Multiple sequence alignment - TraesCS4B01G284400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G284400 chr4B 100.000 5372 0 0 554 5925 568333212 568338583 0.000000e+00 9921.0
1 TraesCS4B01G284400 chr4B 100.000 112 0 0 1 112 568332659 568332770 2.160000e-49 207.0
2 TraesCS4B01G284400 chr4A 92.784 5391 291 48 564 5917 12685431 12680102 0.000000e+00 7710.0
3 TraesCS4B01G284400 chr4A 91.429 105 6 1 1 105 12685529 12685428 2.230000e-29 141.0
4 TraesCS4B01G284400 chr4D 94.936 4443 214 7 564 4997 455247766 455252206 0.000000e+00 6948.0
5 TraesCS4B01G284400 chr4D 83.860 570 49 21 4997 5541 455252240 455252791 2.460000e-138 503.0
6 TraesCS4B01G284400 chr4D 81.364 440 67 11 1775 2207 23906994 23907425 1.580000e-90 344.0
7 TraesCS4B01G284400 chr4D 86.054 294 25 5 5582 5874 455252788 455253066 9.650000e-78 302.0
8 TraesCS4B01G284400 chr4D 92.381 105 5 1 1 105 455247668 455247769 4.780000e-31 147.0
9 TraesCS4B01G284400 chr4D 96.970 33 1 0 5893 5925 455253068 455253100 8.300000e-04 56.5
10 TraesCS4B01G284400 chr7D 80.254 552 73 20 1728 2270 212242514 212241990 3.350000e-102 383.0
11 TraesCS4B01G284400 chr3D 80.254 552 71 22 1728 2270 141511776 141512298 1.200000e-101 381.0
12 TraesCS4B01G284400 chr7A 81.991 422 56 12 1852 2270 577685086 577684682 2.040000e-89 340.0
13 TraesCS4B01G284400 chr6B 81.754 422 57 12 1852 2270 705321777 705322181 9.510000e-88 335.0
14 TraesCS4B01G284400 chr3B 80.499 441 70 11 1775 2207 661728732 661728300 2.060000e-84 324.0
15 TraesCS4B01G284400 chr3B 80.499 441 70 11 1775 2207 661761421 661760989 2.060000e-84 324.0
16 TraesCS4B01G284400 chr2D 86.420 162 22 0 1495 1656 535293654 535293815 1.700000e-40 178.0
17 TraesCS4B01G284400 chr2B 100.000 49 0 0 1691 1739 636762553 636762601 2.270000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G284400 chr4B 568332659 568338583 5924 False 5064.0 9921 100.0000 1 5925 2 chr4B.!!$F1 5924
1 TraesCS4B01G284400 chr4A 12680102 12685529 5427 True 3925.5 7710 92.1065 1 5917 2 chr4A.!!$R1 5916
2 TraesCS4B01G284400 chr4D 455247668 455253100 5432 False 1591.3 6948 90.8402 1 5925 5 chr4D.!!$F2 5924
3 TraesCS4B01G284400 chr7D 212241990 212242514 524 True 383.0 383 80.2540 1728 2270 1 chr7D.!!$R1 542
4 TraesCS4B01G284400 chr3D 141511776 141512298 522 False 381.0 381 80.2540 1728 2270 1 chr3D.!!$F1 542

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
57 58 0.531200 GGATCCCTTCGTCTTCGTGT 59.469 55.0 0.00 0.00 38.33 4.49 F
64 65 0.669318 TTCGTCTTCGTGTCCATGGC 60.669 55.0 6.96 2.72 38.33 4.40 F
1346 1355 0.535102 GGAGCACGATATTGGGGGTG 60.535 60.0 0.00 0.00 0.00 4.61 F
1765 1774 0.615331 TGGATGACAACAGGGCTCTC 59.385 55.0 0.00 0.00 0.00 3.20 F
3439 3453 0.560688 AAAAGGGTGTGGATGTGGGT 59.439 50.0 0.00 0.00 0.00 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1272 1281 0.109412 GGCTGAATTGCACACAGAGC 60.109 55.0 15.21 6.73 34.07 4.09 R
1765 1774 0.452184 ACAGTCTACTCGCATCGGTG 59.548 55.0 0.00 0.00 0.00 4.94 R
3109 3123 0.529378 CTTGATTGACTGGCAAGCCC 59.471 55.0 9.29 0.00 42.10 5.19 R
3582 3596 0.310543 GCACCGTTCTGCATCAAACA 59.689 50.0 0.00 0.00 37.11 2.83 R
5350 5419 0.106335 ATCAGGAGCAGCTTCGGATG 59.894 55.0 15.07 0.00 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.352805 GTGGGGCTGGAAGGAGTG 59.647 66.667 0.00 0.00 0.00 3.51
57 58 0.531200 GGATCCCTTCGTCTTCGTGT 59.469 55.000 0.00 0.00 38.33 4.49
64 65 0.669318 TTCGTCTTCGTGTCCATGGC 60.669 55.000 6.96 2.72 38.33 4.40
66 67 2.100631 GTCTTCGTGTCCATGGCGG 61.101 63.158 6.96 0.00 0.00 6.13
67 68 2.047274 CTTCGTGTCCATGGCGGT 60.047 61.111 6.96 0.00 35.57 5.68
68 69 2.047655 TTCGTGTCCATGGCGGTC 60.048 61.111 6.96 0.00 35.57 4.79
105 106 3.245519 GGAGATTCGGAAGCGATTTGTAC 59.754 47.826 0.00 0.00 0.00 2.90
106 107 4.113354 GAGATTCGGAAGCGATTTGTACT 58.887 43.478 0.00 0.00 0.00 2.73
108 109 4.935808 AGATTCGGAAGCGATTTGTACTTT 59.064 37.500 0.00 0.00 0.00 2.66
109 110 5.411669 AGATTCGGAAGCGATTTGTACTTTT 59.588 36.000 0.00 0.00 0.00 2.27
110 111 4.398549 TCGGAAGCGATTTGTACTTTTG 57.601 40.909 0.00 0.00 0.00 2.44
111 112 3.810941 TCGGAAGCGATTTGTACTTTTGT 59.189 39.130 0.00 0.00 0.00 2.83
578 579 5.655090 TGAGAATCCTGTAGTATTTGTCGGA 59.345 40.000 0.00 0.00 0.00 4.55
620 621 1.067846 GGTTTTGAATTGGGCCTCGTC 60.068 52.381 4.53 0.00 0.00 4.20
627 628 2.406002 ATTGGGCCTCGTCGGTGTTT 62.406 55.000 4.53 0.00 34.25 2.83
638 639 2.427245 CGGTGTTTTTGGTGGGCCA 61.427 57.895 0.00 0.00 44.38 5.36
726 727 1.815421 CAACTCCGGCCATCTTCGG 60.815 63.158 2.24 0.00 46.89 4.30
864 873 4.641645 CCAGCACGCCCAACCTGA 62.642 66.667 0.00 0.00 0.00 3.86
866 875 3.872603 AGCACGCCCAACCTGACA 61.873 61.111 0.00 0.00 0.00 3.58
899 908 2.718073 CCGTCCCGGGAGAATTCGT 61.718 63.158 27.72 0.00 44.15 3.85
906 915 1.327690 CGGGAGAATTCGTGGGGAGA 61.328 60.000 0.00 0.00 0.00 3.71
986 995 3.475774 CAACCGCGCGACAGGTAC 61.476 66.667 34.63 0.00 40.37 3.34
1011 1020 1.616725 GGGAATCACATGTGGAAGGCA 60.617 52.381 25.16 5.54 0.00 4.75
1079 1088 2.594321 CGTCAGAGACAGAGCTTCTTG 58.406 52.381 0.00 0.00 32.09 3.02
1089 1098 3.641017 AGCTTCTTGGCTCCAGAAC 57.359 52.632 0.00 0.00 38.24 3.01
1095 1104 3.113514 TTGGCTCCAGAACGGCACA 62.114 57.895 0.00 0.00 35.30 4.57
1110 1119 1.954528 CACAGCTGTTCCTGCTTGG 59.045 57.895 18.94 0.00 36.55 3.61
1125 1134 7.003402 TCCTGCTTGGCACTAATTTTATTTT 57.997 32.000 0.00 0.00 33.79 1.82
1126 1135 7.096551 TCCTGCTTGGCACTAATTTTATTTTC 58.903 34.615 0.00 0.00 33.79 2.29
1197 1206 3.882888 CACCGAGGTTATGCCAATAATGT 59.117 43.478 0.00 0.00 40.61 2.71
1229 1238 3.305516 CCAACAGTGGGGCCTTGC 61.306 66.667 0.84 0.00 41.77 4.01
1231 1240 2.203538 AACAGTGGGGCCTTGCTG 60.204 61.111 16.65 16.65 35.31 4.41
1232 1241 2.766925 AACAGTGGGGCCTTGCTGA 61.767 57.895 22.25 0.00 33.57 4.26
1234 1243 1.531365 CAGTGGGGCCTTGCTGAAA 60.531 57.895 0.84 0.00 0.00 2.69
1245 1254 2.143122 CTTGCTGAAAGGTGAACGCTA 58.857 47.619 0.00 0.00 31.68 4.26
1252 1261 3.068448 TGAAAGGTGAACGCTACTACACA 59.932 43.478 0.00 0.00 35.33 3.72
1272 1281 0.540923 CTGGGGAAGAGAGAAGGCAG 59.459 60.000 0.00 0.00 0.00 4.85
1277 1286 1.134729 GGAAGAGAGAAGGCAGCTCTG 60.135 57.143 12.93 0.00 42.50 3.35
1279 1288 0.896923 AGAGAGAAGGCAGCTCTGTG 59.103 55.000 12.93 0.00 42.50 3.66
1292 1301 1.241165 CTCTGTGTGCAATTCAGCCA 58.759 50.000 8.55 0.00 0.00 4.75
1313 1322 1.296715 GCCGGAGCTTCAGAGGAAA 59.703 57.895 5.05 0.00 35.50 3.13
1344 1353 4.800554 GGAGCACGATATTGGGGG 57.199 61.111 0.00 0.00 0.00 5.40
1346 1355 0.535102 GGAGCACGATATTGGGGGTG 60.535 60.000 0.00 0.00 0.00 4.61
1379 1388 5.625197 GCTGATGTCCATTTGGTAGCAAAAT 60.625 40.000 22.71 11.95 36.34 1.82
1411 1420 7.270757 TGGTATTGGGAAATTGATTATGTCG 57.729 36.000 0.00 0.00 0.00 4.35
1434 1443 5.397534 CGAAGTGCTCTTTCATTTTTGACAG 59.602 40.000 2.00 0.00 33.64 3.51
1765 1774 0.615331 TGGATGACAACAGGGCTCTC 59.385 55.000 0.00 0.00 0.00 3.20
1850 1859 5.673514 ACAAATCAGTGGCACTTTTTGATT 58.326 33.333 35.83 29.13 39.45 2.57
2116 2130 3.884037 AAGGGATCCTTGTCAACTGTT 57.116 42.857 12.58 0.00 42.96 3.16
2303 2317 1.952296 GATTTGCCCCAGATGCTACAG 59.048 52.381 0.00 0.00 0.00 2.74
2461 2475 2.840038 AGAGGGATTGTACAGACATGCA 59.160 45.455 0.00 0.00 34.86 3.96
2509 2523 8.592105 TTGAAAGAAAAATAATGCCAGAACTG 57.408 30.769 0.00 0.00 0.00 3.16
2947 2961 6.174720 TCAGAACTAATCAAGTCCTTGTGT 57.825 37.500 6.90 0.00 41.16 3.72
2987 3001 8.690203 TGTTATGGATGTTATTGACCTTATGG 57.310 34.615 0.00 0.00 39.83 2.74
3066 3080 6.146347 GTCCAAACACTGAGTAAGAATGAGAC 59.854 42.308 0.00 0.00 0.00 3.36
3081 3095 0.939577 GAGACGTCAGCTCGTGCAAA 60.940 55.000 19.50 0.00 44.21 3.68
3109 3123 5.770162 AGTTTTGGACAGGTTATTCAGAAGG 59.230 40.000 0.00 0.00 0.00 3.46
3133 3147 3.065925 GCTTGCCAGTCAATCAAGATACC 59.934 47.826 5.50 0.00 39.48 2.73
3244 3258 4.533707 TCTCCTGACAAGAAGGATGTGATT 59.466 41.667 0.00 0.00 42.94 2.57
3253 3267 3.790408 AGAAGGATGTGATTCCCCTCATT 59.210 43.478 0.00 0.00 36.35 2.57
3335 3349 5.938322 TCGACTGCTATCCAAATTTGTTTC 58.062 37.500 16.73 2.57 0.00 2.78
3439 3453 0.560688 AAAAGGGTGTGGATGTGGGT 59.439 50.000 0.00 0.00 0.00 4.51
3521 3535 2.584492 TGGACTGTATGACATCTGCG 57.416 50.000 0.00 0.00 0.00 5.18
3522 3536 1.136891 TGGACTGTATGACATCTGCGG 59.863 52.381 0.00 0.00 0.00 5.69
3526 3540 4.501571 GGACTGTATGACATCTGCGGTAAT 60.502 45.833 0.00 0.00 0.00 1.89
3527 3541 4.371786 ACTGTATGACATCTGCGGTAATG 58.628 43.478 0.00 0.00 0.00 1.90
3536 3550 6.072230 TGACATCTGCGGTAATGAAATCAAAA 60.072 34.615 1.41 0.00 0.00 2.44
3545 3559 7.481798 GCGGTAATGAAATCAAAATATCGGATC 59.518 37.037 0.00 0.00 0.00 3.36
3582 3596 6.770746 ATTTGCATTCTCTTCACTAGCATT 57.229 33.333 0.00 0.00 0.00 3.56
3729 3743 3.565482 TCAGTTGTTCAAGCATCCACTTC 59.435 43.478 0.00 0.00 0.00 3.01
3747 3761 5.770162 CCACTTCAGGGAAGAAATTAAGTGT 59.230 40.000 12.56 0.00 41.71 3.55
3751 3765 7.229506 ACTTCAGGGAAGAAATTAAGTGTCAAG 59.770 37.037 12.56 0.00 41.71 3.02
3955 3972 5.128827 AGACAGTGACAAGTCAAAAGACCTA 59.871 40.000 4.20 0.00 41.85 3.08
4014 4031 5.595952 AGAGAAGAAACATTTTGCAGGTTCT 59.404 36.000 0.00 0.00 0.00 3.01
4099 4116 5.508994 CCTTGTTTATGGGTTTCACAAGTCC 60.509 44.000 8.98 0.00 41.81 3.85
4164 4181 3.012518 CTCAGGGATTAACACCAAGCAG 58.987 50.000 0.61 0.00 0.00 4.24
4199 4216 6.765036 CAGAATAGTATTGAGTCACCATTGCT 59.235 38.462 0.00 0.00 0.00 3.91
4238 4255 7.065683 TCGAGAAAGCACTGCAATTATTTCATA 59.934 33.333 3.30 0.00 0.00 2.15
4254 4271 4.776435 TTCATATGATTGAGGGCAGTGA 57.224 40.909 6.17 0.00 0.00 3.41
4413 4430 4.880696 GCTAATCAAGGAATTCTGCAGACT 59.119 41.667 18.03 8.67 0.00 3.24
4480 4497 3.521126 AGCATGGTAGACTTCCAAGTGAT 59.479 43.478 4.76 0.00 39.88 3.06
4486 4503 4.160626 GGTAGACTTCCAAGTGATGCTAGT 59.839 45.833 0.00 0.00 39.88 2.57
4496 4513 5.163509 CCAAGTGATGCTAGTTACAGCTCTA 60.164 44.000 7.91 0.00 42.30 2.43
4508 4525 9.456147 CTAGTTACAGCTCTATCATATACAGGT 57.544 37.037 0.00 0.00 0.00 4.00
4588 4605 7.712797 TGGAAAACTTAAAACCAAGTGAGATC 58.287 34.615 0.00 0.00 38.74 2.75
4618 4635 2.180017 CTCATGCGTGGCCTTTGC 59.820 61.111 3.32 5.83 0.00 3.68
4658 4675 5.763204 AGTGACGCTAAGAAGATTTTGGAAA 59.237 36.000 0.00 0.00 0.00 3.13
4708 4725 6.553953 TCCTTTGGCATGTATAGAACTGTA 57.446 37.500 0.00 0.00 0.00 2.74
4785 4802 2.641559 GCAGCAAGCAGGACACAC 59.358 61.111 0.00 0.00 44.79 3.82
4831 4848 6.261118 GTCTGTGATAAGCAATTTAAGCAGG 58.739 40.000 0.00 0.00 0.00 4.85
4854 4871 5.221422 GGACTGATAGGAAGACTGAAGGATG 60.221 48.000 0.00 0.00 0.00 3.51
4867 4884 5.491982 ACTGAAGGATGTGAACAACCTATC 58.508 41.667 12.14 11.74 46.70 2.08
4870 4887 7.038302 ACTGAAGGATGTGAACAACCTATCTTA 60.038 37.037 12.14 0.00 46.70 2.10
4873 4890 7.437713 AGGATGTGAACAACCTATCTTATCA 57.562 36.000 10.28 0.00 45.75 2.15
4876 4893 8.398665 GGATGTGAACAACCTATCTTATCAAAC 58.601 37.037 2.68 0.00 36.07 2.93
4877 4894 7.681939 TGTGAACAACCTATCTTATCAAACC 57.318 36.000 0.00 0.00 0.00 3.27
4892 4909 9.177608 TCTTATCAAACCTTATTTCATCCAGTG 57.822 33.333 0.00 0.00 0.00 3.66
4927 4944 9.750783 ATGAAGGATAATAGGAGGAAATGATTG 57.249 33.333 0.00 0.00 0.00 2.67
4983 5000 1.496429 CAAGGGGACTATGGATGGCTT 59.504 52.381 0.00 0.00 42.68 4.35
5000 5051 1.848652 CTTCCCTCCTACGAAGTGGA 58.151 55.000 0.00 0.00 43.65 4.02
5001 5052 2.389715 CTTCCCTCCTACGAAGTGGAT 58.610 52.381 0.00 0.00 43.65 3.41
5053 5104 0.461961 AGAGATACGGCCTTCTGCAC 59.538 55.000 0.00 0.00 43.89 4.57
5069 5121 3.327757 TCTGCACCTTGTAGAAGTGGAAT 59.672 43.478 0.00 0.00 36.18 3.01
5076 5128 4.225267 CCTTGTAGAAGTGGAATAGTGGGT 59.775 45.833 0.00 0.00 0.00 4.51
5096 5148 4.460263 GGTAATACATGGACATTGAGCCA 58.540 43.478 0.00 5.69 38.78 4.75
5098 5150 2.042686 TACATGGACATTGAGCCAGC 57.957 50.000 0.00 0.00 37.64 4.85
5121 5173 4.656041 GGCAAATCTCTTTCTGTTCATCG 58.344 43.478 0.00 0.00 0.00 3.84
5160 5213 3.882326 CCTGGATGCATCCCGGCT 61.882 66.667 34.83 0.00 46.59 5.52
5167 5220 0.185901 ATGCATCCCGGCTAATTGGT 59.814 50.000 0.00 0.00 34.04 3.67
5232 5301 0.710567 CTGGTCATATCGATTCGCGC 59.289 55.000 1.71 0.00 40.61 6.86
5237 5306 3.172050 GTCATATCGATTCGCGCAGTAT 58.828 45.455 8.75 0.00 40.61 2.12
5238 5307 4.340263 GTCATATCGATTCGCGCAGTATA 58.660 43.478 8.75 0.00 40.61 1.47
5240 5309 6.134061 GTCATATCGATTCGCGCAGTATATA 58.866 40.000 8.75 0.00 40.61 0.86
5241 5310 6.301137 GTCATATCGATTCGCGCAGTATATAG 59.699 42.308 8.75 0.00 40.61 1.31
5242 5311 3.400505 TCGATTCGCGCAGTATATAGG 57.599 47.619 8.75 0.00 40.61 2.57
5243 5312 2.745821 TCGATTCGCGCAGTATATAGGT 59.254 45.455 8.75 0.00 40.61 3.08
5244 5313 3.189910 TCGATTCGCGCAGTATATAGGTT 59.810 43.478 8.75 0.00 40.61 3.50
5246 5315 4.384846 CGATTCGCGCAGTATATAGGTTTT 59.615 41.667 8.75 0.00 0.00 2.43
5247 5316 5.570206 CGATTCGCGCAGTATATAGGTTTTA 59.430 40.000 8.75 0.00 0.00 1.52
5248 5317 6.452090 CGATTCGCGCAGTATATAGGTTTTAC 60.452 42.308 8.75 0.00 0.00 2.01
5249 5318 5.443185 TCGCGCAGTATATAGGTTTTACT 57.557 39.130 8.75 0.00 0.00 2.24
5275 5344 8.524870 AGAATATGCATGTTTGTGTTCTTTTC 57.475 30.769 10.16 0.00 0.00 2.29
5285 5354 3.892284 TGTGTTCTTTTCCCTTGCAGTA 58.108 40.909 0.00 0.00 0.00 2.74
5303 5372 1.957877 GTATAGGGTCTTGCGAGCTCT 59.042 52.381 12.85 0.00 37.77 4.09
5344 5413 5.171339 AGTGCATCAAGATGACCTTACTT 57.829 39.130 13.93 0.00 41.20 2.24
5345 5414 5.181748 AGTGCATCAAGATGACCTTACTTC 58.818 41.667 13.93 0.00 41.20 3.01
5346 5415 4.333926 GTGCATCAAGATGACCTTACTTCC 59.666 45.833 13.93 0.00 41.20 3.46
5347 5416 3.557595 GCATCAAGATGACCTTACTTCCG 59.442 47.826 13.93 0.00 41.20 4.30
5348 5417 4.680708 GCATCAAGATGACCTTACTTCCGA 60.681 45.833 13.93 0.00 41.20 4.55
5349 5418 4.451629 TCAAGATGACCTTACTTCCGAC 57.548 45.455 0.00 0.00 32.86 4.79
5350 5419 3.194968 TCAAGATGACCTTACTTCCGACC 59.805 47.826 0.00 0.00 32.86 4.79
5351 5420 2.816411 AGATGACCTTACTTCCGACCA 58.184 47.619 0.00 0.00 0.00 4.02
5367 5444 1.523258 CCATCCGAAGCTGCTCCTG 60.523 63.158 1.00 0.00 0.00 3.86
5369 5446 0.106335 CATCCGAAGCTGCTCCTGAT 59.894 55.000 1.00 0.00 0.00 2.90
5374 5451 2.805099 CCGAAGCTGCTCCTGATAAATC 59.195 50.000 1.00 0.00 0.00 2.17
5379 5456 4.853007 AGCTGCTCCTGATAAATCTTGTT 58.147 39.130 0.00 0.00 0.00 2.83
5420 5497 6.483307 TCATGTTCTTCTCACACGATTTTTCT 59.517 34.615 0.00 0.00 0.00 2.52
5446 5523 1.003051 AGGGTTCGGTGGATAGCCT 59.997 57.895 0.00 0.00 35.07 4.58
5447 5524 0.620700 AGGGTTCGGTGGATAGCCTT 60.621 55.000 0.00 0.00 36.42 4.35
5448 5525 0.255033 GGGTTCGGTGGATAGCCTTT 59.745 55.000 0.00 0.00 34.31 3.11
5449 5526 1.340697 GGGTTCGGTGGATAGCCTTTT 60.341 52.381 0.00 0.00 34.31 2.27
5450 5527 2.014857 GGTTCGGTGGATAGCCTTTTC 58.985 52.381 0.00 0.00 34.31 2.29
5451 5528 2.617021 GGTTCGGTGGATAGCCTTTTCA 60.617 50.000 0.00 0.00 34.31 2.69
5452 5529 3.279434 GTTCGGTGGATAGCCTTTTCAT 58.721 45.455 0.00 0.00 34.31 2.57
5454 5531 4.336889 TCGGTGGATAGCCTTTTCATAG 57.663 45.455 0.00 0.00 34.31 2.23
5457 5541 4.692625 CGGTGGATAGCCTTTTCATAGATG 59.307 45.833 0.00 0.00 34.31 2.90
5465 5549 9.935241 GATAGCCTTTTCATAGATGTCTCATAA 57.065 33.333 0.00 0.00 0.00 1.90
5484 5569 6.361433 TCATAACCTTTTCTTGTGTTCCTGA 58.639 36.000 0.00 0.00 0.00 3.86
5485 5570 6.486657 TCATAACCTTTTCTTGTGTTCCTGAG 59.513 38.462 0.00 0.00 0.00 3.35
5486 5571 2.952310 ACCTTTTCTTGTGTTCCTGAGC 59.048 45.455 0.00 0.00 0.00 4.26
5487 5572 2.951642 CCTTTTCTTGTGTTCCTGAGCA 59.048 45.455 0.00 0.00 0.00 4.26
5488 5573 3.243201 CCTTTTCTTGTGTTCCTGAGCAC 60.243 47.826 7.13 7.13 41.97 4.40
5491 5576 4.436515 TGTGTTCCTGAGCACACG 57.563 55.556 12.04 0.00 45.39 4.49
5492 5577 1.887242 TGTGTTCCTGAGCACACGC 60.887 57.895 12.04 0.00 45.39 5.34
5522 5607 7.849804 ATAGATGTCTTATTTCAAGTTGCGT 57.150 32.000 0.00 0.00 0.00 5.24
5591 5676 1.213926 GAACCATCAGGATTCAGGGCT 59.786 52.381 0.00 0.00 38.69 5.19
5603 5688 5.044846 AGGATTCAGGGCTATTGTTGTAAGT 60.045 40.000 0.00 0.00 0.00 2.24
5614 5699 1.072489 TGTTGTAAGTGCCGAATCCCA 59.928 47.619 0.00 0.00 0.00 4.37
5628 5713 2.332063 ATCCCAATTGTGCTCCTACG 57.668 50.000 4.43 0.00 0.00 3.51
5705 5790 0.736325 AAACGGGCTTCATCGTCGAG 60.736 55.000 0.00 0.00 38.78 4.04
5706 5791 2.278857 CGGGCTTCATCGTCGAGG 60.279 66.667 0.00 0.00 0.00 4.63
5707 5792 2.771639 CGGGCTTCATCGTCGAGGA 61.772 63.158 10.66 10.66 0.00 3.71
5742 5827 2.728383 CGTGTCGACGGCGTCTTT 60.728 61.111 33.90 2.33 42.18 2.52
5744 5829 1.659335 GTGTCGACGGCGTCTTTCA 60.659 57.895 33.90 25.49 38.98 2.69
5745 5830 1.066093 TGTCGACGGCGTCTTTCAA 59.934 52.632 33.90 14.69 38.98 2.69
5748 5833 1.952133 CGACGGCGTCTTTCAACCA 60.952 57.895 33.90 0.00 0.00 3.67
5754 5839 1.133025 GGCGTCTTTCAACCATCCATG 59.867 52.381 0.00 0.00 0.00 3.66
5783 5871 1.451387 CGTTACCCCACATGCCCTC 60.451 63.158 0.00 0.00 0.00 4.30
5795 5883 3.009714 GCCCTCTCCCGGTCCTTT 61.010 66.667 0.00 0.00 0.00 3.11
5808 5896 2.331809 GTCCTTTGACCGATGTTTGC 57.668 50.000 0.00 0.00 35.34 3.68
5815 5903 1.606668 TGACCGATGTTTGCCTTTGTC 59.393 47.619 0.00 0.00 0.00 3.18
5817 5905 3.071479 GACCGATGTTTGCCTTTGTCTA 58.929 45.455 0.00 0.00 0.00 2.59
5870 5958 1.308069 ACATGATCAACCCAGCGTGC 61.308 55.000 0.00 0.00 0.00 5.34
5875 5963 1.296056 ATCAACCCAGCGTGCGTAAC 61.296 55.000 0.00 0.00 0.00 2.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
553 554 6.153851 TCCGACAAATACTACAGGATTCTCAA 59.846 38.462 0.00 0.00 0.00 3.02
554 555 5.655090 TCCGACAAATACTACAGGATTCTCA 59.345 40.000 0.00 0.00 0.00 3.27
555 556 6.145338 TCCGACAAATACTACAGGATTCTC 57.855 41.667 0.00 0.00 0.00 2.87
556 557 6.540438 TTCCGACAAATACTACAGGATTCT 57.460 37.500 0.00 0.00 0.00 2.40
557 558 6.202954 CCATTCCGACAAATACTACAGGATTC 59.797 42.308 0.00 0.00 0.00 2.52
558 559 6.055588 CCATTCCGACAAATACTACAGGATT 58.944 40.000 0.00 0.00 0.00 3.01
559 560 5.365605 TCCATTCCGACAAATACTACAGGAT 59.634 40.000 0.00 0.00 0.00 3.24
560 561 4.712829 TCCATTCCGACAAATACTACAGGA 59.287 41.667 0.00 0.00 0.00 3.86
561 562 5.018539 TCCATTCCGACAAATACTACAGG 57.981 43.478 0.00 0.00 0.00 4.00
562 563 5.050490 CCTCCATTCCGACAAATACTACAG 58.950 45.833 0.00 0.00 0.00 2.74
563 564 4.682320 GCCTCCATTCCGACAAATACTACA 60.682 45.833 0.00 0.00 0.00 2.74
564 565 3.808174 GCCTCCATTCCGACAAATACTAC 59.192 47.826 0.00 0.00 0.00 2.73
565 566 3.491964 CGCCTCCATTCCGACAAATACTA 60.492 47.826 0.00 0.00 0.00 1.82
566 567 2.741878 CGCCTCCATTCCGACAAATACT 60.742 50.000 0.00 0.00 0.00 2.12
567 568 1.597663 CGCCTCCATTCCGACAAATAC 59.402 52.381 0.00 0.00 0.00 1.89
568 569 1.948104 CGCCTCCATTCCGACAAATA 58.052 50.000 0.00 0.00 0.00 1.40
569 570 1.376609 GCGCCTCCATTCCGACAAAT 61.377 55.000 0.00 0.00 0.00 2.32
570 571 2.038269 GCGCCTCCATTCCGACAAA 61.038 57.895 0.00 0.00 0.00 2.83
620 621 2.419620 GGCCCACCAAAAACACCG 59.580 61.111 0.00 0.00 35.26 4.94
638 639 7.630082 GCTTCTTTCTGATGCTTTGGATAACAT 60.630 37.037 0.00 0.00 41.11 2.71
886 895 2.189521 CCCCACGAATTCTCCCGG 59.810 66.667 3.52 0.00 0.00 5.73
888 897 0.909623 TTCTCCCCACGAATTCTCCC 59.090 55.000 3.52 0.00 0.00 4.30
896 905 2.291043 GCCTTCCTTCTCCCCACGA 61.291 63.158 0.00 0.00 0.00 4.35
899 908 3.009115 CCGCCTTCCTTCTCCCCA 61.009 66.667 0.00 0.00 0.00 4.96
1079 1088 2.743928 CTGTGCCGTTCTGGAGCC 60.744 66.667 0.00 0.00 42.00 4.70
1125 1134 3.214328 GAGCTGGAAGTGGTTGAAAAGA 58.786 45.455 0.00 0.00 35.30 2.52
1126 1135 2.031682 CGAGCTGGAAGTGGTTGAAAAG 60.032 50.000 0.00 0.00 35.30 2.27
1218 1227 2.278330 CCTTTCAGCAAGGCCCCAC 61.278 63.158 0.00 0.00 46.18 4.61
1219 1228 2.118076 CCTTTCAGCAAGGCCCCA 59.882 61.111 0.00 0.00 46.18 4.96
1229 1238 3.673809 GTGTAGTAGCGTTCACCTTTCAG 59.326 47.826 0.00 0.00 0.00 3.02
1231 1240 3.427863 GTGTGTAGTAGCGTTCACCTTTC 59.572 47.826 0.00 0.00 0.00 2.62
1232 1241 3.069158 AGTGTGTAGTAGCGTTCACCTTT 59.931 43.478 0.00 0.00 0.00 3.11
1234 1243 2.030185 CAGTGTGTAGTAGCGTTCACCT 60.030 50.000 0.00 0.00 0.00 4.00
1245 1254 2.110188 TCTCTCTTCCCCAGTGTGTAGT 59.890 50.000 0.00 0.00 0.00 2.73
1252 1261 0.178891 TGCCTTCTCTCTTCCCCAGT 60.179 55.000 0.00 0.00 0.00 4.00
1272 1281 0.109412 GGCTGAATTGCACACAGAGC 60.109 55.000 15.21 6.73 34.07 4.09
1292 1301 1.222936 CCTCTGAAGCTCCGGCAAT 59.777 57.895 0.00 0.00 41.70 3.56
1313 1322 1.153429 GCTCCGCACTAAATCCGGT 60.153 57.895 0.00 0.00 42.48 5.28
1336 1345 1.622607 CCTCGCACTCACCCCCAATA 61.623 60.000 0.00 0.00 0.00 1.90
1344 1353 1.079543 ACATCAGCCTCGCACTCAC 60.080 57.895 0.00 0.00 0.00 3.51
1346 1355 1.520342 GGACATCAGCCTCGCACTC 60.520 63.158 0.00 0.00 0.00 3.51
1379 1388 1.149782 TTCCCAATACCAGGGCCCAA 61.150 55.000 27.56 6.58 46.36 4.12
1406 1415 5.695851 AAAATGAAAGAGCACTTCGACAT 57.304 34.783 0.00 1.74 35.05 3.06
1411 1420 6.197842 CACTGTCAAAAATGAAAGAGCACTTC 59.802 38.462 3.11 0.00 35.05 3.01
1471 1480 5.337571 CCAGAGACCAAGCTTAAGTACATCA 60.338 44.000 0.00 0.00 0.00 3.07
1477 1486 1.981495 AGCCAGAGACCAAGCTTAAGT 59.019 47.619 0.00 0.00 29.27 2.24
1733 1742 2.008329 GTCATCCAGCAAGAGAAGCAG 58.992 52.381 0.00 0.00 0.00 4.24
1765 1774 0.452184 ACAGTCTACTCGCATCGGTG 59.548 55.000 0.00 0.00 0.00 4.94
1850 1859 1.476085 CAAACACTTGGACCTTGCACA 59.524 47.619 0.00 0.00 0.00 4.57
2133 2147 5.684704 TCATATCACCAATGTCCTTCTTCC 58.315 41.667 0.00 0.00 0.00 3.46
2509 2523 6.346096 TGCCAGAAGTATCCTGTATGTTAAC 58.654 40.000 0.00 0.00 0.00 2.01
2835 2849 1.246056 ATTGCCTTGCTGACACGCAT 61.246 50.000 1.27 0.00 40.04 4.73
3019 3033 6.390987 ACGACTAAATTTAGAGTTTGAGCG 57.609 37.500 27.92 18.25 34.84 5.03
3066 3080 2.157668 ACTAATTTTGCACGAGCTGACG 59.842 45.455 6.36 0.00 42.74 4.35
3081 3095 8.934023 TCTGAATAACCTGTCCAAAACTAATT 57.066 30.769 0.00 0.00 0.00 1.40
3109 3123 0.529378 CTTGATTGACTGGCAAGCCC 59.471 55.000 9.29 0.00 42.10 5.19
3244 3258 2.027192 GCACAAGTGACTAATGAGGGGA 60.027 50.000 4.04 0.00 0.00 4.81
3253 3267 2.107378 TCCCCATTTGCACAAGTGACTA 59.893 45.455 4.04 0.00 30.67 2.59
3306 3320 1.322538 TGGATAGCAGTCGAGCAGCA 61.323 55.000 0.00 0.00 36.85 4.41
3439 3453 4.391830 GCCACATTAAGAATCAGTGAACGA 59.608 41.667 0.00 0.00 32.14 3.85
3521 3535 9.831737 CAGATCCGATATTTTGATTTCATTACC 57.168 33.333 0.00 0.00 0.00 2.85
3527 3541 9.665264 GGTAAACAGATCCGATATTTTGATTTC 57.335 33.333 0.00 0.00 0.00 2.17
3536 3550 3.971305 TGGTGGGTAAACAGATCCGATAT 59.029 43.478 0.00 0.00 0.00 1.63
3545 3559 3.742433 TGCAAATTGGTGGGTAAACAG 57.258 42.857 0.00 0.00 0.00 3.16
3582 3596 0.310543 GCACCGTTCTGCATCAAACA 59.689 50.000 0.00 0.00 37.11 2.83
3598 3612 2.143925 GACTGTACCAAGTCCTTGCAC 58.856 52.381 1.40 3.01 40.66 4.57
3729 3743 6.884280 ACTTGACACTTAATTTCTTCCCTG 57.116 37.500 0.00 0.00 0.00 4.45
3747 3761 6.009589 TGAAGGATGGAATTTAGCAACTTGA 58.990 36.000 0.00 0.00 0.00 3.02
3751 3765 5.447818 CGACTGAAGGATGGAATTTAGCAAC 60.448 44.000 0.00 0.00 0.00 4.17
4014 4031 6.953520 ACCTTTCATATCCTTCAACAAATCCA 59.046 34.615 0.00 0.00 0.00 3.41
4111 4128 4.260375 GCATCAAGCATAGTAACTGAACGG 60.260 45.833 0.00 0.00 44.79 4.44
4164 4181 3.651803 ATACTATTCTGAGACTGCGGC 57.348 47.619 0.00 0.00 0.00 6.53
4199 4216 3.556423 GCTTTCTCGAGGTTCCCTAACAA 60.556 47.826 13.56 0.00 37.34 2.83
4238 4255 2.242965 TCCATTCACTGCCCTCAATCAT 59.757 45.455 0.00 0.00 0.00 2.45
4254 4271 5.716228 TCAATGACTAAACCATGCTTCCATT 59.284 36.000 0.00 0.00 0.00 3.16
4364 4381 9.708222 CACATCAAAACTAATGTAAGATGTAGC 57.292 33.333 0.00 0.00 38.64 3.58
4413 4430 1.001974 CAGACATTTCCACGTCTCCCA 59.998 52.381 0.00 0.00 40.50 4.37
4480 4497 8.863872 TGTATATGATAGAGCTGTAACTAGCA 57.136 34.615 0.00 0.00 46.07 3.49
4588 4605 1.773054 GCATGAGCGCATCACAGGAG 61.773 60.000 11.47 1.31 41.91 3.69
4618 4635 1.073199 ACTGGTTCTTCCCAAGGCG 59.927 57.895 0.00 0.00 33.07 5.52
4622 4639 0.534203 GCGTCACTGGTTCTTCCCAA 60.534 55.000 0.00 0.00 33.07 4.12
4708 4725 7.839907 TGTTACACCTACGGTAGTTATCAAAT 58.160 34.615 13.76 0.00 32.11 2.32
4784 4801 2.233271 CTGCATCTCAAAGTTGGGTGT 58.767 47.619 0.00 0.00 0.00 4.16
4785 4802 2.030540 CACTGCATCTCAAAGTTGGGTG 60.031 50.000 0.00 0.00 0.00 4.61
4831 4848 5.362430 ACATCCTTCAGTCTTCCTATCAGTC 59.638 44.000 0.00 0.00 0.00 3.51
4854 4871 7.923414 AGGTTTGATAAGATAGGTTGTTCAC 57.077 36.000 0.00 0.00 0.00 3.18
4867 4884 9.177608 TCACTGGATGAAATAAGGTTTGATAAG 57.822 33.333 0.00 0.00 33.02 1.73
4892 4909 7.032598 TCCTATTATCCTTCATGGGGAATTC 57.967 40.000 11.29 0.00 36.37 2.17
4927 4944 5.985530 GGCTATATCTTTGCATGGGAAAAAC 59.014 40.000 0.00 0.00 0.00 2.43
4983 5000 1.776662 CATCCACTTCGTAGGAGGGA 58.223 55.000 0.00 2.85 37.34 4.20
5053 5104 4.225267 ACCCACTATTCCACTTCTACAAGG 59.775 45.833 0.00 0.00 33.37 3.61
5069 5121 6.687901 GCTCAATGTCCATGTATTACCCACTA 60.688 42.308 0.00 0.00 0.00 2.74
5076 5128 4.136796 GCTGGCTCAATGTCCATGTATTA 58.863 43.478 0.00 0.00 0.00 0.98
5096 5148 2.191128 ACAGAAAGAGATTTGCCGCT 57.809 45.000 0.00 0.00 0.00 5.52
5098 5150 4.656041 GATGAACAGAAAGAGATTTGCCG 58.344 43.478 0.00 0.00 0.00 5.69
5240 5309 9.243105 ACAAACATGCATATTCTAGTAAAACCT 57.757 29.630 0.00 0.00 0.00 3.50
5241 5310 9.289303 CACAAACATGCATATTCTAGTAAAACC 57.711 33.333 0.00 0.00 0.00 3.27
5242 5311 9.840427 ACACAAACATGCATATTCTAGTAAAAC 57.160 29.630 0.00 0.00 0.00 2.43
5246 5315 9.448438 AAGAACACAAACATGCATATTCTAGTA 57.552 29.630 0.00 0.00 0.00 1.82
5247 5316 7.928307 AGAACACAAACATGCATATTCTAGT 57.072 32.000 0.00 0.00 0.00 2.57
5248 5317 9.630098 AAAAGAACACAAACATGCATATTCTAG 57.370 29.630 0.00 0.00 0.00 2.43
5249 5318 9.624697 GAAAAGAACACAAACATGCATATTCTA 57.375 29.630 0.00 0.00 0.00 2.10
5261 5330 3.855858 TGCAAGGGAAAAGAACACAAAC 58.144 40.909 0.00 0.00 0.00 2.93
5262 5331 3.513515 ACTGCAAGGGAAAAGAACACAAA 59.486 39.130 0.00 0.00 39.30 2.83
5285 5354 0.749649 CAGAGCTCGCAAGACCCTAT 59.250 55.000 8.37 0.00 45.01 2.57
5303 5372 4.067896 CACTTCCTTTTTCTCTAGCTGCA 58.932 43.478 1.02 0.00 0.00 4.41
5319 5388 2.996631 AGGTCATCTTGATGCACTTCC 58.003 47.619 5.78 4.04 0.00 3.46
5344 5413 2.892640 CAGCTTCGGATGGTCGGA 59.107 61.111 0.00 0.00 0.00 4.55
5345 5414 2.892425 GCAGCTTCGGATGGTCGG 60.892 66.667 0.00 0.00 0.00 4.79
5346 5415 1.880340 GAGCAGCTTCGGATGGTCG 60.880 63.158 0.00 0.00 46.23 4.79
5348 5417 1.992277 AGGAGCAGCTTCGGATGGT 60.992 57.895 0.00 0.00 45.04 3.55
5349 5418 1.523258 CAGGAGCAGCTTCGGATGG 60.523 63.158 0.00 0.00 0.00 3.51
5350 5419 0.106335 ATCAGGAGCAGCTTCGGATG 59.894 55.000 15.07 0.00 0.00 3.51
5351 5420 1.709578 TATCAGGAGCAGCTTCGGAT 58.290 50.000 19.14 19.14 0.00 4.18
5374 5451 7.964559 ACATGAACGATATCAAATCACAACAAG 59.035 33.333 0.00 0.00 32.06 3.16
5379 5456 7.848223 AGAACATGAACGATATCAAATCACA 57.152 32.000 0.00 0.00 32.06 3.58
5393 5470 5.597813 AATCGTGTGAGAAGAACATGAAC 57.402 39.130 0.00 0.00 44.45 3.18
5394 5471 6.618287 AAAATCGTGTGAGAAGAACATGAA 57.382 33.333 0.00 0.00 44.45 2.57
5420 5497 2.455557 TCCACCGAACCCTCGTATAAA 58.544 47.619 0.00 0.00 43.87 1.40
5426 5503 1.067582 GCTATCCACCGAACCCTCG 59.932 63.158 0.00 0.00 45.02 4.63
5449 5526 9.605275 CAAGAAAAGGTTATGAGACATCTATGA 57.395 33.333 0.00 0.00 0.00 2.15
5450 5527 9.388506 ACAAGAAAAGGTTATGAGACATCTATG 57.611 33.333 0.00 0.00 0.00 2.23
5451 5528 9.388506 CACAAGAAAAGGTTATGAGACATCTAT 57.611 33.333 0.00 0.00 0.00 1.98
5452 5529 8.375506 ACACAAGAAAAGGTTATGAGACATCTA 58.624 33.333 0.00 0.00 0.00 1.98
5454 5531 7.440523 ACACAAGAAAAGGTTATGAGACATC 57.559 36.000 0.00 0.00 0.00 3.06
5457 5541 6.486993 AGGAACACAAGAAAAGGTTATGAGAC 59.513 38.462 0.00 0.00 0.00 3.36
5465 5549 2.952310 GCTCAGGAACACAAGAAAAGGT 59.048 45.455 0.00 0.00 0.00 3.50
5485 5570 3.865745 AGACATCTATTAACAGCGTGTGC 59.134 43.478 0.00 0.00 43.24 4.57
5486 5571 7.700322 ATAAGACATCTATTAACAGCGTGTG 57.300 36.000 0.00 0.00 0.00 3.82
5487 5572 8.718102 AAATAAGACATCTATTAACAGCGTGT 57.282 30.769 0.00 0.00 0.00 4.49
5488 5573 8.817100 TGAAATAAGACATCTATTAACAGCGTG 58.183 33.333 0.00 0.00 0.00 5.34
5489 5574 8.942338 TGAAATAAGACATCTATTAACAGCGT 57.058 30.769 0.00 0.00 0.00 5.07
5490 5575 9.855361 CTTGAAATAAGACATCTATTAACAGCG 57.145 33.333 0.00 0.00 0.00 5.18
5520 5605 5.911421 TGTGATCAGACGAAAACAATAACG 58.089 37.500 0.00 0.00 0.00 3.18
5522 5607 7.802720 CACAATGTGATCAGACGAAAACAATAA 59.197 33.333 7.78 0.00 35.23 1.40
5591 5676 3.942748 GGGATTCGGCACTTACAACAATA 59.057 43.478 0.00 0.00 0.00 1.90
5603 5688 0.611618 AGCACAATTGGGATTCGGCA 60.612 50.000 13.13 0.00 0.00 5.69
5614 5699 1.026718 GGCAGCGTAGGAGCACAATT 61.027 55.000 0.00 0.00 40.15 2.32
5628 5713 0.036010 ACATGACCTAGTGTGGCAGC 60.036 55.000 0.00 0.00 0.00 5.25
5706 5791 4.374702 CACCAGCGTTGCAGCGTC 62.375 66.667 23.96 15.78 43.00 5.19
5748 5833 3.010144 GGGCAGTGGACCATGGAT 58.990 61.111 21.47 1.98 44.16 3.41
5754 5839 2.046604 GGTAACGGGCAGTGGACC 60.047 66.667 6.40 6.40 39.68 4.46
5795 5883 1.606668 GACAAAGGCAAACATCGGTCA 59.393 47.619 0.00 0.00 0.00 4.02
5808 5896 8.558973 ACATGAAGAGAAAGATTAGACAAAGG 57.441 34.615 0.00 0.00 0.00 3.11
5817 5905 9.342308 TCACAAGTTAACATGAAGAGAAAGATT 57.658 29.630 17.18 0.00 0.00 2.40
5854 5942 2.161078 TACGCACGCTGGGTTGATCA 62.161 55.000 11.59 0.00 40.90 2.92
5870 5958 3.378339 AGACTCAAAACAGGACGTTACG 58.622 45.455 2.19 2.19 36.59 3.18
5875 5963 2.996621 GGATGAGACTCAAAACAGGACG 59.003 50.000 9.70 0.00 0.00 4.79
5881 5969 5.695851 ACACATTGGATGAGACTCAAAAC 57.304 39.130 9.70 3.50 0.00 2.43
5885 5973 4.356405 ACAACACATTGGATGAGACTCA 57.644 40.909 7.80 7.80 40.42 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.