Multiple sequence alignment - TraesCS4B01G287000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G287000 chr4B 100.000 2111 0 0 1 2111 570345753 570347863 0.000000e+00 3899.0
1 TraesCS4B01G287000 chr4B 91.525 295 21 2 876 1166 579103366 579103660 9.070000e-109 403.0
2 TraesCS4B01G287000 chr4B 87.240 337 35 7 865 1196 579390536 579390869 5.500000e-101 377.0
3 TraesCS4B01G287000 chr4B 85.948 306 34 7 857 1155 604141354 604141657 3.380000e-83 318.0
4 TraesCS4B01G287000 chr4D 88.416 423 39 6 785 1202 456124117 456124534 3.130000e-138 501.0
5 TraesCS4B01G287000 chr4D 88.889 315 24 9 871 1178 463402291 463402601 5.500000e-101 377.0
6 TraesCS4B01G287000 chr4D 90.592 287 21 4 873 1155 477914189 477914473 1.980000e-100 375.0
7 TraesCS4B01G287000 chr4D 87.302 315 19 10 1594 1890 456128225 456128536 7.210000e-90 340.0
8 TraesCS4B01G287000 chr4D 95.210 167 7 1 569 734 456123718 456123884 1.610000e-66 263.0
9 TraesCS4B01G287000 chr4D 94.231 52 2 1 488 539 456123603 456123653 6.240000e-11 78.7
10 TraesCS4B01G287000 chr4D 91.489 47 2 2 1 46 488805561 488805606 1.750000e-06 63.9
11 TraesCS4B01G287000 chr4A 89.943 348 31 2 860 1204 11623008 11622662 1.490000e-121 446.0
12 TraesCS4B01G287000 chr4A 88.406 345 28 8 866 1204 21844259 21844597 2.520000e-109 405.0
13 TraesCS4B01G287000 chr4A 90.604 298 16 7 1597 1890 11601159 11600870 3.290000e-103 385.0
14 TraesCS4B01G287000 chr4A 87.156 327 34 7 855 1175 6033689 6033365 4.280000e-97 364.0
15 TraesCS4B01G287000 chr4A 85.897 156 17 2 210 361 725867773 725867619 6.030000e-36 161.0
16 TraesCS4B01G287000 chr4A 94.444 54 2 1 488 540 361838180 361838233 4.830000e-12 82.4
17 TraesCS4B01G287000 chr6D 95.858 169 6 1 45 212 243032890 243033058 2.670000e-69 272.0
18 TraesCS4B01G287000 chr6D 95.210 167 8 0 45 211 404605357 404605523 4.470000e-67 265.0
19 TraesCS4B01G287000 chr6D 90.741 54 4 1 488 540 440504704 440504757 1.040000e-08 71.3
20 TraesCS4B01G287000 chr6D 95.238 42 2 0 1 42 414400928 414400887 1.350000e-07 67.6
21 TraesCS4B01G287000 chr7B 95.266 169 8 0 42 210 595441891 595442059 3.450000e-68 268.0
22 TraesCS4B01G287000 chr5B 95.808 167 6 1 45 210 571723414 571723248 3.450000e-68 268.0
23 TraesCS4B01G287000 chr2B 95.783 166 7 0 44 209 560444440 560444275 3.450000e-68 268.0
24 TraesCS4B01G287000 chr2B 84.615 156 20 1 210 361 493244532 493244687 3.630000e-33 152.0
25 TraesCS4B01G287000 chr2B 92.593 54 3 1 488 540 365195311 365195364 2.250000e-10 76.8
26 TraesCS4B01G287000 chr5A 95.238 168 8 0 44 211 458198877 458199044 1.240000e-67 267.0
27 TraesCS4B01G287000 chr5A 92.308 169 13 0 42 210 206731019 206730851 7.530000e-60 241.0
28 TraesCS4B01G287000 chr5A 86.486 148 15 2 208 351 299771774 299771628 7.800000e-35 158.0
29 TraesCS4B01G287000 chr5A 90.385 104 7 2 396 496 299771616 299771513 1.310000e-27 134.0
30 TraesCS4B01G287000 chr3B 94.706 170 9 0 40 209 571539907 571540076 4.470000e-67 265.0
31 TraesCS4B01G287000 chr3B 86.577 149 15 2 208 351 355428656 355428508 2.170000e-35 159.0
32 TraesCS4B01G287000 chr3B 89.423 104 8 2 396 496 355428496 355428393 6.110000e-26 128.0
33 TraesCS4B01G287000 chr3D 89.604 202 16 5 19 220 33189365 33189561 3.480000e-63 252.0
34 TraesCS4B01G287000 chr3D 97.222 36 1 0 1 36 360331456 360331491 6.290000e-06 62.1
35 TraesCS4B01G287000 chr1D 85.811 148 16 2 208 351 156779752 156779898 3.630000e-33 152.0
36 TraesCS4B01G287000 chr1D 89.423 104 8 2 396 496 156779910 156780013 6.110000e-26 128.0
37 TraesCS4B01G287000 chr1D 94.444 54 2 1 488 540 77757073 77757126 4.830000e-12 82.4
38 TraesCS4B01G287000 chr3A 86.429 140 14 2 208 343 662142031 662142169 4.690000e-32 148.0
39 TraesCS4B01G287000 chr3A 88.462 104 9 2 396 496 662142189 662142292 2.840000e-24 122.0
40 TraesCS4B01G287000 chr6A 85.135 148 17 2 208 351 99975734 99975588 1.690000e-31 147.0
41 TraesCS4B01G287000 chr6A 89.583 48 4 1 1 48 532902332 532902378 2.260000e-05 60.2
42 TraesCS4B01G287000 chr1A 83.544 158 21 2 208 361 548226266 548226110 2.180000e-30 143.0
43 TraesCS4B01G287000 chr1A 84.962 133 15 4 390 519 548226113 548225983 1.700000e-26 130.0
44 TraesCS4B01G287000 chr5D 94.444 54 2 1 488 540 221419704 221419757 4.830000e-12 82.4
45 TraesCS4B01G287000 chr5D 92.593 54 3 1 488 540 182387764 182387817 2.250000e-10 76.8
46 TraesCS4B01G287000 chr2D 95.918 49 2 0 488 536 317709628 317709580 1.740000e-11 80.5
47 TraesCS4B01G287000 chr2D 90.741 54 4 1 488 540 25334237 25334290 1.040000e-08 71.3
48 TraesCS4B01G287000 chr2D 90.385 52 0 5 1 48 178280763 178280713 1.750000e-06 63.9
49 TraesCS4B01G287000 chr7D 88.235 51 4 2 6 56 501895651 501895699 2.260000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G287000 chr4B 570345753 570347863 2110 False 3899.000 3899 100.00000 1 2111 1 chr4B.!!$F1 2110
1 TraesCS4B01G287000 chr4D 456123603 456128536 4933 False 295.675 501 91.28975 488 1890 4 chr4D.!!$F4 1402

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
963 1181 0.764752 AGCTACTATGGTGGGCCCTC 60.765 60.0 25.7 20.64 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2011 5552 0.037326 TGTCCTTCTAGTTGCTGGCG 60.037 55.0 0.0 0.0 0.0 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
22 23 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
23 24 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
24 25 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
25 26 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
26 27 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
27 28 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
28 29 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
29 30 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
30 31 1.961133 TTTTGGGACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
31 32 2.852714 TTTGGGACGGAGGGAGTATA 57.147 50.000 0.00 0.00 0.00 1.47
32 33 3.339713 TTTGGGACGGAGGGAGTATAT 57.660 47.619 0.00 0.00 0.00 0.86
33 34 2.304221 TGGGACGGAGGGAGTATATG 57.696 55.000 0.00 0.00 0.00 1.78
34 35 1.502039 TGGGACGGAGGGAGTATATGT 59.498 52.381 0.00 0.00 0.00 2.29
35 36 2.090943 TGGGACGGAGGGAGTATATGTT 60.091 50.000 0.00 0.00 0.00 2.71
36 37 2.299297 GGGACGGAGGGAGTATATGTTG 59.701 54.545 0.00 0.00 0.00 3.33
37 38 3.228453 GGACGGAGGGAGTATATGTTGA 58.772 50.000 0.00 0.00 0.00 3.18
38 39 3.833070 GGACGGAGGGAGTATATGTTGAT 59.167 47.826 0.00 0.00 0.00 2.57
39 40 4.283722 GGACGGAGGGAGTATATGTTGATT 59.716 45.833 0.00 0.00 0.00 2.57
40 41 5.221661 GGACGGAGGGAGTATATGTTGATTT 60.222 44.000 0.00 0.00 0.00 2.17
41 42 6.014840 GGACGGAGGGAGTATATGTTGATTTA 60.015 42.308 0.00 0.00 0.00 1.40
42 43 7.369551 ACGGAGGGAGTATATGTTGATTTAA 57.630 36.000 0.00 0.00 0.00 1.52
43 44 7.215085 ACGGAGGGAGTATATGTTGATTTAAC 58.785 38.462 0.00 0.00 39.80 2.01
44 45 7.070821 ACGGAGGGAGTATATGTTGATTTAACT 59.929 37.037 0.00 0.00 40.05 2.24
45 46 8.582437 CGGAGGGAGTATATGTTGATTTAACTA 58.418 37.037 0.00 0.00 40.05 2.24
46 47 9.708092 GGAGGGAGTATATGTTGATTTAACTAC 57.292 37.037 0.00 0.00 40.05 2.73
50 51 9.708092 GGAGTATATGTTGATTTAACTACTCCC 57.292 37.037 18.23 8.22 46.46 4.30
53 54 9.708092 GTATATGTTGATTTAACTACTCCCTCC 57.292 37.037 0.00 0.00 40.05 4.30
54 55 5.080969 TGTTGATTTAACTACTCCCTCCG 57.919 43.478 0.00 0.00 40.05 4.63
55 56 4.529377 TGTTGATTTAACTACTCCCTCCGT 59.471 41.667 0.00 0.00 40.05 4.69
56 57 5.012354 TGTTGATTTAACTACTCCCTCCGTT 59.988 40.000 0.00 0.00 40.05 4.44
57 58 5.334724 TGATTTAACTACTCCCTCCGTTC 57.665 43.478 0.00 0.00 0.00 3.95
58 59 4.161001 TGATTTAACTACTCCCTCCGTTCC 59.839 45.833 0.00 0.00 0.00 3.62
59 60 3.463048 TTAACTACTCCCTCCGTTCCT 57.537 47.619 0.00 0.00 0.00 3.36
60 61 4.591321 TTAACTACTCCCTCCGTTCCTA 57.409 45.455 0.00 0.00 0.00 2.94
61 62 3.463048 AACTACTCCCTCCGTTCCTAA 57.537 47.619 0.00 0.00 0.00 2.69
62 63 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
63 64 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
64 65 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
65 66 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
66 67 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
67 68 6.947158 ACTACTCCCTCCGTTCCTAAATATAG 59.053 42.308 0.00 0.00 0.00 1.31
90 91 7.736447 AGGTCTTTGTAGAGATTTCAACAAG 57.264 36.000 0.00 0.00 33.70 3.16
91 92 7.283329 AGGTCTTTGTAGAGATTTCAACAAGT 58.717 34.615 0.00 0.00 33.70 3.16
92 93 7.227512 AGGTCTTTGTAGAGATTTCAACAAGTG 59.772 37.037 0.00 0.00 33.70 3.16
93 94 7.226720 GGTCTTTGTAGAGATTTCAACAAGTGA 59.773 37.037 0.00 0.00 33.70 3.41
94 95 8.064814 GTCTTTGTAGAGATTTCAACAAGTGAC 58.935 37.037 0.00 0.00 35.39 3.67
95 96 7.987458 TCTTTGTAGAGATTTCAACAAGTGACT 59.013 33.333 0.00 0.00 35.39 3.41
96 97 9.261180 CTTTGTAGAGATTTCAACAAGTGACTA 57.739 33.333 0.00 0.00 35.39 2.59
97 98 8.589335 TTGTAGAGATTTCAACAAGTGACTAC 57.411 34.615 0.00 0.00 35.39 2.73
98 99 7.722363 TGTAGAGATTTCAACAAGTGACTACA 58.278 34.615 0.00 0.00 37.97 2.74
99 100 8.367911 TGTAGAGATTTCAACAAGTGACTACAT 58.632 33.333 0.00 0.00 36.58 2.29
100 101 9.856488 GTAGAGATTTCAACAAGTGACTACATA 57.144 33.333 0.00 0.00 35.39 2.29
101 102 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
102 103 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
103 104 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
104 105 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
105 106 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
106 107 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
107 108 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
108 109 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
109 110 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
110 111 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
111 112 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
112 113 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
113 114 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
114 115 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
115 116 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
116 117 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
117 118 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
118 119 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
119 120 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
120 121 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
121 122 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
122 123 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
123 124 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
124 125 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
125 126 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
138 139 8.894768 AGTGAATCTACACTCTAAAATATGGC 57.105 34.615 0.00 0.00 46.36 4.40
139 140 8.709308 AGTGAATCTACACTCTAAAATATGGCT 58.291 33.333 0.00 0.00 46.36 4.75
140 141 9.982651 GTGAATCTACACTCTAAAATATGGCTA 57.017 33.333 0.00 0.00 37.73 3.93
158 159 7.739995 ATGGCTATATACATCTGTATGTGGT 57.260 36.000 12.10 0.73 45.99 4.16
159 160 6.935167 TGGCTATATACATCTGTATGTGGTG 58.065 40.000 12.10 3.77 45.99 4.17
160 161 6.070824 TGGCTATATACATCTGTATGTGGTGG 60.071 42.308 12.10 1.40 45.99 4.61
161 162 6.070767 GGCTATATACATCTGTATGTGGTGGT 60.071 42.308 12.10 0.00 45.99 4.16
162 163 7.036220 GCTATATACATCTGTATGTGGTGGTC 58.964 42.308 12.10 0.00 45.99 4.02
163 164 4.689612 ATACATCTGTATGTGGTGGTCC 57.310 45.455 2.10 0.00 45.99 4.46
164 165 2.265367 ACATCTGTATGTGGTGGTCCA 58.735 47.619 0.00 0.00 44.79 4.02
165 166 2.846206 ACATCTGTATGTGGTGGTCCAT 59.154 45.455 0.00 0.00 44.79 3.41
166 167 3.266772 ACATCTGTATGTGGTGGTCCATT 59.733 43.478 0.00 0.00 44.79 3.16
167 168 4.263905 ACATCTGTATGTGGTGGTCCATTT 60.264 41.667 0.00 0.00 44.79 2.32
168 169 3.684908 TCTGTATGTGGTGGTCCATTTG 58.315 45.455 0.00 0.00 46.20 2.32
169 170 3.329225 TCTGTATGTGGTGGTCCATTTGA 59.671 43.478 0.00 0.00 46.20 2.69
170 171 4.078537 CTGTATGTGGTGGTCCATTTGAA 58.921 43.478 0.00 0.00 46.20 2.69
171 172 4.474394 TGTATGTGGTGGTCCATTTGAAA 58.526 39.130 0.00 0.00 46.20 2.69
172 173 5.083122 TGTATGTGGTGGTCCATTTGAAAT 58.917 37.500 0.00 0.00 46.20 2.17
173 174 4.806640 ATGTGGTGGTCCATTTGAAATC 57.193 40.909 0.00 0.00 46.20 2.17
174 175 3.843422 TGTGGTGGTCCATTTGAAATCT 58.157 40.909 0.00 0.00 46.20 2.40
175 176 3.826157 TGTGGTGGTCCATTTGAAATCTC 59.174 43.478 0.00 0.00 46.20 2.75
176 177 4.082125 GTGGTGGTCCATTTGAAATCTCT 58.918 43.478 0.00 0.00 46.20 3.10
177 178 5.222027 TGTGGTGGTCCATTTGAAATCTCTA 60.222 40.000 0.00 0.00 46.20 2.43
178 179 5.710099 GTGGTGGTCCATTTGAAATCTCTAA 59.290 40.000 0.00 0.00 46.20 2.10
179 180 6.208599 GTGGTGGTCCATTTGAAATCTCTAAA 59.791 38.462 0.00 0.00 46.20 1.85
180 181 6.780031 TGGTGGTCCATTTGAAATCTCTAAAA 59.220 34.615 0.00 0.00 39.03 1.52
181 182 7.288852 TGGTGGTCCATTTGAAATCTCTAAAAA 59.711 33.333 0.00 0.00 39.03 1.94
182 183 8.314021 GGTGGTCCATTTGAAATCTCTAAAAAT 58.686 33.333 0.00 0.00 0.00 1.82
219 220 8.943594 AGAACGAAGGGAGTATATCTTTATCT 57.056 34.615 0.00 0.00 0.00 1.98
220 221 9.369672 AGAACGAAGGGAGTATATCTTTATCTT 57.630 33.333 0.00 0.00 0.00 2.40
221 222 9.984190 GAACGAAGGGAGTATATCTTTATCTTT 57.016 33.333 0.00 0.00 0.00 2.52
245 246 8.950007 TTTTTCTAAGGTTCCAGTTATCCATT 57.050 30.769 0.00 0.00 0.00 3.16
246 247 7.938140 TTTCTAAGGTTCCAGTTATCCATTG 57.062 36.000 0.00 0.00 0.00 2.82
247 248 5.437060 TCTAAGGTTCCAGTTATCCATTGC 58.563 41.667 0.00 0.00 0.00 3.56
248 249 4.322057 AAGGTTCCAGTTATCCATTGCT 57.678 40.909 0.00 0.00 0.00 3.91
249 250 4.322057 AGGTTCCAGTTATCCATTGCTT 57.678 40.909 0.00 0.00 0.00 3.91
250 251 5.450818 AGGTTCCAGTTATCCATTGCTTA 57.549 39.130 0.00 0.00 0.00 3.09
251 252 5.826643 AGGTTCCAGTTATCCATTGCTTAA 58.173 37.500 0.00 0.00 0.00 1.85
252 253 6.435164 AGGTTCCAGTTATCCATTGCTTAAT 58.565 36.000 0.00 0.00 0.00 1.40
253 254 6.322201 AGGTTCCAGTTATCCATTGCTTAATG 59.678 38.462 0.00 0.00 0.00 1.90
254 255 6.321181 GGTTCCAGTTATCCATTGCTTAATGA 59.679 38.462 1.80 0.00 31.98 2.57
255 256 7.014615 GGTTCCAGTTATCCATTGCTTAATGAT 59.985 37.037 1.80 0.00 31.98 2.45
256 257 9.066892 GTTCCAGTTATCCATTGCTTAATGATA 57.933 33.333 1.80 0.00 31.98 2.15
257 258 9.812347 TTCCAGTTATCCATTGCTTAATGATAT 57.188 29.630 1.80 0.00 31.98 1.63
258 259 9.812347 TCCAGTTATCCATTGCTTAATGATATT 57.188 29.630 1.80 0.00 31.98 1.28
265 266 8.922931 TCCATTGCTTAATGATATTTAGAGCA 57.077 30.769 1.80 0.00 36.93 4.26
286 287 5.088141 CAATTGTAGGATTGCATCTCGAC 57.912 43.478 0.00 0.00 31.00 4.20
287 288 2.492019 TGTAGGATTGCATCTCGACG 57.508 50.000 0.00 0.00 0.00 5.12
288 289 1.749063 TGTAGGATTGCATCTCGACGT 59.251 47.619 0.00 0.00 0.00 4.34
289 290 2.946990 TGTAGGATTGCATCTCGACGTA 59.053 45.455 0.00 0.00 0.00 3.57
290 291 2.493713 AGGATTGCATCTCGACGTAC 57.506 50.000 0.00 0.00 0.00 3.67
291 292 2.025155 AGGATTGCATCTCGACGTACT 58.975 47.619 0.00 0.00 0.00 2.73
292 293 2.120232 GGATTGCATCTCGACGTACTG 58.880 52.381 0.00 0.00 0.00 2.74
293 294 2.223502 GGATTGCATCTCGACGTACTGA 60.224 50.000 0.00 0.00 0.00 3.41
294 295 3.435566 GATTGCATCTCGACGTACTGAA 58.564 45.455 0.00 0.00 0.00 3.02
295 296 2.257974 TGCATCTCGACGTACTGAAC 57.742 50.000 0.00 0.00 0.00 3.18
296 297 1.538075 TGCATCTCGACGTACTGAACA 59.462 47.619 0.00 0.00 0.00 3.18
297 298 1.912110 GCATCTCGACGTACTGAACAC 59.088 52.381 0.00 0.00 0.00 3.32
298 299 2.667448 GCATCTCGACGTACTGAACACA 60.667 50.000 0.00 0.00 0.00 3.72
299 300 3.759418 CATCTCGACGTACTGAACACAT 58.241 45.455 0.00 0.00 0.00 3.21
300 301 3.909776 TCTCGACGTACTGAACACATT 57.090 42.857 0.00 0.00 0.00 2.71
301 302 3.561503 TCTCGACGTACTGAACACATTG 58.438 45.455 0.00 0.00 0.00 2.82
302 303 2.055838 TCGACGTACTGAACACATTGC 58.944 47.619 0.00 0.00 0.00 3.56
303 304 1.790043 CGACGTACTGAACACATTGCA 59.210 47.619 0.00 0.00 0.00 4.08
304 305 2.219903 CGACGTACTGAACACATTGCAA 59.780 45.455 0.00 0.00 0.00 4.08
305 306 3.661678 CGACGTACTGAACACATTGCAAG 60.662 47.826 4.94 0.00 0.00 4.01
306 307 2.548057 ACGTACTGAACACATTGCAAGG 59.452 45.455 10.01 10.01 0.00 3.61
307 308 2.548057 CGTACTGAACACATTGCAAGGT 59.452 45.455 11.64 11.64 0.00 3.50
308 309 3.003275 CGTACTGAACACATTGCAAGGTT 59.997 43.478 15.14 13.35 0.00 3.50
309 310 3.441496 ACTGAACACATTGCAAGGTTG 57.559 42.857 15.14 12.39 0.00 3.77
327 328 8.679288 CAAGGTTGCTTTTCAATCATAACTAG 57.321 34.615 0.00 0.00 38.26 2.57
328 329 8.514594 CAAGGTTGCTTTTCAATCATAACTAGA 58.485 33.333 0.00 0.00 38.26 2.43
329 330 8.814038 AGGTTGCTTTTCAATCATAACTAGAT 57.186 30.769 0.00 0.00 38.26 1.98
330 331 9.247861 AGGTTGCTTTTCAATCATAACTAGATT 57.752 29.630 0.00 0.00 38.26 2.40
331 332 9.860898 GGTTGCTTTTCAATCATAACTAGATTT 57.139 29.630 0.00 0.00 35.85 2.17
348 349 8.499403 ACTAGATTTCTGATTCTTTTACAGCC 57.501 34.615 0.00 0.00 0.00 4.85
349 350 8.325046 ACTAGATTTCTGATTCTTTTACAGCCT 58.675 33.333 0.00 0.00 0.00 4.58
350 351 9.823647 CTAGATTTCTGATTCTTTTACAGCCTA 57.176 33.333 0.00 0.00 0.00 3.93
351 352 8.499403 AGATTTCTGATTCTTTTACAGCCTAC 57.501 34.615 0.00 0.00 0.00 3.18
352 353 8.325046 AGATTTCTGATTCTTTTACAGCCTACT 58.675 33.333 0.00 0.00 0.00 2.57
353 354 9.601217 GATTTCTGATTCTTTTACAGCCTACTA 57.399 33.333 0.00 0.00 0.00 1.82
354 355 9.606631 ATTTCTGATTCTTTTACAGCCTACTAG 57.393 33.333 0.00 0.00 0.00 2.57
355 356 7.956328 TCTGATTCTTTTACAGCCTACTAGA 57.044 36.000 0.00 0.00 0.00 2.43
356 357 8.362464 TCTGATTCTTTTACAGCCTACTAGAA 57.638 34.615 0.00 0.00 0.00 2.10
357 358 8.251721 TCTGATTCTTTTACAGCCTACTAGAAC 58.748 37.037 0.00 0.00 0.00 3.01
358 359 7.903145 TGATTCTTTTACAGCCTACTAGAACA 58.097 34.615 0.00 0.00 0.00 3.18
359 360 7.817962 TGATTCTTTTACAGCCTACTAGAACAC 59.182 37.037 0.00 0.00 0.00 3.32
360 361 6.659745 TCTTTTACAGCCTACTAGAACACA 57.340 37.500 0.00 0.00 0.00 3.72
361 362 6.688578 TCTTTTACAGCCTACTAGAACACAG 58.311 40.000 0.00 0.00 0.00 3.66
362 363 6.492429 TCTTTTACAGCCTACTAGAACACAGA 59.508 38.462 0.00 0.00 0.00 3.41
363 364 6.659745 TTTACAGCCTACTAGAACACAGAA 57.340 37.500 0.00 0.00 0.00 3.02
364 365 6.852420 TTACAGCCTACTAGAACACAGAAT 57.148 37.500 0.00 0.00 0.00 2.40
365 366 7.949690 TTACAGCCTACTAGAACACAGAATA 57.050 36.000 0.00 0.00 0.00 1.75
366 367 8.534954 TTACAGCCTACTAGAACACAGAATAT 57.465 34.615 0.00 0.00 0.00 1.28
367 368 9.636789 TTACAGCCTACTAGAACACAGAATATA 57.363 33.333 0.00 0.00 0.00 0.86
368 369 8.713708 ACAGCCTACTAGAACACAGAATATAT 57.286 34.615 0.00 0.00 0.00 0.86
369 370 9.148879 ACAGCCTACTAGAACACAGAATATATT 57.851 33.333 0.00 0.00 0.00 1.28
418 419 8.961294 ATGATGTCTCATTTTTGGAAAAACAA 57.039 26.923 0.00 0.00 39.09 2.83
419 420 8.195617 TGATGTCTCATTTTTGGAAAAACAAC 57.804 30.769 0.00 0.00 40.33 3.32
420 421 8.040132 TGATGTCTCATTTTTGGAAAAACAACT 58.960 29.630 0.00 0.00 40.33 3.16
421 422 8.791327 ATGTCTCATTTTTGGAAAAACAACTT 57.209 26.923 0.00 0.00 40.33 2.66
422 423 8.027440 TGTCTCATTTTTGGAAAAACAACTTG 57.973 30.769 0.00 0.00 40.33 3.16
423 424 7.659390 TGTCTCATTTTTGGAAAAACAACTTGT 59.341 29.630 0.00 0.00 40.33 3.16
424 425 7.956943 GTCTCATTTTTGGAAAAACAACTTGTG 59.043 33.333 0.00 0.00 40.33 3.33
425 426 7.875041 TCTCATTTTTGGAAAAACAACTTGTGA 59.125 29.630 0.00 0.00 40.33 3.58
426 427 7.801752 TCATTTTTGGAAAAACAACTTGTGAC 58.198 30.769 0.00 0.00 40.33 3.67
427 428 7.442364 TCATTTTTGGAAAAACAACTTGTGACA 59.558 29.630 0.00 0.00 40.33 3.58
428 429 7.736447 TTTTTGGAAAAACAACTTGTGACAT 57.264 28.000 0.00 0.00 33.29 3.06
429 430 8.833231 TTTTTGGAAAAACAACTTGTGACATA 57.167 26.923 0.00 0.00 33.29 2.29
430 431 8.833231 TTTTGGAAAAACAACTTGTGACATAA 57.167 26.923 0.00 0.00 0.00 1.90
431 432 7.820044 TTGGAAAAACAACTTGTGACATAAC 57.180 32.000 0.00 0.00 0.00 1.89
432 433 6.925211 TGGAAAAACAACTTGTGACATAACA 58.075 32.000 0.00 0.00 0.00 2.41
433 434 7.378966 TGGAAAAACAACTTGTGACATAACAA 58.621 30.769 0.00 0.00 37.71 2.83
434 435 7.329717 TGGAAAAACAACTTGTGACATAACAAC 59.670 33.333 0.00 0.00 35.16 3.32
435 436 7.329717 GGAAAAACAACTTGTGACATAACAACA 59.670 33.333 0.00 0.00 35.16 3.33
436 437 8.770438 AAAAACAACTTGTGACATAACAACAT 57.230 26.923 0.00 0.00 35.16 2.71
437 438 8.770438 AAAACAACTTGTGACATAACAACATT 57.230 26.923 0.00 0.00 35.16 2.71
438 439 7.754069 AACAACTTGTGACATAACAACATTG 57.246 32.000 0.00 0.00 37.22 2.82
439 440 6.862209 ACAACTTGTGACATAACAACATTGT 58.138 32.000 0.00 8.23 44.72 2.71
440 441 6.751425 ACAACTTGTGACATAACAACATTGTG 59.249 34.615 11.37 0.00 39.96 3.33
441 442 6.449635 ACTTGTGACATAACAACATTGTGT 57.550 33.333 0.00 0.00 41.31 3.72
442 443 7.561021 ACTTGTGACATAACAACATTGTGTA 57.439 32.000 0.00 0.00 41.31 2.90
443 444 8.165239 ACTTGTGACATAACAACATTGTGTAT 57.835 30.769 0.00 0.00 41.31 2.29
444 445 8.629158 ACTTGTGACATAACAACATTGTGTATT 58.371 29.630 0.00 0.00 41.31 1.89
471 472 7.878547 TCAATTCATATATTGGTGCTCAACA 57.121 32.000 0.00 0.00 38.31 3.33
472 473 8.467963 TCAATTCATATATTGGTGCTCAACAT 57.532 30.769 0.00 0.00 38.31 2.71
473 474 8.916062 TCAATTCATATATTGGTGCTCAACATT 58.084 29.630 0.00 0.00 38.31 2.71
474 475 9.537192 CAATTCATATATTGGTGCTCAACATTT 57.463 29.630 0.00 0.00 38.31 2.32
478 479 8.341903 TCATATATTGGTGCTCAACATTTAACG 58.658 33.333 0.00 0.00 38.31 3.18
479 480 4.846779 ATTGGTGCTCAACATTTAACGT 57.153 36.364 0.00 0.00 38.31 3.99
480 481 3.617540 TGGTGCTCAACATTTAACGTG 57.382 42.857 0.00 0.00 0.00 4.49
481 482 2.287308 TGGTGCTCAACATTTAACGTGC 60.287 45.455 0.00 0.00 0.00 5.34
482 483 1.969256 GTGCTCAACATTTAACGTGCG 59.031 47.619 0.00 0.00 0.00 5.34
483 484 1.600013 TGCTCAACATTTAACGTGCGT 59.400 42.857 0.00 0.00 0.00 5.24
484 485 2.032302 TGCTCAACATTTAACGTGCGTT 59.968 40.909 14.41 14.41 41.65 4.84
485 486 2.400408 GCTCAACATTTAACGTGCGTTG 59.600 45.455 18.63 6.43 38.92 4.10
486 487 2.376956 TCAACATTTAACGTGCGTTGC 58.623 42.857 18.63 0.00 38.92 4.17
487 488 2.112522 CAACATTTAACGTGCGTTGCA 58.887 42.857 18.63 6.56 38.92 4.08
488 489 2.697431 ACATTTAACGTGCGTTGCAT 57.303 40.000 18.63 8.41 41.91 3.96
628 663 5.547465 ACTGGATTTCGAAATGTGTGACTA 58.453 37.500 27.27 9.15 0.00 2.59
669 704 1.710809 AGGCAGGTTAGTCCCAAACAT 59.289 47.619 0.00 0.00 36.75 2.71
685 720 8.451748 GTCCCAAACATTTGAGTTAGAGAATAC 58.548 37.037 5.91 0.00 40.55 1.89
734 770 5.929992 AGACCAGTCGAATCATAAACGAAAA 59.070 36.000 0.00 0.00 37.77 2.29
736 772 6.772078 ACCAGTCGAATCATAAACGAAAATC 58.228 36.000 0.00 0.00 37.77 2.17
737 773 6.370442 ACCAGTCGAATCATAAACGAAAATCA 59.630 34.615 0.00 0.00 37.77 2.57
738 774 6.901887 CCAGTCGAATCATAAACGAAAATCAG 59.098 38.462 0.00 0.00 37.77 2.90
739 775 6.901887 CAGTCGAATCATAAACGAAAATCAGG 59.098 38.462 0.00 0.00 37.77 3.86
740 776 6.594159 AGTCGAATCATAAACGAAAATCAGGT 59.406 34.615 0.00 0.00 37.77 4.00
741 777 6.900299 GTCGAATCATAAACGAAAATCAGGTC 59.100 38.462 0.00 0.00 37.77 3.85
743 779 6.901887 CGAATCATAAACGAAAATCAGGTCTG 59.098 38.462 0.00 0.00 0.00 3.51
744 780 7.201522 CGAATCATAAACGAAAATCAGGTCTGA 60.202 37.037 2.93 2.93 44.59 3.27
758 794 6.486253 TCAGGTCTGATGAAGAAATTTTCG 57.514 37.500 3.57 0.00 36.40 3.46
759 795 5.412594 TCAGGTCTGATGAAGAAATTTTCGG 59.587 40.000 3.57 0.00 36.40 4.30
760 796 4.156739 AGGTCTGATGAAGAAATTTTCGGC 59.843 41.667 3.57 1.28 36.40 5.54
761 797 4.415735 GTCTGATGAAGAAATTTTCGGCC 58.584 43.478 3.57 0.00 36.40 6.13
762 798 4.156739 GTCTGATGAAGAAATTTTCGGCCT 59.843 41.667 0.00 0.00 36.40 5.19
763 799 4.156556 TCTGATGAAGAAATTTTCGGCCTG 59.843 41.667 0.00 0.00 34.02 4.85
764 800 4.078537 TGATGAAGAAATTTTCGGCCTGA 58.921 39.130 0.00 0.00 34.02 3.86
768 804 6.194796 TGAAGAAATTTTCGGCCTGATAAG 57.805 37.500 0.00 0.00 34.02 1.73
769 805 4.639135 AGAAATTTTCGGCCTGATAAGC 57.361 40.909 0.00 0.00 34.02 3.09
771 807 4.096984 AGAAATTTTCGGCCTGATAAGCAG 59.903 41.667 0.00 0.00 38.39 4.24
772 808 2.489938 TTTTCGGCCTGATAAGCAGT 57.510 45.000 0.00 0.00 43.33 4.40
775 811 3.838244 TTCGGCCTGATAAGCAGTAAT 57.162 42.857 0.00 0.00 43.33 1.89
776 812 3.838244 TCGGCCTGATAAGCAGTAATT 57.162 42.857 0.00 0.00 43.33 1.40
777 813 3.728845 TCGGCCTGATAAGCAGTAATTC 58.271 45.455 0.00 0.00 43.33 2.17
778 814 2.476619 CGGCCTGATAAGCAGTAATTCG 59.523 50.000 0.00 0.00 43.33 3.34
779 815 3.728845 GGCCTGATAAGCAGTAATTCGA 58.271 45.455 0.00 0.00 43.33 3.71
780 816 4.319177 GGCCTGATAAGCAGTAATTCGAT 58.681 43.478 0.00 0.00 43.33 3.59
781 817 4.757149 GGCCTGATAAGCAGTAATTCGATT 59.243 41.667 0.00 0.00 43.33 3.34
782 818 5.932303 GGCCTGATAAGCAGTAATTCGATTA 59.068 40.000 0.00 0.00 43.33 1.75
783 819 6.091441 GGCCTGATAAGCAGTAATTCGATTAG 59.909 42.308 0.00 0.00 43.33 1.73
784 820 6.091441 GCCTGATAAGCAGTAATTCGATTAGG 59.909 42.308 0.00 0.00 43.33 2.69
785 821 6.091441 CCTGATAAGCAGTAATTCGATTAGGC 59.909 42.308 0.00 0.00 43.33 3.93
786 822 5.932303 TGATAAGCAGTAATTCGATTAGGCC 59.068 40.000 0.00 0.00 30.61 5.19
787 823 2.755650 AGCAGTAATTCGATTAGGCCG 58.244 47.619 0.00 0.00 30.61 6.13
807 1025 4.174762 CCGGAAGAGCAGTAGTAAACTTC 58.825 47.826 0.00 0.00 35.76 3.01
809 1027 4.859798 CGGAAGAGCAGTAGTAAACTTCAG 59.140 45.833 0.00 0.00 35.76 3.02
822 1040 9.334693 GTAGTAAACTTCAGAAATGCAATTCAG 57.665 33.333 16.58 8.83 33.67 3.02
833 1051 6.889301 AAATGCAATTCAGTTCTGAAGAGA 57.111 33.333 18.03 5.49 33.67 3.10
835 1053 6.889301 ATGCAATTCAGTTCTGAAGAGAAA 57.111 33.333 18.03 6.01 40.00 2.52
836 1054 6.889301 TGCAATTCAGTTCTGAAGAGAAAT 57.111 33.333 18.03 0.96 40.00 2.17
837 1055 6.906659 TGCAATTCAGTTCTGAAGAGAAATC 58.093 36.000 18.03 6.25 40.00 2.17
838 1056 6.487668 TGCAATTCAGTTCTGAAGAGAAATCA 59.512 34.615 18.03 8.14 40.00 2.57
839 1057 7.022384 GCAATTCAGTTCTGAAGAGAAATCAG 58.978 38.462 18.03 0.00 44.53 2.90
854 1072 7.628234 AGAGAAATCAGAATTCTTCAAGCCTA 58.372 34.615 4.86 0.00 37.26 3.93
857 1075 6.998968 AATCAGAATTCTTCAAGCCTACAG 57.001 37.500 4.86 0.00 0.00 2.74
860 1078 6.533730 TCAGAATTCTTCAAGCCTACAGAAA 58.466 36.000 4.86 0.00 0.00 2.52
862 1080 7.173907 TCAGAATTCTTCAAGCCTACAGAAAAG 59.826 37.037 4.86 0.00 0.00 2.27
863 1081 7.001073 AGAATTCTTCAAGCCTACAGAAAAGT 58.999 34.615 0.88 0.00 0.00 2.66
864 1082 7.503902 AGAATTCTTCAAGCCTACAGAAAAGTT 59.496 33.333 0.88 0.00 0.00 2.66
865 1083 7.588497 ATTCTTCAAGCCTACAGAAAAGTTT 57.412 32.000 0.00 0.00 0.00 2.66
885 1103 1.127343 TTTCCTTGCTTTGGTTGGGG 58.873 50.000 0.00 0.00 0.00 4.96
886 1104 1.406860 TTCCTTGCTTTGGTTGGGGC 61.407 55.000 0.00 0.00 0.00 5.80
914 1132 4.034258 CAGCCTGCAGTGCAACGG 62.034 66.667 20.22 18.45 45.86 4.44
939 1157 1.827399 CGACACACTAAGGCCCCAGT 61.827 60.000 0.00 0.00 0.00 4.00
958 1176 3.113260 GTAGCAAGCTACTATGGTGGG 57.887 52.381 21.61 0.00 43.92 4.61
963 1181 0.764752 AGCTACTATGGTGGGCCCTC 60.765 60.000 25.70 20.64 0.00 4.30
1003 1221 7.600231 ATTTAATATCATTGTGGGCACATGA 57.400 32.000 0.00 0.00 41.52 3.07
1080 1298 0.466124 AGGCCGAGAAAGGTATGCTC 59.534 55.000 0.00 0.00 0.00 4.26
1085 1303 2.483889 CCGAGAAAGGTATGCTCCTTCC 60.484 54.545 8.38 0.00 45.79 3.46
1112 1330 2.637872 GCCTGGGTCTGGTTATATAGCA 59.362 50.000 0.00 0.00 0.00 3.49
1130 1351 4.856607 CGTCGCCTCCTTCCGCTC 62.857 72.222 0.00 0.00 0.00 5.03
1155 1376 1.590147 CGCGAGGTGGGACTAAACT 59.410 57.895 0.00 0.00 0.00 2.66
1182 1403 2.493501 CGCAGCAGAGCAGCTCTA 59.506 61.111 24.97 0.00 44.54 2.43
1202 1424 4.809958 TCTATGTTCCGTTCGTTGTTTTGA 59.190 37.500 0.00 0.00 0.00 2.69
1213 1452 0.753479 TTGTTTTGAGCTTGGGCCGA 60.753 50.000 0.00 0.00 39.73 5.54
1218 1457 1.172180 TTGAGCTTGGGCCGAAGTTG 61.172 55.000 26.07 5.17 39.73 3.16
1220 1459 1.301677 GAGCTTGGGCCGAAGTTGAG 61.302 60.000 26.07 4.21 39.73 3.02
1221 1460 1.600916 GCTTGGGCCGAAGTTGAGT 60.601 57.895 26.07 0.00 0.00 3.41
1223 1462 1.880646 GCTTGGGCCGAAGTTGAGTTA 60.881 52.381 26.07 0.00 0.00 2.24
1225 1464 2.178912 TGGGCCGAAGTTGAGTTAAG 57.821 50.000 0.00 0.00 0.00 1.85
1231 1470 2.076863 CGAAGTTGAGTTAAGGCCCAG 58.923 52.381 0.00 0.00 0.00 4.45
1232 1471 1.813178 GAAGTTGAGTTAAGGCCCAGC 59.187 52.381 0.00 0.00 0.00 4.85
1234 1473 1.355720 AGTTGAGTTAAGGCCCAGCAT 59.644 47.619 0.00 0.00 0.00 3.79
1251 1490 4.261909 CCAGCATAGATGGGCTTTTGATTC 60.262 45.833 0.00 0.00 38.56 2.52
1261 1500 4.582656 TGGGCTTTTGATTCCCATAATACG 59.417 41.667 0.00 0.00 44.62 3.06
1262 1501 4.022329 GGGCTTTTGATTCCCATAATACGG 60.022 45.833 0.00 0.00 39.82 4.02
1263 1502 4.546570 GCTTTTGATTCCCATAATACGGC 58.453 43.478 0.00 0.00 0.00 5.68
1264 1503 4.558697 GCTTTTGATTCCCATAATACGGCC 60.559 45.833 0.00 0.00 0.00 6.13
1265 1504 4.447138 TTTGATTCCCATAATACGGCCT 57.553 40.909 0.00 0.00 0.00 5.19
1266 1505 3.417069 TGATTCCCATAATACGGCCTG 57.583 47.619 0.00 0.00 0.00 4.85
1267 1506 2.976185 TGATTCCCATAATACGGCCTGA 59.024 45.455 0.00 0.00 0.00 3.86
1268 1507 2.922740 TTCCCATAATACGGCCTGAC 57.077 50.000 0.00 0.00 0.00 3.51
1269 1508 1.796017 TCCCATAATACGGCCTGACA 58.204 50.000 0.00 0.00 0.00 3.58
1270 1509 1.691976 TCCCATAATACGGCCTGACAG 59.308 52.381 0.00 0.00 0.00 3.51
1271 1510 1.416401 CCCATAATACGGCCTGACAGT 59.584 52.381 0.00 0.00 0.00 3.55
1272 1511 2.483876 CCATAATACGGCCTGACAGTG 58.516 52.381 0.00 0.00 0.00 3.66
1273 1512 2.483876 CATAATACGGCCTGACAGTGG 58.516 52.381 0.00 0.00 0.00 4.00
1274 1513 1.855295 TAATACGGCCTGACAGTGGA 58.145 50.000 0.00 0.00 0.00 4.02
1276 1515 0.249398 ATACGGCCTGACAGTGGAAC 59.751 55.000 0.00 0.00 0.00 3.62
1323 1599 6.659776 GTGCAACTACTAGTTCTCAAAAAGG 58.340 40.000 0.00 0.00 36.03 3.11
1324 1600 6.482308 GTGCAACTACTAGTTCTCAAAAAGGA 59.518 38.462 0.00 0.00 36.03 3.36
1325 1601 7.012044 GTGCAACTACTAGTTCTCAAAAAGGAA 59.988 37.037 0.00 0.00 36.03 3.36
1326 1602 7.554835 TGCAACTACTAGTTCTCAAAAAGGAAA 59.445 33.333 0.00 0.00 36.03 3.13
1360 1636 8.494236 GTGCAACTACTACAAATTCTCTTTTG 57.506 34.615 0.00 0.00 41.37 2.44
1362 1638 8.682710 TGCAACTACTACAAATTCTCTTTTGTT 58.317 29.630 7.75 0.00 45.14 2.83
1363 1639 9.516314 GCAACTACTACAAATTCTCTTTTGTTT 57.484 29.630 7.75 0.11 45.14 2.83
1368 1644 8.614994 ACTACAAATTCTCTTTTGTTTTCACG 57.385 30.769 7.75 0.00 45.14 4.35
1370 1646 6.099341 ACAAATTCTCTTTTGTTTTCACGCT 58.901 32.000 0.00 0.00 45.14 5.07
1372 1648 7.757624 ACAAATTCTCTTTTGTTTTCACGCTTA 59.242 29.630 0.00 0.00 45.14 3.09
1373 1649 7.679659 AATTCTCTTTTGTTTTCACGCTTAC 57.320 32.000 0.00 0.00 0.00 2.34
1374 1650 6.431198 TTCTCTTTTGTTTTCACGCTTACT 57.569 33.333 0.00 0.00 0.00 2.24
1378 1654 7.810759 TCTCTTTTGTTTTCACGCTTACTTTTT 59.189 29.630 0.00 0.00 0.00 1.94
1405 1707 8.532977 TGTTCTCAAAAAGAAAAGGAAAACTG 57.467 30.769 0.00 0.00 45.50 3.16
1408 1710 6.589907 TCTCAAAAAGAAAAGGAAAACTGCAC 59.410 34.615 0.00 0.00 0.00 4.57
1411 1713 3.420839 AGAAAAGGAAAACTGCACACG 57.579 42.857 0.00 0.00 0.00 4.49
1416 1718 1.940613 AGGAAAACTGCACACGTCTTC 59.059 47.619 0.00 0.00 0.00 2.87
1417 1719 1.002792 GGAAAACTGCACACGTCTTCC 60.003 52.381 0.00 0.00 0.00 3.46
1419 1721 1.299541 AAACTGCACACGTCTTCCTG 58.700 50.000 0.00 0.00 0.00 3.86
1425 1727 2.159448 TGCACACGTCTTCCTGTTTTTG 60.159 45.455 0.00 0.00 0.00 2.44
1431 1733 5.182380 ACACGTCTTCCTGTTTTTGAGAAAA 59.818 36.000 0.00 0.00 32.53 2.29
1432 1734 6.090129 CACGTCTTCCTGTTTTTGAGAAAAA 58.910 36.000 0.00 0.00 36.56 1.94
1433 1735 6.751888 CACGTCTTCCTGTTTTTGAGAAAAAT 59.248 34.615 0.00 0.00 41.85 1.82
1434 1736 7.275560 CACGTCTTCCTGTTTTTGAGAAAAATT 59.724 33.333 0.00 0.00 41.85 1.82
1449 1751 8.690203 TGAGAAAAATTATCCAGACAACTTGA 57.310 30.769 0.00 0.00 0.00 3.02
1460 1762 8.918202 ATCCAGACAACTTGAAAAATGTACTA 57.082 30.769 0.00 0.00 0.00 1.82
1466 1768 9.406828 GACAACTTGAAAAATGTACTATTTCCC 57.593 33.333 12.72 6.10 33.23 3.97
1475 1799 2.159099 TGTACTATTTCCCTGCAGCTCG 60.159 50.000 8.66 0.00 0.00 5.03
1495 1819 2.541556 GGCTGAACATCTAGGTCGAAC 58.458 52.381 0.00 0.00 36.45 3.95
1501 1825 1.893137 ACATCTAGGTCGAACAGTGCA 59.107 47.619 1.87 0.00 0.00 4.57
1503 1827 3.244078 ACATCTAGGTCGAACAGTGCAAA 60.244 43.478 1.87 0.00 0.00 3.68
1504 1828 2.750948 TCTAGGTCGAACAGTGCAAAC 58.249 47.619 1.87 0.00 0.00 2.93
1509 3430 3.942748 AGGTCGAACAGTGCAAACTTTTA 59.057 39.130 1.87 0.00 0.00 1.52
1510 3431 4.578928 AGGTCGAACAGTGCAAACTTTTAT 59.421 37.500 1.87 0.00 0.00 1.40
1517 3438 7.009174 CGAACAGTGCAAACTTTTATCAACTTT 59.991 33.333 0.00 0.00 0.00 2.66
1539 3460 9.148104 ACTTTAAATCATCCTCTGTTACGTTAC 57.852 33.333 0.00 0.00 0.00 2.50
1544 3465 5.232463 TCATCCTCTGTTACGTTACAAACC 58.768 41.667 8.90 0.00 0.00 3.27
1551 3472 4.521146 TGTTACGTTACAAACCCTTGGAA 58.479 39.130 4.66 0.00 36.82 3.53
1569 3490 7.013274 CCCTTGGAATTGTGTATGAAACGATAT 59.987 37.037 0.00 0.00 0.00 1.63
1574 3495 7.862372 GGAATTGTGTATGAAACGATATGCATT 59.138 33.333 3.54 0.00 0.00 3.56
1594 3515 7.706281 GCATTATTGCGTCATCTATATAGCT 57.294 36.000 4.75 0.00 39.49 3.32
1595 3516 7.562412 GCATTATTGCGTCATCTATATAGCTG 58.438 38.462 7.18 7.18 39.49 4.24
1646 5176 0.322098 TCGTTAGGCACCCACCAATG 60.322 55.000 0.00 0.00 0.00 2.82
1684 5214 3.490759 GGCATGTCGCTGTCCGTG 61.491 66.667 0.00 0.00 41.91 4.94
1686 5216 2.048222 CATGTCGCTGTCCGTGGT 60.048 61.111 0.00 0.00 38.35 4.16
1687 5217 2.094659 CATGTCGCTGTCCGTGGTC 61.095 63.158 0.00 0.00 38.35 4.02
1688 5218 3.626680 ATGTCGCTGTCCGTGGTCG 62.627 63.158 0.00 0.00 38.35 4.79
1731 5270 1.368641 CCAAGATCATGGCGACGAAA 58.631 50.000 3.62 0.00 32.78 3.46
1754 5293 2.121786 GTCAAGCTGTTCGACGTGTTA 58.878 47.619 0.00 0.00 0.00 2.41
1756 5295 3.183775 GTCAAGCTGTTCGACGTGTTATT 59.816 43.478 0.00 0.00 0.00 1.40
1758 5297 1.459592 AGCTGTTCGACGTGTTATTGC 59.540 47.619 0.00 0.00 0.00 3.56
1766 5305 3.687212 TCGACGTGTTATTGCCATCATTT 59.313 39.130 0.00 0.00 0.00 2.32
1804 5345 6.040278 AGAGAGTGATATATATCATGGTGGCG 59.960 42.308 24.62 0.00 43.82 5.69
1856 5397 0.882927 CTTGCCGGACCGAGTGAAAA 60.883 55.000 17.49 0.00 0.00 2.29
1861 5402 1.137513 CGGACCGAGTGAAAAGTGAC 58.862 55.000 8.64 0.00 0.00 3.67
1890 5431 0.948623 TAAGCGCGTTGTGACATGCT 60.949 50.000 8.43 3.17 37.45 3.79
1891 5432 2.448153 AAGCGCGTTGTGACATGCTG 62.448 55.000 8.43 4.11 36.40 4.41
1892 5433 2.938253 CGCGTTGTGACATGCTGT 59.062 55.556 0.00 0.00 0.00 4.40
1893 5434 1.279539 CGCGTTGTGACATGCTGTT 59.720 52.632 0.00 0.00 0.00 3.16
1894 5435 0.722469 CGCGTTGTGACATGCTGTTC 60.722 55.000 0.00 0.00 0.00 3.18
1895 5436 0.588252 GCGTTGTGACATGCTGTTCT 59.412 50.000 3.44 0.00 0.00 3.01
1896 5437 1.398960 GCGTTGTGACATGCTGTTCTC 60.399 52.381 3.44 0.00 0.00 2.87
1897 5438 1.195448 CGTTGTGACATGCTGTTCTCC 59.805 52.381 0.00 0.00 0.00 3.71
1898 5439 2.498167 GTTGTGACATGCTGTTCTCCT 58.502 47.619 0.00 0.00 0.00 3.69
1899 5440 2.462456 TGTGACATGCTGTTCTCCTC 57.538 50.000 0.00 0.00 0.00 3.71
1900 5441 1.337167 TGTGACATGCTGTTCTCCTCG 60.337 52.381 0.00 0.00 0.00 4.63
1901 5442 0.390340 TGACATGCTGTTCTCCTCGC 60.390 55.000 0.00 0.00 0.00 5.03
1902 5443 1.078848 ACATGCTGTTCTCCTCGCC 60.079 57.895 0.00 0.00 0.00 5.54
1903 5444 1.220206 CATGCTGTTCTCCTCGCCT 59.780 57.895 0.00 0.00 0.00 5.52
1904 5445 0.461548 CATGCTGTTCTCCTCGCCTA 59.538 55.000 0.00 0.00 0.00 3.93
1905 5446 0.461961 ATGCTGTTCTCCTCGCCTAC 59.538 55.000 0.00 0.00 0.00 3.18
1906 5447 0.612174 TGCTGTTCTCCTCGCCTACT 60.612 55.000 0.00 0.00 0.00 2.57
1907 5448 1.340697 TGCTGTTCTCCTCGCCTACTA 60.341 52.381 0.00 0.00 0.00 1.82
1908 5449 1.749634 GCTGTTCTCCTCGCCTACTAA 59.250 52.381 0.00 0.00 0.00 2.24
1909 5450 2.165845 GCTGTTCTCCTCGCCTACTAAA 59.834 50.000 0.00 0.00 0.00 1.85
1910 5451 3.771798 CTGTTCTCCTCGCCTACTAAAC 58.228 50.000 0.00 0.00 0.00 2.01
1911 5452 3.428532 TGTTCTCCTCGCCTACTAAACT 58.571 45.455 0.00 0.00 0.00 2.66
1912 5453 4.592942 TGTTCTCCTCGCCTACTAAACTA 58.407 43.478 0.00 0.00 0.00 2.24
1913 5454 5.012239 TGTTCTCCTCGCCTACTAAACTAA 58.988 41.667 0.00 0.00 0.00 2.24
1914 5455 5.125097 TGTTCTCCTCGCCTACTAAACTAAG 59.875 44.000 0.00 0.00 0.00 2.18
1915 5456 3.631227 TCTCCTCGCCTACTAAACTAAGC 59.369 47.826 0.00 0.00 0.00 3.09
1916 5457 3.359033 TCCTCGCCTACTAAACTAAGCA 58.641 45.455 0.00 0.00 0.00 3.91
1917 5458 3.129988 TCCTCGCCTACTAAACTAAGCAC 59.870 47.826 0.00 0.00 0.00 4.40
1918 5459 3.106672 CTCGCCTACTAAACTAAGCACG 58.893 50.000 0.00 0.00 0.00 5.34
1919 5460 1.587034 CGCCTACTAAACTAAGCACGC 59.413 52.381 0.00 0.00 0.00 5.34
1920 5461 1.587034 GCCTACTAAACTAAGCACGCG 59.413 52.381 3.53 3.53 0.00 6.01
1921 5462 1.587034 CCTACTAAACTAAGCACGCGC 59.413 52.381 5.73 0.00 38.99 6.86
1922 5463 2.256174 CTACTAAACTAAGCACGCGCA 58.744 47.619 5.73 0.00 42.27 6.09
1923 5464 0.788391 ACTAAACTAAGCACGCGCAC 59.212 50.000 5.73 0.00 42.27 5.34
1924 5465 0.787787 CTAAACTAAGCACGCGCACA 59.212 50.000 5.73 0.00 42.27 4.57
1925 5466 0.509499 TAAACTAAGCACGCGCACAC 59.491 50.000 5.73 0.00 42.27 3.82
1926 5467 2.424576 AAACTAAGCACGCGCACACG 62.425 55.000 5.73 0.00 42.27 4.49
1928 5469 2.050259 TAAGCACGCGCACACGTA 60.050 55.556 5.73 0.00 46.34 3.57
1929 5470 2.262187 CTAAGCACGCGCACACGTAC 62.262 60.000 5.73 0.00 46.34 3.67
1930 5471 4.934942 AGCACGCGCACACGTACA 62.935 61.111 5.73 0.00 46.34 2.90
1931 5472 3.773630 GCACGCGCACACGTACAT 61.774 61.111 5.73 0.00 46.34 2.29
1932 5473 2.093799 CACGCGCACACGTACATG 59.906 61.111 5.73 0.00 46.34 3.21
1933 5474 3.773630 ACGCGCACACGTACATGC 61.774 61.111 5.73 8.22 46.19 4.06
1934 5475 3.772560 CGCGCACACGTACATGCA 61.773 61.111 8.75 0.00 42.17 3.96
1935 5476 2.096406 GCGCACACGTACATGCAG 59.904 61.111 16.15 10.84 42.17 4.41
1936 5477 2.379634 GCGCACACGTACATGCAGA 61.380 57.895 16.15 0.00 42.17 4.26
1937 5478 1.416049 CGCACACGTACATGCAGAC 59.584 57.895 16.15 0.00 42.17 3.51
1938 5479 1.416049 GCACACGTACATGCAGACG 59.584 57.895 14.83 14.83 44.57 4.18
1943 5484 3.927088 CGTACATGCAGACGTGTTG 57.073 52.632 0.00 0.00 43.67 3.33
1944 5485 0.438445 CGTACATGCAGACGTGTTGG 59.562 55.000 0.00 0.00 43.67 3.77
1945 5486 1.790755 GTACATGCAGACGTGTTGGA 58.209 50.000 0.00 0.00 43.67 3.53
1946 5487 1.726791 GTACATGCAGACGTGTTGGAG 59.273 52.381 0.00 0.00 43.67 3.86
1947 5488 0.392706 ACATGCAGACGTGTTGGAGA 59.607 50.000 0.00 0.00 43.67 3.71
1948 5489 1.002430 ACATGCAGACGTGTTGGAGAT 59.998 47.619 0.00 0.00 43.67 2.75
1949 5490 1.395954 CATGCAGACGTGTTGGAGATG 59.604 52.381 0.00 0.00 0.00 2.90
1950 5491 0.678950 TGCAGACGTGTTGGAGATGA 59.321 50.000 0.00 0.00 0.00 2.92
1951 5492 1.276138 TGCAGACGTGTTGGAGATGAT 59.724 47.619 0.00 0.00 0.00 2.45
1952 5493 2.495669 TGCAGACGTGTTGGAGATGATA 59.504 45.455 0.00 0.00 0.00 2.15
1953 5494 3.132824 TGCAGACGTGTTGGAGATGATAT 59.867 43.478 0.00 0.00 0.00 1.63
1954 5495 3.492383 GCAGACGTGTTGGAGATGATATG 59.508 47.826 0.00 0.00 0.00 1.78
1955 5496 4.737649 GCAGACGTGTTGGAGATGATATGA 60.738 45.833 0.00 0.00 0.00 2.15
1956 5497 5.351458 CAGACGTGTTGGAGATGATATGAA 58.649 41.667 0.00 0.00 0.00 2.57
1957 5498 5.812127 CAGACGTGTTGGAGATGATATGAAA 59.188 40.000 0.00 0.00 0.00 2.69
1958 5499 6.313658 CAGACGTGTTGGAGATGATATGAAAA 59.686 38.462 0.00 0.00 0.00 2.29
1959 5500 6.878923 AGACGTGTTGGAGATGATATGAAAAA 59.121 34.615 0.00 0.00 0.00 1.94
1960 5501 7.554118 AGACGTGTTGGAGATGATATGAAAAAT 59.446 33.333 0.00 0.00 0.00 1.82
1961 5502 8.731275 ACGTGTTGGAGATGATATGAAAAATA 57.269 30.769 0.00 0.00 0.00 1.40
1962 5503 9.173021 ACGTGTTGGAGATGATATGAAAAATAA 57.827 29.630 0.00 0.00 0.00 1.40
1963 5504 9.438291 CGTGTTGGAGATGATATGAAAAATAAC 57.562 33.333 0.00 0.00 0.00 1.89
1966 5507 9.956720 GTTGGAGATGATATGAAAAATAACAGG 57.043 33.333 0.00 0.00 0.00 4.00
1967 5508 9.919416 TTGGAGATGATATGAAAAATAACAGGA 57.081 29.630 0.00 0.00 0.00 3.86
1968 5509 9.565090 TGGAGATGATATGAAAAATAACAGGAG 57.435 33.333 0.00 0.00 0.00 3.69
1969 5510 9.784531 GGAGATGATATGAAAAATAACAGGAGA 57.215 33.333 0.00 0.00 0.00 3.71
1974 5515 9.904198 TGATATGAAAAATAACAGGAGATCACA 57.096 29.630 0.00 0.00 0.00 3.58
1977 5518 6.913170 TGAAAAATAACAGGAGATCACAAGC 58.087 36.000 0.00 0.00 0.00 4.01
1978 5519 6.716628 TGAAAAATAACAGGAGATCACAAGCT 59.283 34.615 0.00 0.00 0.00 3.74
1979 5520 6.749923 AAAATAACAGGAGATCACAAGCTC 57.250 37.500 0.00 0.00 37.19 4.09
1980 5521 5.426689 AATAACAGGAGATCACAAGCTCA 57.573 39.130 0.00 0.00 39.77 4.26
1981 5522 3.777106 AACAGGAGATCACAAGCTCAA 57.223 42.857 0.00 0.00 39.77 3.02
1982 5523 3.331478 ACAGGAGATCACAAGCTCAAG 57.669 47.619 0.00 0.00 39.77 3.02
1983 5524 2.902486 ACAGGAGATCACAAGCTCAAGA 59.098 45.455 0.00 0.00 39.77 3.02
1984 5525 3.055963 ACAGGAGATCACAAGCTCAAGAG 60.056 47.826 0.00 0.00 39.77 2.85
1985 5526 3.055963 CAGGAGATCACAAGCTCAAGAGT 60.056 47.826 0.00 0.00 39.77 3.24
1986 5527 3.055963 AGGAGATCACAAGCTCAAGAGTG 60.056 47.826 0.00 0.00 39.77 3.51
1987 5528 3.056250 GGAGATCACAAGCTCAAGAGTGA 60.056 47.826 0.00 0.00 44.16 3.41
1988 5529 4.562347 GGAGATCACAAGCTCAAGAGTGAA 60.562 45.833 9.07 0.00 43.38 3.18
1989 5530 5.163281 AGATCACAAGCTCAAGAGTGAAT 57.837 39.130 9.07 1.52 43.38 2.57
1990 5531 4.936411 AGATCACAAGCTCAAGAGTGAATG 59.064 41.667 9.07 0.00 43.38 2.67
1991 5532 4.341366 TCACAAGCTCAAGAGTGAATGA 57.659 40.909 0.00 0.00 37.99 2.57
1992 5533 4.707105 TCACAAGCTCAAGAGTGAATGAA 58.293 39.130 0.00 0.00 37.99 2.57
1993 5534 5.311265 TCACAAGCTCAAGAGTGAATGAAT 58.689 37.500 0.00 0.00 37.99 2.57
1994 5535 5.180680 TCACAAGCTCAAGAGTGAATGAATG 59.819 40.000 0.00 0.00 37.99 2.67
1995 5536 5.048921 CACAAGCTCAAGAGTGAATGAATGT 60.049 40.000 0.00 0.00 33.99 2.71
1996 5537 5.533903 ACAAGCTCAAGAGTGAATGAATGTT 59.466 36.000 0.00 0.00 31.88 2.71
1997 5538 5.876612 AGCTCAAGAGTGAATGAATGTTC 57.123 39.130 0.00 0.00 31.88 3.18
1998 5539 5.311265 AGCTCAAGAGTGAATGAATGTTCA 58.689 37.500 0.00 0.00 42.14 3.18
1999 5540 5.411977 AGCTCAAGAGTGAATGAATGTTCAG 59.588 40.000 1.65 0.00 41.08 3.02
2000 5541 5.410746 GCTCAAGAGTGAATGAATGTTCAGA 59.589 40.000 1.65 0.00 41.08 3.27
2001 5542 6.620303 GCTCAAGAGTGAATGAATGTTCAGAC 60.620 42.308 1.65 0.00 41.08 3.51
2002 5543 5.406477 TCAAGAGTGAATGAATGTTCAGACG 59.594 40.000 1.65 0.00 41.08 4.18
2003 5544 4.248859 AGAGTGAATGAATGTTCAGACGG 58.751 43.478 1.65 0.00 41.08 4.79
2004 5545 4.021104 AGAGTGAATGAATGTTCAGACGGA 60.021 41.667 1.65 0.00 41.08 4.69
2005 5546 3.997021 AGTGAATGAATGTTCAGACGGAC 59.003 43.478 1.65 0.00 41.08 4.79
2006 5547 2.993220 TGAATGAATGTTCAGACGGACG 59.007 45.455 1.65 0.00 41.08 4.79
2007 5548 2.743636 ATGAATGTTCAGACGGACGT 57.256 45.000 0.00 0.00 41.08 4.34
2008 5549 1.778334 TGAATGTTCAGACGGACGTG 58.222 50.000 0.53 0.00 32.50 4.49
2009 5550 0.438830 GAATGTTCAGACGGACGTGC 59.561 55.000 0.53 0.00 0.00 5.34
2010 5551 1.282248 AATGTTCAGACGGACGTGCG 61.282 55.000 28.33 28.33 0.00 5.34
2011 5552 3.764049 GTTCAGACGGACGTGCGC 61.764 66.667 29.80 20.97 0.00 6.09
2024 5565 4.371590 TGCGCGCCAGCAACTAGA 62.372 61.111 30.77 1.61 45.06 2.43
2025 5566 3.118454 GCGCGCCAGCAACTAGAA 61.118 61.111 23.24 0.00 45.49 2.10
2026 5567 3.084579 CGCGCCAGCAACTAGAAG 58.915 61.111 0.00 0.00 45.49 2.85
2027 5568 2.456119 CGCGCCAGCAACTAGAAGG 61.456 63.158 0.00 0.00 45.49 3.46
2028 5569 1.079127 GCGCCAGCAACTAGAAGGA 60.079 57.895 0.00 0.00 44.35 3.36
2029 5570 1.362406 GCGCCAGCAACTAGAAGGAC 61.362 60.000 0.00 0.00 44.35 3.85
2030 5571 0.037326 CGCCAGCAACTAGAAGGACA 60.037 55.000 0.00 0.00 0.00 4.02
2031 5572 1.731720 GCCAGCAACTAGAAGGACAG 58.268 55.000 0.00 0.00 0.00 3.51
2032 5573 1.731720 CCAGCAACTAGAAGGACAGC 58.268 55.000 0.00 0.00 0.00 4.40
2033 5574 1.277557 CCAGCAACTAGAAGGACAGCT 59.722 52.381 0.00 0.00 0.00 4.24
2034 5575 2.344950 CAGCAACTAGAAGGACAGCTG 58.655 52.381 13.48 13.48 41.45 4.24
2035 5576 1.082690 GCAACTAGAAGGACAGCTGC 58.917 55.000 15.27 6.61 0.00 5.25
2036 5577 1.354040 CAACTAGAAGGACAGCTGCG 58.646 55.000 15.27 0.00 0.00 5.18
2037 5578 0.247736 AACTAGAAGGACAGCTGCGG 59.752 55.000 15.27 0.00 0.00 5.69
2038 5579 0.900647 ACTAGAAGGACAGCTGCGGT 60.901 55.000 15.27 4.80 0.00 5.68
2039 5580 0.459237 CTAGAAGGACAGCTGCGGTG 60.459 60.000 15.27 0.00 37.06 4.94
2040 5581 2.507110 TAGAAGGACAGCTGCGGTGC 62.507 60.000 15.27 15.84 34.04 5.01
2041 5582 4.254709 AAGGACAGCTGCGGTGCA 62.255 61.111 23.88 0.00 34.04 4.57
2042 5583 3.557903 AAGGACAGCTGCGGTGCAT 62.558 57.895 23.88 11.46 38.13 3.96
2043 5584 3.503363 GGACAGCTGCGGTGCATC 61.503 66.667 18.30 1.14 38.13 3.91
2044 5585 3.857854 GACAGCTGCGGTGCATCG 61.858 66.667 16.79 16.79 38.13 3.84
2045 5586 4.377708 ACAGCTGCGGTGCATCGA 62.378 61.111 26.37 7.48 38.13 3.59
2046 5587 3.561213 CAGCTGCGGTGCATCGAG 61.561 66.667 26.37 18.04 38.13 4.04
2047 5588 3.763356 AGCTGCGGTGCATCGAGA 61.763 61.111 26.37 7.52 38.13 4.04
2048 5589 2.587194 GCTGCGGTGCATCGAGAT 60.587 61.111 26.37 0.00 38.13 2.75
2049 5590 2.176273 GCTGCGGTGCATCGAGATT 61.176 57.895 26.37 0.00 38.13 2.40
2050 5591 1.930100 CTGCGGTGCATCGAGATTC 59.070 57.895 26.37 5.10 38.13 2.52
2051 5592 0.807275 CTGCGGTGCATCGAGATTCA 60.807 55.000 26.37 10.16 38.13 2.57
2052 5593 1.083806 TGCGGTGCATCGAGATTCAC 61.084 55.000 26.37 3.41 34.84 3.18
2053 5594 0.807667 GCGGTGCATCGAGATTCACT 60.808 55.000 26.37 0.00 35.70 3.41
2054 5595 1.536072 GCGGTGCATCGAGATTCACTA 60.536 52.381 26.37 0.00 35.70 2.74
2055 5596 2.389059 CGGTGCATCGAGATTCACTAG 58.611 52.381 15.97 6.64 35.70 2.57
2056 5597 2.131183 GGTGCATCGAGATTCACTAGC 58.869 52.381 13.70 0.99 35.70 3.42
2057 5598 1.783711 GTGCATCGAGATTCACTAGCG 59.216 52.381 8.27 0.00 33.24 4.26
2058 5599 1.676006 TGCATCGAGATTCACTAGCGA 59.324 47.619 0.00 0.00 35.32 4.93
2059 5600 2.294512 TGCATCGAGATTCACTAGCGAT 59.705 45.455 0.00 0.00 41.78 4.58
2062 5603 4.837896 ATCGAGATTCACTAGCGATGAA 57.162 40.909 0.00 3.32 39.85 2.57
2063 5604 4.837896 TCGAGATTCACTAGCGATGAAT 57.162 40.909 11.44 11.44 46.93 2.57
2064 5605 5.941948 TCGAGATTCACTAGCGATGAATA 57.058 39.130 11.55 0.00 44.85 1.75
2065 5606 5.932661 TCGAGATTCACTAGCGATGAATAG 58.067 41.667 11.55 7.86 44.85 1.73
2066 5607 5.701290 TCGAGATTCACTAGCGATGAATAGA 59.299 40.000 11.55 9.44 44.85 1.98
2067 5608 6.372937 TCGAGATTCACTAGCGATGAATAGAT 59.627 38.462 11.55 3.79 44.85 1.98
2068 5609 7.549488 TCGAGATTCACTAGCGATGAATAGATA 59.451 37.037 11.55 0.00 44.85 1.98
2069 5610 8.341903 CGAGATTCACTAGCGATGAATAGATAT 58.658 37.037 11.55 0.00 44.85 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
1 2 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
2 3 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
3 4 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
4 5 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
5 6 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
6 7 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
7 8 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
8 9 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
9 10 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
10 11 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
11 12 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
12 13 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
13 14 2.090943 ACATATACTCCCTCCGTCCCAA 60.091 50.000 0.00 0.00 0.00 4.12
14 15 1.502039 ACATATACTCCCTCCGTCCCA 59.498 52.381 0.00 0.00 0.00 4.37
15 16 2.299297 CAACATATACTCCCTCCGTCCC 59.701 54.545 0.00 0.00 0.00 4.46
16 17 3.228453 TCAACATATACTCCCTCCGTCC 58.772 50.000 0.00 0.00 0.00 4.79
17 18 5.470047 AATCAACATATACTCCCTCCGTC 57.530 43.478 0.00 0.00 0.00 4.79
18 19 5.888982 AAATCAACATATACTCCCTCCGT 57.111 39.130 0.00 0.00 0.00 4.69
19 20 7.442656 AGTTAAATCAACATATACTCCCTCCG 58.557 38.462 0.00 0.00 39.81 4.63
20 21 9.708092 GTAGTTAAATCAACATATACTCCCTCC 57.292 37.037 0.00 0.00 39.81 4.30
23 24 9.708092 GGAGTAGTTAAATCAACATATACTCCC 57.292 37.037 14.37 1.13 45.75 4.30
27 28 9.708092 GGAGGGAGTAGTTAAATCAACATATAC 57.292 37.037 0.00 0.00 39.81 1.47
28 29 8.582437 CGGAGGGAGTAGTTAAATCAACATATA 58.418 37.037 0.00 0.00 39.81 0.86
29 30 7.070821 ACGGAGGGAGTAGTTAAATCAACATAT 59.929 37.037 0.00 0.00 39.81 1.78
30 31 6.381994 ACGGAGGGAGTAGTTAAATCAACATA 59.618 38.462 0.00 0.00 39.81 2.29
31 32 5.189145 ACGGAGGGAGTAGTTAAATCAACAT 59.811 40.000 0.00 0.00 39.81 2.71
32 33 4.529377 ACGGAGGGAGTAGTTAAATCAACA 59.471 41.667 0.00 0.00 39.81 3.33
33 34 5.082251 ACGGAGGGAGTAGTTAAATCAAC 57.918 43.478 0.00 0.00 37.41 3.18
34 35 5.337813 GGAACGGAGGGAGTAGTTAAATCAA 60.338 44.000 0.00 0.00 0.00 2.57
35 36 4.161001 GGAACGGAGGGAGTAGTTAAATCA 59.839 45.833 0.00 0.00 0.00 2.57
36 37 4.405036 AGGAACGGAGGGAGTAGTTAAATC 59.595 45.833 0.00 0.00 0.00 2.17
37 38 4.359996 AGGAACGGAGGGAGTAGTTAAAT 58.640 43.478 0.00 0.00 0.00 1.40
38 39 3.782992 AGGAACGGAGGGAGTAGTTAAA 58.217 45.455 0.00 0.00 0.00 1.52
39 40 3.463048 AGGAACGGAGGGAGTAGTTAA 57.537 47.619 0.00 0.00 0.00 2.01
40 41 4.591321 TTAGGAACGGAGGGAGTAGTTA 57.409 45.455 0.00 0.00 0.00 2.24
41 42 3.463048 TTAGGAACGGAGGGAGTAGTT 57.537 47.619 0.00 0.00 0.00 2.24
42 43 3.463048 TTTAGGAACGGAGGGAGTAGT 57.537 47.619 0.00 0.00 0.00 2.73
43 44 7.393841 CTATATTTAGGAACGGAGGGAGTAG 57.606 44.000 0.00 0.00 0.00 2.57
64 65 9.442047 CTTGTTGAAATCTCTACAAAGACCTAT 57.558 33.333 0.00 0.00 43.56 2.57
65 66 8.429641 ACTTGTTGAAATCTCTACAAAGACCTA 58.570 33.333 0.00 0.00 43.56 3.08
66 67 7.227512 CACTTGTTGAAATCTCTACAAAGACCT 59.772 37.037 0.00 0.00 43.56 3.85
67 68 7.226720 TCACTTGTTGAAATCTCTACAAAGACC 59.773 37.037 0.00 0.00 43.56 3.85
68 69 8.064814 GTCACTTGTTGAAATCTCTACAAAGAC 58.935 37.037 10.49 10.49 43.56 3.01
69 70 7.987458 AGTCACTTGTTGAAATCTCTACAAAGA 59.013 33.333 0.00 0.00 43.56 2.52
70 71 8.147642 AGTCACTTGTTGAAATCTCTACAAAG 57.852 34.615 0.00 0.00 43.56 2.77
71 72 9.042008 GTAGTCACTTGTTGAAATCTCTACAAA 57.958 33.333 0.00 0.00 43.56 2.83
72 73 8.201464 TGTAGTCACTTGTTGAAATCTCTACAA 58.799 33.333 0.00 0.00 42.53 2.41
73 74 7.722363 TGTAGTCACTTGTTGAAATCTCTACA 58.278 34.615 0.00 0.00 36.87 2.74
74 75 8.764524 ATGTAGTCACTTGTTGAAATCTCTAC 57.235 34.615 0.00 0.00 35.39 2.59
75 76 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
76 77 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
77 78 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
78 79 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
79 80 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
80 81 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
81 82 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
82 83 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
83 84 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
84 85 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
85 86 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
86 87 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
87 88 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
88 89 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
89 90 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
90 91 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
91 92 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
92 93 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
93 94 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
94 95 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
95 96 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
96 97 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
97 98 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
98 99 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
99 100 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
100 101 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
101 102 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
102 103 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
103 104 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
114 115 8.894768 AGCCATATTTTAGAGTGTAGATTCAC 57.105 34.615 0.00 0.00 38.46 3.18
132 133 9.439461 ACCACATACAGATGTATATAGCCATAT 57.561 33.333 5.21 0.00 44.82 1.78
133 134 8.695456 CACCACATACAGATGTATATAGCCATA 58.305 37.037 5.21 0.00 44.82 2.74
134 135 7.365028 CCACCACATACAGATGTATATAGCCAT 60.365 40.741 5.21 0.00 44.82 4.40
135 136 6.070824 CCACCACATACAGATGTATATAGCCA 60.071 42.308 5.21 0.00 44.82 4.75
136 137 6.070767 ACCACCACATACAGATGTATATAGCC 60.071 42.308 5.21 0.00 44.82 3.93
137 138 6.936279 ACCACCACATACAGATGTATATAGC 58.064 40.000 5.21 0.00 44.82 2.97
138 139 7.178451 TGGACCACCACATACAGATGTATATAG 59.822 40.741 5.21 0.75 44.82 1.31
139 140 7.013834 TGGACCACCACATACAGATGTATATA 58.986 38.462 5.21 0.00 44.82 0.86
140 141 5.843969 TGGACCACCACATACAGATGTATAT 59.156 40.000 5.21 0.00 44.82 0.86
141 142 5.212745 TGGACCACCACATACAGATGTATA 58.787 41.667 5.21 0.00 44.82 1.47
142 143 4.037222 TGGACCACCACATACAGATGTAT 58.963 43.478 0.00 0.00 44.82 2.29
143 144 3.445987 TGGACCACCACATACAGATGTA 58.554 45.455 0.00 0.00 44.82 2.29
156 157 6.834168 TTTAGAGATTTCAAATGGACCACC 57.166 37.500 0.00 0.00 0.00 4.61
193 194 9.369672 AGATAAAGATATACTCCCTTCGTTCTT 57.630 33.333 0.00 0.00 0.00 2.52
194 195 8.943594 AGATAAAGATATACTCCCTTCGTTCT 57.056 34.615 0.00 0.00 0.00 3.01
195 196 9.984190 AAAGATAAAGATATACTCCCTTCGTTC 57.016 33.333 0.00 0.00 0.00 3.95
220 221 8.802267 CAATGGATAACTGGAACCTTAGAAAAA 58.198 33.333 0.00 0.00 0.00 1.94
221 222 7.093945 GCAATGGATAACTGGAACCTTAGAAAA 60.094 37.037 0.00 0.00 0.00 2.29
222 223 6.377146 GCAATGGATAACTGGAACCTTAGAAA 59.623 38.462 0.00 0.00 0.00 2.52
223 224 5.885912 GCAATGGATAACTGGAACCTTAGAA 59.114 40.000 0.00 0.00 0.00 2.10
224 225 5.191722 AGCAATGGATAACTGGAACCTTAGA 59.808 40.000 0.00 0.00 0.00 2.10
225 226 5.440610 AGCAATGGATAACTGGAACCTTAG 58.559 41.667 0.00 0.00 0.00 2.18
226 227 5.450818 AGCAATGGATAACTGGAACCTTA 57.549 39.130 0.00 0.00 0.00 2.69
227 228 4.322057 AGCAATGGATAACTGGAACCTT 57.678 40.909 0.00 0.00 0.00 3.50
228 229 4.322057 AAGCAATGGATAACTGGAACCT 57.678 40.909 0.00 0.00 0.00 3.50
229 230 6.321181 TCATTAAGCAATGGATAACTGGAACC 59.679 38.462 0.00 0.00 41.66 3.62
230 231 7.333528 TCATTAAGCAATGGATAACTGGAAC 57.666 36.000 0.00 0.00 41.66 3.62
231 232 9.812347 ATATCATTAAGCAATGGATAACTGGAA 57.188 29.630 0.00 0.00 41.66 3.53
232 233 9.812347 AATATCATTAAGCAATGGATAACTGGA 57.188 29.630 0.00 0.00 41.66 3.86
239 240 9.524496 TGCTCTAAATATCATTAAGCAATGGAT 57.476 29.630 0.00 0.00 41.66 3.41
240 241 8.922931 TGCTCTAAATATCATTAAGCAATGGA 57.077 30.769 0.00 0.00 41.66 3.41
273 274 3.066369 TCAGTACGTCGAGATGCAATC 57.934 47.619 0.00 0.00 46.04 2.67
274 275 3.179830 GTTCAGTACGTCGAGATGCAAT 58.820 45.455 0.00 0.00 0.00 3.56
275 276 2.030628 TGTTCAGTACGTCGAGATGCAA 60.031 45.455 0.00 0.00 0.00 4.08
276 277 1.538075 TGTTCAGTACGTCGAGATGCA 59.462 47.619 0.00 0.00 0.00 3.96
277 278 1.912110 GTGTTCAGTACGTCGAGATGC 59.088 52.381 0.00 0.00 0.00 3.91
278 279 3.197434 TGTGTTCAGTACGTCGAGATG 57.803 47.619 0.00 0.00 0.00 2.90
279 280 4.166523 CAATGTGTTCAGTACGTCGAGAT 58.833 43.478 0.00 0.00 0.00 2.75
280 281 3.561503 CAATGTGTTCAGTACGTCGAGA 58.438 45.455 0.00 0.00 0.00 4.04
281 282 2.090658 GCAATGTGTTCAGTACGTCGAG 59.909 50.000 0.00 0.00 0.00 4.04
282 283 2.055838 GCAATGTGTTCAGTACGTCGA 58.944 47.619 0.00 0.00 0.00 4.20
283 284 1.790043 TGCAATGTGTTCAGTACGTCG 59.210 47.619 0.00 0.00 0.00 5.12
284 285 3.363970 CCTTGCAATGTGTTCAGTACGTC 60.364 47.826 0.00 0.00 0.00 4.34
285 286 2.548057 CCTTGCAATGTGTTCAGTACGT 59.452 45.455 0.00 0.00 0.00 3.57
286 287 2.548057 ACCTTGCAATGTGTTCAGTACG 59.452 45.455 6.57 0.00 0.00 3.67
287 288 4.290155 CAACCTTGCAATGTGTTCAGTAC 58.710 43.478 8.20 0.00 0.00 2.73
288 289 4.566545 CAACCTTGCAATGTGTTCAGTA 57.433 40.909 8.20 0.00 0.00 2.74
289 290 3.441496 CAACCTTGCAATGTGTTCAGT 57.559 42.857 8.20 0.00 0.00 3.41
322 323 8.951243 GGCTGTAAAAGAATCAGAAATCTAGTT 58.049 33.333 0.00 0.00 0.00 2.24
323 324 8.325046 AGGCTGTAAAAGAATCAGAAATCTAGT 58.675 33.333 0.00 0.00 0.00 2.57
324 325 8.729805 AGGCTGTAAAAGAATCAGAAATCTAG 57.270 34.615 0.00 0.00 0.00 2.43
325 326 9.601217 GTAGGCTGTAAAAGAATCAGAAATCTA 57.399 33.333 0.00 0.00 0.00 1.98
326 327 8.325046 AGTAGGCTGTAAAAGAATCAGAAATCT 58.675 33.333 0.00 0.00 0.00 2.40
327 328 8.499403 AGTAGGCTGTAAAAGAATCAGAAATC 57.501 34.615 0.00 0.00 0.00 2.17
328 329 9.606631 CTAGTAGGCTGTAAAAGAATCAGAAAT 57.393 33.333 0.00 0.00 0.00 2.17
329 330 8.812972 TCTAGTAGGCTGTAAAAGAATCAGAAA 58.187 33.333 0.00 0.00 0.00 2.52
330 331 8.362464 TCTAGTAGGCTGTAAAAGAATCAGAA 57.638 34.615 0.00 0.00 0.00 3.02
331 332 7.956328 TCTAGTAGGCTGTAAAAGAATCAGA 57.044 36.000 0.00 0.00 0.00 3.27
332 333 8.035394 TGTTCTAGTAGGCTGTAAAAGAATCAG 58.965 37.037 0.00 0.00 0.00 2.90
333 334 7.817962 GTGTTCTAGTAGGCTGTAAAAGAATCA 59.182 37.037 0.00 0.00 0.00 2.57
334 335 7.817962 TGTGTTCTAGTAGGCTGTAAAAGAATC 59.182 37.037 0.00 0.00 0.00 2.52
335 336 7.676947 TGTGTTCTAGTAGGCTGTAAAAGAAT 58.323 34.615 0.00 0.00 0.00 2.40
336 337 7.014905 TCTGTGTTCTAGTAGGCTGTAAAAGAA 59.985 37.037 0.00 0.00 0.00 2.52
337 338 6.492429 TCTGTGTTCTAGTAGGCTGTAAAAGA 59.508 38.462 0.00 0.00 0.00 2.52
338 339 6.688578 TCTGTGTTCTAGTAGGCTGTAAAAG 58.311 40.000 0.00 0.00 0.00 2.27
339 340 6.659745 TCTGTGTTCTAGTAGGCTGTAAAA 57.340 37.500 0.00 0.00 0.00 1.52
340 341 6.659745 TTCTGTGTTCTAGTAGGCTGTAAA 57.340 37.500 0.00 0.00 0.00 2.01
341 342 6.852420 ATTCTGTGTTCTAGTAGGCTGTAA 57.148 37.500 0.00 0.00 0.00 2.41
342 343 9.809395 ATATATTCTGTGTTCTAGTAGGCTGTA 57.191 33.333 0.00 0.00 0.00 2.74
343 344 8.713708 ATATATTCTGTGTTCTAGTAGGCTGT 57.286 34.615 0.00 0.00 0.00 4.40
394 395 8.040132 AGTTGTTTTTCCAAAAATGAGACATCA 58.960 29.630 0.71 0.00 39.75 3.07
395 396 8.424274 AGTTGTTTTTCCAAAAATGAGACATC 57.576 30.769 0.71 0.00 39.75 3.06
396 397 8.667463 CAAGTTGTTTTTCCAAAAATGAGACAT 58.333 29.630 0.71 0.00 39.75 3.06
397 398 7.659390 ACAAGTTGTTTTTCCAAAAATGAGACA 59.341 29.630 1.64 0.00 39.75 3.41
398 399 7.956943 CACAAGTTGTTTTTCCAAAAATGAGAC 59.043 33.333 5.57 0.00 39.75 3.36
399 400 7.875041 TCACAAGTTGTTTTTCCAAAAATGAGA 59.125 29.630 5.57 0.00 39.75 3.27
400 401 7.956943 GTCACAAGTTGTTTTTCCAAAAATGAG 59.043 33.333 5.57 0.00 39.75 2.90
401 402 7.442364 TGTCACAAGTTGTTTTTCCAAAAATGA 59.558 29.630 5.57 0.00 39.75 2.57
402 403 7.579726 TGTCACAAGTTGTTTTTCCAAAAATG 58.420 30.769 5.57 0.00 39.75 2.32
403 404 7.736447 TGTCACAAGTTGTTTTTCCAAAAAT 57.264 28.000 5.57 0.00 39.75 1.82
404 405 7.736447 ATGTCACAAGTTGTTTTTCCAAAAA 57.264 28.000 5.57 0.00 35.67 1.94
405 406 8.713271 GTTATGTCACAAGTTGTTTTTCCAAAA 58.287 29.630 5.57 0.00 0.00 2.44
406 407 7.872993 TGTTATGTCACAAGTTGTTTTTCCAAA 59.127 29.630 5.57 0.00 0.00 3.28
407 408 7.378966 TGTTATGTCACAAGTTGTTTTTCCAA 58.621 30.769 5.57 0.00 0.00 3.53
408 409 6.925211 TGTTATGTCACAAGTTGTTTTTCCA 58.075 32.000 5.57 0.00 0.00 3.53
409 410 7.329717 TGTTGTTATGTCACAAGTTGTTTTTCC 59.670 33.333 5.57 0.00 37.33 3.13
410 411 8.233692 TGTTGTTATGTCACAAGTTGTTTTTC 57.766 30.769 5.57 0.00 37.33 2.29
411 412 8.770438 ATGTTGTTATGTCACAAGTTGTTTTT 57.230 26.923 5.57 0.00 37.33 1.94
412 413 8.655092 CAATGTTGTTATGTCACAAGTTGTTTT 58.345 29.630 5.57 0.00 37.33 2.43
413 414 7.816995 ACAATGTTGTTATGTCACAAGTTGTTT 59.183 29.630 5.57 0.00 40.40 2.83
414 415 7.275341 CACAATGTTGTTATGTCACAAGTTGTT 59.725 33.333 5.57 0.00 40.84 2.83
415 416 6.751425 CACAATGTTGTTATGTCACAAGTTGT 59.249 34.615 1.64 1.64 42.11 3.32
416 417 6.751425 ACACAATGTTGTTATGTCACAAGTTG 59.249 34.615 0.00 0.00 39.91 3.16
417 418 6.862209 ACACAATGTTGTTATGTCACAAGTT 58.138 32.000 0.00 0.00 39.91 2.66
418 419 6.449635 ACACAATGTTGTTATGTCACAAGT 57.550 33.333 0.00 0.00 39.91 3.16
445 446 8.916062 TGTTGAGCACCAATATATGAATTGATT 58.084 29.630 0.55 0.00 38.84 2.57
446 447 8.467963 TGTTGAGCACCAATATATGAATTGAT 57.532 30.769 0.55 0.00 38.84 2.57
447 448 7.878547 TGTTGAGCACCAATATATGAATTGA 57.121 32.000 0.55 0.00 38.84 2.57
448 449 9.537192 AAATGTTGAGCACCAATATATGAATTG 57.463 29.630 2.54 0.00 35.85 2.32
452 453 8.341903 CGTTAAATGTTGAGCACCAATATATGA 58.658 33.333 2.54 0.00 35.85 2.15
453 454 8.128582 ACGTTAAATGTTGAGCACCAATATATG 58.871 33.333 2.54 0.00 35.85 1.78
454 455 8.128582 CACGTTAAATGTTGAGCACCAATATAT 58.871 33.333 0.00 0.00 35.85 0.86
455 456 7.468441 CACGTTAAATGTTGAGCACCAATATA 58.532 34.615 0.00 0.00 35.85 0.86
456 457 6.321717 CACGTTAAATGTTGAGCACCAATAT 58.678 36.000 0.00 0.00 38.08 1.28
457 458 5.694816 CACGTTAAATGTTGAGCACCAATA 58.305 37.500 0.00 0.00 37.08 1.90
458 459 4.545610 CACGTTAAATGTTGAGCACCAAT 58.454 39.130 0.00 0.00 37.08 3.16
459 460 3.793801 GCACGTTAAATGTTGAGCACCAA 60.794 43.478 0.00 0.00 0.00 3.67
460 461 2.287308 GCACGTTAAATGTTGAGCACCA 60.287 45.455 0.00 0.00 0.00 4.17
461 462 2.315901 GCACGTTAAATGTTGAGCACC 58.684 47.619 0.00 0.00 0.00 5.01
462 463 1.969256 CGCACGTTAAATGTTGAGCAC 59.031 47.619 0.00 0.00 0.00 4.40
463 464 1.600013 ACGCACGTTAAATGTTGAGCA 59.400 42.857 0.00 0.00 0.00 4.26
464 465 2.309898 ACGCACGTTAAATGTTGAGC 57.690 45.000 0.00 0.00 0.00 4.26
465 466 2.400408 GCAACGCACGTTAAATGTTGAG 59.600 45.455 8.26 0.00 41.76 3.02
466 467 2.223272 TGCAACGCACGTTAAATGTTGA 60.223 40.909 8.26 3.07 41.76 3.18
467 468 2.112522 TGCAACGCACGTTAAATGTTG 58.887 42.857 8.26 9.50 42.04 3.33
468 469 2.476873 TGCAACGCACGTTAAATGTT 57.523 40.000 8.26 0.00 36.46 2.71
469 470 2.287308 ACATGCAACGCACGTTAAATGT 60.287 40.909 20.84 20.84 43.04 2.71
470 471 2.088816 CACATGCAACGCACGTTAAATG 59.911 45.455 19.94 19.94 43.04 2.32
471 472 2.315011 CACATGCAACGCACGTTAAAT 58.685 42.857 8.26 2.68 43.04 1.40
472 473 1.747956 CACATGCAACGCACGTTAAA 58.252 45.000 8.26 0.24 43.04 1.52
473 474 0.658829 GCACATGCAACGCACGTTAA 60.659 50.000 8.26 0.61 43.04 2.01
474 475 1.082431 GCACATGCAACGCACGTTA 60.082 52.632 8.26 0.00 43.04 3.18
475 476 2.353376 GCACATGCAACGCACGTT 60.353 55.556 1.93 1.93 43.04 3.99
555 565 7.580007 ACAATAATATACTCCCTCCGGTTTTT 58.420 34.615 0.00 0.00 0.00 1.94
556 566 7.145474 ACAATAATATACTCCCTCCGGTTTT 57.855 36.000 0.00 0.00 0.00 2.43
557 567 6.517864 CGACAATAATATACTCCCTCCGGTTT 60.518 42.308 0.00 0.00 0.00 3.27
558 568 5.047519 CGACAATAATATACTCCCTCCGGTT 60.048 44.000 0.00 0.00 0.00 4.44
559 569 4.461781 CGACAATAATATACTCCCTCCGGT 59.538 45.833 0.00 0.00 0.00 5.28
560 570 4.703575 TCGACAATAATATACTCCCTCCGG 59.296 45.833 0.00 0.00 0.00 5.14
561 571 5.392811 GGTCGACAATAATATACTCCCTCCG 60.393 48.000 18.91 0.00 0.00 4.63
562 572 5.479375 TGGTCGACAATAATATACTCCCTCC 59.521 44.000 18.91 0.00 0.00 4.30
563 573 6.585695 TGGTCGACAATAATATACTCCCTC 57.414 41.667 18.91 0.00 0.00 4.30
564 574 6.989155 TTGGTCGACAATAATATACTCCCT 57.011 37.500 18.91 0.00 33.18 4.20
565 575 7.215085 ACTTTGGTCGACAATAATATACTCCC 58.785 38.462 18.91 0.00 39.21 4.30
567 577 9.095065 ACAACTTTGGTCGACAATAATATACTC 57.905 33.333 18.91 0.00 39.21 2.59
628 663 2.785269 TGGTTGGATATGATTGGCCTCT 59.215 45.455 3.32 0.00 0.00 3.69
656 691 7.741785 TCTCTAACTCAAATGTTTGGGACTAA 58.258 34.615 12.05 0.00 41.16 2.24
657 692 7.311092 TCTCTAACTCAAATGTTTGGGACTA 57.689 36.000 12.05 2.97 41.16 2.59
669 704 9.970553 TCCTGTACTAGTATTCTCTAACTCAAA 57.029 33.333 5.75 0.00 0.00 2.69
685 720 4.586421 TGATGGATGCTTCTCCTGTACTAG 59.414 45.833 1.88 0.00 36.20 2.57
691 726 3.626670 GTCTTTGATGGATGCTTCTCCTG 59.373 47.826 1.88 0.00 36.20 3.86
694 729 3.614092 TGGTCTTTGATGGATGCTTCTC 58.386 45.455 1.88 0.00 0.00 2.87
736 772 5.634896 CCGAAAATTTCTTCATCAGACCTG 58.365 41.667 4.09 0.00 0.00 4.00
737 773 4.156739 GCCGAAAATTTCTTCATCAGACCT 59.843 41.667 4.09 0.00 0.00 3.85
738 774 4.415735 GCCGAAAATTTCTTCATCAGACC 58.584 43.478 4.09 0.00 0.00 3.85
739 775 4.156739 AGGCCGAAAATTTCTTCATCAGAC 59.843 41.667 4.09 0.00 0.00 3.51
740 776 4.156556 CAGGCCGAAAATTTCTTCATCAGA 59.843 41.667 4.09 0.00 0.00 3.27
741 777 4.156556 TCAGGCCGAAAATTTCTTCATCAG 59.843 41.667 4.09 0.00 0.00 2.90
743 779 4.701956 TCAGGCCGAAAATTTCTTCATC 57.298 40.909 4.09 0.00 0.00 2.92
744 780 6.681368 GCTTATCAGGCCGAAAATTTCTTCAT 60.681 38.462 4.09 0.00 0.00 2.57
745 781 5.393027 GCTTATCAGGCCGAAAATTTCTTCA 60.393 40.000 4.09 0.00 0.00 3.02
746 782 5.037385 GCTTATCAGGCCGAAAATTTCTTC 58.963 41.667 4.09 0.00 0.00 2.87
747 783 4.462483 TGCTTATCAGGCCGAAAATTTCTT 59.538 37.500 4.09 0.00 0.00 2.52
749 785 4.354587 CTGCTTATCAGGCCGAAAATTTC 58.645 43.478 0.00 0.00 39.15 2.17
750 786 4.376340 CTGCTTATCAGGCCGAAAATTT 57.624 40.909 0.00 0.00 39.15 1.82
762 798 5.932303 GGCCTAATCGAATTACTGCTTATCA 59.068 40.000 0.00 0.00 0.00 2.15
763 799 5.062308 CGGCCTAATCGAATTACTGCTTATC 59.938 44.000 0.00 0.00 0.00 1.75
764 800 4.929808 CGGCCTAATCGAATTACTGCTTAT 59.070 41.667 0.00 0.00 0.00 1.73
768 804 1.798813 CCGGCCTAATCGAATTACTGC 59.201 52.381 0.00 0.00 0.00 4.40
769 805 3.380479 TCCGGCCTAATCGAATTACTG 57.620 47.619 0.00 0.00 0.00 2.74
771 807 3.986277 TCTTCCGGCCTAATCGAATTAC 58.014 45.455 0.00 0.00 0.00 1.89
772 808 3.554337 GCTCTTCCGGCCTAATCGAATTA 60.554 47.826 0.00 0.00 0.00 1.40
775 811 0.104304 GCTCTTCCGGCCTAATCGAA 59.896 55.000 0.00 0.00 0.00 3.71
776 812 1.040893 TGCTCTTCCGGCCTAATCGA 61.041 55.000 0.00 0.00 0.00 3.59
777 813 0.598680 CTGCTCTTCCGGCCTAATCG 60.599 60.000 0.00 0.00 0.00 3.34
778 814 0.466124 ACTGCTCTTCCGGCCTAATC 59.534 55.000 0.00 0.00 0.00 1.75
779 815 1.689273 CTACTGCTCTTCCGGCCTAAT 59.311 52.381 0.00 0.00 0.00 1.73
780 816 1.112113 CTACTGCTCTTCCGGCCTAA 58.888 55.000 0.00 0.00 0.00 2.69
781 817 0.033405 ACTACTGCTCTTCCGGCCTA 60.033 55.000 0.00 0.00 0.00 3.93
782 818 0.033405 TACTACTGCTCTTCCGGCCT 60.033 55.000 0.00 0.00 0.00 5.19
783 819 0.822164 TTACTACTGCTCTTCCGGCC 59.178 55.000 0.00 0.00 0.00 6.13
784 820 2.094130 AGTTTACTACTGCTCTTCCGGC 60.094 50.000 0.00 0.00 35.19 6.13
785 821 3.870633 AGTTTACTACTGCTCTTCCGG 57.129 47.619 0.00 0.00 35.19 5.14
786 822 4.806330 TGAAGTTTACTACTGCTCTTCCG 58.194 43.478 0.00 0.00 37.12 4.30
787 823 6.026947 TCTGAAGTTTACTACTGCTCTTCC 57.973 41.667 0.00 0.00 37.12 3.46
840 1058 7.588497 AACTTTTCTGTAGGCTTGAAGAATT 57.412 32.000 0.00 0.00 0.00 2.17
864 1082 2.092699 CCCCAACCAAAGCAAGGAAAAA 60.093 45.455 0.00 0.00 0.00 1.94
865 1083 1.488393 CCCCAACCAAAGCAAGGAAAA 59.512 47.619 0.00 0.00 0.00 2.29
870 1088 2.339712 CGCCCCAACCAAAGCAAG 59.660 61.111 0.00 0.00 0.00 4.01
900 1118 4.034258 CAGCCGTTGCACTGCAGG 62.034 66.667 19.93 8.27 40.61 4.85
914 1132 1.741770 CCTTAGTGTGTCGCCCAGC 60.742 63.158 0.00 0.00 0.00 4.85
918 1136 2.436115 GGGCCTTAGTGTGTCGCC 60.436 66.667 0.84 0.00 38.96 5.54
926 1144 0.912486 CTTGCTACTGGGGCCTTAGT 59.088 55.000 16.11 16.11 0.00 2.24
927 1145 0.464554 GCTTGCTACTGGGGCCTTAG 60.465 60.000 0.84 5.05 0.00 2.18
928 1146 0.914417 AGCTTGCTACTGGGGCCTTA 60.914 55.000 0.84 0.00 0.00 2.69
939 1157 1.416401 GCCCACCATAGTAGCTTGCTA 59.584 52.381 0.00 0.00 0.00 3.49
996 1214 3.198409 TCTGATATGTGGGTCATGTGC 57.802 47.619 0.00 0.00 37.91 4.57
1031 1249 7.650104 GGCTAAGATCAAGTGTAGTATCTGTTC 59.350 40.741 0.00 0.00 0.00 3.18
1172 1393 2.197577 GAACGGAACATAGAGCTGCTC 58.802 52.381 21.72 21.72 0.00 4.26
1174 1395 0.924090 CGAACGGAACATAGAGCTGC 59.076 55.000 0.00 0.00 0.00 5.25
1182 1403 3.790789 GCTCAAAACAACGAACGGAACAT 60.791 43.478 0.00 0.00 0.00 2.71
1202 1424 1.302832 CTCAACTTCGGCCCAAGCT 60.303 57.895 10.36 0.00 39.73 3.74
1213 1452 1.144913 TGCTGGGCCTTAACTCAACTT 59.855 47.619 4.53 0.00 0.00 2.66
1218 1457 3.406764 CATCTATGCTGGGCCTTAACTC 58.593 50.000 4.53 0.00 0.00 3.01
1220 1459 2.508526 CCATCTATGCTGGGCCTTAAC 58.491 52.381 4.53 0.00 0.00 2.01
1221 1460 1.425066 CCCATCTATGCTGGGCCTTAA 59.575 52.381 4.53 0.00 46.62 1.85
1223 1462 1.849116 CCCATCTATGCTGGGCCTT 59.151 57.895 4.53 0.00 46.62 4.35
1231 1470 3.006217 GGGAATCAAAAGCCCATCTATGC 59.994 47.826 0.00 0.00 41.64 3.14
1232 1471 4.217510 TGGGAATCAAAAGCCCATCTATG 58.782 43.478 0.00 0.00 46.57 2.23
1244 1483 4.141287 CAGGCCGTATTATGGGAATCAAA 58.859 43.478 0.00 0.00 0.00 2.69
1245 1484 3.392947 TCAGGCCGTATTATGGGAATCAA 59.607 43.478 0.00 0.00 0.00 2.57
1251 1490 1.416401 ACTGTCAGGCCGTATTATGGG 59.584 52.381 4.53 0.00 0.00 4.00
1254 1493 2.394632 TCCACTGTCAGGCCGTATTAT 58.605 47.619 4.53 0.00 0.00 1.28
1258 1497 0.830444 AGTTCCACTGTCAGGCCGTA 60.830 55.000 4.53 0.00 0.00 4.02
1259 1498 0.830444 TAGTTCCACTGTCAGGCCGT 60.830 55.000 4.53 0.00 0.00 5.68
1260 1499 0.108615 CTAGTTCCACTGTCAGGCCG 60.109 60.000 4.53 0.00 0.00 6.13
1261 1500 0.977395 ACTAGTTCCACTGTCAGGCC 59.023 55.000 4.53 0.00 0.00 5.19
1262 1501 2.826725 AGTACTAGTTCCACTGTCAGGC 59.173 50.000 0.00 0.00 0.00 4.85
1263 1502 6.777213 AATAGTACTAGTTCCACTGTCAGG 57.223 41.667 8.85 0.00 0.00 3.86
1291 1530 5.869888 AGAACTAGTAGTTGCACTTACATGC 59.130 40.000 20.21 1.52 46.32 4.06
1292 1531 7.090808 TGAGAACTAGTAGTTGCACTTACATG 58.909 38.462 20.21 0.00 38.80 3.21
1293 1532 7.228314 TGAGAACTAGTAGTTGCACTTACAT 57.772 36.000 20.21 0.00 38.80 2.29
1295 1534 7.941795 TTTGAGAACTAGTAGTTGCACTTAC 57.058 36.000 20.21 4.11 38.80 2.34
1299 1538 6.482308 TCCTTTTTGAGAACTAGTAGTTGCAC 59.518 38.462 20.21 10.98 38.80 4.57
1300 1539 6.588204 TCCTTTTTGAGAACTAGTAGTTGCA 58.412 36.000 20.21 14.23 38.80 4.08
1301 1540 7.492352 TTCCTTTTTGAGAACTAGTAGTTGC 57.508 36.000 20.21 11.95 38.80 4.17
1326 1602 6.995511 TTGTAGTAGTTGCACTGTCTTTTT 57.004 33.333 0.00 0.00 0.00 1.94
1331 1607 6.647067 AGAGAATTTGTAGTAGTTGCACTGTC 59.353 38.462 0.00 0.00 0.00 3.51
1332 1608 6.525629 AGAGAATTTGTAGTAGTTGCACTGT 58.474 36.000 0.00 0.00 0.00 3.55
1347 1623 6.573617 AGCGTGAAAACAAAAGAGAATTTG 57.426 33.333 0.00 0.00 44.11 2.32
1348 1624 7.973944 AGTAAGCGTGAAAACAAAAGAGAATTT 59.026 29.630 0.00 0.00 0.00 1.82
1349 1625 7.480810 AGTAAGCGTGAAAACAAAAGAGAATT 58.519 30.769 0.00 0.00 0.00 2.17
1350 1626 7.027778 AGTAAGCGTGAAAACAAAAGAGAAT 57.972 32.000 0.00 0.00 0.00 2.40
1351 1627 6.431198 AGTAAGCGTGAAAACAAAAGAGAA 57.569 33.333 0.00 0.00 0.00 2.87
1353 1629 7.506296 AAAAGTAAGCGTGAAAACAAAAGAG 57.494 32.000 0.00 0.00 0.00 2.85
1354 1630 7.876896 AAAAAGTAAGCGTGAAAACAAAAGA 57.123 28.000 0.00 0.00 0.00 2.52
1378 1654 9.554395 AGTTTTCCTTTTCTTTTTGAGAACAAA 57.446 25.926 0.00 0.00 43.90 2.83
1381 1657 7.117667 TGCAGTTTTCCTTTTCTTTTTGAGAAC 59.882 33.333 0.00 0.00 43.90 3.01
1384 1660 6.368516 TGTGCAGTTTTCCTTTTCTTTTTGAG 59.631 34.615 0.00 0.00 0.00 3.02
1385 1661 6.147000 GTGTGCAGTTTTCCTTTTCTTTTTGA 59.853 34.615 0.00 0.00 0.00 2.69
1386 1662 6.306397 GTGTGCAGTTTTCCTTTTCTTTTTG 58.694 36.000 0.00 0.00 0.00 2.44
1387 1663 5.120053 CGTGTGCAGTTTTCCTTTTCTTTTT 59.880 36.000 0.00 0.00 0.00 1.94
1388 1664 4.625311 CGTGTGCAGTTTTCCTTTTCTTTT 59.375 37.500 0.00 0.00 0.00 2.27
1389 1665 4.173256 CGTGTGCAGTTTTCCTTTTCTTT 58.827 39.130 0.00 0.00 0.00 2.52
1392 1668 3.105937 GACGTGTGCAGTTTTCCTTTTC 58.894 45.455 0.00 0.00 0.00 2.29
1393 1669 2.752903 AGACGTGTGCAGTTTTCCTTTT 59.247 40.909 0.00 0.00 0.00 2.27
1394 1670 2.365582 AGACGTGTGCAGTTTTCCTTT 58.634 42.857 0.00 0.00 0.00 3.11
1395 1671 2.038387 AGACGTGTGCAGTTTTCCTT 57.962 45.000 0.00 0.00 0.00 3.36
1397 1673 1.002792 GGAAGACGTGTGCAGTTTTCC 60.003 52.381 10.05 10.05 42.80 3.13
1398 1674 1.940613 AGGAAGACGTGTGCAGTTTTC 59.059 47.619 0.00 0.00 33.56 2.29
1399 1675 1.670811 CAGGAAGACGTGTGCAGTTTT 59.329 47.619 0.00 0.00 0.00 2.43
1403 1705 1.299541 AAACAGGAAGACGTGTGCAG 58.700 50.000 0.00 0.00 42.99 4.41
1405 1707 2.096819 TCAAAAACAGGAAGACGTGTGC 59.903 45.455 0.00 0.00 42.99 4.57
1408 1710 4.875544 TTCTCAAAAACAGGAAGACGTG 57.124 40.909 0.00 0.00 37.82 4.49
1416 1718 9.196552 GTCTGGATAATTTTTCTCAAAAACAGG 57.803 33.333 0.00 0.00 42.57 4.00
1417 1719 9.748708 TGTCTGGATAATTTTTCTCAAAAACAG 57.251 29.630 0.00 1.00 42.57 3.16
1425 1727 9.965824 TTTCAAGTTGTCTGGATAATTTTTCTC 57.034 29.630 2.11 0.00 0.00 2.87
1433 1735 9.349713 AGTACATTTTTCAAGTTGTCTGGATAA 57.650 29.630 2.11 0.00 0.00 1.75
1434 1736 8.918202 AGTACATTTTTCAAGTTGTCTGGATA 57.082 30.769 2.11 0.00 0.00 2.59
1446 1748 7.531857 TGCAGGGAAATAGTACATTTTTCAA 57.468 32.000 13.66 0.00 32.30 2.69
1449 1751 5.716703 AGCTGCAGGGAAATAGTACATTTTT 59.283 36.000 17.12 0.00 0.00 1.94
1454 1756 2.159099 CGAGCTGCAGGGAAATAGTACA 60.159 50.000 17.12 0.00 0.00 2.90
1460 1762 2.439156 GCCGAGCTGCAGGGAAAT 60.439 61.111 17.12 0.00 0.00 2.17
1475 1799 2.094182 TGTTCGACCTAGATGTTCAGCC 60.094 50.000 0.00 0.00 0.00 4.85
1509 3430 8.883731 CGTAACAGAGGATGATTTAAAGTTGAT 58.116 33.333 0.00 0.00 0.00 2.57
1510 3431 7.876068 ACGTAACAGAGGATGATTTAAAGTTGA 59.124 33.333 0.00 0.00 0.00 3.18
1517 3438 8.928733 GTTTGTAACGTAACAGAGGATGATTTA 58.071 33.333 0.00 0.00 0.00 1.40
1521 3442 5.232463 GGTTTGTAACGTAACAGAGGATGA 58.768 41.667 0.00 0.00 0.00 2.92
1522 3443 4.390909 GGGTTTGTAACGTAACAGAGGATG 59.609 45.833 0.00 0.00 0.00 3.51
1523 3444 4.285260 AGGGTTTGTAACGTAACAGAGGAT 59.715 41.667 0.00 0.00 0.00 3.24
1533 3454 3.955551 ACAATTCCAAGGGTTTGTAACGT 59.044 39.130 5.99 0.00 32.01 3.99
1539 3460 5.720371 TCATACACAATTCCAAGGGTTTG 57.280 39.130 0.00 0.00 0.00 2.93
1544 3465 5.621197 TCGTTTCATACACAATTCCAAGG 57.379 39.130 0.00 0.00 0.00 3.61
1569 3490 7.223387 CAGCTATATAGATGACGCAATAATGCA 59.777 37.037 20.96 0.00 46.29 3.96
1574 3495 5.451937 GGCCAGCTATATAGATGACGCAATA 60.452 44.000 25.91 0.00 41.99 1.90
1580 3501 4.026744 TCCAGGCCAGCTATATAGATGAC 58.973 47.826 25.91 16.44 41.99 3.06
1582 3503 4.469227 ACTTCCAGGCCAGCTATATAGATG 59.531 45.833 19.07 19.07 39.31 2.90
1585 3506 4.142049 GCTACTTCCAGGCCAGCTATATAG 60.142 50.000 5.01 5.30 0.00 1.31
1586 3507 3.769844 GCTACTTCCAGGCCAGCTATATA 59.230 47.826 5.01 0.00 0.00 0.86
1587 3508 2.569404 GCTACTTCCAGGCCAGCTATAT 59.431 50.000 5.01 0.00 0.00 0.86
1588 3509 1.971357 GCTACTTCCAGGCCAGCTATA 59.029 52.381 5.01 0.00 0.00 1.31
1590 3511 1.676678 CGCTACTTCCAGGCCAGCTA 61.677 60.000 5.01 0.00 0.00 3.32
1592 3513 2.512515 CGCTACTTCCAGGCCAGC 60.513 66.667 5.01 1.39 0.00 4.85
1593 3514 2.512515 GCGCTACTTCCAGGCCAG 60.513 66.667 5.01 0.00 0.00 4.85
1594 3515 3.003173 AGCGCTACTTCCAGGCCA 61.003 61.111 8.99 0.00 0.00 5.36
1595 3516 2.512515 CAGCGCTACTTCCAGGCC 60.513 66.667 10.99 0.00 0.00 5.19
1646 5176 3.128068 CCGAGTTTTATAAACCCAGCACC 59.872 47.826 0.00 0.00 0.00 5.01
1650 5180 4.398044 ACATGCCGAGTTTTATAAACCCAG 59.602 41.667 0.00 0.00 0.00 4.45
1690 5220 3.554692 GGAACCATCGTCGCGCTG 61.555 66.667 5.56 0.00 0.00 5.18
1691 5221 3.371097 ATGGAACCATCGTCGCGCT 62.371 57.895 5.56 0.00 29.42 5.92
1692 5222 2.871427 GATGGAACCATCGTCGCGC 61.871 63.158 16.46 0.00 42.55 6.86
1725 5264 2.411547 CGAACAGCTTGACCATTTCGTC 60.412 50.000 0.00 0.00 33.02 4.20
1731 5270 0.033504 ACGTCGAACAGCTTGACCAT 59.966 50.000 0.00 0.00 0.00 3.55
1777 5316 7.686371 GCCACCATGATATATATCACTCTCTGG 60.686 44.444 26.68 26.68 44.66 3.86
1782 5321 4.747108 GCGCCACCATGATATATATCACTC 59.253 45.833 24.39 10.89 44.66 3.51
1786 5325 3.059884 CCGCGCCACCATGATATATATC 58.940 50.000 14.77 14.77 0.00 1.63
1792 5331 3.399105 AAGCCGCGCCACCATGATA 62.399 57.895 0.00 0.00 0.00 2.15
1793 5332 4.802051 AAGCCGCGCCACCATGAT 62.802 61.111 0.00 0.00 0.00 2.45
1812 5353 2.781923 TGTCAATTGCTAGCTTGCTCA 58.218 42.857 20.64 11.90 0.00 4.26
1814 5355 3.087031 ACATGTCAATTGCTAGCTTGCT 58.913 40.909 20.64 0.00 0.00 3.91
1822 5363 2.352030 CGGCAAGAACATGTCAATTGCT 60.352 45.455 27.57 3.60 44.33 3.91
1823 5364 1.987770 CGGCAAGAACATGTCAATTGC 59.012 47.619 23.89 23.89 44.21 3.56
1856 5397 2.609737 GCGCTTACTTGTACTGGTCACT 60.610 50.000 0.00 0.00 0.00 3.41
1861 5402 1.126113 CAACGCGCTTACTTGTACTGG 59.874 52.381 5.73 0.00 0.00 4.00
1890 5431 3.428532 AGTTTAGTAGGCGAGGAGAACA 58.571 45.455 0.00 0.00 0.00 3.18
1891 5432 5.573337 TTAGTTTAGTAGGCGAGGAGAAC 57.427 43.478 0.00 0.00 0.00 3.01
1892 5433 4.097589 GCTTAGTTTAGTAGGCGAGGAGAA 59.902 45.833 0.00 0.00 0.00 2.87
1893 5434 3.631227 GCTTAGTTTAGTAGGCGAGGAGA 59.369 47.826 0.00 0.00 0.00 3.71
1894 5435 3.380637 TGCTTAGTTTAGTAGGCGAGGAG 59.619 47.826 0.00 0.00 0.00 3.69
1895 5436 3.129988 GTGCTTAGTTTAGTAGGCGAGGA 59.870 47.826 0.00 0.00 0.00 3.71
1896 5437 3.445857 GTGCTTAGTTTAGTAGGCGAGG 58.554 50.000 0.00 0.00 0.00 4.63
1897 5438 3.106672 CGTGCTTAGTTTAGTAGGCGAG 58.893 50.000 0.00 0.00 0.00 5.03
1898 5439 2.733227 GCGTGCTTAGTTTAGTAGGCGA 60.733 50.000 0.00 0.00 33.33 5.54
1899 5440 1.587034 GCGTGCTTAGTTTAGTAGGCG 59.413 52.381 0.00 0.00 33.33 5.52
1900 5441 1.587034 CGCGTGCTTAGTTTAGTAGGC 59.413 52.381 0.00 0.00 37.98 3.93
1901 5442 1.587034 GCGCGTGCTTAGTTTAGTAGG 59.413 52.381 15.02 0.00 38.39 3.18
1902 5443 2.027688 GTGCGCGTGCTTAGTTTAGTAG 59.972 50.000 23.16 0.00 43.34 2.57
1903 5444 1.987770 GTGCGCGTGCTTAGTTTAGTA 59.012 47.619 23.16 0.00 43.34 1.82
1904 5445 0.788391 GTGCGCGTGCTTAGTTTAGT 59.212 50.000 23.16 0.00 43.34 2.24
1905 5446 0.787787 TGTGCGCGTGCTTAGTTTAG 59.212 50.000 23.16 0.00 43.34 1.85
1906 5447 0.509499 GTGTGCGCGTGCTTAGTTTA 59.491 50.000 23.16 0.00 43.34 2.01
1907 5448 1.278637 GTGTGCGCGTGCTTAGTTT 59.721 52.632 23.16 0.00 43.34 2.66
1908 5449 2.935955 GTGTGCGCGTGCTTAGTT 59.064 55.556 23.16 0.00 43.34 2.24
1909 5450 2.736343 TACGTGTGCGCGTGCTTAGT 62.736 55.000 23.16 17.64 45.33 2.24
1910 5451 2.084101 TACGTGTGCGCGTGCTTAG 61.084 57.895 23.16 12.89 45.33 2.18
1911 5452 2.050259 TACGTGTGCGCGTGCTTA 60.050 55.556 23.16 8.10 45.33 3.09
1912 5453 3.698463 GTACGTGTGCGCGTGCTT 61.698 61.111 23.16 3.82 45.33 3.91
1913 5454 4.934942 TGTACGTGTGCGCGTGCT 62.935 61.111 23.16 3.42 45.27 4.40
1914 5455 3.773630 ATGTACGTGTGCGCGTGC 61.774 61.111 15.48 15.48 45.33 5.34
1915 5456 2.093799 CATGTACGTGTGCGCGTG 59.906 61.111 19.19 0.00 45.33 5.34
1917 5458 3.684809 CTGCATGTACGTGTGCGCG 62.685 63.158 16.28 0.00 44.11 6.86
1918 5459 2.096406 CTGCATGTACGTGTGCGC 59.904 61.111 16.28 0.00 44.11 6.09
1919 5460 1.416049 GTCTGCATGTACGTGTGCG 59.584 57.895 16.28 9.22 44.11 5.34
1920 5461 1.416049 CGTCTGCATGTACGTGTGC 59.584 57.895 16.28 12.80 41.61 4.57
1925 5466 0.438445 CCAACACGTCTGCATGTACG 59.562 55.000 13.01 13.01 44.47 3.67
1926 5467 1.726791 CTCCAACACGTCTGCATGTAC 59.273 52.381 0.00 0.00 0.00 2.90
1927 5468 1.616374 TCTCCAACACGTCTGCATGTA 59.384 47.619 0.00 0.00 0.00 2.29
1928 5469 0.392706 TCTCCAACACGTCTGCATGT 59.607 50.000 0.00 0.00 0.00 3.21
1929 5470 1.395954 CATCTCCAACACGTCTGCATG 59.604 52.381 0.00 0.00 0.00 4.06
1930 5471 1.276138 TCATCTCCAACACGTCTGCAT 59.724 47.619 0.00 0.00 0.00 3.96
1931 5472 0.678950 TCATCTCCAACACGTCTGCA 59.321 50.000 0.00 0.00 0.00 4.41
1932 5473 2.015736 ATCATCTCCAACACGTCTGC 57.984 50.000 0.00 0.00 0.00 4.26
1933 5474 4.936891 TCATATCATCTCCAACACGTCTG 58.063 43.478 0.00 0.00 0.00 3.51
1934 5475 5.598416 TTCATATCATCTCCAACACGTCT 57.402 39.130 0.00 0.00 0.00 4.18
1935 5476 6.662414 TTTTCATATCATCTCCAACACGTC 57.338 37.500 0.00 0.00 0.00 4.34
1936 5477 7.630242 ATTTTTCATATCATCTCCAACACGT 57.370 32.000 0.00 0.00 0.00 4.49
1937 5478 9.438291 GTTATTTTTCATATCATCTCCAACACG 57.562 33.333 0.00 0.00 0.00 4.49
1940 5481 9.956720 CCTGTTATTTTTCATATCATCTCCAAC 57.043 33.333 0.00 0.00 0.00 3.77
1941 5482 9.919416 TCCTGTTATTTTTCATATCATCTCCAA 57.081 29.630 0.00 0.00 0.00 3.53
1942 5483 9.565090 CTCCTGTTATTTTTCATATCATCTCCA 57.435 33.333 0.00 0.00 0.00 3.86
1943 5484 9.784531 TCTCCTGTTATTTTTCATATCATCTCC 57.215 33.333 0.00 0.00 0.00 3.71
1948 5489 9.904198 TGTGATCTCCTGTTATTTTTCATATCA 57.096 29.630 0.00 0.00 0.00 2.15
1951 5492 8.677300 GCTTGTGATCTCCTGTTATTTTTCATA 58.323 33.333 0.00 0.00 0.00 2.15
1952 5493 7.395489 AGCTTGTGATCTCCTGTTATTTTTCAT 59.605 33.333 0.00 0.00 0.00 2.57
1953 5494 6.716628 AGCTTGTGATCTCCTGTTATTTTTCA 59.283 34.615 0.00 0.00 0.00 2.69
1954 5495 7.094634 TGAGCTTGTGATCTCCTGTTATTTTTC 60.095 37.037 0.00 0.00 0.00 2.29
1955 5496 6.716628 TGAGCTTGTGATCTCCTGTTATTTTT 59.283 34.615 0.00 0.00 0.00 1.94
1956 5497 6.240894 TGAGCTTGTGATCTCCTGTTATTTT 58.759 36.000 0.00 0.00 0.00 1.82
1957 5498 5.809001 TGAGCTTGTGATCTCCTGTTATTT 58.191 37.500 0.00 0.00 0.00 1.40
1958 5499 5.426689 TGAGCTTGTGATCTCCTGTTATT 57.573 39.130 0.00 0.00 0.00 1.40
1959 5500 5.188555 TCTTGAGCTTGTGATCTCCTGTTAT 59.811 40.000 0.00 0.00 0.00 1.89
1960 5501 4.528206 TCTTGAGCTTGTGATCTCCTGTTA 59.472 41.667 0.00 0.00 0.00 2.41
1961 5502 3.326006 TCTTGAGCTTGTGATCTCCTGTT 59.674 43.478 0.00 0.00 0.00 3.16
1962 5503 2.902486 TCTTGAGCTTGTGATCTCCTGT 59.098 45.455 0.00 0.00 0.00 4.00
1963 5504 3.055963 ACTCTTGAGCTTGTGATCTCCTG 60.056 47.826 0.00 0.00 0.00 3.86
1964 5505 3.055963 CACTCTTGAGCTTGTGATCTCCT 60.056 47.826 0.00 0.00 32.72 3.69
1965 5506 3.056250 TCACTCTTGAGCTTGTGATCTCC 60.056 47.826 0.00 0.00 34.94 3.71
1966 5507 4.185467 TCACTCTTGAGCTTGTGATCTC 57.815 45.455 0.00 0.00 34.94 2.75
1967 5508 4.613925 TTCACTCTTGAGCTTGTGATCT 57.386 40.909 0.00 0.00 38.89 2.75
1968 5509 4.934001 TCATTCACTCTTGAGCTTGTGATC 59.066 41.667 0.00 0.00 38.89 2.92
1969 5510 4.903054 TCATTCACTCTTGAGCTTGTGAT 58.097 39.130 0.00 0.00 38.89 3.06
1970 5511 4.341366 TCATTCACTCTTGAGCTTGTGA 57.659 40.909 0.00 0.00 37.62 3.58
1971 5512 5.048921 ACATTCATTCACTCTTGAGCTTGTG 60.049 40.000 0.00 0.00 31.71 3.33
1972 5513 5.068636 ACATTCATTCACTCTTGAGCTTGT 58.931 37.500 0.00 0.00 31.71 3.16
1973 5514 5.624344 ACATTCATTCACTCTTGAGCTTG 57.376 39.130 0.00 0.00 31.71 4.01
1974 5515 5.766670 TGAACATTCATTCACTCTTGAGCTT 59.233 36.000 0.00 0.00 33.62 3.74
1975 5516 5.311265 TGAACATTCATTCACTCTTGAGCT 58.689 37.500 0.00 0.00 33.62 4.09
1976 5517 5.410746 TCTGAACATTCATTCACTCTTGAGC 59.589 40.000 0.00 0.00 36.46 4.26
1977 5518 6.400834 CGTCTGAACATTCATTCACTCTTGAG 60.401 42.308 0.00 0.00 36.46 3.02
1978 5519 5.406477 CGTCTGAACATTCATTCACTCTTGA 59.594 40.000 0.00 0.00 36.46 3.02
1979 5520 5.390251 CCGTCTGAACATTCATTCACTCTTG 60.390 44.000 0.00 0.00 36.46 3.02
1980 5521 4.692625 CCGTCTGAACATTCATTCACTCTT 59.307 41.667 0.00 0.00 36.46 2.85
1981 5522 4.021104 TCCGTCTGAACATTCATTCACTCT 60.021 41.667 0.00 0.00 36.46 3.24
1982 5523 4.092091 GTCCGTCTGAACATTCATTCACTC 59.908 45.833 0.00 0.00 36.46 3.51
1983 5524 3.997021 GTCCGTCTGAACATTCATTCACT 59.003 43.478 0.00 0.00 36.46 3.41
1984 5525 3.181530 CGTCCGTCTGAACATTCATTCAC 60.182 47.826 0.00 0.00 36.46 3.18
1985 5526 2.993220 CGTCCGTCTGAACATTCATTCA 59.007 45.455 0.00 0.00 36.46 2.57
1986 5527 2.993899 ACGTCCGTCTGAACATTCATTC 59.006 45.455 0.00 0.00 36.46 2.67
1987 5528 2.736721 CACGTCCGTCTGAACATTCATT 59.263 45.455 0.00 0.00 36.46 2.57
1988 5529 2.337583 CACGTCCGTCTGAACATTCAT 58.662 47.619 0.00 0.00 36.46 2.57
1989 5530 1.778334 CACGTCCGTCTGAACATTCA 58.222 50.000 0.00 0.00 35.57 2.57
1990 5531 0.438830 GCACGTCCGTCTGAACATTC 59.561 55.000 0.00 0.00 0.00 2.67
1991 5532 1.282248 CGCACGTCCGTCTGAACATT 61.282 55.000 0.00 0.00 0.00 2.71
1992 5533 1.733041 CGCACGTCCGTCTGAACAT 60.733 57.895 0.00 0.00 0.00 2.71
1993 5534 2.354188 CGCACGTCCGTCTGAACA 60.354 61.111 0.00 0.00 0.00 3.18
1994 5535 3.764049 GCGCACGTCCGTCTGAAC 61.764 66.667 0.30 0.00 0.00 3.18
2006 5547 4.152625 CTAGTTGCTGGCGCGCAC 62.153 66.667 34.42 21.81 40.09 5.34
2007 5548 3.874807 TTCTAGTTGCTGGCGCGCA 62.875 57.895 34.42 17.93 39.65 6.09
2008 5549 3.088500 CTTCTAGTTGCTGGCGCGC 62.089 63.158 25.94 25.94 39.65 6.86
2009 5550 2.456119 CCTTCTAGTTGCTGGCGCG 61.456 63.158 0.00 0.00 39.65 6.86
2010 5551 1.079127 TCCTTCTAGTTGCTGGCGC 60.079 57.895 0.00 0.00 0.00 6.53
2011 5552 0.037326 TGTCCTTCTAGTTGCTGGCG 60.037 55.000 0.00 0.00 0.00 5.69
2012 5553 1.731720 CTGTCCTTCTAGTTGCTGGC 58.268 55.000 0.00 0.00 0.00 4.85
2013 5554 1.277557 AGCTGTCCTTCTAGTTGCTGG 59.722 52.381 0.00 0.00 0.00 4.85
2014 5555 2.344950 CAGCTGTCCTTCTAGTTGCTG 58.655 52.381 5.25 0.00 39.98 4.41
2015 5556 1.338579 GCAGCTGTCCTTCTAGTTGCT 60.339 52.381 16.64 0.00 44.49 3.91
2016 5557 1.082690 GCAGCTGTCCTTCTAGTTGC 58.917 55.000 16.64 0.00 42.37 4.17
2017 5558 1.354040 CGCAGCTGTCCTTCTAGTTG 58.646 55.000 16.64 0.00 0.00 3.16
2018 5559 0.247736 CCGCAGCTGTCCTTCTAGTT 59.752 55.000 16.64 0.00 0.00 2.24
2019 5560 0.900647 ACCGCAGCTGTCCTTCTAGT 60.901 55.000 16.64 0.00 0.00 2.57
2020 5561 0.459237 CACCGCAGCTGTCCTTCTAG 60.459 60.000 16.64 0.00 0.00 2.43
2021 5562 1.591703 CACCGCAGCTGTCCTTCTA 59.408 57.895 16.64 0.00 0.00 2.10
2022 5563 2.345244 CACCGCAGCTGTCCTTCT 59.655 61.111 16.64 0.00 0.00 2.85
2023 5564 3.426568 GCACCGCAGCTGTCCTTC 61.427 66.667 16.64 0.00 0.00 3.46
2024 5565 3.557903 ATGCACCGCAGCTGTCCTT 62.558 57.895 16.64 0.00 43.65 3.36
2025 5566 3.965539 GATGCACCGCAGCTGTCCT 62.966 63.158 16.64 0.00 43.65 3.85
2026 5567 3.503363 GATGCACCGCAGCTGTCC 61.503 66.667 16.64 0.00 43.65 4.02
2027 5568 3.857854 CGATGCACCGCAGCTGTC 61.858 66.667 16.64 6.83 43.23 3.51
2028 5569 4.377708 TCGATGCACCGCAGCTGT 62.378 61.111 16.64 0.00 43.23 4.40
2029 5570 3.561213 CTCGATGCACCGCAGCTG 61.561 66.667 10.11 10.11 43.23 4.24
2030 5571 2.584261 AATCTCGATGCACCGCAGCT 62.584 55.000 0.00 0.00 43.23 4.24
2031 5572 2.098842 GAATCTCGATGCACCGCAGC 62.099 60.000 0.00 0.00 43.65 5.25
2032 5573 0.807275 TGAATCTCGATGCACCGCAG 60.807 55.000 0.00 0.00 43.65 5.18
2033 5574 1.083806 GTGAATCTCGATGCACCGCA 61.084 55.000 0.00 0.00 40.70 5.69
2034 5575 0.807667 AGTGAATCTCGATGCACCGC 60.808 55.000 13.19 0.00 46.37 5.68
2035 5576 2.389059 CTAGTGAATCTCGATGCACCG 58.611 52.381 13.19 0.00 46.37 4.94
2036 5577 2.131183 GCTAGTGAATCTCGATGCACC 58.869 52.381 13.19 0.00 46.37 5.01
2037 5578 1.783711 CGCTAGTGAATCTCGATGCAC 59.216 52.381 9.56 9.56 45.71 4.57
2038 5579 1.676006 TCGCTAGTGAATCTCGATGCA 59.324 47.619 2.79 0.00 0.00 3.96
2039 5580 2.407521 TCGCTAGTGAATCTCGATGC 57.592 50.000 2.79 0.00 0.00 3.91
2041 5582 4.837896 TTCATCGCTAGTGAATCTCGAT 57.162 40.909 10.59 1.67 40.04 3.59
2042 5583 4.837896 ATTCATCGCTAGTGAATCTCGA 57.162 40.909 10.59 0.00 41.19 4.04
2043 5584 5.932661 TCTATTCATCGCTAGTGAATCTCG 58.067 41.667 10.59 0.00 43.29 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.