG 58.215 37.037 0.00 0.00 35.63 3.51
2433 6531 8.237949 CAGACATGTTATATAGGTCTTCGTAGG 58.762 40.741 0.00 0.00 36.74 3.18
2434 6532 7.393796 AGACATGTTATATAGGTCTTCGTAGGG 59.606 40.741 0.00 0.00 35.41 3.53
2435 6533 6.436532 ACATGTTATATAGGTCTTCGTAGGGG 59.563 42.308 0.00 0.00 0.00 4.79
2436 6534 5.327732 TGTTATATAGGTCTTCGTAGGGGG 58.672 45.833 0.00 0.00 0.00 5.40
2437 6535 5.162947 TGTTATATAGGTCTTCGTAGGGGGT 60.163 44.000 0.00 0.00 0.00 4.95
2438 6536 2.862850 ATAGGTCTTCGTAGGGGGTT 57.137 50.000 0.00 0.00 0.00 4.11
2439 6537 2.149973 TAGGTCTTCGTAGGGGGTTC 57.850 55.000 0.00 0.00 0.00 3.62
2440 6538 0.616964 AGGTCTTCGTAGGGGGTTCC 60.617 60.000 0.00 0.00 0.00 3.62
2441 6539 1.514553 GTCTTCGTAGGGGGTTCCG 59.485 63.158 0.00 0.00 41.52 4.30
2442 6540 1.077265 TCTTCGTAGGGGGTTCCGT 59.923 57.895 0.00 0.00 41.52 4.69
2443 6541 0.331278 TCTTCGTAGGGGGTTCCGTA 59.669 55.000 0.00 0.00 41.52 4.02
2444 6542 0.743097 CTTCGTAGGGGGTTCCGTAG 59.257 60.000 0.00 0.00 41.52 3.51
2445 6543 0.331278 TTCGTAGGGGGTTCCGTAGA 59.669 55.000 0.00 0.00 41.52 2.59
2446 6544 0.552848 TCGTAGGGGGTTCCGTAGAT 59.447 55.000 0.00 0.00 41.52 1.98
2447 6545 0.672342 CGTAGGGGGTTCCGTAGATG 59.328 60.000 0.00 0.00 41.52 2.90
2448 6546 1.785647 GTAGGGGGTTCCGTAGATGT 58.214 55.000 0.00 0.00 41.52 3.06
2449 6547 2.749466 CGTAGGGGGTTCCGTAGATGTA 60.749 54.545 0.00 0.00 41.52 2.29
2450 6548 2.083628 AGGGGGTTCCGTAGATGTAG 57.916 55.000 0.00 0.00 41.52 2.74
2451 6549 1.046204 GGGGGTTCCGTAGATGTAGG 58.954 60.000 0.00 0.00 0.00 3.18
2452 6550 1.412074 GGGGGTTCCGTAGATGTAGGA 60.412 57.143 0.00 0.00 0.00 2.94
2453 6551 2.606378 GGGGTTCCGTAGATGTAGGAT 58.394 52.381 0.00 0.00 33.57 3.24
2454 6552 2.970640 GGGGTTCCGTAGATGTAGGATT 59.029 50.000 0.00 0.00 33.57 3.01
2455 6553 4.154942 GGGGTTCCGTAGATGTAGGATTA 58.845 47.826 0.00 0.00 33.57 1.75
2456 6554 4.776308 GGGGTTCCGTAGATGTAGGATTAT 59.224 45.833 0.00 0.00 33.57 1.28
2457 6555 5.105432 GGGGTTCCGTAGATGTAGGATTATC 60.105 48.000 0.00 0.00 33.57 1.75
2458 6556 5.392811 GGGTTCCGTAGATGTAGGATTATCG 60.393 48.000 0.00 0.00 33.57 2.92
2459 6557 4.959596 TCCGTAGATGTAGGATTATCGC 57.040 45.455 0.00 0.00 0.00 4.58
2460 6558 3.693085 TCCGTAGATGTAGGATTATCGCC 59.307 47.826 0.00 0.00 0.00 5.54
2461 6559 3.487042 CCGTAGATGTAGGATTATCGCCG 60.487 52.174 0.00 0.00 0.00 6.46
2462 6560 2.656560 AGATGTAGGATTATCGCCGC 57.343 50.000 0.00 0.00 0.00 6.53
2463 6561 1.204941 AGATGTAGGATTATCGCCGCC 59.795 52.381 0.00 0.00 0.00 6.13
2464 6562 1.204941 GATGTAGGATTATCGCCGCCT 59.795 52.381 0.00 0.00 34.56 5.52
2465 6563 0.601558 TGTAGGATTATCGCCGCCTC 59.398 55.000 0.00 0.00 32.04 4.70
2466 6564 0.601558 GTAGGATTATCGCCGCCTCA 59.398 55.000 0.00 0.00 32.04 3.86
2467 6565 0.601558 TAGGATTATCGCCGCCTCAC 59.398 55.000 0.00 0.00 32.04 3.51
2468 6566 1.668151 GGATTATCGCCGCCTCACC 60.668 63.158 0.00 0.00 0.00 4.02
2469 6567 1.367840 GATTATCGCCGCCTCACCT 59.632 57.895 0.00 0.00 0.00 4.00
2470 6568 0.249911 GATTATCGCCGCCTCACCTT 60.250 55.000 0.00 0.00 0.00 3.50
2471 6569 0.532862 ATTATCGCCGCCTCACCTTG 60.533 55.000 0.00 0.00 0.00 3.61
2472 6570 3.733344 TATCGCCGCCTCACCTTGC 62.733 63.158 0.00 0.00 0.00 4.01
2476 6574 4.020617 CCGCCTCACCTTGCCTCA 62.021 66.667 0.00 0.00 0.00 3.86
2477 6575 2.032528 CGCCTCACCTTGCCTCAA 59.967 61.111 0.00 0.00 0.00 3.02
2478 6576 2.328099 CGCCTCACCTTGCCTCAAC 61.328 63.158 0.00 0.00 0.00 3.18
2479 6577 1.228245 GCCTCACCTTGCCTCAACA 60.228 57.895 0.00 0.00 0.00 3.33
2480 6578 0.823356 GCCTCACCTTGCCTCAACAA 60.823 55.000 0.00 0.00 0.00 2.83
2481 6579 0.954452 CCTCACCTTGCCTCAACAAC 59.046 55.000 0.00 0.00 0.00 3.32
2482 6580 1.679139 CTCACCTTGCCTCAACAACA 58.321 50.000 0.00 0.00 0.00 3.33
2483 6581 1.334869 CTCACCTTGCCTCAACAACAC 59.665 52.381 0.00 0.00 0.00 3.32
2484 6582 0.385390 CACCTTGCCTCAACAACACC 59.615 55.000 0.00 0.00 0.00 4.16
2485 6583 0.033601 ACCTTGCCTCAACAACACCA 60.034 50.000 0.00 0.00 0.00 4.17
2486 6584 0.385390 CCTTGCCTCAACAACACCAC 59.615 55.000 0.00 0.00 0.00 4.16
2487 6585 1.392589 CTTGCCTCAACAACACCACT 58.607 50.000 0.00 0.00 0.00 4.00
2488 6586 1.334869 CTTGCCTCAACAACACCACTC 59.665 52.381 0.00 0.00 0.00 3.51
2489 6587 0.465460 TGCCTCAACAACACCACTCC 60.465 55.000 0.00 0.00 0.00 3.85
2490 6588 0.465460 GCCTCAACAACACCACTCCA 60.465 55.000 0.00 0.00 0.00 3.86
2491 6589 1.308998 CCTCAACAACACCACTCCAC 58.691 55.000 0.00 0.00 0.00 4.02
2492 6590 0.937304 CTCAACAACACCACTCCACG 59.063 55.000 0.00 0.00 0.00 4.94
2493 6591 0.462937 TCAACAACACCACTCCACGG 60.463 55.000 0.00 0.00 0.00 4.94
2494 6592 0.746563 CAACAACACCACTCCACGGT 60.747 55.000 0.00 0.00 37.16 4.83
2495 6593 0.463116 AACAACACCACTCCACGGTC 60.463 55.000 0.00 0.00 33.25 4.79
2496 6594 1.954146 CAACACCACTCCACGGTCG 60.954 63.158 0.00 0.00 33.25 4.79
2497 6595 3.802418 AACACCACTCCACGGTCGC 62.802 63.158 0.00 0.00 33.25 5.19
2498 6596 4.293648 CACCACTCCACGGTCGCA 62.294 66.667 0.00 0.00 33.25 5.10
2499 6597 3.311110 ACCACTCCACGGTCGCAT 61.311 61.111 0.00 0.00 27.30 4.73
2500 6598 2.509336 CCACTCCACGGTCGCATC 60.509 66.667 0.00 0.00 0.00 3.91
2501 6599 2.261361 CACTCCACGGTCGCATCA 59.739 61.111 0.00 0.00 0.00 3.07
2502 6600 2.094659 CACTCCACGGTCGCATCAC 61.095 63.158 0.00 0.00 0.00 3.06
2503 6601 2.509336 CTCCACGGTCGCATCACC 60.509 66.667 0.00 0.00 0.00 4.02
2504 6602 3.295304 CTCCACGGTCGCATCACCA 62.295 63.158 0.00 0.00 36.01 4.17
2505 6603 2.358125 CCACGGTCGCATCACCAA 60.358 61.111 0.00 0.00 36.01 3.67
2506 6604 1.745115 CCACGGTCGCATCACCAAT 60.745 57.895 0.00 0.00 36.01 3.16
2507 6605 1.305219 CCACGGTCGCATCACCAATT 61.305 55.000 0.00 0.00 36.01 2.32
2508 6606 0.096976 CACGGTCGCATCACCAATTC 59.903 55.000 0.00 0.00 36.01 2.17
2509 6607 1.024579 ACGGTCGCATCACCAATTCC 61.025 55.000 0.00 0.00 36.01 3.01
2510 6608 1.714899 CGGTCGCATCACCAATTCCC 61.715 60.000 0.00 0.00 36.01 3.97
2511 6609 1.384222 GGTCGCATCACCAATTCCCC 61.384 60.000 0.00 0.00 36.32 4.81
2512 6610 0.679640 GTCGCATCACCAATTCCCCA 60.680 55.000 0.00 0.00 0.00 4.96
2513 6611 0.394216 TCGCATCACCAATTCCCCAG 60.394 55.000 0.00 0.00 0.00 4.45
2514 6612 1.818555 GCATCACCAATTCCCCAGC 59.181 57.895 0.00 0.00 0.00 4.85
2515 6613 0.685458 GCATCACCAATTCCCCAGCT 60.685 55.000 0.00 0.00 0.00 4.24
2516 6614 1.410083 GCATCACCAATTCCCCAGCTA 60.410 52.381 0.00 0.00 0.00 3.32
2517 6615 2.949963 GCATCACCAATTCCCCAGCTAA 60.950 50.000 0.00 0.00 0.00 3.09
2518 6616 2.806945 TCACCAATTCCCCAGCTAAG 57.193 50.000 0.00 0.00 0.00 2.18
2519 6617 1.284785 TCACCAATTCCCCAGCTAAGG 59.715 52.381 0.00 0.00 0.00 2.69
2520 6618 1.284785 CACCAATTCCCCAGCTAAGGA 59.715 52.381 3.48 1.58 0.00 3.36
2521 6619 2.091665 CACCAATTCCCCAGCTAAGGAT 60.092 50.000 4.79 0.00 30.55 3.24
2522 6620 2.091665 ACCAATTCCCCAGCTAAGGATG 60.092 50.000 4.79 2.07 30.55 3.51
2523 6621 2.175499 CCAATTCCCCAGCTAAGGATGA 59.825 50.000 4.79 0.00 30.55 2.92
2524 6622 3.217626 CAATTCCCCAGCTAAGGATGAC 58.782 50.000 4.79 0.00 30.55 3.06
2525 6623 1.965414 TTCCCCAGCTAAGGATGACA 58.035 50.000 4.79 0.00 30.55 3.58
2526 6624 1.965414 TCCCCAGCTAAGGATGACAA 58.035 50.000 3.48 0.00 0.00 3.18
2527 6625 2.492025 TCCCCAGCTAAGGATGACAAT 58.508 47.619 3.48 0.00 0.00 2.71
2528 6626 2.852449 TCCCCAGCTAAGGATGACAATT 59.148 45.455 3.48 0.00 0.00 2.32
2529 6627 3.269381 TCCCCAGCTAAGGATGACAATTT 59.731 43.478 3.48 0.00 0.00 1.82
2530 6628 4.026052 CCCCAGCTAAGGATGACAATTTT 58.974 43.478 3.48 0.00 0.00 1.82
2531 6629 5.044476 TCCCCAGCTAAGGATGACAATTTTA 60.044 40.000 3.48 0.00 0.00 1.52
2532 6630 5.067805 CCCCAGCTAAGGATGACAATTTTAC 59.932 44.000 3.48 0.00 0.00 2.01
2533 6631 5.067805 CCCAGCTAAGGATGACAATTTTACC 59.932 44.000 0.00 0.00 0.00 2.85
2534 6632 5.067805 CCAGCTAAGGATGACAATTTTACCC 59.932 44.000 0.00 0.00 0.00 3.69
2535 6633 5.652014 CAGCTAAGGATGACAATTTTACCCA 59.348 40.000 0.00 0.00 0.00 4.51
2536 6634 6.322201 CAGCTAAGGATGACAATTTTACCCAT 59.678 38.462 0.00 0.00 0.00 4.00
2537 6635 6.322201 AGCTAAGGATGACAATTTTACCCATG 59.678 38.462 0.00 0.00 0.00 3.66
2538 6636 5.937975 AAGGATGACAATTTTACCCATGG 57.062 39.130 4.14 4.14 0.00 3.66
2539 6637 5.205517 AGGATGACAATTTTACCCATGGA 57.794 39.130 15.22 0.00 0.00 3.41
2540 6638 5.780731 AGGATGACAATTTTACCCATGGAT 58.219 37.500 15.22 0.00 0.00 3.41
2541 6639 6.921412 AGGATGACAATTTTACCCATGGATA 58.079 36.000 15.22 0.00 0.00 2.59
2542 6640 6.777580 AGGATGACAATTTTACCCATGGATAC 59.222 38.462 15.22 0.00 0.00 2.24
2543 6641 6.293955 GGATGACAATTTTACCCATGGATACG 60.294 42.308 15.22 0.00 42.51 3.06
2544 6642 5.502079 TGACAATTTTACCCATGGATACGT 58.498 37.500 15.22 4.79 42.51 3.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.552578 TTGGACGCCTGCTAAGACTA 58.447 50.000 0.00 0.00 0.00 2.59
7 8 1.877443 GTTTTTGGACGCCTGCTAAGA 59.123 47.619 0.00 0.00 0.00 2.10
8 9 1.606668 TGTTTTTGGACGCCTGCTAAG 59.393 47.619 0.00 0.00 0.00 2.18
9 10 1.335496 GTGTTTTTGGACGCCTGCTAA 59.665 47.619 0.00 0.00 0.00 3.09
11 12 1.733526 GTGTTTTTGGACGCCTGCT 59.266 52.632 0.00 0.00 0.00 4.24
12 13 1.657181 CGTGTTTTTGGACGCCTGC 60.657 57.895 0.00 0.00 0.00 4.85
13 14 0.591236 CACGTGTTTTTGGACGCCTG 60.591 55.000 7.58 0.00 39.22 4.85
14 15 1.725066 CACGTGTTTTTGGACGCCT 59.275 52.632 7.58 0.00 39.22 5.52
16 17 1.942223 GGCACGTGTTTTTGGACGC 60.942 57.895 18.38 0.00 39.22 5.19
17 18 1.298788 GGGCACGTGTTTTTGGACG 60.299 57.895 18.38 0.00 41.41 4.79
18 19 0.173708 TTGGGCACGTGTTTTTGGAC 59.826 50.000 18.38 0.00 0.00 4.02
19 20 0.895530 TTTGGGCACGTGTTTTTGGA 59.104 45.000 18.38 0.00 0.00 3.53
21 22 2.475353 GCTTTTTGGGCACGTGTTTTTG 60.475 45.455 18.38 1.90 0.00 2.44
22 23 1.735018 GCTTTTTGGGCACGTGTTTTT 59.265 42.857 18.38 0.00 0.00 1.94
23 24 1.338200 TGCTTTTTGGGCACGTGTTTT 60.338 42.857 18.38 0.00 34.56 2.43
24 25 0.247736 TGCTTTTTGGGCACGTGTTT 59.752 45.000 18.38 0.00 34.56 2.83
25 26 0.179113 CTGCTTTTTGGGCACGTGTT 60.179 50.000 18.38 0.00 35.71 3.32
26 27 1.034838 TCTGCTTTTTGGGCACGTGT 61.035 50.000 18.38 0.00 35.71 4.49
28 29 1.034838 TGTCTGCTTTTTGGGCACGT 61.035 50.000 0.00 0.00 35.71 4.49
29 30 0.318107 CTGTCTGCTTTTTGGGCACG 60.318 55.000 0.00 0.00 35.71 5.34
30 31 0.746659 ACTGTCTGCTTTTTGGGCAC 59.253 50.000 0.00 0.00 35.71 5.01
32 33 0.598419 GCACTGTCTGCTTTTTGGGC 60.598 55.000 0.00 0.00 43.33 5.36
33 34 3.575399 GCACTGTCTGCTTTTTGGG 57.425 52.632 0.00 0.00 43.33 4.12
42 43 3.374745 GTTCCACAATTTGCACTGTCTG 58.625 45.455 0.00 0.00 0.00 3.51
44 45 2.384382 CGTTCCACAATTTGCACTGTC 58.616 47.619 0.00 0.00 0.00 3.51
46 47 1.130955 GCGTTCCACAATTTGCACTG 58.869 50.000 0.00 0.00 0.00 3.66
47 48 0.031994 GGCGTTCCACAATTTGCACT 59.968 50.000 0.00 0.00 0.00 4.40
51 52 1.732683 GGCGGCGTTCCACAATTTG 60.733 57.895 9.37 0.00 0.00 2.32
52 53 2.648454 GGCGGCGTTCCACAATTT 59.352 55.556 9.37 0.00 0.00 1.82
53 54 3.370231 GGGCGGCGTTCCACAATT 61.370 61.111 9.37 0.00 0.00 2.32
54 55 4.652131 TGGGCGGCGTTCCACAAT 62.652 61.111 17.45 0.00 0.00 2.71
55 56 4.877619 TTGGGCGGCGTTCCACAA 62.878 61.111 20.20 9.75 32.00 3.33
56 57 4.877619 TTTGGGCGGCGTTCCACA 62.878 61.111 20.20 13.27 32.00 4.17
57 58 3.140225 TTTTTGGGCGGCGTTCCAC 62.140 57.895 20.20 0.97 32.00 4.02
58 59 2.833582 TTTTTGGGCGGCGTTCCA 60.834 55.556 17.45 17.45 0.00 3.53
81 82 1.201726 CGCGCTTCACAATTTGCATTG 60.202 47.619 5.56 0.00 44.90 2.82
82 83 1.062258 CGCGCTTCACAATTTGCATT 58.938 45.000 5.56 0.00 0.00 3.56
83 84 1.346378 GCGCGCTTCACAATTTGCAT 61.346 50.000 26.67 0.00 0.00 3.96
85 86 2.015627 TGCGCGCTTCACAATTTGC 61.016 52.632 33.29 0.00 0.00 3.68
87 88 0.248825 TTGTGCGCGCTTCACAATTT 60.249 45.000 33.29 0.00 45.99 1.82
89 90 3.029810 TTGTGCGCGCTTCACAAT 58.970 50.000 33.29 0.00 45.99 2.71
91 92 2.555782 GATTGTGCGCGCTTCACA 59.444 55.556 33.29 24.96 42.10 3.58
92 93 2.202349 GGATTGTGCGCGCTTCAC 60.202 61.111 33.29 22.46 35.14 3.18
94 95 2.813179 ATCGGATTGTGCGCGCTTC 61.813 57.895 33.29 24.10 0.00 3.86
95 96 2.819595 ATCGGATTGTGCGCGCTT 60.820 55.556 33.29 14.38 0.00 4.68
96 97 3.566853 CATCGGATTGTGCGCGCT 61.567 61.111 33.29 12.33 0.00 5.92
99 100 4.256090 GGGCATCGGATTGTGCGC 62.256 66.667 0.00 0.00 44.97 6.09
101 102 0.537143 TATGGGGCATCGGATTGTGC 60.537 55.000 0.00 0.00 40.55 4.57
102 103 2.205022 ATATGGGGCATCGGATTGTG 57.795 50.000 0.00 0.00 0.00 3.33
103 104 3.889815 CATATATGGGGCATCGGATTGT 58.110 45.455 4.68 0.00 0.00 2.71
104 105 2.620115 GCATATATGGGGCATCGGATTG 59.380 50.000 14.51 0.00 0.00 2.67
105 106 2.511218 AGCATATATGGGGCATCGGATT 59.489 45.455 14.51 0.00 0.00 3.01
106 107 2.130193 AGCATATATGGGGCATCGGAT 58.870 47.619 14.51 0.00 0.00 4.18
107 108 1.210234 CAGCATATATGGGGCATCGGA 59.790 52.381 14.51 0.00 0.00 4.55
108 109 1.671979 CAGCATATATGGGGCATCGG 58.328 55.000 14.51 0.00 0.00 4.18
109 110 1.019673 GCAGCATATATGGGGCATCG 58.980 55.000 14.51 0.00 0.00 3.84
110 111 1.019673 CGCAGCATATATGGGGCATC 58.980 55.000 14.51 0.00 0.00 3.91
111 112 3.179925 CGCAGCATATATGGGGCAT 57.820 52.632 14.51 0.00 0.00 4.40
130 131 3.498840 GCTGAAAAGCGCTATCGTG 57.501 52.632 12.05 10.51 38.14 4.35
148 149 0.935366 TAAAAGTTTTTGGGCGCGCG 60.935 50.000 28.44 28.44 0.00 6.86
149 150 0.781787 CTAAAAGTTTTTGGGCGCGC 59.218 50.000 25.94 25.94 0.00 6.86
150 151 0.781787 GCTAAAAGTTTTTGGGCGCG 59.218 50.000 6.10 0.00 0.00 6.86
151 152 1.525197 GTGCTAAAAGTTTTTGGGCGC 59.475 47.619 6.10 11.20 34.98 6.53
153 154 4.939271 TGTAGTGCTAAAAGTTTTTGGGC 58.061 39.130 6.10 9.39 33.81 5.36
155 156 5.458779 GTGCTGTAGTGCTAAAAGTTTTTGG 59.541 40.000 6.10 1.79 0.00 3.28
157 158 6.265577 CAGTGCTGTAGTGCTAAAAGTTTTT 58.734 36.000 6.10 0.00 0.00 1.94
158 159 5.821204 CAGTGCTGTAGTGCTAAAAGTTTT 58.179 37.500 6.06 6.06 0.00 2.43
159 160 5.424121 CAGTGCTGTAGTGCTAAAAGTTT 57.576 39.130 0.00 0.00 0.00 2.66
175 176 1.302351 GGACAGCTTCAGCAGTGCT 60.302 57.895 13.14 13.14 43.46 4.40
177 178 1.005748 TCGGACAGCTTCAGCAGTG 60.006 57.895 0.97 0.00 40.94 3.66
179 180 2.091112 CGTCGGACAGCTTCAGCAG 61.091 63.158 9.10 0.00 45.16 4.24
180 181 1.520600 TACGTCGGACAGCTTCAGCA 61.521 55.000 9.10 0.00 45.16 4.41
181 182 0.388134 TTACGTCGGACAGCTTCAGC 60.388 55.000 9.10 0.00 42.49 4.26
183 184 2.512485 TTTTACGTCGGACAGCTTCA 57.488 45.000 9.10 0.00 0.00 3.02
201 202 7.009357 TGCTTCGCGTACTAAAATTTTGTTTTT 59.991 29.630 13.76 0.00 33.56 1.94
202 203 6.472808 TGCTTCGCGTACTAAAATTTTGTTTT 59.527 30.769 13.76 0.00 0.00 2.43
203 204 5.972382 TGCTTCGCGTACTAAAATTTTGTTT 59.028 32.000 13.76 0.38 0.00 2.83
229 230 1.474478 TCTTCAACAGGCGCACAAAAA 59.526 42.857 10.83 0.00 0.00 1.94
230 231 1.098869 TCTTCAACAGGCGCACAAAA 58.901 45.000 10.83 0.00 0.00 2.44
231 232 1.001487 CATCTTCAACAGGCGCACAAA 60.001 47.619 10.83 0.00 0.00 2.83
232 233 0.592637 CATCTTCAACAGGCGCACAA 59.407 50.000 10.83 0.00 0.00 3.33
233 234 1.855213 GCATCTTCAACAGGCGCACA 61.855 55.000 10.83 0.00 0.00 4.57
234 235 1.154150 GCATCTTCAACAGGCGCAC 60.154 57.895 10.83 0.00 0.00 5.34
235 236 1.300971 GAGCATCTTCAACAGGCGCA 61.301 55.000 10.83 0.00 0.00 6.09
236 237 1.427020 GAGCATCTTCAACAGGCGC 59.573 57.895 0.00 0.00 0.00 6.53
244 245 7.338449 TTGATTGATTCATTCAGAGCATCTTCA 59.662 33.333 10.25 0.00 37.55 3.02
246 247 7.122204 TGTTGATTGATTCATTCAGAGCATCTT 59.878 33.333 10.25 0.00 37.55 2.40
247 248 6.602009 TGTTGATTGATTCATTCAGAGCATCT 59.398 34.615 10.25 0.00 39.59 2.90
249 250 6.561614 GTGTTGATTGATTCATTCAGAGCAT 58.438 36.000 10.25 0.00 35.27 3.79
250 251 5.391203 CGTGTTGATTGATTCATTCAGAGCA 60.391 40.000 10.25 8.79 35.27 4.26
251 252 5.026462 CGTGTTGATTGATTCATTCAGAGC 58.974 41.667 10.25 6.95 35.27 4.09
254 255 4.100529 GCCGTGTTGATTGATTCATTCAG 58.899 43.478 10.25 2.35 35.27 3.02
257 258 3.758023 TGAGCCGTGTTGATTGATTCATT 59.242 39.130 0.00 0.00 33.34 2.57
297 300 1.356938 CTAGCGGGAGAACGAAAACC 58.643 55.000 0.00 0.00 35.47 3.27
332 335 5.457799 ACCGACGATGAGAAATAACAATACG 59.542 40.000 0.00 0.00 0.00 3.06
340 343 2.621998 GAGGGACCGACGATGAGAAATA 59.378 50.000 0.00 0.00 0.00 1.40
341 344 1.409427 GAGGGACCGACGATGAGAAAT 59.591 52.381 0.00 0.00 0.00 2.17
343 346 0.034380 AGAGGGACCGACGATGAGAA 60.034 55.000 0.00 0.00 0.00 2.87
348 351 1.064906 TCAGTAAGAGGGACCGACGAT 60.065 52.381 0.00 0.00 0.00 3.73
362 370 5.419542 CGTCTCCTCCAATGATTTCAGTAA 58.580 41.667 0.00 0.00 0.00 2.24
449 457 5.220892 CCGTACTTGTTAGAAAAAGGCACAA 60.221 40.000 0.00 0.00 0.00 3.33
451 459 4.779987 CCGTACTTGTTAGAAAAAGGCAC 58.220 43.478 0.00 0.00 0.00 5.01
480 488 7.704271 AGATGACTAATAACGACGAATTCTCA 58.296 34.615 0.00 6.23 0.00 3.27
515 532 0.319211 AAGCACCGACGACGAAATCA 60.319 50.000 9.28 0.00 42.66 2.57
589 606 9.471702 AGAAATCTTGGTTTATCTTCATGATGT 57.528 29.630 8.33 0.02 36.65 3.06
592 609 9.098355 CGTAGAAATCTTGGTTTATCTTCATGA 57.902 33.333 0.00 0.00 0.00 3.07
593 610 7.852945 GCGTAGAAATCTTGGTTTATCTTCATG 59.147 37.037 0.00 0.00 0.00 3.07
594 611 7.254455 CGCGTAGAAATCTTGGTTTATCTTCAT 60.254 37.037 0.00 0.00 0.00 2.57
596 613 6.035758 ACGCGTAGAAATCTTGGTTTATCTTC 59.964 38.462 11.67 0.00 0.00 2.87
597 614 5.873164 ACGCGTAGAAATCTTGGTTTATCTT 59.127 36.000 11.67 0.00 0.00 2.40
598 615 5.291128 CACGCGTAGAAATCTTGGTTTATCT 59.709 40.000 13.44 0.00 0.00 1.98
601 618 4.386652 GTCACGCGTAGAAATCTTGGTTTA 59.613 41.667 13.44 0.00 0.00 2.01
602 619 3.185797 GTCACGCGTAGAAATCTTGGTTT 59.814 43.478 13.44 0.00 0.00 3.27
603 620 2.735134 GTCACGCGTAGAAATCTTGGTT 59.265 45.455 13.44 0.00 0.00 3.67
604 621 2.029290 AGTCACGCGTAGAAATCTTGGT 60.029 45.455 13.44 0.00 0.00 3.67
636 653 2.225963 GCTGCAGATATGCATCTTCCAC 59.774 50.000 20.43 0.00 44.47 4.02
943 1013 2.187946 GATGGGTCTGGGCACTCG 59.812 66.667 0.00 0.00 0.00 4.18
944 1014 2.592308 GGATGGGTCTGGGCACTC 59.408 66.667 0.00 0.00 0.00 3.51
945 1015 3.017581 GGGATGGGTCTGGGCACT 61.018 66.667 0.00 0.00 0.00 4.40
946 1016 3.338250 TGGGATGGGTCTGGGCAC 61.338 66.667 0.00 0.00 0.00 5.01
947 1017 3.016971 CTGGGATGGGTCTGGGCA 61.017 66.667 0.00 0.00 0.00 5.36
948 1018 4.512914 GCTGGGATGGGTCTGGGC 62.513 72.222 0.00 0.00 0.00 5.36
949 1019 2.349100 GATGCTGGGATGGGTCTGGG 62.349 65.000 0.00 0.00 0.00 4.45
1051 1121 2.604132 GCTCAACTCAGCTTGAAACTGC 60.604 50.000 0.00 0.00 36.38 4.40
1060 1130 2.288666 TGAAAAACGCTCAACTCAGCT 58.711 42.857 0.00 0.00 37.25 4.24
1183 2803 2.325082 CGCCCCGAAGTTCACCTTG 61.325 63.158 3.32 0.00 32.03 3.61
1185 2805 4.016706 CCGCCCCGAAGTTCACCT 62.017 66.667 3.32 0.00 0.00 4.00
1371 2991 4.110482 CGGTAAACTCCTCCGAATTACTG 58.890 47.826 0.00 0.00 46.05 2.74
1464 3089 4.576463 AGTACACTTCTTCCTTGTTGCAAG 59.424 41.667 0.00 2.16 0.00 4.01
1490 3115 3.425892 GCAAATGAAGAGCAGCAGTACAG 60.426 47.826 0.00 0.00 0.00 2.74
1500 3125 0.039256 TTGCCGTGCAAATGAAGAGC 60.039 50.000 8.58 0.00 45.96 4.09
1512 3137 1.299773 AAAACGCATGGTTGCCGTG 60.300 52.632 3.16 3.16 46.57 4.94
1521 3146 8.005662 TCAAAGATAAAATGTCAAAACGCATG 57.994 30.769 0.00 0.00 0.00 4.06
1565 3867 1.606994 CCGGTTTGTGATTCTGGTCGA 60.607 52.381 0.00 0.00 0.00 4.20
1568 3870 1.142060 TCACCGGTTTGTGATTCTGGT 59.858 47.619 2.97 0.00 40.22 4.00
1572 3874 0.879090 GGGTCACCGGTTTGTGATTC 59.121 55.000 2.97 0.00 46.20 2.52
1577 3879 1.152839 CCAAGGGTCACCGGTTTGT 60.153 57.895 2.97 0.00 43.47 2.83
1597 3899 2.207924 GGGACTGTGACTGGACGGT 61.208 63.158 0.00 0.00 38.20 4.83
1862 5285 4.417518 AGCCTGTCTATAGACCTAGGAGTT 59.582 45.833 30.20 17.79 44.15 3.01
1896 5319 4.799678 TGAGAAGACGAGAAAGATGTGAC 58.200 43.478 0.00 0.00 0.00 3.67
2113 6211 1.896465 AGACTCAGCTCGTTAAGGCTT 59.104 47.619 4.58 4.58 36.59 4.35
2127 6225 4.270834 ACTACTCGGCTCATTAAGACTCA 58.729 43.478 0.00 0.00 0.00 3.41
2149 6247 1.140252 GAATAGGGCTGGGCTAACGAA 59.860 52.381 0.00 0.00 0.00 3.85
2157 6255 0.031721 GTCGTACGAATAGGGCTGGG 59.968 60.000 21.39 0.00 0.00 4.45
2191 6289 0.108567 GCACACACGGGGTTGTTTTT 60.109 50.000 0.00 0.00 0.00 1.94
2192 6290 1.513622 GCACACACGGGGTTGTTTT 59.486 52.632 0.00 0.00 0.00 2.43
2193 6291 2.419739 GGCACACACGGGGTTGTTT 61.420 57.895 0.00 0.00 0.00 2.83
2194 6292 2.831284 GGCACACACGGGGTTGTT 60.831 61.111 0.00 0.00 0.00 2.83
2197 6295 4.922026 GACGGCACACACGGGGTT 62.922 66.667 0.00 0.00 35.23 4.11
2201 6299 4.619227 AAGGGACGGCACACACGG 62.619 66.667 0.00 0.00 35.23 4.94
2202 6300 2.590575 AAAGGGACGGCACACACG 60.591 61.111 0.00 0.00 37.36 4.49
2203 6301 2.258726 GGAAAGGGACGGCACACAC 61.259 63.158 0.00 0.00 0.00 3.82
2204 6302 2.063015 ATGGAAAGGGACGGCACACA 62.063 55.000 0.00 0.00 0.00 3.72
2205 6303 1.303317 ATGGAAAGGGACGGCACAC 60.303 57.895 0.00 0.00 0.00 3.82
2206 6304 1.303236 CATGGAAAGGGACGGCACA 60.303 57.895 0.00 0.00 0.00 4.57
2207 6305 2.046285 CCATGGAAAGGGACGGCAC 61.046 63.158 5.56 0.00 0.00 5.01
2208 6306 1.570857 ATCCATGGAAAGGGACGGCA 61.571 55.000 20.67 0.00 35.67 5.69
2209 6307 0.395724 AATCCATGGAAAGGGACGGC 60.396 55.000 20.67 0.00 35.67 5.68
2210 6308 1.392589 CAATCCATGGAAAGGGACGG 58.607 55.000 20.67 0.00 35.67 4.79
2211 6309 0.740737 GCAATCCATGGAAAGGGACG 59.259 55.000 20.67 3.42 35.67 4.79
2212 6310 0.740737 CGCAATCCATGGAAAGGGAC 59.259 55.000 20.67 4.58 35.67 4.46
2213 6311 1.037030 GCGCAATCCATGGAAAGGGA 61.037 55.000 27.37 4.72 37.64 4.20
2214 6312 1.438814 GCGCAATCCATGGAAAGGG 59.561 57.895 20.67 21.55 0.00 3.95
2215 6313 1.064621 CGCGCAATCCATGGAAAGG 59.935 57.895 20.67 12.22 0.00 3.11
2216 6314 0.523968 CACGCGCAATCCATGGAAAG 60.524 55.000 20.67 15.22 0.00 2.62
2217 6315 1.505807 CACGCGCAATCCATGGAAA 59.494 52.632 20.67 0.00 0.00 3.13
2218 6316 2.405805 CCACGCGCAATCCATGGAA 61.406 57.895 20.67 1.96 31.69 3.53
2219 6317 2.811542 TTCCACGCGCAATCCATGGA 62.812 55.000 18.88 18.88 37.68 3.41
2220 6318 1.932011 TTTCCACGCGCAATCCATGG 61.932 55.000 5.73 4.97 0.00 3.66
2221 6319 0.101040 ATTTCCACGCGCAATCCATG 59.899 50.000 5.73 0.00 0.00 3.66
2222 6320 1.603802 CTATTTCCACGCGCAATCCAT 59.396 47.619 5.73 0.00 0.00 3.41
2223 6321 1.013596 CTATTTCCACGCGCAATCCA 58.986 50.000 5.73 0.00 0.00 3.41
2224 6322 0.317020 GCTATTTCCACGCGCAATCC 60.317 55.000 5.73 0.00 0.00 3.01
2225 6323 0.657840 AGCTATTTCCACGCGCAATC 59.342 50.000 5.73 0.00 0.00 2.67
2226 6324 1.948104 TAGCTATTTCCACGCGCAAT 58.052 45.000 5.73 1.06 0.00 3.56
2227 6325 1.395608 GTTAGCTATTTCCACGCGCAA 59.604 47.619 5.73 0.00 0.00 4.85
2228 6326 1.003851 GTTAGCTATTTCCACGCGCA 58.996 50.000 5.73 0.00 0.00 6.09
2229 6327 0.303796 GGTTAGCTATTTCCACGCGC 59.696 55.000 5.73 0.00 0.00 6.86
2230 6328 1.593006 CAGGTTAGCTATTTCCACGCG 59.407 52.381 3.53 3.53 0.00 6.01
2231 6329 1.330829 GCAGGTTAGCTATTTCCACGC 59.669 52.381 0.00 2.17 0.00 5.34
2232 6330 1.593006 CGCAGGTTAGCTATTTCCACG 59.407 52.381 0.00 3.26 0.00 4.94
2264 6362 0.451783 GGTTTAGCATTGCCCGTGAG 59.548 55.000 4.70 0.00 0.00 3.51
2265 6363 0.037590 AGGTTTAGCATTGCCCGTGA 59.962 50.000 4.70 0.00 0.00 4.35
2266 6364 1.400494 GTAGGTTTAGCATTGCCCGTG 59.600 52.381 4.70 0.00 0.00 4.94
2267 6365 1.746470 GTAGGTTTAGCATTGCCCGT 58.254 50.000 4.70 0.00 0.00 5.28
2268 6366 0.655733 CGTAGGTTTAGCATTGCCCG 59.344 55.000 4.70 0.00 0.00 6.13
2269 6367 1.746470 ACGTAGGTTTAGCATTGCCC 58.254 50.000 4.70 0.00 0.00 5.36
2270 6368 5.756833 AGTATTACGTAGGTTTAGCATTGCC 59.243 40.000 4.70 0.00 0.00 4.52
2271 6369 6.839820 AGTATTACGTAGGTTTAGCATTGC 57.160 37.500 0.00 0.00 0.00 3.56
2272 6370 8.193250 ACAAGTATTACGTAGGTTTAGCATTG 57.807 34.615 0.00 0.00 0.00 2.82
2273 6371 8.782339 AACAAGTATTACGTAGGTTTAGCATT 57.218 30.769 0.00 0.00 0.00 3.56
2274 6372 8.782339 AAACAAGTATTACGTAGGTTTAGCAT 57.218 30.769 0.00 0.00 0.00 3.79
2275 6373 9.874205 ATAAACAAGTATTACGTAGGTTTAGCA 57.126 29.630 0.00 0.00 34.11 3.49
2279 6377 8.445493 GCACATAAACAAGTATTACGTAGGTTT 58.555 33.333 0.00 4.53 0.00 3.27
2280 6378 7.820872 AGCACATAAACAAGTATTACGTAGGTT 59.179 33.333 0.00 0.00 0.00 3.50
2281 6379 7.325694 AGCACATAAACAAGTATTACGTAGGT 58.674 34.615 0.00 0.00 0.00 3.08
2282 6380 7.705325 AGAGCACATAAACAAGTATTACGTAGG 59.295 37.037 0.00 0.00 0.00 3.18
2283 6381 8.630278 AGAGCACATAAACAAGTATTACGTAG 57.370 34.615 0.00 0.00 0.00 3.51
2285 6383 8.991243 TTAGAGCACATAAACAAGTATTACGT 57.009 30.769 0.00 0.00 0.00 3.57
2286 6384 9.084164 ACTTAGAGCACATAAACAAGTATTACG 57.916 33.333 0.00 0.00 0.00 3.18
2293 6391 9.922305 GCTATTTACTTAGAGCACATAAACAAG 57.078 33.333 0.00 0.00 34.96 3.16
2294 6392 9.443323 TGCTATTTACTTAGAGCACATAAACAA 57.557 29.630 0.00 0.00 39.93 2.83
2295 6393 9.443323 TTGCTATTTACTTAGAGCACATAAACA 57.557 29.630 0.00 0.00 44.28 2.83
2296 6394 9.704098 GTTGCTATTTACTTAGAGCACATAAAC 57.296 33.333 0.00 0.00 44.28 2.01
2297 6395 8.600625 CGTTGCTATTTACTTAGAGCACATAAA 58.399 33.333 0.00 0.00 44.28 1.40
2298 6396 7.762615 ACGTTGCTATTTACTTAGAGCACATAA 59.237 33.333 0.00 0.00 44.28 1.90
2299 6397 7.222031 CACGTTGCTATTTACTTAGAGCACATA 59.778 37.037 0.00 0.00 44.28 2.29
2300 6398 6.036083 CACGTTGCTATTTACTTAGAGCACAT 59.964 38.462 0.00 0.00 44.28 3.21
2301 6399 5.347635 CACGTTGCTATTTACTTAGAGCACA 59.652 40.000 0.00 0.00 44.28 4.57
2302 6400 5.220416 CCACGTTGCTATTTACTTAGAGCAC 60.220 44.000 0.00 0.00 44.28 4.40
2303 6401 4.868171 CCACGTTGCTATTTACTTAGAGCA 59.132 41.667 0.00 0.00 42.98 4.26
2304 6402 5.107133 TCCACGTTGCTATTTACTTAGAGC 58.893 41.667 0.00 0.00 35.43 4.09
2305 6403 5.232414 GCTCCACGTTGCTATTTACTTAGAG 59.768 44.000 0.00 0.00 0.00 2.43
2306 6404 5.107133 GCTCCACGTTGCTATTTACTTAGA 58.893 41.667 0.00 0.00 0.00 2.10
2307 6405 4.026804 CGCTCCACGTTGCTATTTACTTAG 60.027 45.833 0.00 0.00 36.87 2.18
2308 6406 3.861113 CGCTCCACGTTGCTATTTACTTA 59.139 43.478 0.00 0.00 36.87 2.24
2309 6407 2.671396 CGCTCCACGTTGCTATTTACTT 59.329 45.455 0.00 0.00 36.87 2.24
2310 6408 2.268298 CGCTCCACGTTGCTATTTACT 58.732 47.619 0.00 0.00 36.87 2.24
2311 6409 2.713927 CGCTCCACGTTGCTATTTAC 57.286 50.000 0.00 0.00 36.87 2.01
2323 6421 4.054780 TGATCCAGTAATAACGCTCCAC 57.945 45.455 0.00 0.00 0.00 4.02
2324 6422 4.955811 ATGATCCAGTAATAACGCTCCA 57.044 40.909 0.00 0.00 0.00 3.86
2325 6423 5.869888 CCTAATGATCCAGTAATAACGCTCC 59.130 44.000 0.00 0.00 0.00 4.70
2326 6424 5.348997 GCCTAATGATCCAGTAATAACGCTC 59.651 44.000 0.00 0.00 0.00 5.03
2327 6425 5.238583 GCCTAATGATCCAGTAATAACGCT 58.761 41.667 0.00 0.00 0.00 5.07
2328 6426 4.091509 CGCCTAATGATCCAGTAATAACGC 59.908 45.833 0.00 0.00 0.00 4.84
2329 6427 4.625742 CCGCCTAATGATCCAGTAATAACG 59.374 45.833 0.00 0.00 0.00 3.18
2330 6428 4.935808 CCCGCCTAATGATCCAGTAATAAC 59.064 45.833 0.00 0.00 0.00 1.89
2331 6429 4.841813 TCCCGCCTAATGATCCAGTAATAA 59.158 41.667 0.00 0.00 0.00 1.40
2332 6430 4.422057 TCCCGCCTAATGATCCAGTAATA 58.578 43.478 0.00 0.00 0.00 0.98
2333 6431 3.248024 TCCCGCCTAATGATCCAGTAAT 58.752 45.455 0.00 0.00 0.00 1.89
2334 6432 2.684943 TCCCGCCTAATGATCCAGTAA 58.315 47.619 0.00 0.00 0.00 2.24
2335 6433 2.391926 TCCCGCCTAATGATCCAGTA 57.608 50.000 0.00 0.00 0.00 2.74
2336 6434 1.417890 CTTCCCGCCTAATGATCCAGT 59.582 52.381 0.00 0.00 0.00 4.00
2337 6435 1.271054 CCTTCCCGCCTAATGATCCAG 60.271 57.143 0.00 0.00 0.00 3.86
2338 6436 0.764890 CCTTCCCGCCTAATGATCCA 59.235 55.000 0.00 0.00 0.00 3.41
2339 6437 0.036875 CCCTTCCCGCCTAATGATCC 59.963 60.000 0.00 0.00 0.00 3.36
2340 6438 0.036875 CCCCTTCCCGCCTAATGATC 59.963 60.000 0.00 0.00 0.00 2.92
2341 6439 2.069165 GCCCCTTCCCGCCTAATGAT 62.069 60.000 0.00 0.00 0.00 2.45
2342 6440 2.752807 GCCCCTTCCCGCCTAATGA 61.753 63.158 0.00 0.00 0.00 2.57
2343 6441 2.203351 GCCCCTTCCCGCCTAATG 60.203 66.667 0.00 0.00 0.00 1.90
2344 6442 3.499029 GGCCCCTTCCCGCCTAAT 61.499 66.667 0.00 0.00 42.21 1.73
2353 6451 3.672503 ATGGTGGTGGGCCCCTTC 61.673 66.667 22.27 9.91 0.00 3.46
2354 6452 3.996621 CATGGTGGTGGGCCCCTT 61.997 66.667 22.27 0.00 0.00 3.95
2356 6454 3.537961 TTTCATGGTGGTGGGCCCC 62.538 63.158 22.27 10.91 0.00 5.80
2357 6455 0.909133 ATTTTCATGGTGGTGGGCCC 60.909 55.000 17.59 17.59 0.00 5.80
2358 6456 0.249955 CATTTTCATGGTGGTGGGCC 59.750 55.000 0.00 0.00 0.00 5.80
2359 6457 0.975887 ACATTTTCATGGTGGTGGGC 59.024 50.000 0.00 0.00 34.27 5.36
2360 6458 1.969923 ACACATTTTCATGGTGGTGGG 59.030 47.619 0.00 0.00 34.27 4.61
2361 6459 2.364970 ACACACATTTTCATGGTGGTGG 59.635 45.455 0.00 0.00 36.57 4.61
2362 6460 3.181477 ACACACACATTTTCATGGTGGTG 60.181 43.478 13.65 13.65 36.57 4.17
2363 6461 3.030291 ACACACACATTTTCATGGTGGT 58.970 40.909 0.00 0.00 36.57 4.16
2364 6462 3.731652 ACACACACATTTTCATGGTGG 57.268 42.857 0.00 0.00 36.57 4.61
2365 6463 6.419980 AAAAACACACACATTTTCATGGTG 57.580 33.333 0.00 0.00 37.49 4.17
2386 6484 2.313643 GTCTAATCCCCCTCCCCAAAAA 59.686 50.000 0.00 0.00 0.00 1.94
2387 6485 1.927371 GTCTAATCCCCCTCCCCAAAA 59.073 52.381 0.00 0.00 0.00 2.44
2388 6486 1.203635 TGTCTAATCCCCCTCCCCAAA 60.204 52.381 0.00 0.00 0.00 3.28
2389 6487 0.423956 TGTCTAATCCCCCTCCCCAA 59.576 55.000 0.00 0.00 0.00 4.12
2390 6488 0.030092 CTGTCTAATCCCCCTCCCCA 60.030 60.000 0.00 0.00 0.00 4.96
2391 6489 0.267960 TCTGTCTAATCCCCCTCCCC 59.732 60.000 0.00 0.00 0.00 4.81
2392 6490 1.344087 TGTCTGTCTAATCCCCCTCCC 60.344 57.143 0.00 0.00 0.00 4.30
2393 6491 2.176247 TGTCTGTCTAATCCCCCTCC 57.824 55.000 0.00 0.00 0.00 4.30
2394 6492 3.041946 ACATGTCTGTCTAATCCCCCTC 58.958 50.000 0.00 0.00 0.00 4.30
2395 6493 3.136641 ACATGTCTGTCTAATCCCCCT 57.863 47.619 0.00 0.00 0.00 4.79
2396 6494 3.933861 AACATGTCTGTCTAATCCCCC 57.066 47.619 0.00 0.00 33.36 5.40
2397 6495 8.478877 CCTATATAACATGTCTGTCTAATCCCC 58.521 40.741 0.00 0.00 33.36 4.81
2398 6496 9.036980 ACCTATATAACATGTCTGTCTAATCCC 57.963 37.037 0.00 0.00 33.36 3.85
2403 6501 9.000486 CGAAGACCTATATAACATGTCTGTCTA 58.000 37.037 0.00 0.00 36.47 2.59
2404 6502 7.502895 ACGAAGACCTATATAACATGTCTGTCT 59.497 37.037 0.00 1.29 36.47 3.41
2405 6503 7.649973 ACGAAGACCTATATAACATGTCTGTC 58.350 38.462 0.00 0.00 36.47 3.51
2406 6504 7.584122 ACGAAGACCTATATAACATGTCTGT 57.416 36.000 0.00 0.00 36.47 3.41
2407 6505 8.237949 CCTACGAAGACCTATATAACATGTCTG 58.762 40.741 0.00 0.00 36.47 3.51
2408 6506 7.393796 CCCTACGAAGACCTATATAACATGTCT 59.606 40.741 0.00 0.00 37.88 3.41
2409 6507 7.362747 CCCCTACGAAGACCTATATAACATGTC 60.363 44.444 0.00 0.00 0.00 3.06
2410 6508 6.436532 CCCCTACGAAGACCTATATAACATGT 59.563 42.308 0.00 0.00 0.00 3.21
2411 6509 6.127423 CCCCCTACGAAGACCTATATAACATG 60.127 46.154 0.00 0.00 0.00 3.21
2412 6510 5.956563 CCCCCTACGAAGACCTATATAACAT 59.043 44.000 0.00 0.00 0.00 2.71
2413 6511 5.162947 ACCCCCTACGAAGACCTATATAACA 60.163 44.000 0.00 0.00 0.00 2.41
2414 6512 5.328565 ACCCCCTACGAAGACCTATATAAC 58.671 45.833 0.00 0.00 0.00 1.89
2415 6513 5.605540 ACCCCCTACGAAGACCTATATAA 57.394 43.478 0.00 0.00 0.00 0.98
2416 6514 5.517299 GGAACCCCCTACGAAGACCTATATA 60.517 48.000 0.00 0.00 0.00 0.86
2417 6515 4.414677 GAACCCCCTACGAAGACCTATAT 58.585 47.826 0.00 0.00 0.00 0.86
2418 6516 3.437052 GGAACCCCCTACGAAGACCTATA 60.437 52.174 0.00 0.00 0.00 1.31
2419 6517 2.675583 GAACCCCCTACGAAGACCTAT 58.324 52.381 0.00 0.00 0.00 2.57
2420 6518 1.342374 GGAACCCCCTACGAAGACCTA 60.342 57.143 0.00 0.00 0.00 3.08
2421 6519 0.616964 GGAACCCCCTACGAAGACCT 60.617 60.000 0.00 0.00 0.00 3.85
2422 6520 1.903294 GGAACCCCCTACGAAGACC 59.097 63.158 0.00 0.00 0.00 3.85
2423 6521 1.253593 ACGGAACCCCCTACGAAGAC 61.254 60.000 0.00 0.00 0.00 3.01
2424 6522 0.331278 TACGGAACCCCCTACGAAGA 59.669 55.000 0.00 0.00 0.00 2.87
2425 6523 0.743097 CTACGGAACCCCCTACGAAG 59.257 60.000 0.00 0.00 0.00 3.79
2426 6524 0.331278 TCTACGGAACCCCCTACGAA 59.669 55.000 0.00 0.00 0.00 3.85
2427 6525 0.552848 ATCTACGGAACCCCCTACGA 59.447 55.000 0.00 0.00 0.00 3.43
2428 6526 0.672342 CATCTACGGAACCCCCTACG 59.328 60.000 0.00 0.00 0.00 3.51
2429 6527 1.785647 ACATCTACGGAACCCCCTAC 58.214 55.000 0.00 0.00 0.00 3.18
2430 6528 2.158415 CCTACATCTACGGAACCCCCTA 60.158 54.545 0.00 0.00 0.00 3.53
2431 6529 1.412649 CCTACATCTACGGAACCCCCT 60.413 57.143 0.00 0.00 0.00 4.79
2432 6530 1.046204 CCTACATCTACGGAACCCCC 58.954 60.000 0.00 0.00 0.00 5.40
2433 6531 2.077687 TCCTACATCTACGGAACCCC 57.922 55.000 0.00 0.00 0.00 4.95
2434 6532 5.392811 CGATAATCCTACATCTACGGAACCC 60.393 48.000 0.00 0.00 0.00 4.11
2435 6533 5.638783 CGATAATCCTACATCTACGGAACC 58.361 45.833 0.00 0.00 0.00 3.62
2436 6534 5.094134 GCGATAATCCTACATCTACGGAAC 58.906 45.833 0.00 0.00 0.00 3.62
2437 6535 4.157289 GGCGATAATCCTACATCTACGGAA 59.843 45.833 0.00 0.00 0.00 4.30
2438 6536 3.693085 GGCGATAATCCTACATCTACGGA 59.307 47.826 0.00 0.00 0.00 4.69
2439 6537 3.487042 CGGCGATAATCCTACATCTACGG 60.487 52.174 0.00 0.00 0.00 4.02
2440 6538 3.681855 CGGCGATAATCCTACATCTACG 58.318 50.000 0.00 0.00 0.00 3.51
2441 6539 3.436496 GCGGCGATAATCCTACATCTAC 58.564 50.000 12.98 0.00 0.00 2.59
2442 6540 2.426024 GGCGGCGATAATCCTACATCTA 59.574 50.000 12.98 0.00 0.00 1.98
2443 6541 1.204941 GGCGGCGATAATCCTACATCT 59.795 52.381 12.98 0.00 0.00 2.90
2444 6542 1.204941 AGGCGGCGATAATCCTACATC 59.795 52.381 12.98 0.00 0.00 3.06
2445 6543 1.204941 GAGGCGGCGATAATCCTACAT 59.795 52.381 12.98 0.00 0.00 2.29
2446 6544 0.601558 GAGGCGGCGATAATCCTACA 59.398 55.000 12.98 0.00 0.00 2.74
2447 6545 0.601558 TGAGGCGGCGATAATCCTAC 59.398 55.000 12.98 2.31 0.00 3.18
2448 6546 0.601558 GTGAGGCGGCGATAATCCTA 59.398 55.000 12.98 0.00 0.00 2.94
2449 6547 1.367840 GTGAGGCGGCGATAATCCT 59.632 57.895 12.98 6.96 0.00 3.24
2450 6548 1.668151 GGTGAGGCGGCGATAATCC 60.668 63.158 12.98 0.54 0.00 3.01
2451 6549 0.249911 AAGGTGAGGCGGCGATAATC 60.250 55.000 12.98 2.28 0.00 1.75
2452 6550 0.532862 CAAGGTGAGGCGGCGATAAT 60.533 55.000 12.98 0.00 0.00 1.28
2453 6551 1.153449 CAAGGTGAGGCGGCGATAA 60.153 57.895 12.98 0.00 0.00 1.75
2454 6552 2.499205 CAAGGTGAGGCGGCGATA 59.501 61.111 12.98 0.00 0.00 2.92
2459 6557 3.551496 TTGAGGCAAGGTGAGGCGG 62.551 63.158 0.00 0.00 36.55 6.13
2460 6558 2.032528 TTGAGGCAAGGTGAGGCG 59.967 61.111 0.00 0.00 36.55 5.52
2461 6559 0.823356 TTGTTGAGGCAAGGTGAGGC 60.823 55.000 0.00 0.00 0.00 4.70
2462 6560 0.954452 GTTGTTGAGGCAAGGTGAGG 59.046 55.000 0.00 0.00 0.00 3.86
2463 6561 1.334869 GTGTTGTTGAGGCAAGGTGAG 59.665 52.381 0.00 0.00 0.00 3.51
2464 6562 1.388547 GTGTTGTTGAGGCAAGGTGA 58.611 50.000 0.00 0.00 0.00 4.02
2465 6563 0.385390 GGTGTTGTTGAGGCAAGGTG 59.615 55.000 0.00 0.00 0.00 4.00
2466 6564 0.033601 TGGTGTTGTTGAGGCAAGGT 60.034 50.000 0.00 0.00 0.00 3.50
2467 6565 0.385390 GTGGTGTTGTTGAGGCAAGG 59.615 55.000 0.00 0.00 0.00 3.61
2468 6566 1.334869 GAGTGGTGTTGTTGAGGCAAG 59.665 52.381 0.00 0.00 0.00 4.01
2469 6567 1.388547 GAGTGGTGTTGTTGAGGCAA 58.611 50.000 0.00 0.00 0.00 4.52
2470 6568 0.465460 GGAGTGGTGTTGTTGAGGCA 60.465 55.000 0.00 0.00 0.00 4.75
2471 6569 0.465460 TGGAGTGGTGTTGTTGAGGC 60.465 55.000 0.00 0.00 0.00 4.70
2472 6570 1.308998 GTGGAGTGGTGTTGTTGAGG 58.691 55.000 0.00 0.00 0.00 3.86
2473 6571 0.937304 CGTGGAGTGGTGTTGTTGAG 59.063 55.000 0.00 0.00 0.00 3.02
2474 6572 0.462937 CCGTGGAGTGGTGTTGTTGA 60.463 55.000 0.00 0.00 0.00 3.18
2475 6573 0.746563 ACCGTGGAGTGGTGTTGTTG 60.747 55.000 0.00 0.00 38.60 3.33
2476 6574 0.463116 GACCGTGGAGTGGTGTTGTT 60.463 55.000 0.00 0.00 40.63 2.83
2477 6575 1.145377 GACCGTGGAGTGGTGTTGT 59.855 57.895 0.00 0.00 40.63 3.32
2478 6576 1.954146 CGACCGTGGAGTGGTGTTG 60.954 63.158 0.00 0.00 40.63 3.33
2479 6577 2.420043 CGACCGTGGAGTGGTGTT 59.580 61.111 0.00 0.00 40.63 3.32
2480 6578 4.295119 GCGACCGTGGAGTGGTGT 62.295 66.667 0.00 0.00 40.63 4.16
2481 6579 3.589654 ATGCGACCGTGGAGTGGTG 62.590 63.158 0.00 0.00 40.63 4.17
2482 6580 3.296709 GATGCGACCGTGGAGTGGT 62.297 63.158 0.00 0.00 44.10 4.16
2483 6581 2.509336 GATGCGACCGTGGAGTGG 60.509 66.667 0.00 0.00 0.00 4.00
2484 6582 2.094659 GTGATGCGACCGTGGAGTG 61.095 63.158 0.00 0.00 0.00 3.51
2485 6583 2.261671 GTGATGCGACCGTGGAGT 59.738 61.111 0.00 0.00 0.00 3.85
2486 6584 2.509336 GGTGATGCGACCGTGGAG 60.509 66.667 0.00 0.00 0.00 3.86
2487 6585 2.178876 ATTGGTGATGCGACCGTGGA 62.179 55.000 0.00 0.00 39.07 4.02
2488 6586 1.305219 AATTGGTGATGCGACCGTGG 61.305 55.000 0.00 0.00 39.07 4.94
2489 6587 0.096976 GAATTGGTGATGCGACCGTG 59.903 55.000 0.00 0.00 39.07 4.94
2490 6588 1.024579 GGAATTGGTGATGCGACCGT 61.025 55.000 0.00 0.00 39.07 4.83
2491 6589 1.714899 GGGAATTGGTGATGCGACCG 61.715 60.000 0.00 0.00 39.07 4.79
2492 6590 1.384222 GGGGAATTGGTGATGCGACC 61.384 60.000 0.00 0.00 36.43 4.79
2493 6591 0.679640 TGGGGAATTGGTGATGCGAC 60.680 55.000 0.00 0.00 0.00 5.19
2494 6592 0.394216 CTGGGGAATTGGTGATGCGA 60.394 55.000 0.00 0.00 0.00 5.10
2495 6593 2.008268 GCTGGGGAATTGGTGATGCG 62.008 60.000 0.00 0.00 0.00 4.73
2496 6594 0.685458 AGCTGGGGAATTGGTGATGC 60.685 55.000 0.00 0.00 0.00 3.91
2497 6595 2.734755 TAGCTGGGGAATTGGTGATG 57.265 50.000 0.00 0.00 0.00 3.07
2498 6596 2.091665 CCTTAGCTGGGGAATTGGTGAT 60.092 50.000 0.00 0.00 0.00 3.06
2499 6597 1.284785 CCTTAGCTGGGGAATTGGTGA 59.715 52.381 0.00 0.00 0.00 4.02
2500 6598 1.284785 TCCTTAGCTGGGGAATTGGTG 59.715 52.381 0.00 0.00 0.00 4.17
2501 6599 1.681229 TCCTTAGCTGGGGAATTGGT 58.319 50.000 0.00 0.00 0.00 3.67
2502 6600 2.175499 TCATCCTTAGCTGGGGAATTGG 59.825 50.000 12.41 4.86 35.08 3.16
2503 6601 3.217626 GTCATCCTTAGCTGGGGAATTG 58.782 50.000 12.41 8.28 35.08 2.32
2504 6602 2.852449 TGTCATCCTTAGCTGGGGAATT 59.148 45.455 12.41 0.00 35.08 2.17
2505 6603 2.492025 TGTCATCCTTAGCTGGGGAAT 58.508 47.619 12.41 1.36 35.08 3.01
2506 6604 1.965414 TGTCATCCTTAGCTGGGGAA 58.035 50.000 12.41 0.00 35.08 3.97
2507 6605 1.965414 TTGTCATCCTTAGCTGGGGA 58.035 50.000 11.09 11.09 35.96 4.81
2508 6606 3.303351 AATTGTCATCCTTAGCTGGGG 57.697 47.619 0.00 0.00 0.00 4.96
2509 6607 5.067805 GGTAAAATTGTCATCCTTAGCTGGG 59.932 44.000 0.00 0.00 0.00 4.45
2510 6608 5.067805 GGGTAAAATTGTCATCCTTAGCTGG 59.932 44.000 0.00 0.00 0.00 4.85
2511 6609 5.652014 TGGGTAAAATTGTCATCCTTAGCTG 59.348 40.000 0.00 0.00 0.00 4.24
2512 6610 5.826643 TGGGTAAAATTGTCATCCTTAGCT 58.173 37.500 0.00 0.00 0.00 3.32
2513 6611 6.461509 CCATGGGTAAAATTGTCATCCTTAGC 60.462 42.308 2.85 0.00 0.00 3.09
2514 6612 6.833416 TCCATGGGTAAAATTGTCATCCTTAG 59.167 38.462 13.02 0.00 0.00 2.18
2515 6613 6.736581 TCCATGGGTAAAATTGTCATCCTTA 58.263 36.000 13.02 0.00 0.00 2.69
2516 6614 5.588845 TCCATGGGTAAAATTGTCATCCTT 58.411 37.500 13.02 0.00 0.00 3.36
2517 6615 5.205517 TCCATGGGTAAAATTGTCATCCT 57.794 39.130 13.02 0.00 0.00 3.24
2518 6616 6.293955 CGTATCCATGGGTAAAATTGTCATCC 60.294 42.308 13.02 0.00 0.00 3.51
2519 6617 6.262273 ACGTATCCATGGGTAAAATTGTCATC 59.738 38.462 13.02 0.00 0.00 2.92
2520 6618 6.126409 ACGTATCCATGGGTAAAATTGTCAT 58.874 36.000 13.02 0.00 0.00 3.06
2521 6619 5.502079 ACGTATCCATGGGTAAAATTGTCA 58.498 37.500 13.02 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.