Multiple sequence alignment - TraesCS4B01G285500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G285500 chr4B 100.000 3296 0 0 1 3296 568881077 568877782 0.000000e+00 6087.0
1 TraesCS4B01G285500 chr4B 94.617 1356 66 6 982 2331 569406561 569405207 0.000000e+00 2093.0
2 TraesCS4B01G285500 chr4B 95.439 285 11 1 1 285 493786629 493786347 1.390000e-123 453.0
3 TraesCS4B01G285500 chr4B 92.388 289 20 1 1 289 609363532 609363246 8.510000e-111 411.0
4 TraesCS4B01G285500 chr4A 94.071 1383 66 8 991 2358 12153628 12155009 0.000000e+00 2085.0
5 TraesCS4B01G285500 chr4A 94.717 1306 65 2 989 2291 11987693 11988997 0.000000e+00 2026.0
6 TraesCS4B01G285500 chr4A 92.618 1314 71 9 982 2292 11841277 11842567 0.000000e+00 1866.0
7 TraesCS4B01G285500 chr4A 86.658 802 86 10 2495 3293 12155401 12156184 0.000000e+00 869.0
8 TraesCS4B01G285500 chr4A 86.207 406 50 2 2897 3296 11846874 11847279 5.050000e-118 435.0
9 TraesCS4B01G285500 chr4A 84.358 358 43 7 2496 2851 11846317 11846663 4.070000e-89 339.0
10 TraesCS4B01G285500 chr4A 88.258 264 17 4 434 686 12153103 12153363 1.490000e-78 303.0
11 TraesCS4B01G285500 chr4A 88.608 237 6 6 757 989 12153361 12153580 5.420000e-68 268.0
12 TraesCS4B01G285500 chr4A 83.766 154 16 4 524 673 11840777 11840925 1.600000e-28 137.0
13 TraesCS4B01G285500 chr4A 100.000 29 0 0 788 816 11984904 11984932 2.000000e-03 54.7
14 TraesCS4B01G285500 chr4D 93.994 1382 72 7 989 2363 455703001 455701624 0.000000e+00 2082.0
15 TraesCS4B01G285500 chr4D 93.846 715 42 2 1588 2300 455699997 455699283 0.000000e+00 1075.0
16 TraesCS4B01G285500 chr4D 89.095 807 69 10 2495 3296 455698810 455698018 0.000000e+00 985.0
17 TraesCS4B01G285500 chr4D 88.191 398 34 3 2907 3296 455700972 455700580 2.320000e-126 462.0
18 TraesCS4B01G285500 chr4D 96.109 257 10 0 1222 1478 455700246 455699990 1.410000e-113 420.0
19 TraesCS4B01G285500 chr4D 94.040 151 8 1 287 437 51859921 51860070 9.200000e-56 228.0
20 TraesCS4B01G285500 chr4D 78.906 384 42 22 512 894 455703461 455703116 1.190000e-54 224.0
21 TraesCS4B01G285500 chr4D 87.113 194 20 5 2446 2638 455701629 455701440 7.160000e-52 215.0
22 TraesCS4B01G285500 chr1B 96.491 285 10 0 1 285 331124604 331124888 3.850000e-129 472.0
23 TraesCS4B01G285500 chr1B 94.035 285 16 1 1 285 37703747 37703464 6.530000e-117 431.0
24 TraesCS4B01G285500 chr3B 94.810 289 15 0 1 289 786520069 786519781 5.020000e-123 451.0
25 TraesCS4B01G285500 chr3B 94.386 285 16 0 1 285 636435354 636435638 3.900000e-119 438.0
26 TraesCS4B01G285500 chr7B 94.737 285 15 0 1 285 39612136 39612420 8.390000e-121 444.0
27 TraesCS4B01G285500 chr3D 85.227 440 49 10 1 437 10366551 10366125 3.900000e-119 438.0
28 TraesCS4B01G285500 chr3D 93.333 150 10 0 287 436 559910065 559910214 4.280000e-54 222.0
29 TraesCS4B01G285500 chr5B 90.361 332 25 5 1 331 419833403 419833078 2.350000e-116 429.0
30 TraesCS4B01G285500 chr7D 89.623 318 26 6 1 315 161276290 161275977 6.630000e-107 398.0
31 TraesCS4B01G285500 chr7D 94.000 150 9 0 287 436 10815103 10814954 9.200000e-56 228.0
32 TraesCS4B01G285500 chr7D 93.377 151 10 0 287 437 10825370 10825520 1.190000e-54 224.0
33 TraesCS4B01G285500 chr1D 94.667 150 8 0 287 436 42777056 42776907 1.980000e-57 233.0
34 TraesCS4B01G285500 chr1D 92.667 150 11 0 287 436 99781671 99781522 1.990000e-52 217.0
35 TraesCS4B01G285500 chr1D 90.123 162 15 1 274 435 409977419 409977579 3.330000e-50 209.0
36 TraesCS4B01G285500 chr5D 94.631 149 8 0 288 436 239948659 239948511 7.110000e-57 231.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G285500 chr4B 568877782 568881077 3295 True 6087.000000 6087 100.000000 1 3296 1 chr4B.!!$R2 3295
1 TraesCS4B01G285500 chr4B 569405207 569406561 1354 True 2093.000000 2093 94.617000 982 2331 1 chr4B.!!$R3 1349
2 TraesCS4B01G285500 chr4A 11984904 11988997 4093 False 1040.350000 2026 97.358500 788 2291 2 chr4A.!!$F2 1503
3 TraesCS4B01G285500 chr4A 12153103 12156184 3081 False 881.250000 2085 89.398750 434 3293 4 chr4A.!!$F3 2859
4 TraesCS4B01G285500 chr4A 11840777 11847279 6502 False 694.250000 1866 86.737250 524 3296 4 chr4A.!!$F1 2772
5 TraesCS4B01G285500 chr4D 455698018 455703461 5443 True 780.428571 2082 89.607714 512 3296 7 chr4D.!!$R1 2784

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
147 148 0.030705 TGGGAGAGGGGATTGAGAGG 60.031 60.0 0.00 0.00 0.00 3.69 F
303 304 0.034380 ATGTGCAATGCCTCAGAGCT 60.034 50.0 1.53 0.00 0.00 4.09 F
579 588 0.038067 TTGTCTTGCATGCATGTGCC 60.038 50.0 26.79 18.33 44.43 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2135 4791 0.957888 GCAGGGGAAGAAGACTGTGC 60.958 60.000 0.00 0.0 33.62 4.57 R
2247 4903 2.639839 AGAAGTGTAGGTGCCAGTGATT 59.360 45.455 0.00 0.0 0.00 2.57 R
2512 11218 0.743688 ATGCGATCTCGTGAAGAGCT 59.256 50.000 1.14 0.0 46.44 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.922375 ACAAAGGTTCCCCAAATCTTCA 58.078 40.909 0.00 0.00 37.32 3.02
22 23 4.294347 ACAAAGGTTCCCCAAATCTTCAA 58.706 39.130 0.00 0.00 37.32 2.69
23 24 4.719273 ACAAAGGTTCCCCAAATCTTCAAA 59.281 37.500 0.00 0.00 37.32 2.69
24 25 5.190726 ACAAAGGTTCCCCAAATCTTCAAAA 59.809 36.000 0.00 0.00 37.32 2.44
25 26 6.126507 ACAAAGGTTCCCCAAATCTTCAAAAT 60.127 34.615 0.00 0.00 37.32 1.82
26 27 7.071824 ACAAAGGTTCCCCAAATCTTCAAAATA 59.928 33.333 0.00 0.00 37.32 1.40
27 28 6.857437 AGGTTCCCCAAATCTTCAAAATAG 57.143 37.500 0.00 0.00 0.00 1.73
28 29 6.322931 AGGTTCCCCAAATCTTCAAAATAGT 58.677 36.000 0.00 0.00 0.00 2.12
29 30 7.475299 AGGTTCCCCAAATCTTCAAAATAGTA 58.525 34.615 0.00 0.00 0.00 1.82
30 31 8.122481 AGGTTCCCCAAATCTTCAAAATAGTAT 58.878 33.333 0.00 0.00 0.00 2.12
31 32 9.416284 GGTTCCCCAAATCTTCAAAATAGTATA 57.584 33.333 0.00 0.00 0.00 1.47
55 56 4.982241 TTCTATGGATAGAAAGCAGGGG 57.018 45.455 6.63 0.00 44.07 4.79
56 57 4.213531 TCTATGGATAGAAAGCAGGGGA 57.786 45.455 0.00 0.00 36.51 4.81
57 58 4.767908 TCTATGGATAGAAAGCAGGGGAT 58.232 43.478 0.00 0.00 36.51 3.85
58 59 4.780021 TCTATGGATAGAAAGCAGGGGATC 59.220 45.833 0.00 0.00 36.51 3.36
59 60 1.694150 TGGATAGAAAGCAGGGGATCG 59.306 52.381 0.00 0.00 0.00 3.69
60 61 1.002544 GGATAGAAAGCAGGGGATCGG 59.997 57.143 0.00 0.00 0.00 4.18
61 62 1.971357 GATAGAAAGCAGGGGATCGGA 59.029 52.381 0.00 0.00 0.00 4.55
62 63 1.414158 TAGAAAGCAGGGGATCGGAG 58.586 55.000 0.00 0.00 0.00 4.63
63 64 1.147153 GAAAGCAGGGGATCGGAGG 59.853 63.158 0.00 0.00 0.00 4.30
64 65 1.306997 AAAGCAGGGGATCGGAGGA 60.307 57.895 0.00 0.00 0.00 3.71
65 66 1.341156 AAAGCAGGGGATCGGAGGAG 61.341 60.000 0.00 0.00 0.00 3.69
66 67 2.123251 GCAGGGGATCGGAGGAGA 60.123 66.667 0.00 0.00 0.00 3.71
67 68 2.206536 GCAGGGGATCGGAGGAGAG 61.207 68.421 0.00 0.00 0.00 3.20
68 69 1.231641 CAGGGGATCGGAGGAGAGT 59.768 63.158 0.00 0.00 0.00 3.24
69 70 0.478942 CAGGGGATCGGAGGAGAGTA 59.521 60.000 0.00 0.00 0.00 2.59
70 71 0.479378 AGGGGATCGGAGGAGAGTAC 59.521 60.000 0.00 0.00 0.00 2.73
71 72 0.540133 GGGGATCGGAGGAGAGTACC 60.540 65.000 0.00 0.00 0.00 3.34
72 73 0.479378 GGGATCGGAGGAGAGTACCT 59.521 60.000 0.00 0.00 43.64 3.08
73 74 1.133419 GGGATCGGAGGAGAGTACCTT 60.133 57.143 0.00 0.00 40.73 3.50
74 75 2.232399 GGATCGGAGGAGAGTACCTTC 58.768 57.143 0.00 0.00 40.73 3.46
75 76 2.158579 GGATCGGAGGAGAGTACCTTCT 60.159 54.545 0.00 0.00 40.73 2.85
76 77 3.072768 GGATCGGAGGAGAGTACCTTCTA 59.927 52.174 0.00 0.00 40.73 2.10
77 78 3.842007 TCGGAGGAGAGTACCTTCTAG 57.158 52.381 0.00 0.00 40.73 2.43
78 79 2.438763 TCGGAGGAGAGTACCTTCTAGG 59.561 54.545 0.00 0.00 40.73 3.02
79 80 2.438763 CGGAGGAGAGTACCTTCTAGGA 59.561 54.545 0.00 0.00 40.73 2.94
80 81 3.073356 CGGAGGAGAGTACCTTCTAGGAT 59.927 52.174 0.00 0.00 40.73 3.24
81 82 4.403734 GGAGGAGAGTACCTTCTAGGATG 58.596 52.174 0.00 0.00 40.73 3.51
82 83 4.403734 GAGGAGAGTACCTTCTAGGATGG 58.596 52.174 0.00 0.00 40.73 3.51
83 84 4.055820 AGGAGAGTACCTTCTAGGATGGA 58.944 47.826 0.00 0.00 37.67 3.41
84 85 4.482772 AGGAGAGTACCTTCTAGGATGGAA 59.517 45.833 0.00 0.00 37.67 3.53
85 86 5.137082 AGGAGAGTACCTTCTAGGATGGAAT 59.863 44.000 0.00 0.00 37.67 3.01
86 87 5.245075 GGAGAGTACCTTCTAGGATGGAATG 59.755 48.000 0.00 0.00 37.67 2.67
87 88 5.151454 AGAGTACCTTCTAGGATGGAATGG 58.849 45.833 0.00 0.00 37.67 3.16
88 89 4.897051 AGTACCTTCTAGGATGGAATGGT 58.103 43.478 0.00 0.00 39.23 3.55
89 90 4.656112 AGTACCTTCTAGGATGGAATGGTG 59.344 45.833 0.00 0.00 37.54 4.17
90 91 3.736094 ACCTTCTAGGATGGAATGGTGA 58.264 45.455 0.00 0.00 37.67 4.02
91 92 3.456277 ACCTTCTAGGATGGAATGGTGAC 59.544 47.826 0.00 0.00 37.67 3.67
92 93 3.493350 CCTTCTAGGATGGAATGGTGACG 60.493 52.174 0.00 0.00 37.67 4.35
93 94 3.026707 TCTAGGATGGAATGGTGACGA 57.973 47.619 0.00 0.00 0.00 4.20
94 95 3.371034 TCTAGGATGGAATGGTGACGAA 58.629 45.455 0.00 0.00 0.00 3.85
95 96 3.772572 TCTAGGATGGAATGGTGACGAAA 59.227 43.478 0.00 0.00 0.00 3.46
96 97 3.652057 AGGATGGAATGGTGACGAAAT 57.348 42.857 0.00 0.00 0.00 2.17
97 98 3.968265 AGGATGGAATGGTGACGAAATT 58.032 40.909 0.00 0.00 0.00 1.82
98 99 3.947834 AGGATGGAATGGTGACGAAATTC 59.052 43.478 0.00 0.00 0.00 2.17
99 100 3.694072 GGATGGAATGGTGACGAAATTCA 59.306 43.478 0.00 0.00 32.96 2.57
100 101 4.438744 GGATGGAATGGTGACGAAATTCAC 60.439 45.833 0.00 0.00 44.53 3.18
101 102 2.482336 TGGAATGGTGACGAAATTCACG 59.518 45.455 0.00 3.96 45.95 4.35
102 103 2.159572 GGAATGGTGACGAAATTCACGG 60.160 50.000 9.20 0.00 45.95 4.94
103 104 2.465860 ATGGTGACGAAATTCACGGA 57.534 45.000 9.20 0.00 45.95 4.69
104 105 1.504359 TGGTGACGAAATTCACGGAC 58.496 50.000 9.20 5.77 45.95 4.79
105 106 0.794473 GGTGACGAAATTCACGGACC 59.206 55.000 9.20 9.83 45.95 4.46
106 107 1.504359 GTGACGAAATTCACGGACCA 58.496 50.000 9.20 2.92 36.79 4.02
107 108 1.868498 GTGACGAAATTCACGGACCAA 59.132 47.619 9.20 0.00 36.79 3.67
108 109 2.288458 GTGACGAAATTCACGGACCAAA 59.712 45.455 9.20 0.00 36.79 3.28
109 110 3.058501 GTGACGAAATTCACGGACCAAAT 60.059 43.478 9.20 0.00 36.79 2.32
110 111 3.187637 TGACGAAATTCACGGACCAAATC 59.812 43.478 9.20 0.00 34.93 2.17
111 112 2.158841 ACGAAATTCACGGACCAAATCG 59.841 45.455 9.20 0.00 34.93 3.34
112 113 2.158841 CGAAATTCACGGACCAAATCGT 59.841 45.455 0.00 0.00 40.49 3.73
113 114 3.723835 CGAAATTCACGGACCAAATCGTC 60.724 47.826 0.00 0.00 37.53 4.20
114 115 1.355971 ATTCACGGACCAAATCGTCG 58.644 50.000 0.00 0.00 37.53 5.12
115 116 0.668096 TTCACGGACCAAATCGTCGG 60.668 55.000 0.00 0.00 37.53 4.79
116 117 1.080366 CACGGACCAAATCGTCGGA 60.080 57.895 3.66 0.00 37.53 4.55
117 118 0.459585 CACGGACCAAATCGTCGGAT 60.460 55.000 3.66 0.00 37.53 4.18
118 119 0.248289 ACGGACCAAATCGTCGGATT 59.752 50.000 3.66 0.00 44.69 3.01
129 130 4.882671 ATCGTCGGATTTGAAGGATTTG 57.117 40.909 0.00 0.00 0.00 2.32
130 131 3.006940 TCGTCGGATTTGAAGGATTTGG 58.993 45.455 0.00 0.00 0.00 3.28
131 132 2.097466 CGTCGGATTTGAAGGATTTGGG 59.903 50.000 0.00 0.00 0.00 4.12
132 133 3.352648 GTCGGATTTGAAGGATTTGGGA 58.647 45.455 0.00 0.00 0.00 4.37
133 134 3.378427 GTCGGATTTGAAGGATTTGGGAG 59.622 47.826 0.00 0.00 0.00 4.30
134 135 3.265737 TCGGATTTGAAGGATTTGGGAGA 59.734 43.478 0.00 0.00 0.00 3.71
135 136 3.629398 CGGATTTGAAGGATTTGGGAGAG 59.371 47.826 0.00 0.00 0.00 3.20
136 137 3.956848 GGATTTGAAGGATTTGGGAGAGG 59.043 47.826 0.00 0.00 0.00 3.69
137 138 3.456380 TTTGAAGGATTTGGGAGAGGG 57.544 47.619 0.00 0.00 0.00 4.30
138 139 1.298953 TGAAGGATTTGGGAGAGGGG 58.701 55.000 0.00 0.00 0.00 4.79
139 140 1.203557 TGAAGGATTTGGGAGAGGGGA 60.204 52.381 0.00 0.00 0.00 4.81
140 141 2.139382 GAAGGATTTGGGAGAGGGGAT 58.861 52.381 0.00 0.00 0.00 3.85
141 142 2.310413 AGGATTTGGGAGAGGGGATT 57.690 50.000 0.00 0.00 0.00 3.01
142 143 1.855599 AGGATTTGGGAGAGGGGATTG 59.144 52.381 0.00 0.00 0.00 2.67
143 144 1.852965 GGATTTGGGAGAGGGGATTGA 59.147 52.381 0.00 0.00 0.00 2.57
144 145 2.158549 GGATTTGGGAGAGGGGATTGAG 60.159 54.545 0.00 0.00 0.00 3.02
145 146 2.359376 TTTGGGAGAGGGGATTGAGA 57.641 50.000 0.00 0.00 0.00 3.27
146 147 1.885049 TTGGGAGAGGGGATTGAGAG 58.115 55.000 0.00 0.00 0.00 3.20
147 148 0.030705 TGGGAGAGGGGATTGAGAGG 60.031 60.000 0.00 0.00 0.00 3.69
148 149 0.766288 GGGAGAGGGGATTGAGAGGG 60.766 65.000 0.00 0.00 0.00 4.30
149 150 0.766288 GGAGAGGGGATTGAGAGGGG 60.766 65.000 0.00 0.00 0.00 4.79
150 151 0.766288 GAGAGGGGATTGAGAGGGGG 60.766 65.000 0.00 0.00 0.00 5.40
151 152 1.238896 AGAGGGGATTGAGAGGGGGA 61.239 60.000 0.00 0.00 0.00 4.81
152 153 0.766288 GAGGGGATTGAGAGGGGGAG 60.766 65.000 0.00 0.00 0.00 4.30
153 154 1.004891 GGGGATTGAGAGGGGGAGT 59.995 63.158 0.00 0.00 0.00 3.85
154 155 1.348775 GGGGATTGAGAGGGGGAGTG 61.349 65.000 0.00 0.00 0.00 3.51
155 156 1.348775 GGGATTGAGAGGGGGAGTGG 61.349 65.000 0.00 0.00 0.00 4.00
156 157 0.326618 GGATTGAGAGGGGGAGTGGA 60.327 60.000 0.00 0.00 0.00 4.02
157 158 1.697291 GGATTGAGAGGGGGAGTGGAT 60.697 57.143 0.00 0.00 0.00 3.41
158 159 2.427889 GGATTGAGAGGGGGAGTGGATA 60.428 54.545 0.00 0.00 0.00 2.59
159 160 2.478872 TTGAGAGGGGGAGTGGATAG 57.521 55.000 0.00 0.00 0.00 2.08
160 161 0.563173 TGAGAGGGGGAGTGGATAGG 59.437 60.000 0.00 0.00 0.00 2.57
161 162 0.178918 GAGAGGGGGAGTGGATAGGG 60.179 65.000 0.00 0.00 0.00 3.53
162 163 1.843832 GAGGGGGAGTGGATAGGGC 60.844 68.421 0.00 0.00 0.00 5.19
163 164 2.854523 GGGGGAGTGGATAGGGCC 60.855 72.222 0.00 0.00 0.00 5.80
164 165 3.242291 GGGGAGTGGATAGGGCCG 61.242 72.222 0.00 0.00 0.00 6.13
165 166 3.942439 GGGAGTGGATAGGGCCGC 61.942 72.222 0.00 0.00 38.73 6.53
166 167 3.942439 GGAGTGGATAGGGCCGCC 61.942 72.222 0.00 0.00 39.26 6.13
167 168 4.301027 GAGTGGATAGGGCCGCCG 62.301 72.222 2.55 0.00 39.26 6.46
182 183 4.759096 CCGCCGCGGCTTCTTTTG 62.759 66.667 43.60 27.59 41.17 2.44
183 184 4.025401 CGCCGCGGCTTCTTTTGT 62.025 61.111 43.60 0.00 39.32 2.83
184 185 2.335011 GCCGCGGCTTCTTTTGTT 59.665 55.556 41.71 0.00 38.26 2.83
185 186 1.729484 GCCGCGGCTTCTTTTGTTC 60.729 57.895 41.71 9.25 38.26 3.18
186 187 1.949257 CCGCGGCTTCTTTTGTTCT 59.051 52.632 14.67 0.00 0.00 3.01
187 188 0.310854 CCGCGGCTTCTTTTGTTCTT 59.689 50.000 14.67 0.00 0.00 2.52
188 189 1.663161 CCGCGGCTTCTTTTGTTCTTC 60.663 52.381 14.67 0.00 0.00 2.87
189 190 1.264288 CGCGGCTTCTTTTGTTCTTCT 59.736 47.619 0.00 0.00 0.00 2.85
190 191 2.654987 GCGGCTTCTTTTGTTCTTCTG 58.345 47.619 0.00 0.00 0.00 3.02
191 192 2.033424 GCGGCTTCTTTTGTTCTTCTGT 59.967 45.455 0.00 0.00 0.00 3.41
192 193 3.250040 GCGGCTTCTTTTGTTCTTCTGTA 59.750 43.478 0.00 0.00 0.00 2.74
193 194 4.261031 GCGGCTTCTTTTGTTCTTCTGTAA 60.261 41.667 0.00 0.00 0.00 2.41
194 195 5.205565 CGGCTTCTTTTGTTCTTCTGTAAC 58.794 41.667 0.00 0.00 0.00 2.50
195 196 5.007724 CGGCTTCTTTTGTTCTTCTGTAACT 59.992 40.000 0.00 0.00 0.00 2.24
196 197 6.202226 GGCTTCTTTTGTTCTTCTGTAACTG 58.798 40.000 0.00 0.00 0.00 3.16
197 198 5.683302 GCTTCTTTTGTTCTTCTGTAACTGC 59.317 40.000 0.00 0.00 0.00 4.40
198 199 6.458888 GCTTCTTTTGTTCTTCTGTAACTGCT 60.459 38.462 0.00 0.00 0.00 4.24
199 200 6.363577 TCTTTTGTTCTTCTGTAACTGCTG 57.636 37.500 0.00 0.00 0.00 4.41
200 201 4.552166 TTTGTTCTTCTGTAACTGCTGC 57.448 40.909 0.00 0.00 0.00 5.25
201 202 3.192541 TGTTCTTCTGTAACTGCTGCA 57.807 42.857 0.88 0.88 0.00 4.41
202 203 3.540617 TGTTCTTCTGTAACTGCTGCAA 58.459 40.909 3.02 0.00 0.00 4.08
203 204 4.136796 TGTTCTTCTGTAACTGCTGCAAT 58.863 39.130 3.02 0.00 0.00 3.56
204 205 4.023792 TGTTCTTCTGTAACTGCTGCAATG 60.024 41.667 3.02 0.00 0.00 2.82
205 206 3.076621 TCTTCTGTAACTGCTGCAATGG 58.923 45.455 3.02 0.00 0.00 3.16
206 207 1.825090 TCTGTAACTGCTGCAATGGG 58.175 50.000 3.02 0.00 0.00 4.00
207 208 0.813184 CTGTAACTGCTGCAATGGGG 59.187 55.000 3.02 0.00 0.00 4.96
208 209 0.112218 TGTAACTGCTGCAATGGGGT 59.888 50.000 3.02 0.00 0.00 4.95
209 210 0.527565 GTAACTGCTGCAATGGGGTG 59.472 55.000 3.02 0.00 0.00 4.61
210 211 0.611618 TAACTGCTGCAATGGGGTGG 60.612 55.000 3.02 0.00 0.00 4.61
211 212 3.072468 CTGCTGCAATGGGGTGGG 61.072 66.667 3.02 0.00 0.00 4.61
212 213 3.892104 CTGCTGCAATGGGGTGGGT 62.892 63.158 3.02 0.00 0.00 4.51
213 214 3.384532 GCTGCAATGGGGTGGGTG 61.385 66.667 0.00 0.00 0.00 4.61
214 215 2.681064 CTGCAATGGGGTGGGTGG 60.681 66.667 0.00 0.00 0.00 4.61
215 216 4.313707 TGCAATGGGGTGGGTGGG 62.314 66.667 0.00 0.00 0.00 4.61
217 218 4.397010 CAATGGGGTGGGTGGGGG 62.397 72.222 0.00 0.00 0.00 5.40
218 219 4.645252 AATGGGGTGGGTGGGGGA 62.645 66.667 0.00 0.00 0.00 4.81
223 224 4.348495 GGTGGGTGGGGGAGGAGA 62.348 72.222 0.00 0.00 0.00 3.71
224 225 2.689034 GTGGGTGGGGGAGGAGAG 60.689 72.222 0.00 0.00 0.00 3.20
225 226 4.024984 TGGGTGGGGGAGGAGAGG 62.025 72.222 0.00 0.00 0.00 3.69
226 227 4.825679 GGGTGGGGGAGGAGAGGG 62.826 77.778 0.00 0.00 0.00 4.30
245 246 4.585526 CGCCGCGGCTGGATCTAA 62.586 66.667 43.60 0.00 39.32 2.10
246 247 2.967615 GCCGCGGCTGGATCTAAC 60.968 66.667 41.71 9.84 38.26 2.34
247 248 2.815308 CCGCGGCTGGATCTAACT 59.185 61.111 14.67 0.00 0.00 2.24
248 249 1.300233 CCGCGGCTGGATCTAACTC 60.300 63.158 14.67 0.00 0.00 3.01
249 250 1.437573 CGCGGCTGGATCTAACTCA 59.562 57.895 0.00 0.00 0.00 3.41
250 251 0.872021 CGCGGCTGGATCTAACTCAC 60.872 60.000 0.00 0.00 0.00 3.51
251 252 0.175760 GCGGCTGGATCTAACTCACA 59.824 55.000 0.00 0.00 0.00 3.58
252 253 1.405526 GCGGCTGGATCTAACTCACAA 60.406 52.381 0.00 0.00 0.00 3.33
253 254 2.743183 GCGGCTGGATCTAACTCACAAT 60.743 50.000 0.00 0.00 0.00 2.71
254 255 2.868583 CGGCTGGATCTAACTCACAATG 59.131 50.000 0.00 0.00 0.00 2.82
255 256 2.615912 GGCTGGATCTAACTCACAATGC 59.384 50.000 0.00 0.00 0.00 3.56
256 257 3.273434 GCTGGATCTAACTCACAATGCA 58.727 45.455 0.00 0.00 0.00 3.96
257 258 3.311871 GCTGGATCTAACTCACAATGCAG 59.688 47.826 0.00 0.00 39.66 4.41
258 259 3.273434 TGGATCTAACTCACAATGCAGC 58.727 45.455 0.00 0.00 0.00 5.25
259 260 3.054875 TGGATCTAACTCACAATGCAGCT 60.055 43.478 0.00 0.00 0.00 4.24
260 261 3.559242 GGATCTAACTCACAATGCAGCTC 59.441 47.826 0.00 0.00 0.00 4.09
261 262 2.977914 TCTAACTCACAATGCAGCTCC 58.022 47.619 0.00 0.00 0.00 4.70
262 263 2.012673 CTAACTCACAATGCAGCTCCC 58.987 52.381 0.00 0.00 0.00 4.30
263 264 0.957395 AACTCACAATGCAGCTCCCG 60.957 55.000 0.00 0.00 0.00 5.14
264 265 1.078918 CTCACAATGCAGCTCCCGA 60.079 57.895 0.00 0.00 0.00 5.14
265 266 1.364626 CTCACAATGCAGCTCCCGAC 61.365 60.000 0.00 0.00 0.00 4.79
266 267 2.434884 ACAATGCAGCTCCCGACG 60.435 61.111 0.00 0.00 0.00 5.12
267 268 3.197790 CAATGCAGCTCCCGACGG 61.198 66.667 6.99 6.99 0.00 4.79
271 272 4.577246 GCAGCTCCCGACGGCTAG 62.577 72.222 8.86 9.24 37.00 3.42
272 273 3.905678 CAGCTCCCGACGGCTAGG 61.906 72.222 8.86 0.00 37.00 3.02
283 284 2.825836 GGCTAGGCGCTGCACATT 60.826 61.111 7.64 0.00 39.13 2.71
284 285 1.523711 GGCTAGGCGCTGCACATTA 60.524 57.895 7.64 0.00 39.13 1.90
285 286 0.886490 GGCTAGGCGCTGCACATTAT 60.886 55.000 7.64 0.00 39.13 1.28
286 287 0.236711 GCTAGGCGCTGCACATTATG 59.763 55.000 7.64 0.00 35.14 1.90
287 288 1.586422 CTAGGCGCTGCACATTATGT 58.414 50.000 7.64 0.00 0.00 2.29
288 289 4.498537 GCTAGGCGCTGCACATTATGTG 62.499 54.545 19.89 19.89 42.61 3.21
298 299 3.786516 CACATTATGTGCAATGCCTCA 57.213 42.857 12.62 2.48 41.89 3.86
299 300 3.702330 CACATTATGTGCAATGCCTCAG 58.298 45.455 12.62 0.00 41.89 3.35
300 301 3.379057 CACATTATGTGCAATGCCTCAGA 59.621 43.478 12.62 0.00 41.89 3.27
301 302 3.630769 ACATTATGTGCAATGCCTCAGAG 59.369 43.478 1.53 0.00 39.13 3.35
302 303 1.671979 TATGTGCAATGCCTCAGAGC 58.328 50.000 1.53 0.00 0.00 4.09
303 304 0.034380 ATGTGCAATGCCTCAGAGCT 60.034 50.000 1.53 0.00 0.00 4.09
304 305 0.614812 TGTGCAATGCCTCAGAGCTA 59.385 50.000 1.53 0.00 0.00 3.32
305 306 1.297664 GTGCAATGCCTCAGAGCTAG 58.702 55.000 1.53 0.00 0.00 3.42
306 307 0.179702 TGCAATGCCTCAGAGCTAGG 59.820 55.000 1.53 0.00 37.17 3.02
318 319 4.508128 GCTAGGCGCTGCACCGTA 62.508 66.667 7.64 0.00 35.14 4.02
319 320 2.278857 CTAGGCGCTGCACCGTAG 60.279 66.667 7.64 2.34 0.00 3.51
352 353 4.627801 TGGCGGGCGCTACACAAA 62.628 61.111 7.64 0.00 41.60 2.83
353 354 3.358707 GGCGGGCGCTACACAAAA 61.359 61.111 7.64 0.00 41.60 2.44
354 355 2.175811 GCGGGCGCTACACAAAAG 59.824 61.111 7.64 0.00 38.26 2.27
355 356 2.867472 CGGGCGCTACACAAAAGG 59.133 61.111 7.64 0.00 0.00 3.11
356 357 2.686816 CGGGCGCTACACAAAAGGG 61.687 63.158 7.64 0.00 0.00 3.95
357 358 1.602605 GGGCGCTACACAAAAGGGT 60.603 57.895 7.64 0.00 0.00 4.34
358 359 1.583495 GGGCGCTACACAAAAGGGTC 61.583 60.000 7.64 0.00 0.00 4.46
359 360 0.887387 GGCGCTACACAAAAGGGTCA 60.887 55.000 7.64 0.00 32.25 4.02
360 361 0.517316 GCGCTACACAAAAGGGTCAG 59.483 55.000 0.00 0.00 0.00 3.51
361 362 1.156736 CGCTACACAAAAGGGTCAGG 58.843 55.000 0.00 0.00 0.00 3.86
362 363 1.270625 CGCTACACAAAAGGGTCAGGA 60.271 52.381 0.00 0.00 0.00 3.86
363 364 2.615493 CGCTACACAAAAGGGTCAGGAT 60.615 50.000 0.00 0.00 0.00 3.24
364 365 3.369052 CGCTACACAAAAGGGTCAGGATA 60.369 47.826 0.00 0.00 0.00 2.59
365 366 4.192317 GCTACACAAAAGGGTCAGGATAG 58.808 47.826 0.00 0.00 0.00 2.08
366 367 4.323562 GCTACACAAAAGGGTCAGGATAGT 60.324 45.833 0.00 0.00 0.00 2.12
367 368 4.021102 ACACAAAAGGGTCAGGATAGTG 57.979 45.455 0.00 0.00 0.00 2.74
368 369 3.650942 ACACAAAAGGGTCAGGATAGTGA 59.349 43.478 0.00 0.00 0.00 3.41
369 370 4.104102 ACACAAAAGGGTCAGGATAGTGAA 59.896 41.667 0.00 0.00 0.00 3.18
370 371 5.070001 CACAAAAGGGTCAGGATAGTGAAA 58.930 41.667 0.00 0.00 0.00 2.69
371 372 5.711976 CACAAAAGGGTCAGGATAGTGAAAT 59.288 40.000 0.00 0.00 0.00 2.17
372 373 6.884295 CACAAAAGGGTCAGGATAGTGAAATA 59.116 38.462 0.00 0.00 0.00 1.40
373 374 7.066284 CACAAAAGGGTCAGGATAGTGAAATAG 59.934 40.741 0.00 0.00 0.00 1.73
374 375 6.893020 AAAGGGTCAGGATAGTGAAATAGT 57.107 37.500 0.00 0.00 0.00 2.12
375 376 6.893020 AAGGGTCAGGATAGTGAAATAGTT 57.107 37.500 0.00 0.00 0.00 2.24
376 377 6.893020 AGGGTCAGGATAGTGAAATAGTTT 57.107 37.500 0.00 0.00 0.00 2.66
377 378 6.890293 AGGGTCAGGATAGTGAAATAGTTTC 58.110 40.000 0.00 0.00 40.08 2.78
378 379 6.443849 AGGGTCAGGATAGTGAAATAGTTTCA 59.556 38.462 1.24 1.24 46.68 2.69
389 390 6.968263 TGAAATAGTTTCACACCCATTTCA 57.032 33.333 1.24 0.00 44.21 2.69
390 391 7.537596 TGAAATAGTTTCACACCCATTTCAT 57.462 32.000 1.24 0.00 44.21 2.57
391 392 7.961351 TGAAATAGTTTCACACCCATTTCATT 58.039 30.769 1.24 0.00 44.21 2.57
392 393 8.087750 TGAAATAGTTTCACACCCATTTCATTC 58.912 33.333 1.24 0.00 44.21 2.67
393 394 7.781324 AATAGTTTCACACCCATTTCATTCT 57.219 32.000 0.00 0.00 0.00 2.40
394 395 5.458041 AGTTTCACACCCATTTCATTCTG 57.542 39.130 0.00 0.00 0.00 3.02
395 396 4.895297 AGTTTCACACCCATTTCATTCTGT 59.105 37.500 0.00 0.00 0.00 3.41
396 397 4.852134 TTCACACCCATTTCATTCTGTG 57.148 40.909 0.00 0.00 0.00 3.66
397 398 4.097551 TCACACCCATTTCATTCTGTGA 57.902 40.909 0.00 0.00 36.53 3.58
398 399 4.468713 TCACACCCATTTCATTCTGTGAA 58.531 39.130 0.00 0.00 44.87 3.18
399 400 5.078949 TCACACCCATTTCATTCTGTGAAT 58.921 37.500 0.00 0.00 45.77 2.57
400 401 5.539574 TCACACCCATTTCATTCTGTGAATT 59.460 36.000 0.00 0.00 45.77 2.17
401 402 5.636121 CACACCCATTTCATTCTGTGAATTG 59.364 40.000 0.00 5.96 45.77 2.32
402 403 5.539574 ACACCCATTTCATTCTGTGAATTGA 59.460 36.000 11.91 0.00 45.77 2.57
403 404 6.211986 ACACCCATTTCATTCTGTGAATTGAT 59.788 34.615 11.91 1.35 45.77 2.57
404 405 7.101054 CACCCATTTCATTCTGTGAATTGATT 58.899 34.615 11.91 0.15 45.77 2.57
405 406 7.604927 CACCCATTTCATTCTGTGAATTGATTT 59.395 33.333 11.91 0.00 45.77 2.17
406 407 7.820872 ACCCATTTCATTCTGTGAATTGATTTC 59.179 33.333 11.91 0.00 45.77 2.17
407 408 7.009815 CCCATTTCATTCTGTGAATTGATTTCG 59.990 37.037 11.91 0.00 45.77 3.46
408 409 7.543172 CCATTTCATTCTGTGAATTGATTTCGT 59.457 33.333 11.91 0.00 45.77 3.85
409 410 8.581263 CATTTCATTCTGTGAATTGATTTCGTC 58.419 33.333 6.77 0.00 45.77 4.20
410 411 6.182039 TCATTCTGTGAATTGATTTCGTCC 57.818 37.500 0.00 0.00 37.13 4.79
411 412 4.661993 TTCTGTGAATTGATTTCGTCCG 57.338 40.909 0.00 0.00 37.13 4.79
412 413 3.000041 TCTGTGAATTGATTTCGTCCGG 59.000 45.455 0.00 0.00 37.13 5.14
413 414 3.000041 CTGTGAATTGATTTCGTCCGGA 59.000 45.455 0.00 0.00 37.13 5.14
414 415 3.000041 TGTGAATTGATTTCGTCCGGAG 59.000 45.455 3.06 0.00 37.13 4.63
415 416 2.351726 GTGAATTGATTTCGTCCGGAGG 59.648 50.000 18.14 18.14 43.56 4.30
416 417 2.027561 TGAATTGATTTCGTCCGGAGGT 60.028 45.455 22.72 4.70 42.98 3.85
417 418 3.558321 TGAATTGATTTCGTCCGGAGGTT 60.558 43.478 22.72 8.67 42.98 3.50
418 419 4.322877 TGAATTGATTTCGTCCGGAGGTTA 60.323 41.667 22.72 12.73 42.98 2.85
419 420 5.800560 TGAATTGATTTCGTCCGGAGGTTAA 60.801 40.000 22.72 17.63 42.98 2.01
420 421 7.241738 TGAATTGATTTCGTCCGGAGGTTAAA 61.242 38.462 22.72 16.81 42.98 1.52
421 422 8.650441 TGAATTGATTTCGTCCGGAGGTTAAAA 61.650 37.037 22.72 16.16 42.98 1.52
433 434 7.116061 CCGGAGGTTAAAATTGTCAAATTTG 57.884 36.000 12.15 12.15 43.29 2.32
434 435 6.347321 CCGGAGGTTAAAATTGTCAAATTTGC 60.347 38.462 13.54 9.16 43.29 3.68
435 436 6.347321 CGGAGGTTAAAATTGTCAAATTTGCC 60.347 38.462 13.54 2.32 43.63 4.52
448 449 6.479660 TGTCAAATTTGCCAAGACAGATTTTC 59.520 34.615 13.54 0.00 33.46 2.29
476 477 2.617021 CGTGGGCTAAAGGTACAACCAT 60.617 50.000 0.00 0.00 41.95 3.55
481 482 4.398358 GGGCTAAAGGTACAACCATCTTTC 59.602 45.833 0.00 0.00 41.95 2.62
496 497 5.163152 ACCATCTTTCTAGGGATCCAATCAC 60.163 44.000 15.23 0.00 0.00 3.06
510 511 3.634448 TCCAATCACAAATTGGTCACGTT 59.366 39.130 14.65 0.00 46.47 3.99
556 557 3.775261 TTGTGGGTACAAGGAGTTACC 57.225 47.619 0.00 0.00 41.66 2.85
565 574 1.346722 CAAGGAGTTACCCGGTTGTCT 59.653 52.381 0.00 0.00 40.05 3.41
572 581 0.958382 TACCCGGTTGTCTTGCATGC 60.958 55.000 11.82 11.82 0.00 4.06
573 582 2.267351 CCCGGTTGTCTTGCATGCA 61.267 57.895 18.46 18.46 0.00 3.96
574 583 1.597797 CCCGGTTGTCTTGCATGCAT 61.598 55.000 23.37 0.00 0.00 3.96
575 584 0.457166 CCGGTTGTCTTGCATGCATG 60.457 55.000 23.37 23.63 0.00 4.06
579 588 0.038067 TTGTCTTGCATGCATGTGCC 60.038 50.000 26.79 18.33 44.43 5.01
581 590 0.457853 GTCTTGCATGCATGTGCCTG 60.458 55.000 26.79 13.21 44.43 4.85
611 623 1.006086 TATCACGAACATGCAAGCGG 58.994 50.000 0.00 0.00 0.00 5.52
613 625 2.669569 ACGAACATGCAAGCGGCT 60.670 55.556 0.00 0.00 45.15 5.52
633 645 4.458397 GCTGCCCACATGCATATATATCT 58.542 43.478 0.00 0.00 41.16 1.98
689 710 1.009389 GCGACGAGGGTGAAGTTGAG 61.009 60.000 0.00 0.00 0.00 3.02
724 755 2.154139 TGGCTTCCACCACACAGAT 58.846 52.632 0.00 0.00 33.75 2.90
726 757 1.278985 TGGCTTCCACCACACAGATAG 59.721 52.381 0.00 0.00 33.75 2.08
727 758 1.279271 GGCTTCCACCACACAGATAGT 59.721 52.381 0.00 0.00 0.00 2.12
728 759 2.500098 GGCTTCCACCACACAGATAGTA 59.500 50.000 0.00 0.00 0.00 1.82
729 760 3.522553 GCTTCCACCACACAGATAGTAC 58.477 50.000 0.00 0.00 0.00 2.73
732 763 3.362706 TCCACCACACAGATAGTACTCC 58.637 50.000 0.00 0.00 0.00 3.85
735 766 4.142138 CCACCACACAGATAGTACTCCTTC 60.142 50.000 0.00 0.00 0.00 3.46
736 767 4.462834 CACCACACAGATAGTACTCCTTCA 59.537 45.833 0.00 0.00 0.00 3.02
737 768 5.127845 CACCACACAGATAGTACTCCTTCAT 59.872 44.000 0.00 0.00 0.00 2.57
738 769 5.721960 ACCACACAGATAGTACTCCTTCATT 59.278 40.000 0.00 0.00 0.00 2.57
739 770 6.895756 ACCACACAGATAGTACTCCTTCATTA 59.104 38.462 0.00 0.00 0.00 1.90
740 771 7.147880 ACCACACAGATAGTACTCCTTCATTAC 60.148 40.741 0.00 0.00 0.00 1.89
741 772 7.203910 CACACAGATAGTACTCCTTCATTACC 58.796 42.308 0.00 0.00 0.00 2.85
742 773 6.324254 ACACAGATAGTACTCCTTCATTACCC 59.676 42.308 0.00 0.00 0.00 3.69
745 776 8.287350 ACAGATAGTACTCCTTCATTACCCTAA 58.713 37.037 0.00 0.00 0.00 2.69
747 778 9.725206 AGATAGTACTCCTTCATTACCCTAAAA 57.275 33.333 0.00 0.00 0.00 1.52
878 3285 1.061131 GATGTTGGAGTCATCGTTGCG 59.939 52.381 0.00 0.00 33.60 4.85
898 3305 0.528017 TGCGTTGGCAAACTGTCAAA 59.472 45.000 0.00 0.00 44.23 2.69
899 3306 1.067565 TGCGTTGGCAAACTGTCAAAA 60.068 42.857 0.00 0.00 44.23 2.44
900 3307 2.200899 GCGTTGGCAAACTGTCAAAAT 58.799 42.857 0.00 0.00 44.23 1.82
901 3308 2.218530 GCGTTGGCAAACTGTCAAAATC 59.781 45.455 0.00 0.00 44.23 2.17
902 3309 3.705604 CGTTGGCAAACTGTCAAAATCT 58.294 40.909 0.00 0.00 44.23 2.40
903 3310 3.486841 CGTTGGCAAACTGTCAAAATCTG 59.513 43.478 0.00 0.00 44.23 2.90
904 3311 4.432712 GTTGGCAAACTGTCAAAATCTGT 58.567 39.130 0.00 0.00 44.23 3.41
905 3312 4.734398 TGGCAAACTGTCAAAATCTGTT 57.266 36.364 0.00 0.00 0.00 3.16
906 3313 4.431809 TGGCAAACTGTCAAAATCTGTTG 58.568 39.130 0.00 0.00 0.00 3.33
907 3314 3.803778 GGCAAACTGTCAAAATCTGTTGG 59.196 43.478 0.00 0.00 0.00 3.77
908 3315 3.245990 GCAAACTGTCAAAATCTGTTGGC 59.754 43.478 0.00 0.00 36.85 4.52
909 3316 4.685924 CAAACTGTCAAAATCTGTTGGCT 58.314 39.130 0.00 0.00 34.13 4.75
910 3317 5.735922 GCAAACTGTCAAAATCTGTTGGCTA 60.736 40.000 7.46 0.00 39.16 3.93
911 3318 5.695851 AACTGTCAAAATCTGTTGGCTAG 57.304 39.130 0.00 0.00 34.13 3.42
914 3321 2.742053 GTCAAAATCTGTTGGCTAGCGA 59.258 45.455 9.00 0.68 30.23 4.93
969 3560 0.179094 CGCACTATAAACAGCCCCGA 60.179 55.000 0.00 0.00 0.00 5.14
1125 3781 4.569023 CCTCCGTATCGCAGCGCA 62.569 66.667 10.87 0.00 0.00 6.09
1126 3782 2.355126 CTCCGTATCGCAGCGCAT 60.355 61.111 10.87 7.44 0.00 4.73
1128 3784 2.961721 CCGTATCGCAGCGCATGT 60.962 61.111 10.87 0.00 0.00 3.21
1138 3794 3.869272 GCGCATGTGCCTCCTTCG 61.869 66.667 20.70 0.00 37.91 3.79
1396 4052 3.000684 TCATGTACGTGGAGCTCTACT 57.999 47.619 25.42 15.68 0.00 2.57
1453 4109 1.544825 CCTCGACAAGCTCTTCCCCA 61.545 60.000 0.00 0.00 0.00 4.96
1455 4111 0.541998 TCGACAAGCTCTTCCCCAGA 60.542 55.000 0.00 0.00 0.00 3.86
1680 4336 1.006102 CAACGTCCTCAACCTCGCT 60.006 57.895 0.00 0.00 0.00 4.93
2061 4717 0.813610 CCACCGTTCTTGTCAGCACA 60.814 55.000 0.00 0.00 0.00 4.57
2067 4723 0.880278 TTCTTGTCAGCACAGTCGCC 60.880 55.000 0.00 0.00 32.71 5.54
2128 4784 0.250234 CATCGGTTCCTTCCTCAGCA 59.750 55.000 0.00 0.00 0.00 4.41
2135 4791 0.841961 TCCTTCCTCAGCATCATGGG 59.158 55.000 0.00 0.00 0.00 4.00
2229 4885 1.227380 GATCGTCGCCATCCTGCTT 60.227 57.895 0.00 0.00 0.00 3.91
2247 4903 3.283684 CTCGGGGCGTTTGTTGCA 61.284 61.111 0.00 0.00 0.00 4.08
2292 7351 4.406456 TGTTGGACATCATAGGCACTTTT 58.594 39.130 0.00 0.00 41.75 2.27
2296 7355 6.757897 TGGACATCATAGGCACTTTTTAAG 57.242 37.500 0.00 0.00 41.75 1.85
2298 7357 7.118723 TGGACATCATAGGCACTTTTTAAGAT 58.881 34.615 0.00 0.00 41.75 2.40
2300 7359 8.560374 GGACATCATAGGCACTTTTTAAGATAC 58.440 37.037 0.00 0.00 41.75 2.24
2301 7360 9.331282 GACATCATAGGCACTTTTTAAGATACT 57.669 33.333 0.00 0.00 41.75 2.12
2302 7361 9.331282 ACATCATAGGCACTTTTTAAGATACTC 57.669 33.333 0.00 0.00 41.75 2.59
2329 10649 6.522054 TCCTTTTAGGTGTGCTAGCATATAC 58.478 40.000 22.51 18.92 36.53 1.47
2358 10678 6.463995 ACAAAACAAGCCAAGTGATCTTAA 57.536 33.333 0.00 0.00 32.07 1.85
2360 10680 7.500141 ACAAAACAAGCCAAGTGATCTTAATT 58.500 30.769 0.00 0.00 32.07 1.40
2361 10681 7.986889 ACAAAACAAGCCAAGTGATCTTAATTT 59.013 29.630 0.00 0.00 32.07 1.82
2362 10682 9.474920 CAAAACAAGCCAAGTGATCTTAATTTA 57.525 29.630 0.00 0.00 32.07 1.40
2366 10686 9.686683 ACAAGCCAAGTGATCTTAATTTATACT 57.313 29.630 0.00 0.00 32.07 2.12
2369 10689 9.343539 AGCCAAGTGATCTTAATTTATACTTCC 57.656 33.333 0.00 0.00 32.07 3.46
2370 10690 9.343539 GCCAAGTGATCTTAATTTATACTTCCT 57.656 33.333 0.00 0.00 32.07 3.36
2382 10702 8.928270 AATTTATACTTCCTCTGTGTAAGACG 57.072 34.615 0.00 0.00 0.00 4.18
2383 10703 7.458409 TTTATACTTCCTCTGTGTAAGACGT 57.542 36.000 0.00 0.00 0.00 4.34
2384 10704 5.979288 ATACTTCCTCTGTGTAAGACGTT 57.021 39.130 0.00 0.00 0.00 3.99
2385 10705 4.667519 ACTTCCTCTGTGTAAGACGTTT 57.332 40.909 0.00 0.00 0.00 3.60
2386 10706 5.019785 ACTTCCTCTGTGTAAGACGTTTT 57.980 39.130 0.00 0.00 0.00 2.43
2387 10707 5.425630 ACTTCCTCTGTGTAAGACGTTTTT 58.574 37.500 0.00 0.00 0.00 1.94
2388 10708 5.522824 ACTTCCTCTGTGTAAGACGTTTTTC 59.477 40.000 0.00 0.00 0.00 2.29
2389 10709 5.272283 TCCTCTGTGTAAGACGTTTTTCT 57.728 39.130 0.00 0.00 0.00 2.52
2390 10710 5.047847 TCCTCTGTGTAAGACGTTTTTCTG 58.952 41.667 0.00 0.00 0.00 3.02
2391 10711 4.318831 CCTCTGTGTAAGACGTTTTTCTGC 60.319 45.833 0.00 0.00 0.00 4.26
2392 10712 4.185394 TCTGTGTAAGACGTTTTTCTGCA 58.815 39.130 0.00 0.00 0.00 4.41
2393 10713 4.033587 TCTGTGTAAGACGTTTTTCTGCAC 59.966 41.667 0.00 3.19 34.99 4.57
2394 10714 3.936453 TGTGTAAGACGTTTTTCTGCACT 59.064 39.130 0.00 0.00 35.24 4.40
2395 10715 5.110598 TGTGTAAGACGTTTTTCTGCACTA 58.889 37.500 0.00 0.00 35.24 2.74
2396 10716 5.233476 TGTGTAAGACGTTTTTCTGCACTAG 59.767 40.000 0.00 0.00 35.24 2.57
2397 10717 5.233689 GTGTAAGACGTTTTTCTGCACTAGT 59.766 40.000 0.00 0.00 33.21 2.57
2398 10718 4.795970 AAGACGTTTTTCTGCACTAGTG 57.204 40.909 18.93 18.93 0.00 2.74
2399 10719 3.793559 AGACGTTTTTCTGCACTAGTGT 58.206 40.909 23.44 0.00 0.00 3.55
2400 10720 3.802685 AGACGTTTTTCTGCACTAGTGTC 59.197 43.478 23.44 15.87 0.00 3.67
2401 10721 3.793559 ACGTTTTTCTGCACTAGTGTCT 58.206 40.909 23.44 0.00 0.00 3.41
2402 10722 3.802685 ACGTTTTTCTGCACTAGTGTCTC 59.197 43.478 23.44 8.27 0.00 3.36
2403 10723 4.051922 CGTTTTTCTGCACTAGTGTCTCT 58.948 43.478 23.44 0.00 0.00 3.10
2404 10724 4.084849 CGTTTTTCTGCACTAGTGTCTCTG 60.085 45.833 23.44 11.25 0.00 3.35
2405 10725 4.672587 TTTTCTGCACTAGTGTCTCTGT 57.327 40.909 23.44 0.00 0.00 3.41
2406 10726 3.924918 TTCTGCACTAGTGTCTCTGTC 57.075 47.619 23.44 6.13 0.00 3.51
2407 10727 2.163509 TCTGCACTAGTGTCTCTGTCC 58.836 52.381 23.44 5.42 0.00 4.02
2408 10728 2.166829 CTGCACTAGTGTCTCTGTCCT 58.833 52.381 23.44 0.00 0.00 3.85
2409 10729 3.009143 TCTGCACTAGTGTCTCTGTCCTA 59.991 47.826 23.44 0.00 0.00 2.94
2410 10730 3.348119 TGCACTAGTGTCTCTGTCCTAG 58.652 50.000 23.44 0.00 34.44 3.02
2411 10731 3.244946 TGCACTAGTGTCTCTGTCCTAGT 60.245 47.826 23.44 0.00 40.45 2.57
2412 10732 4.955925 CACTAGTGTCTCTGTCCTAGTG 57.044 50.000 15.06 10.28 46.24 2.74
2413 10733 4.328536 CACTAGTGTCTCTGTCCTAGTGT 58.671 47.826 15.06 0.00 46.26 3.55
2414 10734 4.393680 CACTAGTGTCTCTGTCCTAGTGTC 59.606 50.000 15.06 0.00 46.26 3.67
2415 10735 3.510531 AGTGTCTCTGTCCTAGTGTCA 57.489 47.619 0.00 0.00 0.00 3.58
2416 10736 3.833732 AGTGTCTCTGTCCTAGTGTCAA 58.166 45.455 0.00 0.00 0.00 3.18
2417 10737 4.215908 AGTGTCTCTGTCCTAGTGTCAAA 58.784 43.478 0.00 0.00 0.00 2.69
2418 10738 4.038162 AGTGTCTCTGTCCTAGTGTCAAAC 59.962 45.833 0.00 0.00 0.00 2.93
2419 10739 3.958147 TGTCTCTGTCCTAGTGTCAAACA 59.042 43.478 0.00 0.00 0.00 2.83
2420 10740 4.404394 TGTCTCTGTCCTAGTGTCAAACAA 59.596 41.667 0.00 0.00 0.00 2.83
2421 10741 5.105106 TGTCTCTGTCCTAGTGTCAAACAAA 60.105 40.000 0.00 0.00 0.00 2.83
2422 10742 5.463724 GTCTCTGTCCTAGTGTCAAACAAAG 59.536 44.000 0.00 0.00 0.00 2.77
2423 10743 5.128827 TCTCTGTCCTAGTGTCAAACAAAGT 59.871 40.000 0.00 0.00 0.00 2.66
2424 10744 5.357257 TCTGTCCTAGTGTCAAACAAAGTC 58.643 41.667 0.00 0.00 0.00 3.01
2425 10745 5.128827 TCTGTCCTAGTGTCAAACAAAGTCT 59.871 40.000 0.00 0.00 0.00 3.24
2426 10746 5.741011 TGTCCTAGTGTCAAACAAAGTCTT 58.259 37.500 0.00 0.00 0.00 3.01
2427 10747 6.880484 TGTCCTAGTGTCAAACAAAGTCTTA 58.120 36.000 0.00 0.00 0.00 2.10
2428 10748 6.759827 TGTCCTAGTGTCAAACAAAGTCTTAC 59.240 38.462 0.00 0.00 0.00 2.34
2429 10749 6.759827 GTCCTAGTGTCAAACAAAGTCTTACA 59.240 38.462 0.00 0.00 0.00 2.41
2430 10750 7.441458 GTCCTAGTGTCAAACAAAGTCTTACAT 59.559 37.037 0.00 0.00 0.00 2.29
2431 10751 7.990886 TCCTAGTGTCAAACAAAGTCTTACATT 59.009 33.333 0.00 0.00 0.00 2.71
2432 10752 9.268268 CCTAGTGTCAAACAAAGTCTTACATTA 57.732 33.333 0.00 0.00 0.00 1.90
2435 10755 8.567948 AGTGTCAAACAAAGTCTTACATTATGG 58.432 33.333 0.00 0.00 0.00 2.74
2436 10756 7.807907 GTGTCAAACAAAGTCTTACATTATGGG 59.192 37.037 0.00 0.00 0.00 4.00
2437 10757 7.721842 TGTCAAACAAAGTCTTACATTATGGGA 59.278 33.333 0.00 0.00 0.00 4.37
2438 10758 8.021396 GTCAAACAAAGTCTTACATTATGGGAC 58.979 37.037 0.00 2.60 0.00 4.46
2439 10759 6.737254 AACAAAGTCTTACATTATGGGACG 57.263 37.500 0.00 0.00 32.86 4.79
2440 10760 6.045072 ACAAAGTCTTACATTATGGGACGA 57.955 37.500 0.00 0.00 32.86 4.20
2441 10761 6.469410 ACAAAGTCTTACATTATGGGACGAA 58.531 36.000 0.00 0.00 32.86 3.85
2442 10762 6.594159 ACAAAGTCTTACATTATGGGACGAAG 59.406 38.462 0.00 1.39 32.86 3.79
2443 10763 5.277857 AGTCTTACATTATGGGACGAAGG 57.722 43.478 0.00 0.00 32.86 3.46
2444 10764 4.960469 AGTCTTACATTATGGGACGAAGGA 59.040 41.667 0.00 0.00 32.86 3.36
2445 10765 5.424252 AGTCTTACATTATGGGACGAAGGAA 59.576 40.000 0.00 0.00 32.86 3.36
2446 10766 6.070424 AGTCTTACATTATGGGACGAAGGAAA 60.070 38.462 0.00 0.00 32.86 3.13
2447 10767 6.766467 GTCTTACATTATGGGACGAAGGAAAT 59.234 38.462 0.00 0.00 0.00 2.17
2448 10768 7.929785 GTCTTACATTATGGGACGAAGGAAATA 59.070 37.037 0.00 0.00 0.00 1.40
2452 10772 7.798071 ACATTATGGGACGAAGGAAATAGTAA 58.202 34.615 0.00 0.00 0.00 2.24
2453 10773 8.269317 ACATTATGGGACGAAGGAAATAGTAAA 58.731 33.333 0.00 0.00 0.00 2.01
2504 11210 6.721571 TTTGAGAATCCGTTGACTACATTC 57.278 37.500 0.00 0.00 0.00 2.67
2512 11218 3.317149 CCGTTGACTACATTCCGGAGATA 59.683 47.826 3.34 0.00 35.60 1.98
2520 11226 3.300388 ACATTCCGGAGATAGCTCTTCA 58.700 45.455 3.34 0.00 41.06 3.02
2530 11236 1.379527 TAGCTCTTCACGAGATCGCA 58.620 50.000 1.39 0.00 42.62 5.10
2531 11237 0.743688 AGCTCTTCACGAGATCGCAT 59.256 50.000 1.39 0.00 42.62 4.73
2533 11239 2.556189 AGCTCTTCACGAGATCGCATAT 59.444 45.455 1.39 0.00 42.62 1.78
2534 11240 2.914214 GCTCTTCACGAGATCGCATATC 59.086 50.000 1.39 0.00 42.62 1.63
2535 11241 3.610349 GCTCTTCACGAGATCGCATATCA 60.610 47.826 1.39 0.00 42.62 2.15
2546 11252 2.807676 TCGCATATCATGGGAGCTAGA 58.192 47.619 0.00 0.00 45.72 2.43
2632 11338 0.555769 TCAGTGGGAGGTGGCTTTTT 59.444 50.000 0.00 0.00 0.00 1.94
2643 11349 1.740025 GTGGCTTTTTCGCTATGCTCT 59.260 47.619 0.00 0.00 0.00 4.09
2691 11397 0.957888 GAGCACTCACCCCTGCTTTC 60.958 60.000 0.00 0.00 43.94 2.62
2702 11409 1.153086 CTGCTTTCCTCATCGGGGG 60.153 63.158 0.00 0.00 0.00 5.40
2703 11410 1.615124 TGCTTTCCTCATCGGGGGA 60.615 57.895 0.00 0.00 0.00 4.81
2708 11415 2.844839 CCTCATCGGGGGAGGGTC 60.845 72.222 9.29 0.00 46.65 4.46
2709 11416 2.844839 CTCATCGGGGGAGGGTCC 60.845 72.222 0.00 0.00 35.23 4.46
2783 11493 1.134946 GTTTTGTGGAAGCAGTGCAGT 59.865 47.619 19.20 4.15 0.00 4.40
2800 11510 1.145571 AGTTTAGGTGGGTGAAGGCA 58.854 50.000 0.00 0.00 0.00 4.75
2804 11514 0.252513 TAGGTGGGTGAAGGCAGCTA 60.253 55.000 0.00 0.00 42.08 3.32
2809 11519 2.047274 GTGAAGGCAGCTACCGCA 60.047 61.111 0.00 0.00 39.10 5.69
2833 11543 2.557317 CGTAGGGTGTTCTGTGTTGTT 58.443 47.619 0.00 0.00 0.00 2.83
2870 11580 4.614555 TGTGACAAATCAGTGTGACAAC 57.385 40.909 0.00 0.00 41.72 3.32
2871 11581 3.376859 TGTGACAAATCAGTGTGACAACC 59.623 43.478 0.00 0.00 41.72 3.77
2888 11598 3.264052 CCATGTGTGGGTGGGGGA 61.264 66.667 0.00 0.00 42.11 4.81
2890 11600 2.941025 ATGTGTGGGTGGGGGAGG 60.941 66.667 0.00 0.00 0.00 4.30
2933 11808 3.415212 CAGATCAAGGTGTTGGATGTGT 58.585 45.455 0.00 0.00 34.09 3.72
3002 11877 3.054802 CACCCTCAAAGCCTCTCTTATGT 60.055 47.826 0.00 0.00 33.88 2.29
3004 11879 4.971924 ACCCTCAAAGCCTCTCTTATGTAT 59.028 41.667 0.00 0.00 33.88 2.29
3041 11916 1.667830 CTTTTCTGGCAGCGTCGGA 60.668 57.895 10.34 0.00 0.00 4.55
3165 12046 2.626785 TGTTTGTGGGAGGGAGATGTA 58.373 47.619 0.00 0.00 0.00 2.29
3258 12139 0.179054 GCTATGGGGTTTCTCCGACC 60.179 60.000 0.00 0.00 37.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.566837 TCCCCTGCTTTCTATCCATAGAA 58.433 43.478 5.11 5.11 45.02 2.10
35 36 4.213531 TCCCCTGCTTTCTATCCATAGA 57.786 45.455 0.00 0.00 37.60 1.98
36 37 4.382470 CGATCCCCTGCTTTCTATCCATAG 60.382 50.000 0.00 0.00 0.00 2.23
37 38 3.515502 CGATCCCCTGCTTTCTATCCATA 59.484 47.826 0.00 0.00 0.00 2.74
38 39 2.304180 CGATCCCCTGCTTTCTATCCAT 59.696 50.000 0.00 0.00 0.00 3.41
39 40 1.694150 CGATCCCCTGCTTTCTATCCA 59.306 52.381 0.00 0.00 0.00 3.41
40 41 1.002544 CCGATCCCCTGCTTTCTATCC 59.997 57.143 0.00 0.00 0.00 2.59
41 42 1.971357 TCCGATCCCCTGCTTTCTATC 59.029 52.381 0.00 0.00 0.00 2.08
42 43 1.974236 CTCCGATCCCCTGCTTTCTAT 59.026 52.381 0.00 0.00 0.00 1.98
43 44 1.414158 CTCCGATCCCCTGCTTTCTA 58.586 55.000 0.00 0.00 0.00 2.10
44 45 1.341156 CCTCCGATCCCCTGCTTTCT 61.341 60.000 0.00 0.00 0.00 2.52
45 46 1.147153 CCTCCGATCCCCTGCTTTC 59.853 63.158 0.00 0.00 0.00 2.62
46 47 1.306997 TCCTCCGATCCCCTGCTTT 60.307 57.895 0.00 0.00 0.00 3.51
47 48 1.764054 CTCCTCCGATCCCCTGCTT 60.764 63.158 0.00 0.00 0.00 3.91
48 49 2.123077 CTCCTCCGATCCCCTGCT 60.123 66.667 0.00 0.00 0.00 4.24
49 50 2.123251 TCTCCTCCGATCCCCTGC 60.123 66.667 0.00 0.00 0.00 4.85
50 51 0.478942 TACTCTCCTCCGATCCCCTG 59.521 60.000 0.00 0.00 0.00 4.45
51 52 0.479378 GTACTCTCCTCCGATCCCCT 59.521 60.000 0.00 0.00 0.00 4.79
52 53 0.540133 GGTACTCTCCTCCGATCCCC 60.540 65.000 0.00 0.00 0.00 4.81
53 54 0.479378 AGGTACTCTCCTCCGATCCC 59.521 60.000 0.00 0.00 31.32 3.85
54 55 2.158579 AGAAGGTACTCTCCTCCGATCC 60.159 54.545 0.00 0.00 38.49 3.36
55 56 3.217681 AGAAGGTACTCTCCTCCGATC 57.782 52.381 0.00 0.00 38.49 3.69
56 57 3.073356 CCTAGAAGGTACTCTCCTCCGAT 59.927 52.174 0.00 0.00 38.49 4.18
57 58 2.438763 CCTAGAAGGTACTCTCCTCCGA 59.561 54.545 0.00 0.00 38.49 4.55
58 59 2.438763 TCCTAGAAGGTACTCTCCTCCG 59.561 54.545 0.00 0.00 38.49 4.63
59 60 4.403734 CATCCTAGAAGGTACTCTCCTCC 58.596 52.174 0.00 0.00 38.49 4.30
60 61 4.105057 TCCATCCTAGAAGGTACTCTCCTC 59.895 50.000 0.00 0.00 38.49 3.71
61 62 4.055820 TCCATCCTAGAAGGTACTCTCCT 58.944 47.826 0.00 0.00 38.49 3.69
62 63 4.456662 TCCATCCTAGAAGGTACTCTCC 57.543 50.000 0.00 0.00 38.49 3.71
63 64 5.245075 CCATTCCATCCTAGAAGGTACTCTC 59.755 48.000 0.00 0.00 38.49 3.20
64 65 5.151454 CCATTCCATCCTAGAAGGTACTCT 58.849 45.833 0.00 0.00 38.49 3.24
65 66 4.902448 ACCATTCCATCCTAGAAGGTACTC 59.098 45.833 0.00 0.00 38.49 2.59
67 68 4.654262 TCACCATTCCATCCTAGAAGGTAC 59.346 45.833 0.00 0.00 36.53 3.34
68 69 4.654262 GTCACCATTCCATCCTAGAAGGTA 59.346 45.833 0.00 0.00 36.53 3.08
69 70 3.456277 GTCACCATTCCATCCTAGAAGGT 59.544 47.826 0.00 0.00 36.53 3.50
70 71 3.493350 CGTCACCATTCCATCCTAGAAGG 60.493 52.174 0.00 0.00 36.46 3.46
71 72 3.384789 TCGTCACCATTCCATCCTAGAAG 59.615 47.826 0.00 0.00 0.00 2.85
72 73 3.371034 TCGTCACCATTCCATCCTAGAA 58.629 45.455 0.00 0.00 0.00 2.10
73 74 3.026707 TCGTCACCATTCCATCCTAGA 57.973 47.619 0.00 0.00 0.00 2.43
74 75 3.819564 TTCGTCACCATTCCATCCTAG 57.180 47.619 0.00 0.00 0.00 3.02
75 76 4.771114 ATTTCGTCACCATTCCATCCTA 57.229 40.909 0.00 0.00 0.00 2.94
76 77 3.652057 ATTTCGTCACCATTCCATCCT 57.348 42.857 0.00 0.00 0.00 3.24
77 78 3.694072 TGAATTTCGTCACCATTCCATCC 59.306 43.478 0.00 0.00 0.00 3.51
78 79 4.662145 GTGAATTTCGTCACCATTCCATC 58.338 43.478 0.00 0.00 41.79 3.51
79 80 3.126858 CGTGAATTTCGTCACCATTCCAT 59.873 43.478 0.01 0.00 44.23 3.41
80 81 2.482336 CGTGAATTTCGTCACCATTCCA 59.518 45.455 0.01 0.00 44.23 3.53
81 82 2.159572 CCGTGAATTTCGTCACCATTCC 60.160 50.000 0.01 0.00 44.23 3.01
82 83 2.739913 TCCGTGAATTTCGTCACCATTC 59.260 45.455 0.01 0.00 44.23 2.67
83 84 2.482721 GTCCGTGAATTTCGTCACCATT 59.517 45.455 0.01 0.00 44.23 3.16
84 85 2.073816 GTCCGTGAATTTCGTCACCAT 58.926 47.619 0.01 0.00 44.23 3.55
85 86 1.504359 GTCCGTGAATTTCGTCACCA 58.496 50.000 0.01 0.00 44.23 4.17
86 87 0.794473 GGTCCGTGAATTTCGTCACC 59.206 55.000 0.01 5.43 44.23 4.02
87 88 1.504359 TGGTCCGTGAATTTCGTCAC 58.496 50.000 0.00 0.00 43.75 3.67
88 89 2.242047 TTGGTCCGTGAATTTCGTCA 57.758 45.000 3.97 0.00 0.00 4.35
89 90 3.723835 CGATTTGGTCCGTGAATTTCGTC 60.724 47.826 3.97 0.00 0.00 4.20
90 91 2.158841 CGATTTGGTCCGTGAATTTCGT 59.841 45.455 3.97 0.00 0.00 3.85
91 92 2.158841 ACGATTTGGTCCGTGAATTTCG 59.841 45.455 0.00 0.00 37.64 3.46
92 93 3.723835 CGACGATTTGGTCCGTGAATTTC 60.724 47.826 0.00 0.00 39.30 2.17
93 94 2.158841 CGACGATTTGGTCCGTGAATTT 59.841 45.455 0.00 0.00 39.30 1.82
94 95 1.730064 CGACGATTTGGTCCGTGAATT 59.270 47.619 0.00 0.00 39.30 2.17
95 96 1.355971 CGACGATTTGGTCCGTGAAT 58.644 50.000 0.00 0.00 39.30 2.57
96 97 0.668096 CCGACGATTTGGTCCGTGAA 60.668 55.000 0.00 0.00 39.30 3.18
97 98 1.080366 CCGACGATTTGGTCCGTGA 60.080 57.895 0.00 0.00 39.30 4.35
98 99 0.459585 ATCCGACGATTTGGTCCGTG 60.460 55.000 0.00 0.00 39.30 4.94
99 100 0.248289 AATCCGACGATTTGGTCCGT 59.752 50.000 0.00 0.00 42.17 4.69
100 101 1.365699 AAATCCGACGATTTGGTCCG 58.634 50.000 0.00 0.00 45.12 4.79
107 108 4.096382 CCAAATCCTTCAAATCCGACGATT 59.904 41.667 0.00 0.00 40.58 3.34
108 109 3.627577 CCAAATCCTTCAAATCCGACGAT 59.372 43.478 0.00 0.00 0.00 3.73
109 110 3.006940 CCAAATCCTTCAAATCCGACGA 58.993 45.455 0.00 0.00 0.00 4.20
110 111 2.097466 CCCAAATCCTTCAAATCCGACG 59.903 50.000 0.00 0.00 0.00 5.12
111 112 3.352648 TCCCAAATCCTTCAAATCCGAC 58.647 45.455 0.00 0.00 0.00 4.79
112 113 3.265737 TCTCCCAAATCCTTCAAATCCGA 59.734 43.478 0.00 0.00 0.00 4.55
113 114 3.620488 TCTCCCAAATCCTTCAAATCCG 58.380 45.455 0.00 0.00 0.00 4.18
114 115 3.956848 CCTCTCCCAAATCCTTCAAATCC 59.043 47.826 0.00 0.00 0.00 3.01
115 116 3.956848 CCCTCTCCCAAATCCTTCAAATC 59.043 47.826 0.00 0.00 0.00 2.17
116 117 3.310141 CCCCTCTCCCAAATCCTTCAAAT 60.310 47.826 0.00 0.00 0.00 2.32
117 118 2.042979 CCCCTCTCCCAAATCCTTCAAA 59.957 50.000 0.00 0.00 0.00 2.69
118 119 1.640670 CCCCTCTCCCAAATCCTTCAA 59.359 52.381 0.00 0.00 0.00 2.69
119 120 1.203557 TCCCCTCTCCCAAATCCTTCA 60.204 52.381 0.00 0.00 0.00 3.02
120 121 1.596496 TCCCCTCTCCCAAATCCTTC 58.404 55.000 0.00 0.00 0.00 3.46
121 122 2.245806 CAATCCCCTCTCCCAAATCCTT 59.754 50.000 0.00 0.00 0.00 3.36
122 123 1.855599 CAATCCCCTCTCCCAAATCCT 59.144 52.381 0.00 0.00 0.00 3.24
123 124 1.852965 TCAATCCCCTCTCCCAAATCC 59.147 52.381 0.00 0.00 0.00 3.01
124 125 2.780010 TCTCAATCCCCTCTCCCAAATC 59.220 50.000 0.00 0.00 0.00 2.17
125 126 2.782341 CTCTCAATCCCCTCTCCCAAAT 59.218 50.000 0.00 0.00 0.00 2.32
126 127 2.200081 CTCTCAATCCCCTCTCCCAAA 58.800 52.381 0.00 0.00 0.00 3.28
127 128 1.626350 CCTCTCAATCCCCTCTCCCAA 60.626 57.143 0.00 0.00 0.00 4.12
128 129 0.030705 CCTCTCAATCCCCTCTCCCA 60.031 60.000 0.00 0.00 0.00 4.37
129 130 0.766288 CCCTCTCAATCCCCTCTCCC 60.766 65.000 0.00 0.00 0.00 4.30
130 131 0.766288 CCCCTCTCAATCCCCTCTCC 60.766 65.000 0.00 0.00 0.00 3.71
131 132 0.766288 CCCCCTCTCAATCCCCTCTC 60.766 65.000 0.00 0.00 0.00 3.20
132 133 1.238896 TCCCCCTCTCAATCCCCTCT 61.239 60.000 0.00 0.00 0.00 3.69
133 134 0.766288 CTCCCCCTCTCAATCCCCTC 60.766 65.000 0.00 0.00 0.00 4.30
134 135 1.319799 CTCCCCCTCTCAATCCCCT 59.680 63.158 0.00 0.00 0.00 4.79
135 136 1.004891 ACTCCCCCTCTCAATCCCC 59.995 63.158 0.00 0.00 0.00 4.81
136 137 1.348775 CCACTCCCCCTCTCAATCCC 61.349 65.000 0.00 0.00 0.00 3.85
137 138 0.326618 TCCACTCCCCCTCTCAATCC 60.327 60.000 0.00 0.00 0.00 3.01
138 139 1.813102 ATCCACTCCCCCTCTCAATC 58.187 55.000 0.00 0.00 0.00 2.67
139 140 2.428484 CCTATCCACTCCCCCTCTCAAT 60.428 54.545 0.00 0.00 0.00 2.57
140 141 1.062121 CCTATCCACTCCCCCTCTCAA 60.062 57.143 0.00 0.00 0.00 3.02
141 142 0.563173 CCTATCCACTCCCCCTCTCA 59.437 60.000 0.00 0.00 0.00 3.27
142 143 0.178918 CCCTATCCACTCCCCCTCTC 60.179 65.000 0.00 0.00 0.00 3.20
143 144 1.950244 CCCTATCCACTCCCCCTCT 59.050 63.158 0.00 0.00 0.00 3.69
144 145 1.843832 GCCCTATCCACTCCCCCTC 60.844 68.421 0.00 0.00 0.00 4.30
145 146 2.290745 GCCCTATCCACTCCCCCT 59.709 66.667 0.00 0.00 0.00 4.79
146 147 2.854523 GGCCCTATCCACTCCCCC 60.855 72.222 0.00 0.00 0.00 5.40
147 148 3.242291 CGGCCCTATCCACTCCCC 61.242 72.222 0.00 0.00 0.00 4.81
148 149 3.942439 GCGGCCCTATCCACTCCC 61.942 72.222 0.00 0.00 0.00 4.30
149 150 3.942439 GGCGGCCCTATCCACTCC 61.942 72.222 8.12 0.00 0.00 3.85
150 151 4.301027 CGGCGGCCCTATCCACTC 62.301 72.222 14.55 0.00 0.00 3.51
167 168 1.729484 GAACAAAAGAAGCCGCGGC 60.729 57.895 42.34 42.34 42.33 6.53
168 169 0.310854 AAGAACAAAAGAAGCCGCGG 59.689 50.000 24.05 24.05 0.00 6.46
169 170 1.264288 AGAAGAACAAAAGAAGCCGCG 59.736 47.619 0.00 0.00 0.00 6.46
170 171 2.033424 ACAGAAGAACAAAAGAAGCCGC 59.967 45.455 0.00 0.00 0.00 6.53
171 172 3.971032 ACAGAAGAACAAAAGAAGCCG 57.029 42.857 0.00 0.00 0.00 5.52
172 173 6.202226 CAGTTACAGAAGAACAAAAGAAGCC 58.798 40.000 0.00 0.00 0.00 4.35
173 174 5.683302 GCAGTTACAGAAGAACAAAAGAAGC 59.317 40.000 0.00 0.00 0.00 3.86
174 175 6.909357 CAGCAGTTACAGAAGAACAAAAGAAG 59.091 38.462 0.00 0.00 0.00 2.85
175 176 6.677920 GCAGCAGTTACAGAAGAACAAAAGAA 60.678 38.462 0.00 0.00 0.00 2.52
176 177 5.220854 GCAGCAGTTACAGAAGAACAAAAGA 60.221 40.000 0.00 0.00 0.00 2.52
177 178 4.972440 GCAGCAGTTACAGAAGAACAAAAG 59.028 41.667 0.00 0.00 0.00 2.27
178 179 4.397730 TGCAGCAGTTACAGAAGAACAAAA 59.602 37.500 0.00 0.00 0.00 2.44
179 180 3.944650 TGCAGCAGTTACAGAAGAACAAA 59.055 39.130 0.00 0.00 0.00 2.83
180 181 3.540617 TGCAGCAGTTACAGAAGAACAA 58.459 40.909 0.00 0.00 0.00 2.83
181 182 3.192541 TGCAGCAGTTACAGAAGAACA 57.807 42.857 0.00 0.00 0.00 3.18
182 183 4.470462 CATTGCAGCAGTTACAGAAGAAC 58.530 43.478 0.00 0.00 0.00 3.01
183 184 3.503363 CCATTGCAGCAGTTACAGAAGAA 59.497 43.478 0.00 0.00 0.00 2.52
184 185 3.076621 CCATTGCAGCAGTTACAGAAGA 58.923 45.455 0.00 0.00 0.00 2.87
185 186 2.163010 CCCATTGCAGCAGTTACAGAAG 59.837 50.000 0.00 0.00 0.00 2.85
186 187 2.161855 CCCATTGCAGCAGTTACAGAA 58.838 47.619 0.00 0.00 0.00 3.02
187 188 1.614051 CCCCATTGCAGCAGTTACAGA 60.614 52.381 0.00 0.00 0.00 3.41
188 189 0.813184 CCCCATTGCAGCAGTTACAG 59.187 55.000 0.00 0.00 0.00 2.74
189 190 0.112218 ACCCCATTGCAGCAGTTACA 59.888 50.000 0.00 0.00 0.00 2.41
190 191 0.527565 CACCCCATTGCAGCAGTTAC 59.472 55.000 0.00 0.00 0.00 2.50
191 192 0.611618 CCACCCCATTGCAGCAGTTA 60.612 55.000 0.00 0.00 0.00 2.24
192 193 1.909781 CCACCCCATTGCAGCAGTT 60.910 57.895 0.00 0.00 0.00 3.16
193 194 2.283388 CCACCCCATTGCAGCAGT 60.283 61.111 0.00 0.00 0.00 4.40
194 195 3.072468 CCCACCCCATTGCAGCAG 61.072 66.667 0.00 0.00 0.00 4.24
195 196 3.913445 ACCCACCCCATTGCAGCA 61.913 61.111 0.00 0.00 0.00 4.41
196 197 3.384532 CACCCACCCCATTGCAGC 61.385 66.667 0.00 0.00 0.00 5.25
197 198 2.681064 CCACCCACCCCATTGCAG 60.681 66.667 0.00 0.00 0.00 4.41
198 199 4.313707 CCCACCCACCCCATTGCA 62.314 66.667 0.00 0.00 0.00 4.08
200 201 4.397010 CCCCCACCCACCCCATTG 62.397 72.222 0.00 0.00 0.00 2.82
201 202 4.645252 TCCCCCACCCACCCCATT 62.645 66.667 0.00 0.00 0.00 3.16
206 207 4.348495 TCTCCTCCCCCACCCACC 62.348 72.222 0.00 0.00 0.00 4.61
207 208 2.689034 CTCTCCTCCCCCACCCAC 60.689 72.222 0.00 0.00 0.00 4.61
208 209 4.024984 CCTCTCCTCCCCCACCCA 62.025 72.222 0.00 0.00 0.00 4.51
209 210 4.825679 CCCTCTCCTCCCCCACCC 62.826 77.778 0.00 0.00 0.00 4.61
229 230 2.967615 GTTAGATCCAGCCGCGGC 60.968 66.667 42.34 42.34 42.33 6.53
230 231 1.300233 GAGTTAGATCCAGCCGCGG 60.300 63.158 24.05 24.05 0.00 6.46
231 232 0.872021 GTGAGTTAGATCCAGCCGCG 60.872 60.000 0.00 0.00 0.00 6.46
232 233 0.175760 TGTGAGTTAGATCCAGCCGC 59.824 55.000 0.00 0.00 0.00 6.53
233 234 2.672961 TTGTGAGTTAGATCCAGCCG 57.327 50.000 0.00 0.00 0.00 5.52
234 235 2.615912 GCATTGTGAGTTAGATCCAGCC 59.384 50.000 0.00 0.00 0.00 4.85
235 236 3.273434 TGCATTGTGAGTTAGATCCAGC 58.727 45.455 0.00 0.00 0.00 4.85
236 237 3.311871 GCTGCATTGTGAGTTAGATCCAG 59.688 47.826 0.00 0.00 0.00 3.86
237 238 3.054875 AGCTGCATTGTGAGTTAGATCCA 60.055 43.478 1.02 0.00 0.00 3.41
238 239 3.539604 AGCTGCATTGTGAGTTAGATCC 58.460 45.455 1.02 0.00 0.00 3.36
239 240 3.559242 GGAGCTGCATTGTGAGTTAGATC 59.441 47.826 0.00 0.00 0.00 2.75
240 241 3.539604 GGAGCTGCATTGTGAGTTAGAT 58.460 45.455 0.00 0.00 0.00 1.98
241 242 2.355108 GGGAGCTGCATTGTGAGTTAGA 60.355 50.000 7.79 0.00 0.00 2.10
242 243 2.012673 GGGAGCTGCATTGTGAGTTAG 58.987 52.381 7.79 0.00 0.00 2.34
243 244 1.675714 CGGGAGCTGCATTGTGAGTTA 60.676 52.381 7.79 0.00 0.00 2.24
244 245 0.957395 CGGGAGCTGCATTGTGAGTT 60.957 55.000 7.79 0.00 0.00 3.01
245 246 1.376424 CGGGAGCTGCATTGTGAGT 60.376 57.895 7.79 0.00 0.00 3.41
246 247 1.078918 TCGGGAGCTGCATTGTGAG 60.079 57.895 7.79 0.00 0.00 3.51
247 248 1.375908 GTCGGGAGCTGCATTGTGA 60.376 57.895 7.79 0.00 0.00 3.58
248 249 2.743752 CGTCGGGAGCTGCATTGTG 61.744 63.158 7.79 0.00 0.00 3.33
249 250 2.434884 CGTCGGGAGCTGCATTGT 60.435 61.111 7.79 0.00 0.00 2.71
250 251 3.197790 CCGTCGGGAGCTGCATTG 61.198 66.667 7.79 0.00 34.06 2.82
254 255 4.577246 CTAGCCGTCGGGAGCTGC 62.577 72.222 14.38 0.00 40.28 5.25
255 256 3.905678 CCTAGCCGTCGGGAGCTG 61.906 72.222 14.38 0.00 40.28 4.24
267 268 4.498537 CACATAATGTGCAGCGCCTAGC 62.499 54.545 2.29 7.01 41.89 3.42
268 269 1.262417 CACATAATGTGCAGCGCCTAG 59.738 52.381 2.29 0.00 41.89 3.02
269 270 1.298602 CACATAATGTGCAGCGCCTA 58.701 50.000 2.29 0.00 41.89 3.93
270 271 2.100846 CACATAATGTGCAGCGCCT 58.899 52.632 2.29 0.00 41.89 5.52
271 272 4.696078 CACATAATGTGCAGCGCC 57.304 55.556 2.29 0.00 41.89 6.53
279 280 3.623703 TCTGAGGCATTGCACATAATGT 58.376 40.909 11.39 0.00 39.62 2.71
280 281 3.550233 GCTCTGAGGCATTGCACATAATG 60.550 47.826 11.39 0.00 40.25 1.90
281 282 2.621998 GCTCTGAGGCATTGCACATAAT 59.378 45.455 11.39 0.00 0.00 1.28
282 283 2.019249 GCTCTGAGGCATTGCACATAA 58.981 47.619 11.39 1.63 0.00 1.90
283 284 1.211212 AGCTCTGAGGCATTGCACATA 59.789 47.619 11.39 2.53 34.17 2.29
284 285 0.034380 AGCTCTGAGGCATTGCACAT 60.034 50.000 11.39 0.00 34.17 3.21
285 286 0.614812 TAGCTCTGAGGCATTGCACA 59.385 50.000 11.39 9.02 34.17 4.57
286 287 1.297664 CTAGCTCTGAGGCATTGCAC 58.702 55.000 11.39 4.64 34.17 4.57
287 288 0.179702 CCTAGCTCTGAGGCATTGCA 59.820 55.000 11.39 0.00 34.17 4.08
288 289 3.003740 CCTAGCTCTGAGGCATTGC 57.996 57.895 6.83 0.00 34.17 3.56
302 303 2.278857 CTACGGTGCAGCGCCTAG 60.279 66.667 35.78 25.87 0.00 3.02
303 304 3.833645 CCTACGGTGCAGCGCCTA 61.834 66.667 35.78 21.25 0.00 3.93
335 336 4.627801 TTTGTGTAGCGCCCGCCA 62.628 61.111 2.29 0.00 43.17 5.69
336 337 3.322706 CTTTTGTGTAGCGCCCGCC 62.323 63.158 2.29 0.00 43.17 6.13
337 338 2.175811 CTTTTGTGTAGCGCCCGC 59.824 61.111 2.29 4.20 42.33 6.13
338 339 2.686816 CCCTTTTGTGTAGCGCCCG 61.687 63.158 2.29 0.00 0.00 6.13
339 340 1.583495 GACCCTTTTGTGTAGCGCCC 61.583 60.000 2.29 0.00 0.00 6.13
340 341 0.887387 TGACCCTTTTGTGTAGCGCC 60.887 55.000 2.29 0.00 0.00 6.53
341 342 0.517316 CTGACCCTTTTGTGTAGCGC 59.483 55.000 0.00 0.00 0.00 5.92
342 343 1.156736 CCTGACCCTTTTGTGTAGCG 58.843 55.000 0.00 0.00 0.00 4.26
343 344 2.561478 TCCTGACCCTTTTGTGTAGC 57.439 50.000 0.00 0.00 0.00 3.58
344 345 5.046591 TCACTATCCTGACCCTTTTGTGTAG 60.047 44.000 0.00 0.00 0.00 2.74
345 346 4.841813 TCACTATCCTGACCCTTTTGTGTA 59.158 41.667 0.00 0.00 0.00 2.90
346 347 3.650942 TCACTATCCTGACCCTTTTGTGT 59.349 43.478 0.00 0.00 0.00 3.72
347 348 4.286297 TCACTATCCTGACCCTTTTGTG 57.714 45.455 0.00 0.00 0.00 3.33
348 349 4.993705 TTCACTATCCTGACCCTTTTGT 57.006 40.909 0.00 0.00 0.00 2.83
349 350 7.112779 ACTATTTCACTATCCTGACCCTTTTG 58.887 38.462 0.00 0.00 0.00 2.44
350 351 7.272144 ACTATTTCACTATCCTGACCCTTTT 57.728 36.000 0.00 0.00 0.00 2.27
351 352 6.893020 ACTATTTCACTATCCTGACCCTTT 57.107 37.500 0.00 0.00 0.00 3.11
352 353 6.893020 AACTATTTCACTATCCTGACCCTT 57.107 37.500 0.00 0.00 0.00 3.95
353 354 6.443849 TGAAACTATTTCACTATCCTGACCCT 59.556 38.462 0.00 0.00 44.21 4.34
354 355 6.650120 TGAAACTATTTCACTATCCTGACCC 58.350 40.000 0.00 0.00 44.21 4.46
366 367 6.968263 TGAAATGGGTGTGAAACTATTTCA 57.032 33.333 10.18 10.18 46.68 2.69
367 368 8.306761 AGAATGAAATGGGTGTGAAACTATTTC 58.693 33.333 5.84 5.84 39.75 2.17
368 369 8.090214 CAGAATGAAATGGGTGTGAAACTATTT 58.910 33.333 0.00 0.00 39.69 1.40
369 370 7.233348 ACAGAATGAAATGGGTGTGAAACTATT 59.767 33.333 0.00 0.00 39.69 1.73
370 371 6.721208 ACAGAATGAAATGGGTGTGAAACTAT 59.279 34.615 0.00 0.00 39.69 2.12
371 372 6.016360 CACAGAATGAAATGGGTGTGAAACTA 60.016 38.462 0.00 0.00 39.69 2.24
372 373 4.895297 ACAGAATGAAATGGGTGTGAAACT 59.105 37.500 0.00 0.00 39.69 2.66
373 374 4.984161 CACAGAATGAAATGGGTGTGAAAC 59.016 41.667 0.00 0.00 39.69 2.78
374 375 4.892345 TCACAGAATGAAATGGGTGTGAAA 59.108 37.500 0.61 0.00 37.84 2.69
375 376 4.468713 TCACAGAATGAAATGGGTGTGAA 58.531 39.130 0.61 0.00 37.84 3.18
376 377 4.097551 TCACAGAATGAAATGGGTGTGA 57.902 40.909 0.00 0.00 39.69 3.58
377 378 4.852134 TTCACAGAATGAAATGGGTGTG 57.148 40.909 0.00 0.00 44.59 3.82
387 388 5.163864 CGGACGAAATCAATTCACAGAATGA 60.164 40.000 0.00 0.00 36.47 2.57
388 389 5.023920 CGGACGAAATCAATTCACAGAATG 58.976 41.667 0.00 0.00 37.96 2.67
389 390 4.094887 CCGGACGAAATCAATTCACAGAAT 59.905 41.667 0.00 0.00 37.96 2.40
390 391 3.435327 CCGGACGAAATCAATTCACAGAA 59.565 43.478 0.00 0.00 37.96 3.02
391 392 3.000041 CCGGACGAAATCAATTCACAGA 59.000 45.455 0.00 0.00 37.96 3.41
392 393 3.000041 TCCGGACGAAATCAATTCACAG 59.000 45.455 0.00 0.00 37.96 3.66
393 394 3.000041 CTCCGGACGAAATCAATTCACA 59.000 45.455 0.00 0.00 37.96 3.58
394 395 2.351726 CCTCCGGACGAAATCAATTCAC 59.648 50.000 0.00 0.00 37.96 3.18
395 396 2.027561 ACCTCCGGACGAAATCAATTCA 60.028 45.455 0.00 0.00 37.96 2.57
396 397 2.629051 ACCTCCGGACGAAATCAATTC 58.371 47.619 0.00 0.00 34.52 2.17
397 398 2.781681 ACCTCCGGACGAAATCAATT 57.218 45.000 0.00 0.00 0.00 2.32
398 399 2.781681 AACCTCCGGACGAAATCAAT 57.218 45.000 0.00 0.00 0.00 2.57
399 400 3.681593 TTAACCTCCGGACGAAATCAA 57.318 42.857 0.00 0.00 0.00 2.57
400 401 3.681593 TTTAACCTCCGGACGAAATCA 57.318 42.857 0.00 0.00 0.00 2.57
401 402 5.106436 ACAATTTTAACCTCCGGACGAAATC 60.106 40.000 0.00 0.00 0.00 2.17
402 403 4.763279 ACAATTTTAACCTCCGGACGAAAT 59.237 37.500 0.00 0.05 0.00 2.17
403 404 4.136051 ACAATTTTAACCTCCGGACGAAA 58.864 39.130 0.00 0.00 0.00 3.46
404 405 3.742385 ACAATTTTAACCTCCGGACGAA 58.258 40.909 0.00 0.00 0.00 3.85
405 406 3.244146 TGACAATTTTAACCTCCGGACGA 60.244 43.478 0.00 0.00 0.00 4.20
406 407 3.068560 TGACAATTTTAACCTCCGGACG 58.931 45.455 0.00 0.00 0.00 4.79
407 408 5.441709 TTTGACAATTTTAACCTCCGGAC 57.558 39.130 0.00 0.00 0.00 4.79
408 409 6.658188 AATTTGACAATTTTAACCTCCGGA 57.342 33.333 2.93 2.93 0.00 5.14
409 410 6.347321 GCAAATTTGACAATTTTAACCTCCGG 60.347 38.462 22.31 0.00 40.09 5.14
410 411 6.347321 GGCAAATTTGACAATTTTAACCTCCG 60.347 38.462 22.31 0.00 40.09 4.63
411 412 6.484977 TGGCAAATTTGACAATTTTAACCTCC 59.515 34.615 24.47 9.17 44.72 4.30
412 413 7.489574 TGGCAAATTTGACAATTTTAACCTC 57.510 32.000 24.47 0.00 44.72 3.85
423 424 5.534207 AATCTGTCTTGGCAAATTTGACA 57.466 34.783 22.97 22.97 46.35 3.58
424 425 6.073602 GGAAAATCTGTCTTGGCAAATTTGAC 60.074 38.462 22.31 19.99 36.50 3.18
425 426 5.990996 GGAAAATCTGTCTTGGCAAATTTGA 59.009 36.000 22.31 0.00 0.00 2.69
426 427 5.993441 AGGAAAATCTGTCTTGGCAAATTTG 59.007 36.000 14.03 14.03 0.00 2.32
427 428 5.993441 CAGGAAAATCTGTCTTGGCAAATTT 59.007 36.000 0.00 1.08 0.00 1.82
428 429 5.070847 ACAGGAAAATCTGTCTTGGCAAATT 59.929 36.000 0.00 0.00 43.82 1.82
429 430 4.590222 ACAGGAAAATCTGTCTTGGCAAAT 59.410 37.500 0.00 0.00 43.82 2.32
430 431 3.960102 ACAGGAAAATCTGTCTTGGCAAA 59.040 39.130 0.00 0.00 43.82 3.68
431 432 3.565307 ACAGGAAAATCTGTCTTGGCAA 58.435 40.909 0.00 0.00 43.82 4.52
432 433 3.228188 ACAGGAAAATCTGTCTTGGCA 57.772 42.857 0.00 0.00 43.82 4.92
433 434 3.440522 GGTACAGGAAAATCTGTCTTGGC 59.559 47.826 0.45 0.00 43.82 4.52
434 435 3.684788 CGGTACAGGAAAATCTGTCTTGG 59.315 47.826 0.45 0.00 43.82 3.61
435 436 4.152402 CACGGTACAGGAAAATCTGTCTTG 59.848 45.833 0.45 0.00 43.82 3.02
448 449 0.107848 CCTTTAGCCCACGGTACAGG 60.108 60.000 0.00 0.00 34.49 4.00
452 453 1.935799 TGTACCTTTAGCCCACGGTA 58.064 50.000 0.00 0.00 0.00 4.02
476 477 6.387192 TTTGTGATTGGATCCCTAGAAAGA 57.613 37.500 9.90 0.00 0.00 2.52
496 497 6.539649 TTTAGAGAGAACGTGACCAATTTG 57.460 37.500 0.00 0.00 0.00 2.32
503 504 2.985139 CCCGTTTTAGAGAGAACGTGAC 59.015 50.000 7.68 0.00 45.12 3.67
510 511 3.022406 GACCTAGCCCGTTTTAGAGAGA 58.978 50.000 0.00 0.00 0.00 3.10
556 557 0.457166 CATGCATGCAAGACAACCGG 60.457 55.000 26.68 0.00 0.00 5.28
579 588 1.410737 CGTGATAACCGTGCGTCCAG 61.411 60.000 0.00 0.00 0.00 3.86
581 590 0.733566 TTCGTGATAACCGTGCGTCC 60.734 55.000 0.00 0.00 0.00 4.79
689 710 1.081376 CACGGTGAGTGGACTCGAC 60.081 63.158 0.74 2.49 46.77 4.20
748 779 7.607991 CCACATGTGAAGGAGTACTATCTTTTT 59.392 37.037 27.46 0.00 0.00 1.94
749 780 7.106239 CCACATGTGAAGGAGTACTATCTTTT 58.894 38.462 27.46 0.00 0.00 2.27
750 781 6.213600 ACCACATGTGAAGGAGTACTATCTTT 59.786 38.462 27.46 0.00 0.00 2.52
751 782 5.721960 ACCACATGTGAAGGAGTACTATCTT 59.278 40.000 27.46 9.83 0.00 2.40
752 783 5.273208 ACCACATGTGAAGGAGTACTATCT 58.727 41.667 27.46 0.00 0.00 1.98
753 784 5.599999 ACCACATGTGAAGGAGTACTATC 57.400 43.478 27.46 0.00 0.00 2.08
754 785 5.734720 CAACCACATGTGAAGGAGTACTAT 58.265 41.667 27.46 0.00 0.00 2.12
755 786 4.562757 GCAACCACATGTGAAGGAGTACTA 60.563 45.833 27.46 0.00 0.00 1.82
756 787 3.807209 GCAACCACATGTGAAGGAGTACT 60.807 47.826 27.46 0.00 0.00 2.73
757 788 2.484264 GCAACCACATGTGAAGGAGTAC 59.516 50.000 27.46 8.12 0.00 2.73
894 3301 2.742053 GTCGCTAGCCAACAGATTTTGA 59.258 45.455 9.66 0.00 0.00 2.69
895 3302 2.483877 TGTCGCTAGCCAACAGATTTTG 59.516 45.455 9.66 0.00 0.00 2.44
896 3303 2.744202 CTGTCGCTAGCCAACAGATTTT 59.256 45.455 28.54 0.00 42.37 1.82
897 3304 2.028112 TCTGTCGCTAGCCAACAGATTT 60.028 45.455 29.93 0.00 43.25 2.17
898 3305 1.550524 TCTGTCGCTAGCCAACAGATT 59.449 47.619 29.93 0.00 43.25 2.40
899 3306 1.186200 TCTGTCGCTAGCCAACAGAT 58.814 50.000 29.93 0.00 43.25 2.90
900 3307 0.243907 GTCTGTCGCTAGCCAACAGA 59.756 55.000 29.93 29.93 45.26 3.41
901 3308 0.737715 GGTCTGTCGCTAGCCAACAG 60.738 60.000 27.37 27.37 41.38 3.16
902 3309 1.292223 GGTCTGTCGCTAGCCAACA 59.708 57.895 9.66 12.83 0.00 3.33
903 3310 1.805945 CGGTCTGTCGCTAGCCAAC 60.806 63.158 9.66 8.54 0.00 3.77
904 3311 2.209064 GACGGTCTGTCGCTAGCCAA 62.209 60.000 9.66 0.00 37.96 4.52
905 3312 2.675423 ACGGTCTGTCGCTAGCCA 60.675 61.111 9.66 0.83 0.00 4.75
906 3313 2.102553 GACGGTCTGTCGCTAGCC 59.897 66.667 9.66 0.00 37.96 3.93
914 3321 2.581208 TTTGGCACGTGACGGTCTGT 62.581 55.000 22.23 5.30 0.00 3.41
1125 3781 2.270205 CTGGCGAAGGAGGCACAT 59.730 61.111 0.00 0.00 41.94 3.21
1309 3965 3.152400 GTCCGGGTAGGTGGCGAT 61.152 66.667 0.00 0.00 41.99 4.58
1694 4350 2.413765 CGAAGTAGAGGCCGAGGC 59.586 66.667 5.37 5.37 41.06 4.70
1981 4637 4.335584 CCTCTCCTCGATCGCCGC 62.336 72.222 11.09 0.00 38.37 6.53
2128 4784 2.356535 GGAAGAAGACTGTGCCCATGAT 60.357 50.000 0.00 0.00 0.00 2.45
2135 4791 0.957888 GCAGGGGAAGAAGACTGTGC 60.958 60.000 0.00 0.00 33.62 4.57
2229 4885 2.975799 GCAACAAACGCCCCGAGA 60.976 61.111 0.00 0.00 0.00 4.04
2247 4903 2.639839 AGAAGTGTAGGTGCCAGTGATT 59.360 45.455 0.00 0.00 0.00 2.57
2292 7351 8.265055 CACACCTAAAAGGATGGAGTATCTTAA 58.735 37.037 0.00 0.00 37.67 1.85
2296 7355 4.816925 GCACACCTAAAAGGATGGAGTATC 59.183 45.833 0.00 0.00 37.67 2.24
2298 7357 3.844211 AGCACACCTAAAAGGATGGAGTA 59.156 43.478 0.00 0.00 37.67 2.59
2300 7359 3.356529 AGCACACCTAAAAGGATGGAG 57.643 47.619 0.00 0.00 37.67 3.86
2301 7360 3.370527 GCTAGCACACCTAAAAGGATGGA 60.371 47.826 10.63 0.00 37.67 3.41
2302 7361 2.945668 GCTAGCACACCTAAAAGGATGG 59.054 50.000 10.63 0.00 37.67 3.51
2314 7919 7.534085 TTGTTTGTAGTATATGCTAGCACAC 57.466 36.000 22.07 17.67 0.00 3.82
2329 10649 5.406649 TCACTTGGCTTGTTTTGTTTGTAG 58.593 37.500 0.00 0.00 0.00 2.74
2358 10678 8.064336 ACGTCTTACACAGAGGAAGTATAAAT 57.936 34.615 0.00 0.00 39.43 1.40
2360 10680 7.458409 AACGTCTTACACAGAGGAAGTATAA 57.542 36.000 0.00 0.00 39.43 0.98
2361 10681 7.458409 AAACGTCTTACACAGAGGAAGTATA 57.542 36.000 0.00 0.00 39.43 1.47
2362 10682 5.979288 AACGTCTTACACAGAGGAAGTAT 57.021 39.130 0.00 0.00 39.43 2.12
2363 10683 5.779529 AAACGTCTTACACAGAGGAAGTA 57.220 39.130 0.00 0.00 39.43 2.24
2364 10684 4.667519 AAACGTCTTACACAGAGGAAGT 57.332 40.909 0.00 0.00 39.43 3.01
2365 10685 5.753921 AGAAAAACGTCTTACACAGAGGAAG 59.246 40.000 0.00 0.00 39.43 3.46
2366 10686 5.522460 CAGAAAAACGTCTTACACAGAGGAA 59.478 40.000 0.00 0.00 39.43 3.36
2367 10687 5.047847 CAGAAAAACGTCTTACACAGAGGA 58.952 41.667 0.00 0.00 39.43 3.71
2368 10688 4.318831 GCAGAAAAACGTCTTACACAGAGG 60.319 45.833 0.00 0.00 42.30 3.69
2369 10689 4.270084 TGCAGAAAAACGTCTTACACAGAG 59.730 41.667 0.00 0.00 29.34 3.35
2370 10690 4.033587 GTGCAGAAAAACGTCTTACACAGA 59.966 41.667 0.00 0.00 34.45 3.41
2371 10691 4.034048 AGTGCAGAAAAACGTCTTACACAG 59.966 41.667 0.00 0.00 35.77 3.66
2372 10692 3.936453 AGTGCAGAAAAACGTCTTACACA 59.064 39.130 0.00 0.00 35.77 3.72
2373 10693 4.531659 AGTGCAGAAAAACGTCTTACAC 57.468 40.909 0.00 0.00 34.48 2.90
2374 10694 5.233476 CACTAGTGCAGAAAAACGTCTTACA 59.767 40.000 10.54 0.00 0.00 2.41
2375 10695 5.233689 ACACTAGTGCAGAAAAACGTCTTAC 59.766 40.000 22.90 0.00 0.00 2.34
2376 10696 5.353938 ACACTAGTGCAGAAAAACGTCTTA 58.646 37.500 22.90 0.00 0.00 2.10
2377 10697 4.189231 ACACTAGTGCAGAAAAACGTCTT 58.811 39.130 22.90 0.00 0.00 3.01
2378 10698 3.793559 ACACTAGTGCAGAAAAACGTCT 58.206 40.909 22.90 0.00 0.00 4.18
2379 10699 3.802685 AGACACTAGTGCAGAAAAACGTC 59.197 43.478 22.90 8.56 0.00 4.34
2380 10700 3.793559 AGACACTAGTGCAGAAAAACGT 58.206 40.909 22.90 0.00 0.00 3.99
2381 10701 4.051922 AGAGACACTAGTGCAGAAAAACG 58.948 43.478 22.90 0.00 0.00 3.60
2382 10702 4.811557 ACAGAGACACTAGTGCAGAAAAAC 59.188 41.667 22.90 6.12 0.00 2.43
2383 10703 5.023533 ACAGAGACACTAGTGCAGAAAAA 57.976 39.130 22.90 0.00 0.00 1.94
2384 10704 4.501571 GGACAGAGACACTAGTGCAGAAAA 60.502 45.833 22.90 0.00 0.00 2.29
2385 10705 3.005897 GGACAGAGACACTAGTGCAGAAA 59.994 47.826 22.90 0.00 0.00 2.52
2386 10706 2.558795 GGACAGAGACACTAGTGCAGAA 59.441 50.000 22.90 0.00 0.00 3.02
2387 10707 2.163509 GGACAGAGACACTAGTGCAGA 58.836 52.381 22.90 0.00 0.00 4.26
2388 10708 2.166829 AGGACAGAGACACTAGTGCAG 58.833 52.381 22.90 10.38 0.00 4.41
2389 10709 2.294449 AGGACAGAGACACTAGTGCA 57.706 50.000 22.90 0.00 0.00 4.57
2390 10710 3.349022 ACTAGGACAGAGACACTAGTGC 58.651 50.000 22.90 14.96 43.13 4.40
2392 10712 4.041815 TGACACTAGGACAGAGACACTAGT 59.958 45.833 0.00 0.00 44.99 2.57
2393 10713 4.580868 TGACACTAGGACAGAGACACTAG 58.419 47.826 0.00 0.00 39.00 2.57
2394 10714 4.635699 TGACACTAGGACAGAGACACTA 57.364 45.455 0.00 0.00 0.00 2.74
2395 10715 3.510531 TGACACTAGGACAGAGACACT 57.489 47.619 0.00 0.00 0.00 3.55
2396 10716 4.202121 TGTTTGACACTAGGACAGAGACAC 60.202 45.833 0.00 0.00 0.00 3.67
2397 10717 3.958147 TGTTTGACACTAGGACAGAGACA 59.042 43.478 0.00 0.00 0.00 3.41
2398 10718 4.585955 TGTTTGACACTAGGACAGAGAC 57.414 45.455 0.00 0.00 0.00 3.36
2399 10719 5.128827 ACTTTGTTTGACACTAGGACAGAGA 59.871 40.000 0.00 0.00 0.00 3.10
2400 10720 5.360591 ACTTTGTTTGACACTAGGACAGAG 58.639 41.667 0.00 0.00 0.00 3.35
2401 10721 5.128827 AGACTTTGTTTGACACTAGGACAGA 59.871 40.000 0.00 0.00 0.00 3.41
2402 10722 5.360591 AGACTTTGTTTGACACTAGGACAG 58.639 41.667 0.00 0.00 0.00 3.51
2403 10723 5.353394 AGACTTTGTTTGACACTAGGACA 57.647 39.130 0.00 0.00 0.00 4.02
2404 10724 6.759827 TGTAAGACTTTGTTTGACACTAGGAC 59.240 38.462 0.00 0.00 0.00 3.85
2405 10725 6.880484 TGTAAGACTTTGTTTGACACTAGGA 58.120 36.000 0.00 0.00 0.00 2.94
2406 10726 7.730364 ATGTAAGACTTTGTTTGACACTAGG 57.270 36.000 0.00 0.00 0.00 3.02
2409 10729 8.567948 CCATAATGTAAGACTTTGTTTGACACT 58.432 33.333 0.00 0.00 0.00 3.55
2410 10730 7.807907 CCCATAATGTAAGACTTTGTTTGACAC 59.192 37.037 0.00 0.00 0.00 3.67
2411 10731 7.721842 TCCCATAATGTAAGACTTTGTTTGACA 59.278 33.333 0.00 0.00 0.00 3.58
2412 10732 8.021396 GTCCCATAATGTAAGACTTTGTTTGAC 58.979 37.037 0.00 0.00 0.00 3.18
2413 10733 7.094975 CGTCCCATAATGTAAGACTTTGTTTGA 60.095 37.037 0.00 0.00 0.00 2.69
2414 10734 7.021196 CGTCCCATAATGTAAGACTTTGTTTG 58.979 38.462 0.00 0.00 0.00 2.93
2415 10735 6.938030 TCGTCCCATAATGTAAGACTTTGTTT 59.062 34.615 0.00 0.00 0.00 2.83
2416 10736 6.469410 TCGTCCCATAATGTAAGACTTTGTT 58.531 36.000 0.00 0.00 0.00 2.83
2417 10737 6.045072 TCGTCCCATAATGTAAGACTTTGT 57.955 37.500 0.00 0.00 0.00 2.83
2418 10738 6.037172 CCTTCGTCCCATAATGTAAGACTTTG 59.963 42.308 0.00 0.00 0.00 2.77
2419 10739 6.070424 TCCTTCGTCCCATAATGTAAGACTTT 60.070 38.462 0.00 0.00 0.00 2.66
2420 10740 5.424252 TCCTTCGTCCCATAATGTAAGACTT 59.576 40.000 0.00 0.00 0.00 3.01
2421 10741 4.960469 TCCTTCGTCCCATAATGTAAGACT 59.040 41.667 0.00 0.00 0.00 3.24
2422 10742 5.272283 TCCTTCGTCCCATAATGTAAGAC 57.728 43.478 0.00 0.00 0.00 3.01
2423 10743 5.943349 TTCCTTCGTCCCATAATGTAAGA 57.057 39.130 0.00 0.00 0.00 2.10
2424 10744 7.931948 ACTATTTCCTTCGTCCCATAATGTAAG 59.068 37.037 0.00 0.00 0.00 2.34
2425 10745 7.798071 ACTATTTCCTTCGTCCCATAATGTAA 58.202 34.615 0.00 0.00 0.00 2.41
2426 10746 7.369551 ACTATTTCCTTCGTCCCATAATGTA 57.630 36.000 0.00 0.00 0.00 2.29
2427 10747 6.248569 ACTATTTCCTTCGTCCCATAATGT 57.751 37.500 0.00 0.00 0.00 2.71
2428 10748 8.671384 TTTACTATTTCCTTCGTCCCATAATG 57.329 34.615 0.00 0.00 0.00 1.90
2431 10751 9.991906 CTTATTTACTATTTCCTTCGTCCCATA 57.008 33.333 0.00 0.00 0.00 2.74
2432 10752 8.711170 TCTTATTTACTATTTCCTTCGTCCCAT 58.289 33.333 0.00 0.00 0.00 4.00
2433 10753 8.081517 TCTTATTTACTATTTCCTTCGTCCCA 57.918 34.615 0.00 0.00 0.00 4.37
2504 11210 1.265635 CTCGTGAAGAGCTATCTCCGG 59.734 57.143 0.00 0.00 40.54 5.14
2512 11218 0.743688 ATGCGATCTCGTGAAGAGCT 59.256 50.000 1.14 0.00 46.44 4.09
2520 11226 2.165234 CTCCCATGATATGCGATCTCGT 59.835 50.000 0.00 0.00 42.22 4.18
2530 11236 7.459125 TCCAAGTAAATCTAGCTCCCATGATAT 59.541 37.037 0.00 0.00 0.00 1.63
2531 11237 6.787458 TCCAAGTAAATCTAGCTCCCATGATA 59.213 38.462 0.00 0.00 0.00 2.15
2533 11239 4.968719 TCCAAGTAAATCTAGCTCCCATGA 59.031 41.667 0.00 0.00 0.00 3.07
2534 11240 5.059833 GTCCAAGTAAATCTAGCTCCCATG 58.940 45.833 0.00 0.00 0.00 3.66
2535 11241 4.971924 AGTCCAAGTAAATCTAGCTCCCAT 59.028 41.667 0.00 0.00 0.00 4.00
2546 11252 9.959721 TTGAGCTCTTTATTAGTCCAAGTAAAT 57.040 29.630 16.19 0.00 0.00 1.40
2602 11308 0.542333 TCCCACTGAACGGACACAAA 59.458 50.000 0.00 0.00 0.00 2.83
2632 11338 1.001268 CGCCTTTAGAGAGCATAGCGA 60.001 52.381 0.00 0.00 44.75 4.93
2783 11493 0.251165 GCTGCCTTCACCCACCTAAA 60.251 55.000 0.00 0.00 0.00 1.85
2809 11519 2.205152 ACAGAACACCCTACGCGGT 61.205 57.895 12.47 0.00 36.18 5.68
2833 11543 3.573110 TGTCACAATGATGCCAAATGTCA 59.427 39.130 0.00 0.00 0.00 3.58
2871 11581 3.264052 TCCCCCACCCACACATGG 61.264 66.667 0.00 0.00 46.81 3.66
2890 11600 1.610379 AAGCACCAAGATTGCCCCC 60.610 57.895 0.00 0.00 41.18 5.40
2933 11808 2.539338 GGCCAACGTCGCTGACAAA 61.539 57.895 0.00 0.00 32.09 2.83
3057 11938 3.532542 CTTCTAAGGGACAATTCCGACC 58.467 50.000 0.00 0.00 43.94 4.79
3070 11951 1.492764 TTAGCGTCCCCCTTCTAAGG 58.507 55.000 1.47 1.47 46.06 2.69
3258 12139 3.402110 TGCTACTGGCCAATAATCATCG 58.598 45.455 7.01 0.00 40.92 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.