Multiple sequence alignment - TraesCS4B01G284800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G284800 chr4B 100.000 3617 0 0 1 3617 568429097 568425481 0.000000e+00 6680
1 TraesCS4B01G284800 chr4D 92.641 3071 159 20 352 3406 455341064 455338045 0.000000e+00 4357
2 TraesCS4B01G284800 chr4A 93.596 2155 108 15 703 2836 12598567 12600712 0.000000e+00 3188
3 TraesCS4B01G284800 chr4A 88.963 598 54 8 2819 3413 12602191 12602779 0.000000e+00 728
4 TraesCS4B01G284800 chr4A 88.636 88 6 4 3459 3542 683892289 683892376 1.780000e-18 104
5 TraesCS4B01G284800 chr4A 89.286 84 5 4 3476 3558 27672271 27672191 6.390000e-18 102
6 TraesCS4B01G284800 chr6B 87.795 254 27 4 1384 1636 276226780 276226530 9.820000e-76 294
7 TraesCS4B01G284800 chr6B 84.643 280 39 2 1259 1538 702686691 702686966 3.560000e-70 276
8 TraesCS4B01G284800 chr6B 92.308 78 3 3 3467 3542 166122014 166121938 1.370000e-19 108
9 TraesCS4B01G284800 chr6D 86.624 157 21 0 1316 1472 151763880 151763724 1.330000e-39 174
10 TraesCS4B01G284800 chr1A 97.101 69 2 0 3474 3542 82521822 82521890 2.280000e-22 117
11 TraesCS4B01G284800 chr3D 97.015 67 2 0 3476 3542 401175273 401175207 2.950000e-21 113
12 TraesCS4B01G284800 chr3D 94.444 72 4 0 3476 3547 372621409 372621338 1.060000e-20 111
13 TraesCS4B01G284800 chr7D 94.444 72 3 1 3476 3547 56621187 56621117 3.820000e-20 110
14 TraesCS4B01G284800 chr3A 95.522 67 3 0 3476 3542 530193604 530193670 1.370000e-19 108
15 TraesCS4B01G284800 chr2D 92.208 77 4 2 3476 3550 612539897 612539821 1.370000e-19 108


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G284800 chr4B 568425481 568429097 3616 True 6680 6680 100.0000 1 3617 1 chr4B.!!$R1 3616
1 TraesCS4B01G284800 chr4D 455338045 455341064 3019 True 4357 4357 92.6410 352 3406 1 chr4D.!!$R1 3054
2 TraesCS4B01G284800 chr4A 12598567 12602779 4212 False 1958 3188 91.2795 703 3413 2 chr4A.!!$F2 2710

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
746 749 0.034670 AGCCATTCTGCCAGTCCTTC 60.035 55.0 0.0 0.0 0.00 3.46 F
1589 1604 0.250209 CTGATGATCTCCAAGGCGGG 60.250 60.0 0.0 0.0 34.36 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1855 1870 0.388649 ACGTCGAGCACCTTCATGAC 60.389 55.0 0.0 0.0 0.0 3.06 R
3488 5034 0.106967 GCAGGGTCAAGGGAAGGATC 60.107 60.0 0.0 0.0 0.0 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 0.036294 AGCGGTAAGGAGGTTTGAGC 60.036 55.000 0.00 0.00 0.00 4.26
21 22 1.359459 GCGGTAAGGAGGTTTGAGCG 61.359 60.000 0.00 0.00 0.00 5.03
22 23 0.245539 CGGTAAGGAGGTTTGAGCGA 59.754 55.000 0.00 0.00 33.07 4.93
23 24 1.736032 CGGTAAGGAGGTTTGAGCGAG 60.736 57.143 0.00 0.00 33.07 5.03
24 25 1.405661 GGTAAGGAGGTTTGAGCGAGG 60.406 57.143 0.00 0.00 0.00 4.63
25 26 1.275573 GTAAGGAGGTTTGAGCGAGGT 59.724 52.381 0.00 0.00 0.00 3.85
26 27 0.321996 AAGGAGGTTTGAGCGAGGTC 59.678 55.000 0.00 0.00 0.00 3.85
27 28 1.446272 GGAGGTTTGAGCGAGGTCG 60.446 63.158 0.00 0.00 43.27 4.79
37 38 3.786101 CGAGGTCGCAATGAGTGG 58.214 61.111 0.00 0.00 0.00 4.00
38 39 1.079819 CGAGGTCGCAATGAGTGGT 60.080 57.895 0.00 0.00 0.00 4.16
39 40 0.670546 CGAGGTCGCAATGAGTGGTT 60.671 55.000 0.00 0.00 0.00 3.67
40 41 1.523758 GAGGTCGCAATGAGTGGTTT 58.476 50.000 0.00 0.00 0.00 3.27
41 42 1.880027 GAGGTCGCAATGAGTGGTTTT 59.120 47.619 0.00 0.00 0.00 2.43
42 43 2.293399 GAGGTCGCAATGAGTGGTTTTT 59.707 45.455 0.00 0.00 0.00 1.94
43 44 2.034558 AGGTCGCAATGAGTGGTTTTTG 59.965 45.455 0.00 0.00 0.00 2.44
44 45 2.223711 GGTCGCAATGAGTGGTTTTTGT 60.224 45.455 0.00 0.00 0.00 2.83
45 46 3.443976 GTCGCAATGAGTGGTTTTTGTT 58.556 40.909 0.00 0.00 0.00 2.83
46 47 3.862845 GTCGCAATGAGTGGTTTTTGTTT 59.137 39.130 0.00 0.00 0.00 2.83
47 48 3.862267 TCGCAATGAGTGGTTTTTGTTTG 59.138 39.130 0.00 0.00 0.00 2.93
48 49 3.616379 CGCAATGAGTGGTTTTTGTTTGT 59.384 39.130 0.00 0.00 0.00 2.83
49 50 4.092675 CGCAATGAGTGGTTTTTGTTTGTT 59.907 37.500 0.00 0.00 0.00 2.83
50 51 5.559227 GCAATGAGTGGTTTTTGTTTGTTC 58.441 37.500 0.00 0.00 0.00 3.18
51 52 5.447144 GCAATGAGTGGTTTTTGTTTGTTCC 60.447 40.000 0.00 0.00 0.00 3.62
52 53 5.675684 ATGAGTGGTTTTTGTTTGTTCCT 57.324 34.783 0.00 0.00 0.00 3.36
53 54 4.815269 TGAGTGGTTTTTGTTTGTTCCTG 58.185 39.130 0.00 0.00 0.00 3.86
54 55 4.282195 TGAGTGGTTTTTGTTTGTTCCTGT 59.718 37.500 0.00 0.00 0.00 4.00
55 56 5.221541 TGAGTGGTTTTTGTTTGTTCCTGTT 60.222 36.000 0.00 0.00 0.00 3.16
56 57 4.994217 AGTGGTTTTTGTTTGTTCCTGTTG 59.006 37.500 0.00 0.00 0.00 3.33
57 58 4.991687 GTGGTTTTTGTTTGTTCCTGTTGA 59.008 37.500 0.00 0.00 0.00 3.18
58 59 5.641636 GTGGTTTTTGTTTGTTCCTGTTGAT 59.358 36.000 0.00 0.00 0.00 2.57
59 60 5.872070 TGGTTTTTGTTTGTTCCTGTTGATC 59.128 36.000 0.00 0.00 0.00 2.92
60 61 5.005299 GGTTTTTGTTTGTTCCTGTTGATCG 59.995 40.000 0.00 0.00 0.00 3.69
61 62 4.974368 TTTGTTTGTTCCTGTTGATCGT 57.026 36.364 0.00 0.00 0.00 3.73
62 63 4.545823 TTGTTTGTTCCTGTTGATCGTC 57.454 40.909 0.00 0.00 0.00 4.20
63 64 3.804036 TGTTTGTTCCTGTTGATCGTCT 58.196 40.909 0.00 0.00 0.00 4.18
64 65 4.951254 TGTTTGTTCCTGTTGATCGTCTA 58.049 39.130 0.00 0.00 0.00 2.59
65 66 4.748102 TGTTTGTTCCTGTTGATCGTCTAC 59.252 41.667 0.00 0.00 0.00 2.59
66 67 4.866508 TTGTTCCTGTTGATCGTCTACT 57.133 40.909 0.00 0.00 0.00 2.57
67 68 5.970317 TTGTTCCTGTTGATCGTCTACTA 57.030 39.130 0.00 0.00 0.00 1.82
68 69 5.970317 TGTTCCTGTTGATCGTCTACTAA 57.030 39.130 0.00 0.00 0.00 2.24
69 70 6.335471 TGTTCCTGTTGATCGTCTACTAAA 57.665 37.500 0.00 0.00 0.00 1.85
70 71 6.154445 TGTTCCTGTTGATCGTCTACTAAAC 58.846 40.000 0.00 0.00 0.00 2.01
71 72 6.015688 TGTTCCTGTTGATCGTCTACTAAACT 60.016 38.462 0.00 0.00 0.00 2.66
72 73 6.585695 TCCTGTTGATCGTCTACTAAACTT 57.414 37.500 0.00 0.00 0.00 2.66
73 74 6.387465 TCCTGTTGATCGTCTACTAAACTTG 58.613 40.000 0.00 0.00 0.00 3.16
74 75 6.015688 TCCTGTTGATCGTCTACTAAACTTGT 60.016 38.462 0.00 0.00 0.00 3.16
75 76 7.175467 TCCTGTTGATCGTCTACTAAACTTGTA 59.825 37.037 0.00 0.00 0.00 2.41
76 77 7.272948 CCTGTTGATCGTCTACTAAACTTGTAC 59.727 40.741 0.00 0.00 0.00 2.90
77 78 7.879070 TGTTGATCGTCTACTAAACTTGTACT 58.121 34.615 0.00 0.00 0.00 2.73
78 79 9.002600 TGTTGATCGTCTACTAAACTTGTACTA 57.997 33.333 0.00 0.00 0.00 1.82
79 80 9.271738 GTTGATCGTCTACTAAACTTGTACTAC 57.728 37.037 0.00 0.00 0.00 2.73
80 81 8.783833 TGATCGTCTACTAAACTTGTACTACT 57.216 34.615 0.00 0.00 0.00 2.57
81 82 9.224267 TGATCGTCTACTAAACTTGTACTACTT 57.776 33.333 0.00 0.00 0.00 2.24
108 109 9.539825 AATAGACTTGATTGTAGCTCTATGTTG 57.460 33.333 0.00 0.00 0.00 3.33
109 110 6.940739 AGACTTGATTGTAGCTCTATGTTGT 58.059 36.000 0.00 0.00 0.00 3.32
110 111 7.390027 AGACTTGATTGTAGCTCTATGTTGTT 58.610 34.615 0.00 0.00 0.00 2.83
111 112 7.880195 AGACTTGATTGTAGCTCTATGTTGTTT 59.120 33.333 0.00 0.00 0.00 2.83
112 113 7.810658 ACTTGATTGTAGCTCTATGTTGTTTG 58.189 34.615 0.00 0.00 0.00 2.93
113 114 7.445402 ACTTGATTGTAGCTCTATGTTGTTTGT 59.555 33.333 0.00 0.00 0.00 2.83
114 115 7.364522 TGATTGTAGCTCTATGTTGTTTGTC 57.635 36.000 0.00 0.00 0.00 3.18
115 116 7.161404 TGATTGTAGCTCTATGTTGTTTGTCT 58.839 34.615 0.00 0.00 0.00 3.41
116 117 7.661437 TGATTGTAGCTCTATGTTGTTTGTCTT 59.339 33.333 0.00 0.00 0.00 3.01
117 118 6.785488 TGTAGCTCTATGTTGTTTGTCTTG 57.215 37.500 0.00 0.00 0.00 3.02
118 119 6.288294 TGTAGCTCTATGTTGTTTGTCTTGT 58.712 36.000 0.00 0.00 0.00 3.16
119 120 6.765989 TGTAGCTCTATGTTGTTTGTCTTGTT 59.234 34.615 0.00 0.00 0.00 2.83
120 121 6.699575 AGCTCTATGTTGTTTGTCTTGTTT 57.300 33.333 0.00 0.00 0.00 2.83
121 122 6.729187 AGCTCTATGTTGTTTGTCTTGTTTC 58.271 36.000 0.00 0.00 0.00 2.78
122 123 6.318648 AGCTCTATGTTGTTTGTCTTGTTTCA 59.681 34.615 0.00 0.00 0.00 2.69
123 124 7.013655 AGCTCTATGTTGTTTGTCTTGTTTCAT 59.986 33.333 0.00 0.00 0.00 2.57
124 125 7.324616 GCTCTATGTTGTTTGTCTTGTTTCATC 59.675 37.037 0.00 0.00 0.00 2.92
125 126 7.351981 TCTATGTTGTTTGTCTTGTTTCATCG 58.648 34.615 0.00 0.00 0.00 3.84
126 127 5.303747 TGTTGTTTGTCTTGTTTCATCGT 57.696 34.783 0.00 0.00 0.00 3.73
127 128 5.092105 TGTTGTTTGTCTTGTTTCATCGTG 58.908 37.500 0.00 0.00 0.00 4.35
128 129 4.285807 TGTTTGTCTTGTTTCATCGTGG 57.714 40.909 0.00 0.00 0.00 4.94
129 130 3.692101 TGTTTGTCTTGTTTCATCGTGGT 59.308 39.130 0.00 0.00 0.00 4.16
130 131 3.961477 TTGTCTTGTTTCATCGTGGTG 57.039 42.857 0.00 0.00 0.00 4.17
131 132 2.217750 TGTCTTGTTTCATCGTGGTGG 58.782 47.619 0.00 0.00 0.00 4.61
132 133 2.218603 GTCTTGTTTCATCGTGGTGGT 58.781 47.619 0.00 0.00 0.00 4.16
133 134 2.032030 GTCTTGTTTCATCGTGGTGGTG 60.032 50.000 0.00 0.00 0.00 4.17
134 135 2.158885 TCTTGTTTCATCGTGGTGGTGA 60.159 45.455 0.00 0.00 0.00 4.02
135 136 1.588674 TGTTTCATCGTGGTGGTGAC 58.411 50.000 0.00 0.00 0.00 3.67
136 137 1.134371 TGTTTCATCGTGGTGGTGACA 60.134 47.619 0.00 0.00 38.70 3.58
137 138 1.944024 GTTTCATCGTGGTGGTGACAA 59.056 47.619 0.00 0.00 46.06 3.18
138 139 2.552315 GTTTCATCGTGGTGGTGACAAT 59.448 45.455 0.00 0.00 46.06 2.71
139 140 2.559698 TCATCGTGGTGGTGACAATT 57.440 45.000 0.00 0.00 46.06 2.32
140 141 2.422597 TCATCGTGGTGGTGACAATTC 58.577 47.619 0.00 0.00 46.06 2.17
141 142 1.468520 CATCGTGGTGGTGACAATTCC 59.531 52.381 0.00 0.00 46.06 3.01
142 143 0.250553 TCGTGGTGGTGACAATTCCC 60.251 55.000 0.00 0.00 46.06 3.97
143 144 0.250727 CGTGGTGGTGACAATTCCCT 60.251 55.000 0.00 0.00 46.06 4.20
144 145 1.247567 GTGGTGGTGACAATTCCCTG 58.752 55.000 0.00 0.00 46.06 4.45
145 146 0.850100 TGGTGGTGACAATTCCCTGT 59.150 50.000 0.00 0.00 46.06 4.00
146 147 1.247567 GGTGGTGACAATTCCCTGTG 58.752 55.000 0.00 0.00 46.06 3.66
147 148 1.202879 GGTGGTGACAATTCCCTGTGA 60.203 52.381 0.00 0.00 46.06 3.58
148 149 2.555227 GGTGGTGACAATTCCCTGTGAT 60.555 50.000 0.00 0.00 46.06 3.06
149 150 2.489329 GTGGTGACAATTCCCTGTGATG 59.511 50.000 0.00 0.00 46.06 3.07
150 151 2.094675 GGTGACAATTCCCTGTGATGG 58.905 52.381 0.00 0.00 0.00 3.51
151 152 5.720144 TGGTGACAATTCCCTGTGATGGG 62.720 52.174 0.00 0.00 43.07 4.00
159 160 4.415150 CTGTGATGGGGTGCGCCT 62.415 66.667 17.49 0.00 34.45 5.52
160 161 4.720902 TGTGATGGGGTGCGCCTG 62.721 66.667 17.49 0.00 34.45 4.85
171 172 4.840005 GCGCCTGCTGGGGTAGTC 62.840 72.222 24.45 7.30 46.69 2.59
172 173 4.514577 CGCCTGCTGGGGTAGTCG 62.515 72.222 17.33 4.77 40.91 4.18
173 174 3.391382 GCCTGCTGGGGTAGTCGT 61.391 66.667 12.06 0.00 35.12 4.34
174 175 2.893398 CCTGCTGGGGTAGTCGTC 59.107 66.667 0.71 0.00 0.00 4.20
175 176 2.490217 CTGCTGGGGTAGTCGTCG 59.510 66.667 0.00 0.00 0.00 5.12
176 177 2.282674 TGCTGGGGTAGTCGTCGT 60.283 61.111 0.00 0.00 0.00 4.34
177 178 1.874345 CTGCTGGGGTAGTCGTCGTT 61.874 60.000 0.00 0.00 0.00 3.85
178 179 0.608856 TGCTGGGGTAGTCGTCGTTA 60.609 55.000 0.00 0.00 0.00 3.18
179 180 0.743097 GCTGGGGTAGTCGTCGTTAT 59.257 55.000 0.00 0.00 0.00 1.89
180 181 1.535437 GCTGGGGTAGTCGTCGTTATG 60.535 57.143 0.00 0.00 0.00 1.90
181 182 0.457035 TGGGGTAGTCGTCGTTATGC 59.543 55.000 0.00 0.00 0.00 3.14
182 183 0.457035 GGGGTAGTCGTCGTTATGCA 59.543 55.000 0.00 0.00 0.00 3.96
183 184 1.068127 GGGGTAGTCGTCGTTATGCAT 59.932 52.381 3.79 3.79 0.00 3.96
184 185 2.124903 GGGTAGTCGTCGTTATGCATG 58.875 52.381 10.16 0.00 0.00 4.06
185 186 2.480759 GGGTAGTCGTCGTTATGCATGT 60.481 50.000 10.16 0.00 0.00 3.21
186 187 3.184541 GGTAGTCGTCGTTATGCATGTT 58.815 45.455 10.16 0.00 0.00 2.71
187 188 3.615496 GGTAGTCGTCGTTATGCATGTTT 59.385 43.478 10.16 0.00 0.00 2.83
188 189 3.991605 AGTCGTCGTTATGCATGTTTC 57.008 42.857 10.16 0.00 0.00 2.78
189 190 2.344441 AGTCGTCGTTATGCATGTTTCG 59.656 45.455 10.16 8.67 0.00 3.46
190 191 2.343246 GTCGTCGTTATGCATGTTTCGA 59.657 45.455 10.16 10.84 0.00 3.71
191 192 3.000078 GTCGTCGTTATGCATGTTTCGAT 60.000 43.478 10.16 0.00 0.00 3.59
192 193 3.615056 TCGTCGTTATGCATGTTTCGATT 59.385 39.130 10.16 0.00 0.00 3.34
193 194 4.092237 TCGTCGTTATGCATGTTTCGATTT 59.908 37.500 10.16 0.00 0.00 2.17
194 195 4.786068 CGTCGTTATGCATGTTTCGATTTT 59.214 37.500 10.16 0.00 0.00 1.82
195 196 5.954922 CGTCGTTATGCATGTTTCGATTTTA 59.045 36.000 10.16 0.00 0.00 1.52
196 197 6.627276 CGTCGTTATGCATGTTTCGATTTTAT 59.373 34.615 10.16 0.00 0.00 1.40
197 198 7.790216 CGTCGTTATGCATGTTTCGATTTTATA 59.210 33.333 10.16 0.00 0.00 0.98
198 199 9.092322 GTCGTTATGCATGTTTCGATTTTATAG 57.908 33.333 10.16 0.00 0.00 1.31
199 200 8.822855 TCGTTATGCATGTTTCGATTTTATAGT 58.177 29.630 10.16 0.00 0.00 2.12
200 201 9.092322 CGTTATGCATGTTTCGATTTTATAGTC 57.908 33.333 10.16 0.00 0.00 2.59
203 204 6.486248 TGCATGTTTCGATTTTATAGTCTGC 58.514 36.000 0.00 0.00 0.00 4.26
204 205 6.316140 TGCATGTTTCGATTTTATAGTCTGCT 59.684 34.615 0.00 0.00 0.00 4.24
205 206 6.848296 GCATGTTTCGATTTTATAGTCTGCTC 59.152 38.462 0.00 0.00 0.00 4.26
206 207 6.903883 TGTTTCGATTTTATAGTCTGCTCC 57.096 37.500 0.00 0.00 0.00 4.70
207 208 6.403049 TGTTTCGATTTTATAGTCTGCTCCA 58.597 36.000 0.00 0.00 0.00 3.86
208 209 6.535150 TGTTTCGATTTTATAGTCTGCTCCAG 59.465 38.462 0.00 0.00 0.00 3.86
209 210 5.854010 TCGATTTTATAGTCTGCTCCAGT 57.146 39.130 0.00 0.00 32.61 4.00
210 211 6.954487 TCGATTTTATAGTCTGCTCCAGTA 57.046 37.500 0.00 0.00 32.61 2.74
211 212 6.971602 TCGATTTTATAGTCTGCTCCAGTAG 58.028 40.000 0.00 0.00 32.61 2.57
212 213 6.546403 TCGATTTTATAGTCTGCTCCAGTAGT 59.454 38.462 0.00 0.00 32.61 2.73
213 214 7.718314 TCGATTTTATAGTCTGCTCCAGTAGTA 59.282 37.037 0.00 0.00 32.61 1.82
214 215 8.018520 CGATTTTATAGTCTGCTCCAGTAGTAG 58.981 40.741 0.00 0.00 39.16 2.57
215 216 8.770010 ATTTTATAGTCTGCTCCAGTAGTAGT 57.230 34.615 0.00 0.00 38.90 2.73
216 217 8.591114 TTTTATAGTCTGCTCCAGTAGTAGTT 57.409 34.615 0.00 0.00 38.90 2.24
217 218 8.591114 TTTATAGTCTGCTCCAGTAGTAGTTT 57.409 34.615 0.00 0.00 38.90 2.66
218 219 4.792521 AGTCTGCTCCAGTAGTAGTTTG 57.207 45.455 0.00 0.00 38.90 2.93
219 220 3.511934 AGTCTGCTCCAGTAGTAGTTTGG 59.488 47.826 0.00 0.00 38.90 3.28
220 221 3.258622 GTCTGCTCCAGTAGTAGTTTGGT 59.741 47.826 1.92 0.00 38.90 3.67
221 222 3.510360 TCTGCTCCAGTAGTAGTTTGGTC 59.490 47.826 1.92 0.00 38.90 4.02
222 223 3.507411 TGCTCCAGTAGTAGTTTGGTCT 58.493 45.455 1.92 0.00 33.65 3.85
223 224 3.258372 TGCTCCAGTAGTAGTTTGGTCTG 59.742 47.826 1.92 0.00 33.65 3.51
224 225 3.258622 GCTCCAGTAGTAGTTTGGTCTGT 59.741 47.826 1.92 0.00 33.65 3.41
225 226 4.810790 CTCCAGTAGTAGTTTGGTCTGTG 58.189 47.826 1.92 0.00 33.65 3.66
226 227 3.576982 TCCAGTAGTAGTTTGGTCTGTGG 59.423 47.826 1.92 0.00 33.65 4.17
227 228 3.323979 CCAGTAGTAGTTTGGTCTGTGGT 59.676 47.826 0.00 0.00 0.00 4.16
228 229 4.557205 CAGTAGTAGTTTGGTCTGTGGTC 58.443 47.826 0.00 0.00 0.00 4.02
229 230 4.281182 CAGTAGTAGTTTGGTCTGTGGTCT 59.719 45.833 0.00 0.00 0.00 3.85
230 231 3.753294 AGTAGTTTGGTCTGTGGTCTG 57.247 47.619 0.00 0.00 0.00 3.51
231 232 2.368875 AGTAGTTTGGTCTGTGGTCTGG 59.631 50.000 0.00 0.00 0.00 3.86
232 233 0.474184 AGTTTGGTCTGTGGTCTGGG 59.526 55.000 0.00 0.00 0.00 4.45
233 234 0.182775 GTTTGGTCTGTGGTCTGGGT 59.817 55.000 0.00 0.00 0.00 4.51
234 235 0.472471 TTTGGTCTGTGGTCTGGGTC 59.528 55.000 0.00 0.00 0.00 4.46
235 236 1.415672 TTGGTCTGTGGTCTGGGTCC 61.416 60.000 0.00 0.00 0.00 4.46
236 237 1.536662 GGTCTGTGGTCTGGGTCCT 60.537 63.158 0.00 0.00 0.00 3.85
237 238 1.128188 GGTCTGTGGTCTGGGTCCTT 61.128 60.000 0.00 0.00 0.00 3.36
238 239 0.765510 GTCTGTGGTCTGGGTCCTTT 59.234 55.000 0.00 0.00 0.00 3.11
239 240 1.975680 GTCTGTGGTCTGGGTCCTTTA 59.024 52.381 0.00 0.00 0.00 1.85
240 241 2.370849 GTCTGTGGTCTGGGTCCTTTAA 59.629 50.000 0.00 0.00 0.00 1.52
241 242 3.050089 TCTGTGGTCTGGGTCCTTTAAA 58.950 45.455 0.00 0.00 0.00 1.52
242 243 3.460340 TCTGTGGTCTGGGTCCTTTAAAA 59.540 43.478 0.00 0.00 0.00 1.52
243 244 4.079672 TCTGTGGTCTGGGTCCTTTAAAAA 60.080 41.667 0.00 0.00 0.00 1.94
244 245 3.955551 TGTGGTCTGGGTCCTTTAAAAAC 59.044 43.478 0.00 0.00 0.00 2.43
245 246 4.212716 GTGGTCTGGGTCCTTTAAAAACT 58.787 43.478 0.00 0.00 0.00 2.66
246 247 4.037565 GTGGTCTGGGTCCTTTAAAAACTG 59.962 45.833 0.00 0.00 0.00 3.16
247 248 4.079672 TGGTCTGGGTCCTTTAAAAACTGA 60.080 41.667 0.00 0.00 0.00 3.41
248 249 4.277672 GGTCTGGGTCCTTTAAAAACTGAC 59.722 45.833 0.00 0.00 0.00 3.51
249 250 4.024302 GTCTGGGTCCTTTAAAAACTGACG 60.024 45.833 0.00 0.00 0.00 4.35
250 251 2.619646 TGGGTCCTTTAAAAACTGACGC 59.380 45.455 12.78 12.78 38.80 5.19
251 252 2.882761 GGGTCCTTTAAAAACTGACGCT 59.117 45.455 12.56 0.00 36.37 5.07
252 253 3.317149 GGGTCCTTTAAAAACTGACGCTT 59.683 43.478 12.56 0.00 36.37 4.68
253 254 4.516321 GGGTCCTTTAAAAACTGACGCTTA 59.484 41.667 12.56 0.00 36.37 3.09
254 255 5.182570 GGGTCCTTTAAAAACTGACGCTTAT 59.817 40.000 12.56 0.00 36.37 1.73
255 256 6.372381 GGGTCCTTTAAAAACTGACGCTTATA 59.628 38.462 12.56 0.00 36.37 0.98
256 257 7.239271 GGTCCTTTAAAAACTGACGCTTATAC 58.761 38.462 0.00 0.00 0.00 1.47
257 258 7.239271 GTCCTTTAAAAACTGACGCTTATACC 58.761 38.462 0.00 0.00 0.00 2.73
258 259 7.118825 GTCCTTTAAAAACTGACGCTTATACCT 59.881 37.037 0.00 0.00 0.00 3.08
259 260 7.332678 TCCTTTAAAAACTGACGCTTATACCTC 59.667 37.037 0.00 0.00 0.00 3.85
260 261 6.636666 TTAAAAACTGACGCTTATACCTCG 57.363 37.500 0.00 0.00 0.00 4.63
261 262 2.205307 AACTGACGCTTATACCTCGC 57.795 50.000 0.00 0.00 0.00 5.03
262 263 1.390565 ACTGACGCTTATACCTCGCT 58.609 50.000 0.00 0.00 0.00 4.93
263 264 1.749634 ACTGACGCTTATACCTCGCTT 59.250 47.619 0.00 0.00 0.00 4.68
264 265 2.165845 ACTGACGCTTATACCTCGCTTT 59.834 45.455 0.00 0.00 0.00 3.51
265 266 3.187700 CTGACGCTTATACCTCGCTTTT 58.812 45.455 0.00 0.00 0.00 2.27
266 267 3.592059 TGACGCTTATACCTCGCTTTTT 58.408 40.909 0.00 0.00 0.00 1.94
286 287 5.632244 TTTTTGAAACGGGCTTATACCTC 57.368 39.130 0.00 0.00 0.00 3.85
287 288 2.589798 TGAAACGGGCTTATACCTCG 57.410 50.000 0.00 0.00 0.00 4.63
288 289 1.215244 GAAACGGGCTTATACCTCGC 58.785 55.000 0.00 0.00 0.00 5.03
289 290 0.828677 AAACGGGCTTATACCTCGCT 59.171 50.000 0.00 0.00 0.00 4.93
290 291 0.828677 AACGGGCTTATACCTCGCTT 59.171 50.000 0.00 0.00 0.00 4.68
291 292 0.828677 ACGGGCTTATACCTCGCTTT 59.171 50.000 0.00 0.00 0.00 3.51
292 293 1.208776 ACGGGCTTATACCTCGCTTTT 59.791 47.619 0.00 0.00 0.00 2.27
293 294 1.597663 CGGGCTTATACCTCGCTTTTG 59.402 52.381 0.00 0.00 0.00 2.44
294 295 1.947456 GGGCTTATACCTCGCTTTTGG 59.053 52.381 0.00 0.00 0.00 3.28
295 296 2.640184 GGCTTATACCTCGCTTTTGGT 58.360 47.619 0.00 0.00 40.12 3.67
296 297 3.014623 GGCTTATACCTCGCTTTTGGTT 58.985 45.455 0.00 0.00 37.74 3.67
297 298 3.442625 GGCTTATACCTCGCTTTTGGTTT 59.557 43.478 0.00 0.00 37.74 3.27
298 299 4.082408 GGCTTATACCTCGCTTTTGGTTTT 60.082 41.667 0.00 0.00 37.74 2.43
299 300 5.093457 GCTTATACCTCGCTTTTGGTTTTC 58.907 41.667 0.00 0.00 37.74 2.29
300 301 5.632244 TTATACCTCGCTTTTGGTTTTCC 57.368 39.130 0.00 0.00 37.74 3.13
301 302 2.067365 ACCTCGCTTTTGGTTTTCCT 57.933 45.000 0.00 0.00 41.38 3.36
302 303 2.384828 ACCTCGCTTTTGGTTTTCCTT 58.615 42.857 0.00 0.00 41.38 3.36
303 304 3.558033 ACCTCGCTTTTGGTTTTCCTTA 58.442 40.909 0.00 0.00 41.38 2.69
304 305 3.955551 ACCTCGCTTTTGGTTTTCCTTAA 59.044 39.130 0.00 0.00 41.38 1.85
305 306 4.587262 ACCTCGCTTTTGGTTTTCCTTAAT 59.413 37.500 0.00 0.00 41.38 1.40
306 307 4.923281 CCTCGCTTTTGGTTTTCCTTAATG 59.077 41.667 0.00 0.00 41.38 1.90
307 308 5.278758 CCTCGCTTTTGGTTTTCCTTAATGA 60.279 40.000 0.00 0.00 41.38 2.57
308 309 6.150396 TCGCTTTTGGTTTTCCTTAATGAA 57.850 33.333 0.00 0.00 41.38 2.57
309 310 6.574350 TCGCTTTTGGTTTTCCTTAATGAAA 58.426 32.000 2.19 2.19 41.38 2.69
310 311 7.042335 TCGCTTTTGGTTTTCCTTAATGAAAA 58.958 30.769 12.83 12.83 40.82 2.29
311 312 7.713073 TCGCTTTTGGTTTTCCTTAATGAAAAT 59.287 29.630 17.90 0.00 43.78 1.82
312 313 8.983724 CGCTTTTGGTTTTCCTTAATGAAAATA 58.016 29.630 17.90 10.22 43.78 1.40
316 317 8.840833 TTGGTTTTCCTTAATGAAAATAAGCC 57.159 30.769 17.90 14.93 43.78 4.35
317 318 7.093992 TGGTTTTCCTTAATGAAAATAAGCCG 58.906 34.615 17.90 0.00 43.78 5.52
318 319 7.039644 TGGTTTTCCTTAATGAAAATAAGCCGA 60.040 33.333 17.90 4.03 43.78 5.54
319 320 7.815549 GGTTTTCCTTAATGAAAATAAGCCGAA 59.184 33.333 17.90 0.00 43.78 4.30
320 321 8.860128 GTTTTCCTTAATGAAAATAAGCCGAAG 58.140 33.333 17.90 0.00 43.78 3.79
321 322 7.931578 TTCCTTAATGAAAATAAGCCGAAGA 57.068 32.000 0.00 0.00 0.00 2.87
322 323 7.553881 TCCTTAATGAAAATAAGCCGAAGAG 57.446 36.000 0.00 0.00 0.00 2.85
323 324 6.542370 TCCTTAATGAAAATAAGCCGAAGAGG 59.458 38.462 0.00 0.00 44.97 3.69
324 325 6.238759 CCTTAATGAAAATAAGCCGAAGAGGG 60.239 42.308 0.00 0.00 41.48 4.30
325 326 3.992943 TGAAAATAAGCCGAAGAGGGA 57.007 42.857 0.00 0.00 41.48 4.20
326 327 4.295141 TGAAAATAAGCCGAAGAGGGAA 57.705 40.909 0.00 0.00 41.48 3.97
327 328 4.261801 TGAAAATAAGCCGAAGAGGGAAG 58.738 43.478 0.00 0.00 41.48 3.46
328 329 2.333688 AATAAGCCGAAGAGGGAAGC 57.666 50.000 0.00 0.00 41.48 3.86
329 330 0.470341 ATAAGCCGAAGAGGGAAGCC 59.530 55.000 0.00 0.00 41.48 4.35
330 331 1.623542 TAAGCCGAAGAGGGAAGCCC 61.624 60.000 0.00 0.00 45.90 5.19
343 344 3.366052 GGAAGCCCCACTTTGATTAGA 57.634 47.619 0.00 0.00 39.29 2.10
344 345 3.282885 GGAAGCCCCACTTTGATTAGAG 58.717 50.000 0.00 0.00 39.29 2.43
345 346 3.054361 GGAAGCCCCACTTTGATTAGAGA 60.054 47.826 0.00 0.00 39.29 3.10
346 347 4.567747 GGAAGCCCCACTTTGATTAGAGAA 60.568 45.833 0.00 0.00 39.29 2.87
347 348 4.657814 AGCCCCACTTTGATTAGAGAAA 57.342 40.909 0.00 0.00 0.00 2.52
348 349 4.998051 AGCCCCACTTTGATTAGAGAAAA 58.002 39.130 0.00 0.00 0.00 2.29
349 350 5.393866 AGCCCCACTTTGATTAGAGAAAAA 58.606 37.500 0.00 0.00 0.00 1.94
388 389 5.734498 GCTAGCAACAGAATTGTGTTAATCG 59.266 40.000 19.44 9.41 38.65 3.34
389 390 5.940192 AGCAACAGAATTGTGTTAATCGA 57.060 34.783 19.44 0.00 38.65 3.59
390 391 5.931532 AGCAACAGAATTGTGTTAATCGAG 58.068 37.500 19.44 8.43 38.65 4.04
391 392 5.700832 AGCAACAGAATTGTGTTAATCGAGA 59.299 36.000 19.44 0.00 38.65 4.04
392 393 6.017933 GCAACAGAATTGTGTTAATCGAGAG 58.982 40.000 19.44 7.13 38.65 3.20
393 394 6.347725 GCAACAGAATTGTGTTAATCGAGAGT 60.348 38.462 19.44 0.00 38.65 3.24
394 395 6.712241 ACAGAATTGTGTTAATCGAGAGTG 57.288 37.500 1.68 0.00 35.83 3.51
399 400 5.707242 TTGTGTTAATCGAGAGTGAGAGT 57.293 39.130 0.00 0.00 0.00 3.24
403 404 0.736053 AATCGAGAGTGAGAGTCGCC 59.264 55.000 0.00 0.00 33.66 5.54
413 414 3.686726 AGTGAGAGTCGCCATCATTTTTC 59.313 43.478 0.00 0.00 0.00 2.29
428 429 8.102676 CCATCATTTTTCCTAACCCTTTGATTT 58.897 33.333 0.00 0.00 0.00 2.17
499 500 3.640029 TCAGTTGGTTAGAGTTTCCGTCT 59.360 43.478 0.00 0.00 0.00 4.18
503 504 5.479375 AGTTGGTTAGAGTTTCCGTCTGATA 59.521 40.000 0.00 0.00 0.00 2.15
544 545 3.646932 TCCCATCGGGACCAATACT 57.353 52.632 0.00 0.00 46.17 2.12
556 557 6.943718 TCGGGACCAATACTTTTTGTTCTAAT 59.056 34.615 0.00 0.00 0.00 1.73
620 622 2.851102 CCCCTCCGAGGCCATCAT 60.851 66.667 9.17 0.00 32.73 2.45
626 628 2.094675 CTCCGAGGCCATCATGTTTTT 58.905 47.619 5.01 0.00 0.00 1.94
647 649 6.767524 TTTCATTGTATACCCGCTGAAAAT 57.232 33.333 12.80 0.00 31.69 1.82
650 652 7.254227 TCATTGTATACCCGCTGAAAATAAC 57.746 36.000 0.00 0.00 0.00 1.89
658 660 5.014202 ACCCGCTGAAAATAACCTTGTAAT 58.986 37.500 0.00 0.00 0.00 1.89
662 664 7.386573 CCCGCTGAAAATAACCTTGTAATTTTT 59.613 33.333 0.00 0.00 33.99 1.94
679 681 9.160496 TGTAATTTTTCATGAAAACAAGCTTGT 57.840 25.926 28.78 26.36 44.72 3.16
691 693 9.809096 TGAAAACAAGCTTGTAATTTCATGTTA 57.191 25.926 34.57 22.17 40.31 2.41
693 695 9.816354 AAAACAAGCTTGTAATTTCATGTTACT 57.184 25.926 31.31 8.62 41.31 2.24
696 698 9.284968 ACAAGCTTGTAATTTCATGTTACTAGT 57.715 29.630 30.25 0.00 40.16 2.57
737 740 1.041447 AATCCAGCCAGCCATTCTGC 61.041 55.000 0.00 0.00 41.50 4.26
746 749 0.034670 AGCCATTCTGCCAGTCCTTC 60.035 55.000 0.00 0.00 0.00 3.46
850 853 5.470777 AGATCCGAACGTTACAATCCAAAAA 59.529 36.000 0.00 0.00 0.00 1.94
929 939 1.373435 CCAGTCGCTACCCACCAAA 59.627 57.895 0.00 0.00 0.00 3.28
1440 1455 4.436998 GCGGTGGACCTGTCGGAG 62.437 72.222 0.00 0.00 0.00 4.63
1589 1604 0.250209 CTGATGATCTCCAAGGCGGG 60.250 60.000 0.00 0.00 34.36 6.13
1623 1638 4.545706 GTGATCCCGGATGCGGCA 62.546 66.667 21.75 5.70 0.00 5.69
1855 1870 1.142748 GCTCTCGATGTGGACAGGG 59.857 63.158 0.00 0.00 0.00 4.45
1992 2007 2.282462 CACTCCTGCCACCCCAAC 60.282 66.667 0.00 0.00 0.00 3.77
2205 2220 1.747924 CAGGAGCTCGTGAGATCAGAA 59.252 52.381 28.24 0.00 45.06 3.02
2215 2230 3.736252 CGTGAGATCAGAAAACGAGTTGT 59.264 43.478 0.00 0.00 36.38 3.32
2316 2331 2.753966 GGCATTCGTGCGTGCATCT 61.754 57.895 0.00 0.00 43.00 2.90
2331 2346 1.858091 CATCTTTCTGGAGCGCGTAT 58.142 50.000 8.43 0.00 0.00 3.06
2378 2393 2.068977 GATGAGGAAATGGGGGAGGAT 58.931 52.381 0.00 0.00 0.00 3.24
2464 2479 4.453892 GGGCAATGCTGAGGGGCT 62.454 66.667 4.82 0.00 0.00 5.19
2493 2508 2.438254 AATGGCTGCGGCAATCGA 60.438 55.556 21.31 0.00 42.43 3.59
2592 2607 4.617298 GCTCTCTTCAGACTTACACTGGAC 60.617 50.000 0.00 0.00 36.22 4.02
2629 2644 6.516739 AAAGCCTCTAGGTTTTATTCTTGC 57.483 37.500 8.88 0.00 44.99 4.01
2630 2645 4.527944 AGCCTCTAGGTTTTATTCTTGCC 58.472 43.478 0.00 0.00 37.57 4.52
2631 2646 3.632604 GCCTCTAGGTTTTATTCTTGCCC 59.367 47.826 0.00 0.00 37.57 5.36
2632 2647 4.628959 GCCTCTAGGTTTTATTCTTGCCCT 60.629 45.833 0.00 0.00 37.57 5.19
2713 2746 6.375455 CAGTGTTTTGTAATAAGAGGATGGCT 59.625 38.462 0.00 0.00 0.00 4.75
2769 2802 3.297134 TGCTCTCTTGGTCTTGGTTTT 57.703 42.857 0.00 0.00 0.00 2.43
2789 2822 6.478673 GGTTTTGGGTAATTCTTTCAGTGTTG 59.521 38.462 0.00 0.00 0.00 3.33
2790 2823 7.262048 GTTTTGGGTAATTCTTTCAGTGTTGA 58.738 34.615 0.00 0.00 0.00 3.18
2804 2837 3.169207 GTGTTGAACACGAATTCTCCG 57.831 47.619 13.14 0.00 39.53 4.63
2811 2844 6.160664 TGAACACGAATTCTCCGATTTTAC 57.839 37.500 3.52 0.00 0.00 2.01
2813 2846 3.615496 ACACGAATTCTCCGATTTTACCG 59.385 43.478 3.52 0.00 0.00 4.02
2816 2849 5.006358 CACGAATTCTCCGATTTTACCGATT 59.994 40.000 3.52 0.00 0.00 3.34
2866 4402 9.822185 AAAGCAATATTGGATTAGGAATGAAAC 57.178 29.630 17.02 0.00 0.00 2.78
3162 4700 6.796785 TGGAGACATGAGTTATCTTCATCA 57.203 37.500 0.00 0.00 33.40 3.07
3167 4705 8.247666 AGACATGAGTTATCTTCATCAGATCA 57.752 34.615 0.00 0.00 41.80 2.92
3238 4776 5.481473 TCCTACGGTAGTACCAACAGAAAAT 59.519 40.000 19.41 0.00 38.47 1.82
3240 4778 5.217978 ACGGTAGTACCAACAGAAAATGA 57.782 39.130 19.41 0.00 38.47 2.57
3281 4820 8.257602 TGAATGCAATGTTAGGGAGTACTATA 57.742 34.615 0.00 0.00 0.00 1.31
3342 4881 5.904941 TGGAACATATTTATTTGGCAGCAG 58.095 37.500 0.00 0.00 0.00 4.24
3420 4966 8.958119 ACAAGTTTCTAATAAATATCCTCGCA 57.042 30.769 0.00 0.00 0.00 5.10
3421 4967 9.391006 ACAAGTTTCTAATAAATATCCTCGCAA 57.609 29.630 0.00 0.00 0.00 4.85
3456 5002 9.920946 TTCTAATAAATAGAAGATGGCCACTTT 57.079 29.630 8.16 5.17 43.99 2.66
3457 5003 9.561069 TCTAATAAATAGAAGATGGCCACTTTC 57.439 33.333 8.16 15.41 37.70 2.62
3458 5004 9.566432 CTAATAAATAGAAGATGGCCACTTTCT 57.434 33.333 27.41 27.41 33.04 2.52
3459 5005 8.457238 AATAAATAGAAGATGGCCACTTTCTC 57.543 34.615 27.88 14.66 0.00 2.87
3460 5006 5.441718 AATAGAAGATGGCCACTTTCTCA 57.558 39.130 27.88 18.10 0.00 3.27
3461 5007 3.795688 AGAAGATGGCCACTTTCTCAA 57.204 42.857 21.95 0.00 0.00 3.02
3462 5008 4.104383 AGAAGATGGCCACTTTCTCAAA 57.896 40.909 21.95 0.00 0.00 2.69
3463 5009 4.473444 AGAAGATGGCCACTTTCTCAAAA 58.527 39.130 21.95 0.00 0.00 2.44
3464 5010 5.082425 AGAAGATGGCCACTTTCTCAAAAT 58.918 37.500 21.95 2.39 0.00 1.82
3465 5011 5.541484 AGAAGATGGCCACTTTCTCAAAATT 59.459 36.000 21.95 1.75 0.00 1.82
3466 5012 5.813513 AGATGGCCACTTTCTCAAAATTT 57.186 34.783 8.16 0.00 0.00 1.82
3467 5013 6.178607 AGATGGCCACTTTCTCAAAATTTT 57.821 33.333 8.16 0.00 0.00 1.82
3468 5014 6.226052 AGATGGCCACTTTCTCAAAATTTTC 58.774 36.000 8.16 0.00 0.00 2.29
3469 5015 5.350504 TGGCCACTTTCTCAAAATTTTCA 57.649 34.783 0.00 0.00 0.00 2.69
3470 5016 5.927819 TGGCCACTTTCTCAAAATTTTCAT 58.072 33.333 0.00 0.00 0.00 2.57
3471 5017 6.355747 TGGCCACTTTCTCAAAATTTTCATT 58.644 32.000 0.00 0.00 0.00 2.57
3472 5018 6.827762 TGGCCACTTTCTCAAAATTTTCATTT 59.172 30.769 0.00 0.00 33.72 2.32
3473 5019 7.134163 GGCCACTTTCTCAAAATTTTCATTTG 58.866 34.615 0.00 0.00 38.76 2.32
3474 5020 7.201723 GGCCACTTTCTCAAAATTTTCATTTGT 60.202 33.333 0.00 0.00 38.57 2.83
3475 5021 7.852454 GCCACTTTCTCAAAATTTTCATTTGTC 59.148 33.333 0.00 0.00 38.57 3.18
3476 5022 8.337532 CCACTTTCTCAAAATTTTCATTTGTCC 58.662 33.333 0.00 0.00 38.57 4.02
3477 5023 8.337532 CACTTTCTCAAAATTTTCATTTGTCCC 58.662 33.333 0.00 0.00 38.57 4.46
3478 5024 8.046107 ACTTTCTCAAAATTTTCATTTGTCCCA 58.954 29.630 0.00 0.00 38.57 4.37
3479 5025 8.798859 TTTCTCAAAATTTTCATTTGTCCCAA 57.201 26.923 0.00 0.00 38.57 4.12
3480 5026 8.798859 TTCTCAAAATTTTCATTTGTCCCAAA 57.201 26.923 0.00 0.00 38.57 3.28
3481 5027 8.436046 TCTCAAAATTTTCATTTGTCCCAAAG 57.564 30.769 0.00 0.00 38.57 2.77
3482 5028 8.046107 TCTCAAAATTTTCATTTGTCCCAAAGT 58.954 29.630 0.00 0.00 38.57 2.66
3483 5029 7.983307 TCAAAATTTTCATTTGTCCCAAAGTG 58.017 30.769 0.00 0.00 38.57 3.16
3484 5030 6.940831 AAATTTTCATTTGTCCCAAAGTGG 57.059 33.333 0.00 0.00 32.21 4.00
3485 5031 5.628797 ATTTTCATTTGTCCCAAAGTGGT 57.371 34.783 0.00 0.00 35.17 4.16
3486 5032 4.664150 TTTCATTTGTCCCAAAGTGGTC 57.336 40.909 0.00 0.00 35.17 4.02
3487 5033 2.226330 TCATTTGTCCCAAAGTGGTCG 58.774 47.619 0.00 0.00 35.17 4.79
3488 5034 1.269448 CATTTGTCCCAAAGTGGTCGG 59.731 52.381 0.00 0.00 35.17 4.79
3489 5035 0.547075 TTTGTCCCAAAGTGGTCGGA 59.453 50.000 0.00 0.00 35.17 4.55
3490 5036 0.768622 TTGTCCCAAAGTGGTCGGAT 59.231 50.000 0.00 0.00 35.17 4.18
3491 5037 0.323629 TGTCCCAAAGTGGTCGGATC 59.676 55.000 0.00 0.00 35.17 3.36
3492 5038 0.392595 GTCCCAAAGTGGTCGGATCC 60.393 60.000 0.00 0.00 35.17 3.36
3493 5039 0.546747 TCCCAAAGTGGTCGGATCCT 60.547 55.000 10.75 0.00 35.17 3.24
3494 5040 0.328258 CCCAAAGTGGTCGGATCCTT 59.672 55.000 10.75 0.00 35.17 3.36
3495 5041 1.679032 CCCAAAGTGGTCGGATCCTTC 60.679 57.143 10.75 2.26 35.17 3.46
3496 5042 1.679032 CCAAAGTGGTCGGATCCTTCC 60.679 57.143 10.75 12.20 33.86 3.46
3497 5043 0.618981 AAAGTGGTCGGATCCTTCCC 59.381 55.000 10.75 7.20 39.01 3.97
3498 5044 0.252742 AAGTGGTCGGATCCTTCCCT 60.253 55.000 10.75 8.33 39.01 4.20
3499 5045 0.252742 AGTGGTCGGATCCTTCCCTT 60.253 55.000 10.75 0.59 39.01 3.95
3500 5046 0.107654 GTGGTCGGATCCTTCCCTTG 60.108 60.000 10.75 0.00 39.01 3.61
3501 5047 0.252513 TGGTCGGATCCTTCCCTTGA 60.253 55.000 10.75 0.00 39.01 3.02
3502 5048 0.178301 GGTCGGATCCTTCCCTTGAC 59.822 60.000 10.75 7.62 39.01 3.18
3503 5049 0.178301 GTCGGATCCTTCCCTTGACC 59.822 60.000 10.75 0.00 39.01 4.02
3504 5050 0.981277 TCGGATCCTTCCCTTGACCC 60.981 60.000 10.75 0.00 39.01 4.46
3505 5051 0.983378 CGGATCCTTCCCTTGACCCT 60.983 60.000 10.75 0.00 39.01 4.34
3506 5052 0.548510 GGATCCTTCCCTTGACCCTG 59.451 60.000 3.84 0.00 35.84 4.45
3507 5053 0.106967 GATCCTTCCCTTGACCCTGC 60.107 60.000 0.00 0.00 0.00 4.85
3508 5054 1.915078 ATCCTTCCCTTGACCCTGCG 61.915 60.000 0.00 0.00 0.00 5.18
3509 5055 2.747855 CTTCCCTTGACCCTGCGC 60.748 66.667 0.00 0.00 0.00 6.09
3510 5056 3.551496 CTTCCCTTGACCCTGCGCA 62.551 63.158 10.98 10.98 0.00 6.09
3511 5057 3.126703 TTCCCTTGACCCTGCGCAA 62.127 57.895 13.05 0.00 0.00 4.85
3512 5058 3.058160 CCCTTGACCCTGCGCAAG 61.058 66.667 13.05 4.91 40.81 4.01
3532 5078 2.203070 GGAGCTACATGCACCGGG 60.203 66.667 6.32 0.00 42.21 5.73
3533 5079 2.897350 GAGCTACATGCACCGGGC 60.897 66.667 6.32 7.25 45.94 6.13
3534 5080 3.391665 GAGCTACATGCACCGGGCT 62.392 63.158 6.32 0.81 45.94 5.19
3535 5081 3.204827 GCTACATGCACCGGGCTG 61.205 66.667 6.32 9.21 45.15 4.85
3536 5082 3.204827 CTACATGCACCGGGCTGC 61.205 66.667 6.32 8.50 45.15 5.25
3537 5083 4.794648 TACATGCACCGGGCTGCC 62.795 66.667 11.05 11.05 45.15 4.85
3542 5088 4.733542 GCACCGGGCTGCCCTTTA 62.734 66.667 33.39 0.00 42.67 1.85
3543 5089 2.438434 CACCGGGCTGCCCTTTAG 60.438 66.667 33.39 21.30 42.67 1.85
3544 5090 4.426313 ACCGGGCTGCCCTTTAGC 62.426 66.667 33.39 8.22 42.67 3.09
3545 5091 4.115199 CCGGGCTGCCCTTTAGCT 62.115 66.667 33.39 0.00 42.67 3.32
3546 5092 2.044946 CGGGCTGCCCTTTAGCTT 60.045 61.111 33.39 0.00 42.67 3.74
3547 5093 2.115291 CGGGCTGCCCTTTAGCTTC 61.115 63.158 33.39 5.94 42.67 3.86
3548 5094 1.304617 GGGCTGCCCTTTAGCTTCT 59.695 57.895 30.42 0.00 41.34 2.85
3549 5095 1.034292 GGGCTGCCCTTTAGCTTCTG 61.034 60.000 30.42 0.00 41.34 3.02
3550 5096 1.661498 GGCTGCCCTTTAGCTTCTGC 61.661 60.000 7.66 0.00 40.92 4.26
3578 5124 7.809546 AAATTTCTAGCAAGTATAGAAGGGC 57.190 36.000 0.00 0.00 39.68 5.19
3579 5125 4.585955 TTCTAGCAAGTATAGAAGGGCG 57.414 45.455 0.00 0.00 34.99 6.13
3580 5126 2.891580 TCTAGCAAGTATAGAAGGGCGG 59.108 50.000 0.00 0.00 0.00 6.13
3581 5127 1.789523 AGCAAGTATAGAAGGGCGGA 58.210 50.000 0.00 0.00 0.00 5.54
3582 5128 2.116238 AGCAAGTATAGAAGGGCGGAA 58.884 47.619 0.00 0.00 0.00 4.30
3583 5129 2.158943 AGCAAGTATAGAAGGGCGGAAC 60.159 50.000 0.00 0.00 0.00 3.62
3584 5130 2.158943 GCAAGTATAGAAGGGCGGAACT 60.159 50.000 0.00 0.00 0.00 3.01
3585 5131 3.681874 GCAAGTATAGAAGGGCGGAACTT 60.682 47.826 0.00 0.00 0.00 2.66
3586 5132 4.514401 CAAGTATAGAAGGGCGGAACTTT 58.486 43.478 0.00 0.00 0.00 2.66
3587 5133 4.403585 AGTATAGAAGGGCGGAACTTTC 57.596 45.455 0.00 0.00 0.00 2.62
3588 5134 3.773119 AGTATAGAAGGGCGGAACTTTCA 59.227 43.478 0.00 0.00 0.00 2.69
3589 5135 3.713826 ATAGAAGGGCGGAACTTTCAA 57.286 42.857 0.00 0.00 0.00 2.69
3590 5136 1.605753 AGAAGGGCGGAACTTTCAAC 58.394 50.000 0.00 0.00 0.00 3.18
3591 5137 1.133915 AGAAGGGCGGAACTTTCAACA 60.134 47.619 0.00 0.00 0.00 3.33
3592 5138 1.679153 GAAGGGCGGAACTTTCAACAA 59.321 47.619 0.00 0.00 0.00 2.83
3593 5139 1.770294 AGGGCGGAACTTTCAACAAA 58.230 45.000 0.00 0.00 0.00 2.83
3594 5140 1.681264 AGGGCGGAACTTTCAACAAAG 59.319 47.619 0.00 0.00 44.24 2.77
3595 5141 1.679153 GGGCGGAACTTTCAACAAAGA 59.321 47.619 1.50 0.00 41.60 2.52
3596 5142 2.296190 GGGCGGAACTTTCAACAAAGAT 59.704 45.455 1.50 0.00 41.60 2.40
3597 5143 3.504520 GGGCGGAACTTTCAACAAAGATA 59.495 43.478 1.50 0.00 41.60 1.98
3598 5144 4.157840 GGGCGGAACTTTCAACAAAGATAT 59.842 41.667 1.50 0.00 41.60 1.63
3599 5145 5.095490 GGCGGAACTTTCAACAAAGATATG 58.905 41.667 1.50 0.00 41.60 1.78
3600 5146 5.106317 GGCGGAACTTTCAACAAAGATATGA 60.106 40.000 1.50 0.00 41.60 2.15
3601 5147 6.024049 GCGGAACTTTCAACAAAGATATGAG 58.976 40.000 1.50 0.00 41.60 2.90
3602 5148 6.128282 GCGGAACTTTCAACAAAGATATGAGA 60.128 38.462 1.50 0.00 41.60 3.27
3603 5149 7.573096 GCGGAACTTTCAACAAAGATATGAGAA 60.573 37.037 1.50 0.00 41.60 2.87
3604 5150 7.746475 CGGAACTTTCAACAAAGATATGAGAAC 59.254 37.037 1.50 0.00 41.60 3.01
3605 5151 8.567948 GGAACTTTCAACAAAGATATGAGAACA 58.432 33.333 1.50 0.00 41.60 3.18
3608 5154 9.288576 ACTTTCAACAAAGATATGAGAACATCA 57.711 29.630 1.50 0.00 41.60 3.07
3609 5155 9.770503 CTTTCAACAAAGATATGAGAACATCAG 57.229 33.333 0.00 0.00 40.56 2.90
3610 5156 9.506018 TTTCAACAAAGATATGAGAACATCAGA 57.494 29.630 0.00 0.00 42.53 3.27
3611 5157 8.713737 TCAACAAAGATATGAGAACATCAGAG 57.286 34.615 0.00 0.00 42.53 3.35
3612 5158 7.279536 TCAACAAAGATATGAGAACATCAGAGC 59.720 37.037 0.00 0.00 42.53 4.09
3613 5159 6.647229 ACAAAGATATGAGAACATCAGAGCA 58.353 36.000 0.00 0.00 42.53 4.26
3614 5160 6.538021 ACAAAGATATGAGAACATCAGAGCAC 59.462 38.462 0.00 0.00 42.53 4.40
3615 5161 6.482898 AAGATATGAGAACATCAGAGCACT 57.517 37.500 0.00 0.00 42.53 4.40
3616 5162 6.088016 AGATATGAGAACATCAGAGCACTC 57.912 41.667 0.00 0.00 42.53 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.206371 GCTCAAACCTCCTTACCGCTA 59.794 52.381 0.00 0.00 0.00 4.26
1 2 0.036294 GCTCAAACCTCCTTACCGCT 60.036 55.000 0.00 0.00 0.00 5.52
2 3 1.359459 CGCTCAAACCTCCTTACCGC 61.359 60.000 0.00 0.00 0.00 5.68
3 4 0.245539 TCGCTCAAACCTCCTTACCG 59.754 55.000 0.00 0.00 0.00 4.02
4 5 1.405661 CCTCGCTCAAACCTCCTTACC 60.406 57.143 0.00 0.00 0.00 2.85
5 6 1.275573 ACCTCGCTCAAACCTCCTTAC 59.724 52.381 0.00 0.00 0.00 2.34
6 7 1.549170 GACCTCGCTCAAACCTCCTTA 59.451 52.381 0.00 0.00 0.00 2.69
7 8 0.321996 GACCTCGCTCAAACCTCCTT 59.678 55.000 0.00 0.00 0.00 3.36
8 9 1.878656 CGACCTCGCTCAAACCTCCT 61.879 60.000 0.00 0.00 0.00 3.69
9 10 1.446272 CGACCTCGCTCAAACCTCC 60.446 63.158 0.00 0.00 0.00 4.30
10 11 4.170723 CGACCTCGCTCAAACCTC 57.829 61.111 0.00 0.00 0.00 3.85
20 21 0.670546 AACCACTCATTGCGACCTCG 60.671 55.000 0.00 0.00 43.27 4.63
21 22 1.523758 AAACCACTCATTGCGACCTC 58.476 50.000 0.00 0.00 0.00 3.85
22 23 1.981256 AAAACCACTCATTGCGACCT 58.019 45.000 0.00 0.00 0.00 3.85
23 24 2.223711 ACAAAAACCACTCATTGCGACC 60.224 45.455 0.00 0.00 0.00 4.79
24 25 3.078594 ACAAAAACCACTCATTGCGAC 57.921 42.857 0.00 0.00 0.00 5.19
25 26 3.791973 AACAAAAACCACTCATTGCGA 57.208 38.095 0.00 0.00 0.00 5.10
26 27 3.616379 ACAAACAAAAACCACTCATTGCG 59.384 39.130 0.00 0.00 0.00 4.85
27 28 5.447144 GGAACAAACAAAAACCACTCATTGC 60.447 40.000 0.00 0.00 0.00 3.56
28 29 5.874261 AGGAACAAACAAAAACCACTCATTG 59.126 36.000 0.00 0.00 0.00 2.82
29 30 5.874261 CAGGAACAAACAAAAACCACTCATT 59.126 36.000 0.00 0.00 0.00 2.57
30 31 5.046663 ACAGGAACAAACAAAAACCACTCAT 60.047 36.000 0.00 0.00 0.00 2.90
31 32 4.282195 ACAGGAACAAACAAAAACCACTCA 59.718 37.500 0.00 0.00 0.00 3.41
32 33 4.816392 ACAGGAACAAACAAAAACCACTC 58.184 39.130 0.00 0.00 0.00 3.51
33 34 4.882842 ACAGGAACAAACAAAAACCACT 57.117 36.364 0.00 0.00 0.00 4.00
34 35 4.991687 TCAACAGGAACAAACAAAAACCAC 59.008 37.500 0.00 0.00 0.00 4.16
35 36 5.215252 TCAACAGGAACAAACAAAAACCA 57.785 34.783 0.00 0.00 0.00 3.67
36 37 5.005299 CGATCAACAGGAACAAACAAAAACC 59.995 40.000 0.00 0.00 0.00 3.27
37 38 5.575218 ACGATCAACAGGAACAAACAAAAAC 59.425 36.000 0.00 0.00 0.00 2.43
38 39 5.715070 ACGATCAACAGGAACAAACAAAAA 58.285 33.333 0.00 0.00 0.00 1.94
39 40 5.124776 AGACGATCAACAGGAACAAACAAAA 59.875 36.000 0.00 0.00 0.00 2.44
40 41 4.638421 AGACGATCAACAGGAACAAACAAA 59.362 37.500 0.00 0.00 0.00 2.83
41 42 4.196193 AGACGATCAACAGGAACAAACAA 58.804 39.130 0.00 0.00 0.00 2.83
42 43 3.804036 AGACGATCAACAGGAACAAACA 58.196 40.909 0.00 0.00 0.00 2.83
43 44 4.989168 AGTAGACGATCAACAGGAACAAAC 59.011 41.667 0.00 0.00 0.00 2.93
44 45 5.209818 AGTAGACGATCAACAGGAACAAA 57.790 39.130 0.00 0.00 0.00 2.83
45 46 4.866508 AGTAGACGATCAACAGGAACAA 57.133 40.909 0.00 0.00 0.00 2.83
46 47 5.970317 TTAGTAGACGATCAACAGGAACA 57.030 39.130 0.00 0.00 0.00 3.18
47 48 6.388278 AGTTTAGTAGACGATCAACAGGAAC 58.612 40.000 0.00 0.00 0.00 3.62
48 49 6.585695 AGTTTAGTAGACGATCAACAGGAA 57.414 37.500 0.00 0.00 0.00 3.36
49 50 6.015688 ACAAGTTTAGTAGACGATCAACAGGA 60.016 38.462 0.00 0.00 0.00 3.86
50 51 6.157211 ACAAGTTTAGTAGACGATCAACAGG 58.843 40.000 0.00 0.00 0.00 4.00
51 52 8.021973 AGTACAAGTTTAGTAGACGATCAACAG 58.978 37.037 0.00 0.00 0.00 3.16
52 53 7.879070 AGTACAAGTTTAGTAGACGATCAACA 58.121 34.615 0.00 0.00 0.00 3.33
53 54 9.271738 GTAGTACAAGTTTAGTAGACGATCAAC 57.728 37.037 0.00 0.00 0.00 3.18
54 55 9.224267 AGTAGTACAAGTTTAGTAGACGATCAA 57.776 33.333 2.52 0.00 0.00 2.57
55 56 8.783833 AGTAGTACAAGTTTAGTAGACGATCA 57.216 34.615 2.52 0.00 0.00 2.92
82 83 9.539825 CAACATAGAGCTACAATCAAGTCTATT 57.460 33.333 0.00 0.00 0.00 1.73
83 84 8.700051 ACAACATAGAGCTACAATCAAGTCTAT 58.300 33.333 0.00 0.00 0.00 1.98
84 85 8.067751 ACAACATAGAGCTACAATCAAGTCTA 57.932 34.615 0.00 0.00 0.00 2.59
85 86 6.940739 ACAACATAGAGCTACAATCAAGTCT 58.059 36.000 0.00 0.00 0.00 3.24
86 87 7.602517 AACAACATAGAGCTACAATCAAGTC 57.397 36.000 0.00 0.00 0.00 3.01
87 88 7.445402 ACAAACAACATAGAGCTACAATCAAGT 59.555 33.333 0.00 0.00 0.00 3.16
88 89 7.810658 ACAAACAACATAGAGCTACAATCAAG 58.189 34.615 0.00 0.00 0.00 3.02
89 90 7.661437 AGACAAACAACATAGAGCTACAATCAA 59.339 33.333 0.00 0.00 0.00 2.57
90 91 7.161404 AGACAAACAACATAGAGCTACAATCA 58.839 34.615 0.00 0.00 0.00 2.57
91 92 7.602517 AGACAAACAACATAGAGCTACAATC 57.397 36.000 0.00 0.00 0.00 2.67
92 93 7.445402 ACAAGACAAACAACATAGAGCTACAAT 59.555 33.333 0.00 0.00 0.00 2.71
93 94 6.765989 ACAAGACAAACAACATAGAGCTACAA 59.234 34.615 0.00 0.00 0.00 2.41
94 95 6.288294 ACAAGACAAACAACATAGAGCTACA 58.712 36.000 0.00 0.00 0.00 2.74
95 96 6.787085 ACAAGACAAACAACATAGAGCTAC 57.213 37.500 0.00 0.00 0.00 3.58
96 97 7.497579 TGAAACAAGACAAACAACATAGAGCTA 59.502 33.333 0.00 0.00 0.00 3.32
97 98 6.318648 TGAAACAAGACAAACAACATAGAGCT 59.681 34.615 0.00 0.00 0.00 4.09
98 99 6.494842 TGAAACAAGACAAACAACATAGAGC 58.505 36.000 0.00 0.00 0.00 4.09
99 100 7.531871 CGATGAAACAAGACAAACAACATAGAG 59.468 37.037 0.00 0.00 0.00 2.43
100 101 7.011950 ACGATGAAACAAGACAAACAACATAGA 59.988 33.333 0.00 0.00 0.00 1.98
101 102 7.112009 CACGATGAAACAAGACAAACAACATAG 59.888 37.037 0.00 0.00 0.00 2.23
102 103 6.909895 CACGATGAAACAAGACAAACAACATA 59.090 34.615 0.00 0.00 0.00 2.29
103 104 5.743398 CACGATGAAACAAGACAAACAACAT 59.257 36.000 0.00 0.00 0.00 2.71
104 105 5.092105 CACGATGAAACAAGACAAACAACA 58.908 37.500 0.00 0.00 0.00 3.33
105 106 4.499040 CCACGATGAAACAAGACAAACAAC 59.501 41.667 0.00 0.00 0.00 3.32
106 107 4.156922 ACCACGATGAAACAAGACAAACAA 59.843 37.500 0.00 0.00 0.00 2.83
107 108 3.692101 ACCACGATGAAACAAGACAAACA 59.308 39.130 0.00 0.00 0.00 2.83
108 109 4.035017 CACCACGATGAAACAAGACAAAC 58.965 43.478 0.00 0.00 0.00 2.93
109 110 3.066064 CCACCACGATGAAACAAGACAAA 59.934 43.478 0.00 0.00 0.00 2.83
110 111 2.616376 CCACCACGATGAAACAAGACAA 59.384 45.455 0.00 0.00 0.00 3.18
111 112 2.217750 CCACCACGATGAAACAAGACA 58.782 47.619 0.00 0.00 0.00 3.41
112 113 2.032030 CACCACCACGATGAAACAAGAC 60.032 50.000 0.00 0.00 0.00 3.01
113 114 2.158885 TCACCACCACGATGAAACAAGA 60.159 45.455 0.00 0.00 0.00 3.02
114 115 2.032030 GTCACCACCACGATGAAACAAG 60.032 50.000 0.00 0.00 0.00 3.16
115 116 1.944024 GTCACCACCACGATGAAACAA 59.056 47.619 0.00 0.00 0.00 2.83
116 117 1.134371 TGTCACCACCACGATGAAACA 60.134 47.619 0.00 0.00 0.00 2.83
117 118 1.588674 TGTCACCACCACGATGAAAC 58.411 50.000 0.00 0.00 0.00 2.78
118 119 2.333688 TTGTCACCACCACGATGAAA 57.666 45.000 0.00 0.00 0.00 2.69
119 120 2.559698 ATTGTCACCACCACGATGAA 57.440 45.000 0.00 0.00 0.00 2.57
120 121 2.422597 GAATTGTCACCACCACGATGA 58.577 47.619 0.00 0.00 0.00 2.92
121 122 1.468520 GGAATTGTCACCACCACGATG 59.531 52.381 0.00 0.00 0.00 3.84
122 123 1.613255 GGGAATTGTCACCACCACGAT 60.613 52.381 0.00 0.00 0.00 3.73
123 124 0.250553 GGGAATTGTCACCACCACGA 60.251 55.000 0.00 0.00 0.00 4.35
124 125 0.250727 AGGGAATTGTCACCACCACG 60.251 55.000 0.00 0.00 0.00 4.94
125 126 1.247567 CAGGGAATTGTCACCACCAC 58.752 55.000 0.00 0.00 0.00 4.16
126 127 0.850100 ACAGGGAATTGTCACCACCA 59.150 50.000 0.00 0.00 0.00 4.17
127 128 1.202879 TCACAGGGAATTGTCACCACC 60.203 52.381 0.00 0.00 0.00 4.61
128 129 2.270352 TCACAGGGAATTGTCACCAC 57.730 50.000 0.00 0.00 0.00 4.16
129 130 2.555006 CCATCACAGGGAATTGTCACCA 60.555 50.000 0.00 0.00 0.00 4.17
130 131 2.094675 CCATCACAGGGAATTGTCACC 58.905 52.381 0.00 0.00 0.00 4.02
142 143 4.415150 AGGCGCACCCCATCACAG 62.415 66.667 10.83 0.00 36.11 3.66
143 144 4.720902 CAGGCGCACCCCATCACA 62.721 66.667 10.83 0.00 36.11 3.58
154 155 4.840005 GACTACCCCAGCAGGCGC 62.840 72.222 0.00 0.00 38.99 6.53
155 156 4.514577 CGACTACCCCAGCAGGCG 62.515 72.222 0.00 0.00 36.88 5.52
156 157 3.372554 GACGACTACCCCAGCAGGC 62.373 68.421 0.00 0.00 0.00 4.85
157 158 2.893398 GACGACTACCCCAGCAGG 59.107 66.667 0.00 0.00 0.00 4.85
158 159 1.874345 AACGACGACTACCCCAGCAG 61.874 60.000 0.00 0.00 0.00 4.24
159 160 0.608856 TAACGACGACTACCCCAGCA 60.609 55.000 0.00 0.00 0.00 4.41
160 161 0.743097 ATAACGACGACTACCCCAGC 59.257 55.000 0.00 0.00 0.00 4.85
161 162 1.535437 GCATAACGACGACTACCCCAG 60.535 57.143 0.00 0.00 0.00 4.45
162 163 0.457035 GCATAACGACGACTACCCCA 59.543 55.000 0.00 0.00 0.00 4.96
163 164 0.457035 TGCATAACGACGACTACCCC 59.543 55.000 0.00 0.00 0.00 4.95
164 165 2.124903 CATGCATAACGACGACTACCC 58.875 52.381 0.00 0.00 0.00 3.69
165 166 2.805845 ACATGCATAACGACGACTACC 58.194 47.619 0.00 0.00 0.00 3.18
166 167 4.545706 CGAAACATGCATAACGACGACTAC 60.546 45.833 0.00 0.00 0.00 2.73
167 168 3.544682 CGAAACATGCATAACGACGACTA 59.455 43.478 0.00 0.00 0.00 2.59
168 169 2.344441 CGAAACATGCATAACGACGACT 59.656 45.455 0.00 0.00 0.00 4.18
169 170 2.343246 TCGAAACATGCATAACGACGAC 59.657 45.455 0.00 0.00 0.00 4.34
170 171 2.597520 TCGAAACATGCATAACGACGA 58.402 42.857 0.00 5.03 0.00 4.20
171 172 3.569304 ATCGAAACATGCATAACGACG 57.431 42.857 15.06 10.77 32.93 5.12
172 173 7.892445 ATAAAATCGAAACATGCATAACGAC 57.108 32.000 15.06 1.07 32.93 4.34
173 174 8.822855 ACTATAAAATCGAAACATGCATAACGA 58.177 29.630 15.09 15.09 0.00 3.85
174 175 8.987599 ACTATAAAATCGAAACATGCATAACG 57.012 30.769 0.00 3.31 0.00 3.18
177 178 8.282592 GCAGACTATAAAATCGAAACATGCATA 58.717 33.333 0.00 0.00 0.00 3.14
178 179 7.012704 AGCAGACTATAAAATCGAAACATGCAT 59.987 33.333 0.00 0.00 0.00 3.96
179 180 6.316140 AGCAGACTATAAAATCGAAACATGCA 59.684 34.615 0.00 0.00 0.00 3.96
180 181 6.719365 AGCAGACTATAAAATCGAAACATGC 58.281 36.000 0.00 0.00 0.00 4.06
181 182 7.011389 TGGAGCAGACTATAAAATCGAAACATG 59.989 37.037 0.00 0.00 0.00 3.21
182 183 7.047891 TGGAGCAGACTATAAAATCGAAACAT 58.952 34.615 0.00 0.00 0.00 2.71
183 184 6.403049 TGGAGCAGACTATAAAATCGAAACA 58.597 36.000 0.00 0.00 0.00 2.83
184 185 6.535508 ACTGGAGCAGACTATAAAATCGAAAC 59.464 38.462 0.00 0.00 35.18 2.78
185 186 6.640518 ACTGGAGCAGACTATAAAATCGAAA 58.359 36.000 0.00 0.00 35.18 3.46
186 187 6.222038 ACTGGAGCAGACTATAAAATCGAA 57.778 37.500 0.00 0.00 35.18 3.71
187 188 5.854010 ACTGGAGCAGACTATAAAATCGA 57.146 39.130 0.00 0.00 35.18 3.59
188 189 6.740110 ACTACTGGAGCAGACTATAAAATCG 58.260 40.000 0.00 0.00 35.18 3.34
189 190 8.852135 ACTACTACTGGAGCAGACTATAAAATC 58.148 37.037 0.00 0.00 35.18 2.17
190 191 8.770010 ACTACTACTGGAGCAGACTATAAAAT 57.230 34.615 0.00 0.00 35.18 1.82
191 192 8.591114 AACTACTACTGGAGCAGACTATAAAA 57.409 34.615 0.00 0.00 35.18 1.52
192 193 8.467598 CAAACTACTACTGGAGCAGACTATAAA 58.532 37.037 0.00 0.00 35.18 1.40
193 194 7.068348 CCAAACTACTACTGGAGCAGACTATAA 59.932 40.741 0.00 0.00 35.18 0.98
194 195 6.546403 CCAAACTACTACTGGAGCAGACTATA 59.454 42.308 0.00 0.00 35.18 1.31
195 196 5.361285 CCAAACTACTACTGGAGCAGACTAT 59.639 44.000 0.00 0.00 35.18 2.12
196 197 4.705507 CCAAACTACTACTGGAGCAGACTA 59.294 45.833 0.00 0.00 35.18 2.59
197 198 3.511934 CCAAACTACTACTGGAGCAGACT 59.488 47.826 0.00 0.00 35.18 3.24
198 199 3.258622 ACCAAACTACTACTGGAGCAGAC 59.741 47.826 0.00 0.00 35.18 3.51
199 200 3.507411 ACCAAACTACTACTGGAGCAGA 58.493 45.455 0.00 0.00 35.18 4.26
200 201 3.511934 AGACCAAACTACTACTGGAGCAG 59.488 47.826 0.00 0.00 37.52 4.24
201 202 3.258372 CAGACCAAACTACTACTGGAGCA 59.742 47.826 0.00 0.00 34.16 4.26
202 203 3.258622 ACAGACCAAACTACTACTGGAGC 59.741 47.826 0.00 0.00 34.16 4.70
203 204 4.322049 CCACAGACCAAACTACTACTGGAG 60.322 50.000 0.00 0.00 34.16 3.86
204 205 3.576982 CCACAGACCAAACTACTACTGGA 59.423 47.826 0.00 0.00 34.16 3.86
205 206 3.323979 ACCACAGACCAAACTACTACTGG 59.676 47.826 0.00 0.00 36.24 4.00
206 207 4.281182 AGACCACAGACCAAACTACTACTG 59.719 45.833 0.00 0.00 0.00 2.74
207 208 4.281182 CAGACCACAGACCAAACTACTACT 59.719 45.833 0.00 0.00 0.00 2.57
208 209 4.557205 CAGACCACAGACCAAACTACTAC 58.443 47.826 0.00 0.00 0.00 2.73
209 210 3.576982 CCAGACCACAGACCAAACTACTA 59.423 47.826 0.00 0.00 0.00 1.82
210 211 2.368875 CCAGACCACAGACCAAACTACT 59.631 50.000 0.00 0.00 0.00 2.57
211 212 2.550208 CCCAGACCACAGACCAAACTAC 60.550 54.545 0.00 0.00 0.00 2.73
212 213 1.697432 CCCAGACCACAGACCAAACTA 59.303 52.381 0.00 0.00 0.00 2.24
213 214 0.474184 CCCAGACCACAGACCAAACT 59.526 55.000 0.00 0.00 0.00 2.66
214 215 0.182775 ACCCAGACCACAGACCAAAC 59.817 55.000 0.00 0.00 0.00 2.93
215 216 0.472471 GACCCAGACCACAGACCAAA 59.528 55.000 0.00 0.00 0.00 3.28
216 217 1.415672 GGACCCAGACCACAGACCAA 61.416 60.000 0.00 0.00 0.00 3.67
217 218 1.841556 GGACCCAGACCACAGACCA 60.842 63.158 0.00 0.00 0.00 4.02
218 219 1.128188 AAGGACCCAGACCACAGACC 61.128 60.000 0.00 0.00 0.00 3.85
219 220 0.765510 AAAGGACCCAGACCACAGAC 59.234 55.000 0.00 0.00 0.00 3.51
220 221 2.409064 TAAAGGACCCAGACCACAGA 57.591 50.000 0.00 0.00 0.00 3.41
221 222 3.502123 TTTAAAGGACCCAGACCACAG 57.498 47.619 0.00 0.00 0.00 3.66
222 223 3.955524 TTTTAAAGGACCCAGACCACA 57.044 42.857 0.00 0.00 0.00 4.17
223 224 4.037565 CAGTTTTTAAAGGACCCAGACCAC 59.962 45.833 0.00 0.00 0.00 4.16
224 225 4.079672 TCAGTTTTTAAAGGACCCAGACCA 60.080 41.667 0.00 0.00 0.00 4.02
225 226 4.277672 GTCAGTTTTTAAAGGACCCAGACC 59.722 45.833 0.00 0.00 0.00 3.85
226 227 4.024302 CGTCAGTTTTTAAAGGACCCAGAC 60.024 45.833 0.00 0.00 0.00 3.51
227 228 4.131596 CGTCAGTTTTTAAAGGACCCAGA 58.868 43.478 0.00 0.00 0.00 3.86
228 229 3.304458 GCGTCAGTTTTTAAAGGACCCAG 60.304 47.826 0.00 0.00 0.00 4.45
229 230 2.619646 GCGTCAGTTTTTAAAGGACCCA 59.380 45.455 0.00 0.00 0.00 4.51
230 231 2.882761 AGCGTCAGTTTTTAAAGGACCC 59.117 45.455 0.00 0.00 0.00 4.46
231 232 4.563337 AAGCGTCAGTTTTTAAAGGACC 57.437 40.909 0.00 0.00 0.00 4.46
232 233 7.118825 AGGTATAAGCGTCAGTTTTTAAAGGAC 59.881 37.037 0.00 0.00 0.00 3.85
233 234 7.163441 AGGTATAAGCGTCAGTTTTTAAAGGA 58.837 34.615 0.00 0.00 0.00 3.36
234 235 7.373778 AGGTATAAGCGTCAGTTTTTAAAGG 57.626 36.000 0.00 0.00 0.00 3.11
235 236 7.171434 CGAGGTATAAGCGTCAGTTTTTAAAG 58.829 38.462 0.00 0.00 0.00 1.85
236 237 6.401367 GCGAGGTATAAGCGTCAGTTTTTAAA 60.401 38.462 0.00 0.00 0.00 1.52
237 238 5.062558 GCGAGGTATAAGCGTCAGTTTTTAA 59.937 40.000 0.00 0.00 0.00 1.52
238 239 4.563976 GCGAGGTATAAGCGTCAGTTTTTA 59.436 41.667 0.00 0.00 0.00 1.52
239 240 3.370061 GCGAGGTATAAGCGTCAGTTTTT 59.630 43.478 0.00 0.00 0.00 1.94
240 241 2.928116 GCGAGGTATAAGCGTCAGTTTT 59.072 45.455 0.00 0.00 0.00 2.43
241 242 2.165845 AGCGAGGTATAAGCGTCAGTTT 59.834 45.455 0.00 0.00 35.78 2.66
242 243 1.749634 AGCGAGGTATAAGCGTCAGTT 59.250 47.619 0.00 0.00 35.78 3.16
243 244 1.390565 AGCGAGGTATAAGCGTCAGT 58.609 50.000 0.00 0.00 35.78 3.41
244 245 2.493713 AAGCGAGGTATAAGCGTCAG 57.506 50.000 0.00 0.00 35.78 3.51
245 246 2.953466 AAAGCGAGGTATAAGCGTCA 57.047 45.000 0.00 0.00 35.78 4.35
264 265 4.154556 CGAGGTATAAGCCCGTTTCAAAAA 59.845 41.667 0.00 0.00 0.00 1.94
265 266 3.685756 CGAGGTATAAGCCCGTTTCAAAA 59.314 43.478 0.00 0.00 0.00 2.44
266 267 3.264104 CGAGGTATAAGCCCGTTTCAAA 58.736 45.455 0.00 0.00 0.00 2.69
267 268 2.896168 CGAGGTATAAGCCCGTTTCAA 58.104 47.619 0.00 0.00 0.00 2.69
268 269 1.472026 GCGAGGTATAAGCCCGTTTCA 60.472 52.381 0.00 0.00 0.00 2.69
269 270 1.202498 AGCGAGGTATAAGCCCGTTTC 60.202 52.381 0.00 0.00 0.00 2.78
270 271 0.828677 AGCGAGGTATAAGCCCGTTT 59.171 50.000 0.00 0.00 0.00 3.60
271 272 0.828677 AAGCGAGGTATAAGCCCGTT 59.171 50.000 0.00 0.00 0.00 4.44
272 273 0.828677 AAAGCGAGGTATAAGCCCGT 59.171 50.000 0.00 0.00 0.00 5.28
273 274 1.597663 CAAAAGCGAGGTATAAGCCCG 59.402 52.381 0.00 0.00 0.00 6.13
274 275 1.947456 CCAAAAGCGAGGTATAAGCCC 59.053 52.381 0.00 0.00 0.00 5.19
275 276 2.640184 ACCAAAAGCGAGGTATAAGCC 58.360 47.619 0.00 0.00 36.07 4.35
276 277 4.696899 AAACCAAAAGCGAGGTATAAGC 57.303 40.909 0.00 0.00 37.07 3.09
277 278 5.414765 AGGAAAACCAAAAGCGAGGTATAAG 59.585 40.000 0.00 0.00 37.07 1.73
278 279 5.318630 AGGAAAACCAAAAGCGAGGTATAA 58.681 37.500 0.00 0.00 37.07 0.98
279 280 4.913784 AGGAAAACCAAAAGCGAGGTATA 58.086 39.130 0.00 0.00 37.07 1.47
280 281 3.763057 AGGAAAACCAAAAGCGAGGTAT 58.237 40.909 0.00 0.00 37.07 2.73
281 282 3.217681 AGGAAAACCAAAAGCGAGGTA 57.782 42.857 0.00 0.00 37.07 3.08
282 283 2.067365 AGGAAAACCAAAAGCGAGGT 57.933 45.000 0.00 0.00 40.61 3.85
283 284 4.577834 TTAAGGAAAACCAAAAGCGAGG 57.422 40.909 0.00 0.00 0.00 4.63
284 285 5.768317 TCATTAAGGAAAACCAAAAGCGAG 58.232 37.500 0.00 0.00 0.00 5.03
285 286 5.776173 TCATTAAGGAAAACCAAAAGCGA 57.224 34.783 0.00 0.00 0.00 4.93
286 287 6.836577 TTTCATTAAGGAAAACCAAAAGCG 57.163 33.333 12.58 0.00 34.05 4.68
290 291 9.278978 GGCTTATTTTCATTAAGGAAAACCAAA 57.721 29.630 25.35 18.77 46.19 3.28
291 292 7.600752 CGGCTTATTTTCATTAAGGAAAACCAA 59.399 33.333 25.35 20.41 46.19 3.67
292 293 7.039644 TCGGCTTATTTTCATTAAGGAAAACCA 60.040 33.333 25.35 15.73 46.19 3.67
293 294 7.317390 TCGGCTTATTTTCATTAAGGAAAACC 58.683 34.615 25.35 20.50 46.19 3.27
294 295 8.751302 TTCGGCTTATTTTCATTAAGGAAAAC 57.249 30.769 25.35 14.89 46.19 2.43
296 297 8.343168 TCTTCGGCTTATTTTCATTAAGGAAA 57.657 30.769 11.06 11.06 35.11 3.13
297 298 7.067008 CCTCTTCGGCTTATTTTCATTAAGGAA 59.933 37.037 0.00 0.00 0.00 3.36
298 299 6.542370 CCTCTTCGGCTTATTTTCATTAAGGA 59.458 38.462 0.00 0.00 0.00 3.36
299 300 6.238759 CCCTCTTCGGCTTATTTTCATTAAGG 60.239 42.308 0.00 0.00 0.00 2.69
300 301 6.542370 TCCCTCTTCGGCTTATTTTCATTAAG 59.458 38.462 0.00 0.00 0.00 1.85
301 302 6.419791 TCCCTCTTCGGCTTATTTTCATTAA 58.580 36.000 0.00 0.00 0.00 1.40
302 303 5.996644 TCCCTCTTCGGCTTATTTTCATTA 58.003 37.500 0.00 0.00 0.00 1.90
303 304 4.855340 TCCCTCTTCGGCTTATTTTCATT 58.145 39.130 0.00 0.00 0.00 2.57
304 305 4.503714 TCCCTCTTCGGCTTATTTTCAT 57.496 40.909 0.00 0.00 0.00 2.57
305 306 3.992943 TCCCTCTTCGGCTTATTTTCA 57.007 42.857 0.00 0.00 0.00 2.69
306 307 3.065510 GCTTCCCTCTTCGGCTTATTTTC 59.934 47.826 0.00 0.00 0.00 2.29
307 308 3.017442 GCTTCCCTCTTCGGCTTATTTT 58.983 45.455 0.00 0.00 0.00 1.82
308 309 2.644676 GCTTCCCTCTTCGGCTTATTT 58.355 47.619 0.00 0.00 0.00 1.40
309 310 1.134068 GGCTTCCCTCTTCGGCTTATT 60.134 52.381 0.00 0.00 0.00 1.40
310 311 0.470341 GGCTTCCCTCTTCGGCTTAT 59.530 55.000 0.00 0.00 0.00 1.73
311 312 1.623542 GGGCTTCCCTCTTCGGCTTA 61.624 60.000 0.00 0.00 41.34 3.09
312 313 2.671682 GGCTTCCCTCTTCGGCTT 59.328 61.111 0.00 0.00 0.00 4.35
313 314 3.403558 GGGCTTCCCTCTTCGGCT 61.404 66.667 0.00 0.00 41.34 5.52
323 324 3.054361 TCTCTAATCAAAGTGGGGCTTCC 60.054 47.826 0.00 0.00 36.17 3.46
324 325 4.222124 TCTCTAATCAAAGTGGGGCTTC 57.778 45.455 0.00 0.00 36.17 3.86
325 326 4.657814 TTCTCTAATCAAAGTGGGGCTT 57.342 40.909 0.00 0.00 39.52 4.35
326 327 4.657814 TTTCTCTAATCAAAGTGGGGCT 57.342 40.909 0.00 0.00 0.00 5.19
327 328 5.722021 TTTTTCTCTAATCAAAGTGGGGC 57.278 39.130 0.00 0.00 0.00 5.80
347 348 7.340232 TGTTGCTAGCCATCTGATAATCTTTTT 59.660 33.333 13.29 0.00 0.00 1.94
348 349 6.830324 TGTTGCTAGCCATCTGATAATCTTTT 59.170 34.615 13.29 0.00 0.00 2.27
349 350 6.359804 TGTTGCTAGCCATCTGATAATCTTT 58.640 36.000 13.29 0.00 0.00 2.52
350 351 5.933617 TGTTGCTAGCCATCTGATAATCTT 58.066 37.500 13.29 0.00 0.00 2.40
355 356 5.557576 ATTCTGTTGCTAGCCATCTGATA 57.442 39.130 13.29 4.42 0.00 2.15
388 389 1.098869 TGATGGCGACTCTCACTCTC 58.901 55.000 0.00 0.00 0.00 3.20
389 390 1.774110 ATGATGGCGACTCTCACTCT 58.226 50.000 0.00 0.00 0.00 3.24
390 391 2.593346 AATGATGGCGACTCTCACTC 57.407 50.000 0.00 0.00 0.00 3.51
391 392 3.340814 AAAATGATGGCGACTCTCACT 57.659 42.857 0.00 0.00 0.00 3.41
392 393 3.181506 GGAAAAATGATGGCGACTCTCAC 60.182 47.826 0.00 0.00 0.00 3.51
393 394 3.009723 GGAAAAATGATGGCGACTCTCA 58.990 45.455 0.00 0.00 0.00 3.27
394 395 3.274288 AGGAAAAATGATGGCGACTCTC 58.726 45.455 0.00 0.00 0.00 3.20
399 400 3.020984 GGGTTAGGAAAAATGATGGCGA 58.979 45.455 0.00 0.00 0.00 5.54
403 404 9.506018 AAAATCAAAGGGTTAGGAAAAATGATG 57.494 29.630 0.00 0.00 0.00 3.07
460 461 0.983467 TGAGCTACAGAACCATGGCA 59.017 50.000 13.04 0.00 0.00 4.92
471 472 5.510861 GGAAACTCTAACCAACTGAGCTACA 60.511 44.000 0.00 0.00 0.00 2.74
499 500 3.583228 ACCCATGACCTTCCGTATATCA 58.417 45.455 0.00 0.00 0.00 2.15
503 504 2.193127 TGAACCCATGACCTTCCGTAT 58.807 47.619 0.00 0.00 0.00 3.06
583 585 4.265353 GGGGAGGGGGATTGAGTATACTAT 60.265 50.000 5.09 0.00 0.00 2.12
613 615 6.701400 GGGTATACAATGAAAAACATGATGGC 59.299 38.462 5.01 0.00 39.39 4.40
620 622 5.004448 TCAGCGGGTATACAATGAAAAACA 58.996 37.500 5.01 0.00 0.00 2.83
626 628 6.261381 GGTTATTTTCAGCGGGTATACAATGA 59.739 38.462 5.01 0.26 0.00 2.57
650 652 8.829612 AGCTTGTTTTCATGAAAAATTACAAGG 58.170 29.630 36.02 26.71 41.26 3.61
691 693 6.377245 ACTCTGTGAAGTAGGAGTACTAGT 57.623 41.667 0.00 0.00 38.66 2.57
692 694 8.967664 AATACTCTGTGAAGTAGGAGTACTAG 57.032 38.462 0.00 0.00 41.87 2.57
694 696 9.924010 ATTAATACTCTGTGAAGTAGGAGTACT 57.076 33.333 0.00 0.00 41.87 2.73
696 698 9.352191 GGATTAATACTCTGTGAAGTAGGAGTA 57.648 37.037 0.00 0.00 42.78 2.59
697 699 7.839705 TGGATTAATACTCTGTGAAGTAGGAGT 59.160 37.037 0.00 0.00 41.22 3.85
698 700 8.239038 TGGATTAATACTCTGTGAAGTAGGAG 57.761 38.462 0.00 0.00 35.31 3.69
699 701 7.201920 GCTGGATTAATACTCTGTGAAGTAGGA 60.202 40.741 0.00 0.00 35.31 2.94
700 702 6.926272 GCTGGATTAATACTCTGTGAAGTAGG 59.074 42.308 0.00 0.00 35.31 3.18
701 703 6.926272 GGCTGGATTAATACTCTGTGAAGTAG 59.074 42.308 0.00 0.00 35.31 2.57
737 740 0.944311 CGGTCAACACGAAGGACTGG 60.944 60.000 0.00 0.00 34.93 4.00
746 749 3.602062 GTGATTTTATTGCGGTCAACACG 59.398 43.478 0.00 0.00 34.60 4.49
850 853 3.338126 CTACGTCGGGTTGAGCGCT 62.338 63.158 11.27 11.27 0.00 5.92
1370 1385 4.212913 GCTCGAGCATCTCCCGCA 62.213 66.667 31.91 0.00 41.59 5.69
1566 1581 1.745141 GCCTTGGAGATCATCAGCGTT 60.745 52.381 0.00 0.00 0.00 4.84
1623 1638 0.453793 CCATCTTCTCGTCGCTGTCT 59.546 55.000 0.00 0.00 0.00 3.41
1707 1722 3.462021 GGTGGACAGAGCATAGATCAAC 58.538 50.000 0.00 0.00 0.00 3.18
1717 1732 4.803426 CTCGCCGGTGGACAGAGC 62.803 72.222 16.49 0.00 0.00 4.09
1773 1788 4.226846 AGATCCTCTGATTCTGGCTTGAAA 59.773 41.667 0.00 0.00 0.00 2.69
1855 1870 0.388649 ACGTCGAGCACCTTCATGAC 60.389 55.000 0.00 0.00 0.00 3.06
2023 2038 2.027625 CCCTCGAGGCGTGAACAAC 61.028 63.158 26.87 0.00 0.00 3.32
2205 2220 3.815401 CTCCTCCATTGAACAACTCGTTT 59.185 43.478 0.00 0.00 38.19 3.60
2215 2230 2.356432 CCATGTCTGCTCCTCCATTGAA 60.356 50.000 0.00 0.00 0.00 2.69
2316 2331 2.268298 GAAGAATACGCGCTCCAGAAA 58.732 47.619 5.73 0.00 0.00 2.52
2421 2436 2.752238 CTCTCACTCCCGCCGACT 60.752 66.667 0.00 0.00 0.00 4.18
2433 2448 3.063526 GCCCTCAGCACACTCTCA 58.936 61.111 0.00 0.00 42.97 3.27
2464 2479 1.001020 AGCCATTGCCATCGTTGGA 60.001 52.632 16.83 0.00 46.92 3.53
2493 2508 1.059913 CCTTGTCCTCAACCTCCAGT 58.940 55.000 0.00 0.00 0.00 4.00
2592 2607 0.594796 GGCTTTTGCTGTTGTCACCG 60.595 55.000 0.00 0.00 46.54 4.94
2622 2637 7.881775 ACGAATAAAGAATAAGGGCAAGAAT 57.118 32.000 0.00 0.00 0.00 2.40
2623 2638 7.362574 CCAACGAATAAAGAATAAGGGCAAGAA 60.363 37.037 0.00 0.00 0.00 2.52
2624 2639 6.094881 CCAACGAATAAAGAATAAGGGCAAGA 59.905 38.462 0.00 0.00 0.00 3.02
2625 2640 6.127730 ACCAACGAATAAAGAATAAGGGCAAG 60.128 38.462 0.00 0.00 0.00 4.01
2626 2641 5.712917 ACCAACGAATAAAGAATAAGGGCAA 59.287 36.000 0.00 0.00 0.00 4.52
2627 2642 5.258051 ACCAACGAATAAAGAATAAGGGCA 58.742 37.500 0.00 0.00 0.00 5.36
2628 2643 5.830000 ACCAACGAATAAAGAATAAGGGC 57.170 39.130 0.00 0.00 0.00 5.19
2629 2644 7.335924 TCTGAACCAACGAATAAAGAATAAGGG 59.664 37.037 0.00 0.00 0.00 3.95
2630 2645 8.263940 TCTGAACCAACGAATAAAGAATAAGG 57.736 34.615 0.00 0.00 0.00 2.69
2713 2746 6.238981 GCTCTCATGTATGATCTTGACTCTCA 60.239 42.308 0.00 0.00 36.02 3.27
2769 2802 5.888724 TGTTCAACACTGAAAGAATTACCCA 59.111 36.000 0.00 0.00 43.18 4.51
2789 2822 5.557388 GGTAAAATCGGAGAATTCGTGTTC 58.443 41.667 0.00 0.00 43.58 3.18
2790 2823 4.092383 CGGTAAAATCGGAGAATTCGTGTT 59.908 41.667 0.00 0.00 43.58 3.32
2794 2827 5.652744 AATCGGTAAAATCGGAGAATTCG 57.347 39.130 0.00 0.00 43.58 3.34
2811 2844 9.224267 AGGATATCACTTGATAAATGAAATCGG 57.776 33.333 4.83 0.00 40.09 4.18
2833 4362 9.881773 TCCTAATCCAATATTGCTTTAAAGGAT 57.118 29.630 16.78 6.46 36.25 3.24
2847 4376 6.321181 GGCACAGTTTCATTCCTAATCCAATA 59.679 38.462 0.00 0.00 0.00 1.90
2848 4377 5.127682 GGCACAGTTTCATTCCTAATCCAAT 59.872 40.000 0.00 0.00 0.00 3.16
2849 4378 4.462483 GGCACAGTTTCATTCCTAATCCAA 59.538 41.667 0.00 0.00 0.00 3.53
3013 4551 8.679725 TCACTCCTAAGTCCTAATCCAGTATAT 58.320 37.037 0.00 0.00 31.71 0.86
3014 4552 8.053776 TCACTCCTAAGTCCTAATCCAGTATA 57.946 38.462 0.00 0.00 31.71 1.47
3092 4630 6.403200 CCAAACATTGTATTCCTACGACCTTG 60.403 42.308 0.00 0.00 0.00 3.61
3194 4732 7.709182 CGTAGGAGTTGTGGATGATGTAAAATA 59.291 37.037 0.00 0.00 0.00 1.40
3195 4733 6.538742 CGTAGGAGTTGTGGATGATGTAAAAT 59.461 38.462 0.00 0.00 0.00 1.82
3198 4736 5.006153 CGTAGGAGTTGTGGATGATGTAA 57.994 43.478 0.00 0.00 0.00 2.41
3238 4776 5.693104 GCATTCAAAACTTTCAAGCTGATCA 59.307 36.000 0.00 0.00 0.00 2.92
3240 4778 5.603596 TGCATTCAAAACTTTCAAGCTGAT 58.396 33.333 0.00 0.00 0.00 2.90
3318 4857 6.098695 ACTGCTGCCAAATAAATATGTTCCAT 59.901 34.615 0.00 0.00 0.00 3.41
3342 4881 6.543831 ACCTTGAAATATGTGGAAGCATCTAC 59.456 38.462 0.00 0.00 37.54 2.59
3426 4972 9.920946 TGGCCATCTTCTATTTATTAGAAACTT 57.079 29.630 0.00 0.00 44.41 2.66
3427 4973 9.343539 GTGGCCATCTTCTATTTATTAGAAACT 57.656 33.333 9.72 0.00 44.41 2.66
3428 4974 9.343539 AGTGGCCATCTTCTATTTATTAGAAAC 57.656 33.333 9.72 0.00 44.41 2.78
3429 4975 9.920946 AAGTGGCCATCTTCTATTTATTAGAAA 57.079 29.630 9.72 0.00 44.41 2.52
3430 4976 9.920946 AAAGTGGCCATCTTCTATTTATTAGAA 57.079 29.630 9.72 0.00 43.21 2.10
3431 4977 9.561069 GAAAGTGGCCATCTTCTATTTATTAGA 57.439 33.333 9.72 0.00 35.06 2.10
3432 4978 9.566432 AGAAAGTGGCCATCTTCTATTTATTAG 57.434 33.333 23.76 0.00 0.00 1.73
3433 4979 9.561069 GAGAAAGTGGCCATCTTCTATTTATTA 57.439 33.333 24.61 0.00 0.00 0.98
3434 4980 8.055181 TGAGAAAGTGGCCATCTTCTATTTATT 58.945 33.333 24.61 8.17 0.00 1.40
3435 4981 7.577303 TGAGAAAGTGGCCATCTTCTATTTAT 58.423 34.615 24.61 9.72 0.00 1.40
3436 4982 6.957631 TGAGAAAGTGGCCATCTTCTATTTA 58.042 36.000 24.61 13.25 0.00 1.40
3437 4983 5.819991 TGAGAAAGTGGCCATCTTCTATTT 58.180 37.500 24.61 11.70 0.00 1.40
3438 4984 5.441718 TGAGAAAGTGGCCATCTTCTATT 57.558 39.130 24.61 9.89 0.00 1.73
3439 4985 5.441718 TTGAGAAAGTGGCCATCTTCTAT 57.558 39.130 24.61 10.46 0.00 1.98
3440 4986 4.908601 TTGAGAAAGTGGCCATCTTCTA 57.091 40.909 24.61 12.80 0.00 2.10
3441 4987 3.795688 TTGAGAAAGTGGCCATCTTCT 57.204 42.857 24.75 24.75 0.00 2.85
3442 4988 4.853924 TTTTGAGAAAGTGGCCATCTTC 57.146 40.909 9.72 15.09 0.00 2.87
3443 4989 5.813513 AATTTTGAGAAAGTGGCCATCTT 57.186 34.783 9.72 11.85 0.00 2.40
3444 4990 5.813513 AAATTTTGAGAAAGTGGCCATCT 57.186 34.783 9.72 8.17 0.00 2.90
3445 4991 5.990996 TGAAAATTTTGAGAAAGTGGCCATC 59.009 36.000 9.72 1.70 0.00 3.51
3446 4992 5.927819 TGAAAATTTTGAGAAAGTGGCCAT 58.072 33.333 9.72 0.00 0.00 4.40
3447 4993 5.350504 TGAAAATTTTGAGAAAGTGGCCA 57.649 34.783 8.47 0.00 0.00 5.36
3448 4994 6.866010 AATGAAAATTTTGAGAAAGTGGCC 57.134 33.333 8.47 0.00 0.00 5.36
3449 4995 7.696755 ACAAATGAAAATTTTGAGAAAGTGGC 58.303 30.769 8.47 0.00 37.48 5.01
3450 4996 8.337532 GGACAAATGAAAATTTTGAGAAAGTGG 58.662 33.333 8.47 0.00 37.48 4.00
3451 4997 8.337532 GGGACAAATGAAAATTTTGAGAAAGTG 58.662 33.333 8.47 0.35 37.48 3.16
3452 4998 8.046107 TGGGACAAATGAAAATTTTGAGAAAGT 58.954 29.630 8.47 0.00 37.48 2.66
3453 4999 8.436046 TGGGACAAATGAAAATTTTGAGAAAG 57.564 30.769 8.47 0.00 37.48 2.62
3472 5018 0.323629 GATCCGACCACTTTGGGACA 59.676 55.000 0.00 0.00 43.37 4.02
3473 5019 0.392595 GGATCCGACCACTTTGGGAC 60.393 60.000 0.00 0.00 43.37 4.46
3474 5020 0.546747 AGGATCCGACCACTTTGGGA 60.547 55.000 5.98 0.00 43.37 4.37
3475 5021 0.328258 AAGGATCCGACCACTTTGGG 59.672 55.000 5.98 0.00 43.37 4.12
3476 5022 1.679032 GGAAGGATCCGACCACTTTGG 60.679 57.143 20.27 0.00 38.76 3.28
3477 5023 1.739067 GGAAGGATCCGACCACTTTG 58.261 55.000 20.27 0.00 35.59 2.77
3487 5033 0.548510 CAGGGTCAAGGGAAGGATCC 59.451 60.000 2.48 2.48 45.77 3.36
3488 5034 0.106967 GCAGGGTCAAGGGAAGGATC 60.107 60.000 0.00 0.00 0.00 3.36
3489 5035 1.915078 CGCAGGGTCAAGGGAAGGAT 61.915 60.000 0.00 0.00 0.00 3.24
3490 5036 2.592993 CGCAGGGTCAAGGGAAGGA 61.593 63.158 0.00 0.00 0.00 3.36
3491 5037 2.045926 CGCAGGGTCAAGGGAAGG 60.046 66.667 0.00 0.00 0.00 3.46
3492 5038 2.747855 GCGCAGGGTCAAGGGAAG 60.748 66.667 0.30 0.00 0.00 3.46
3493 5039 3.126703 TTGCGCAGGGTCAAGGGAA 62.127 57.895 11.31 0.00 0.00 3.97
3494 5040 3.551496 CTTGCGCAGGGTCAAGGGA 62.551 63.158 12.39 0.00 36.83 4.20
3495 5041 3.058160 CTTGCGCAGGGTCAAGGG 61.058 66.667 12.39 0.00 36.83 3.95
3496 5042 3.741476 GCTTGCGCAGGGTCAAGG 61.741 66.667 21.88 0.00 39.87 3.61
3497 5043 4.093952 CGCTTGCGCAGGGTCAAG 62.094 66.667 21.88 10.95 41.79 3.02
3504 5050 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
3507 5053 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
3508 5054 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
3509 5055 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
3510 5056 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
3516 5062 2.897350 GCCCGGTGCATGTAGCTC 60.897 66.667 11.25 0.00 45.94 4.09
3517 5063 3.402681 AGCCCGGTGCATGTAGCT 61.403 61.111 15.92 4.82 45.94 3.32
3518 5064 3.204827 CAGCCCGGTGCATGTAGC 61.205 66.667 15.92 2.56 44.83 3.58
3519 5065 3.204827 GCAGCCCGGTGCATGTAG 61.205 66.667 13.70 0.91 43.41 2.74
3520 5066 4.794648 GGCAGCCCGGTGCATGTA 62.795 66.667 19.47 0.00 45.93 2.29
3530 5076 1.034292 CAGAAGCTAAAGGGCAGCCC 61.034 60.000 24.90 24.90 45.90 5.19
3531 5077 1.661498 GCAGAAGCTAAAGGGCAGCC 61.661 60.000 1.26 1.26 39.99 4.85
3532 5078 1.805910 GCAGAAGCTAAAGGGCAGC 59.194 57.895 0.00 0.00 39.41 5.25
3552 5098 8.687242 GCCCTTCTATACTTGCTAGAAATTTTT 58.313 33.333 1.04 0.00 35.40 1.94
3553 5099 7.012421 CGCCCTTCTATACTTGCTAGAAATTTT 59.988 37.037 1.04 0.00 35.40 1.82
3554 5100 6.483640 CGCCCTTCTATACTTGCTAGAAATTT 59.516 38.462 1.04 0.00 35.40 1.82
3555 5101 5.992217 CGCCCTTCTATACTTGCTAGAAATT 59.008 40.000 1.04 0.00 35.40 1.82
3556 5102 5.511545 CCGCCCTTCTATACTTGCTAGAAAT 60.512 44.000 1.04 0.00 35.40 2.17
3557 5103 4.202223 CCGCCCTTCTATACTTGCTAGAAA 60.202 45.833 1.04 0.00 35.40 2.52
3558 5104 3.321111 CCGCCCTTCTATACTTGCTAGAA 59.679 47.826 1.04 0.00 34.78 2.10
3559 5105 2.891580 CCGCCCTTCTATACTTGCTAGA 59.108 50.000 1.04 0.00 0.00 2.43
3560 5106 2.891580 TCCGCCCTTCTATACTTGCTAG 59.108 50.000 0.00 0.00 0.00 3.42
3561 5107 2.953453 TCCGCCCTTCTATACTTGCTA 58.047 47.619 0.00 0.00 0.00 3.49
3562 5108 1.789523 TCCGCCCTTCTATACTTGCT 58.210 50.000 0.00 0.00 0.00 3.91
3563 5109 2.158943 AGTTCCGCCCTTCTATACTTGC 60.159 50.000 0.00 0.00 0.00 4.01
3564 5110 3.821421 AGTTCCGCCCTTCTATACTTG 57.179 47.619 0.00 0.00 0.00 3.16
3565 5111 4.224370 TGAAAGTTCCGCCCTTCTATACTT 59.776 41.667 0.00 0.00 0.00 2.24
3566 5112 3.773119 TGAAAGTTCCGCCCTTCTATACT 59.227 43.478 0.00 0.00 0.00 2.12
3567 5113 4.133013 TGAAAGTTCCGCCCTTCTATAC 57.867 45.455 0.00 0.00 0.00 1.47
3568 5114 4.020039 TGTTGAAAGTTCCGCCCTTCTATA 60.020 41.667 0.00 0.00 0.00 1.31
3569 5115 3.244770 TGTTGAAAGTTCCGCCCTTCTAT 60.245 43.478 0.00 0.00 0.00 1.98
3570 5116 2.105134 TGTTGAAAGTTCCGCCCTTCTA 59.895 45.455 0.00 0.00 0.00 2.10
3571 5117 1.133915 TGTTGAAAGTTCCGCCCTTCT 60.134 47.619 0.00 0.00 0.00 2.85
3572 5118 1.314730 TGTTGAAAGTTCCGCCCTTC 58.685 50.000 0.00 0.00 0.00 3.46
3573 5119 1.770294 TTGTTGAAAGTTCCGCCCTT 58.230 45.000 0.00 0.00 0.00 3.95
3574 5120 1.681264 CTTTGTTGAAAGTTCCGCCCT 59.319 47.619 0.00 0.00 34.86 5.19
3575 5121 1.679153 TCTTTGTTGAAAGTTCCGCCC 59.321 47.619 0.00 0.00 39.79 6.13
3576 5122 3.643159 ATCTTTGTTGAAAGTTCCGCC 57.357 42.857 0.00 0.00 39.79 6.13
3577 5123 5.938322 TCATATCTTTGTTGAAAGTTCCGC 58.062 37.500 0.00 0.00 39.79 5.54
3578 5124 7.364522 TCTCATATCTTTGTTGAAAGTTCCG 57.635 36.000 0.00 0.00 39.79 4.30
3579 5125 8.567948 TGTTCTCATATCTTTGTTGAAAGTTCC 58.432 33.333 0.00 0.00 39.79 3.62
3582 5128 9.288576 TGATGTTCTCATATCTTTGTTGAAAGT 57.711 29.630 0.00 0.00 36.25 2.66
3583 5129 9.770503 CTGATGTTCTCATATCTTTGTTGAAAG 57.229 33.333 0.00 0.00 36.21 2.62
3584 5130 9.506018 TCTGATGTTCTCATATCTTTGTTGAAA 57.494 29.630 0.00 0.00 34.06 2.69
3585 5131 9.159364 CTCTGATGTTCTCATATCTTTGTTGAA 57.841 33.333 0.00 0.00 34.06 2.69
3586 5132 7.279536 GCTCTGATGTTCTCATATCTTTGTTGA 59.720 37.037 0.00 0.00 34.06 3.18
3587 5133 7.065443 TGCTCTGATGTTCTCATATCTTTGTTG 59.935 37.037 0.00 0.00 34.06 3.33
3588 5134 7.065563 GTGCTCTGATGTTCTCATATCTTTGTT 59.934 37.037 0.00 0.00 34.06 2.83
3589 5135 6.538021 GTGCTCTGATGTTCTCATATCTTTGT 59.462 38.462 0.00 0.00 34.06 2.83
3590 5136 6.762187 AGTGCTCTGATGTTCTCATATCTTTG 59.238 38.462 0.00 0.00 34.06 2.77
3591 5137 6.887013 AGTGCTCTGATGTTCTCATATCTTT 58.113 36.000 0.00 0.00 34.06 2.52
3592 5138 6.482898 AGTGCTCTGATGTTCTCATATCTT 57.517 37.500 0.00 0.00 34.06 2.40
3593 5139 6.088016 GAGTGCTCTGATGTTCTCATATCT 57.912 41.667 0.00 0.00 34.06 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.