Multiple sequence alignment - TraesCS4B01G276700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G276700 chr4B 100.000 7305 0 0 1 7305 558043171 558050475 0.000000e+00 13490.0
1 TraesCS4B01G276700 chr4B 81.875 160 28 1 2082 2240 535047259 535047418 4.600000e-27 134.0
2 TraesCS4B01G276700 chr4D 89.528 3810 178 92 227 3923 446136554 446140255 0.000000e+00 4621.0
3 TraesCS4B01G276700 chr4D 92.938 1416 57 30 4531 5916 446140734 446142136 0.000000e+00 2021.0
4 TraesCS4B01G276700 chr4D 92.744 634 34 6 5915 6538 446142168 446142799 0.000000e+00 905.0
5 TraesCS4B01G276700 chr4D 89.883 514 25 14 3964 4469 446140252 446140746 2.870000e-178 636.0
6 TraesCS4B01G276700 chr4D 97.122 278 8 0 7028 7305 446143325 446143602 3.090000e-128 470.0
7 TraesCS4B01G276700 chr4D 82.432 444 49 20 6611 7028 446142840 446143280 1.940000e-95 361.0
8 TraesCS4B01G276700 chr4D 79.553 313 34 24 5809 6105 439127302 439127600 5.780000e-46 196.0
9 TraesCS4B01G276700 chr4D 88.889 153 8 7 50 198 446136241 446136388 5.820000e-41 180.0
10 TraesCS4B01G276700 chr4A 86.339 3887 216 122 210 3924 21221282 21217539 0.000000e+00 3945.0
11 TraesCS4B01G276700 chr4A 91.191 2032 98 48 4531 6526 21217041 21215055 0.000000e+00 2686.0
12 TraesCS4B01G276700 chr4A 90.173 519 31 13 3969 4469 21217545 21217029 0.000000e+00 658.0
13 TraesCS4B01G276700 chr4A 89.700 466 30 12 6567 7028 21215066 21214615 4.910000e-161 579.0
14 TraesCS4B01G276700 chr4A 96.043 278 11 0 7028 7305 21214570 21214293 3.110000e-123 453.0
15 TraesCS4B01G276700 chr4A 77.070 314 43 20 5807 6105 522975528 522975827 3.530000e-33 154.0
16 TraesCS4B01G276700 chr4A 91.176 68 4 2 1414 1481 665628200 665628135 2.810000e-14 91.6
17 TraesCS4B01G276700 chr1B 81.786 560 78 16 5496 6039 213595236 213595787 1.450000e-121 448.0
18 TraesCS4B01G276700 chr1B 78.277 267 43 9 7032 7296 242668525 242668272 2.730000e-34 158.0
19 TraesCS4B01G276700 chr1D 81.655 556 82 15 5496 6039 138199225 138198678 1.870000e-120 444.0
20 TraesCS4B01G276700 chr1D 85.093 161 23 1 7137 7296 176353378 176353218 5.860000e-36 163.0
21 TraesCS4B01G276700 chr1A 80.680 559 84 18 5496 6039 153579809 153579260 5.270000e-111 412.0
22 TraesCS4B01G276700 chr1A 83.851 161 25 1 7137 7296 232074548 232074388 1.270000e-32 152.0
23 TraesCS4B01G276700 chr1A 81.325 166 24 7 1227 1386 525189144 525189308 2.140000e-25 128.0
24 TraesCS4B01G276700 chr1A 93.478 46 3 0 3922 3967 405482938 405482893 1.320000e-07 69.4
25 TraesCS4B01G276700 chrUn 79.046 482 65 29 5645 6105 27575680 27575214 1.540000e-76 298.0
26 TraesCS4B01G276700 chr5D 88.235 170 15 2 7039 7203 432930039 432929870 1.610000e-46 198.0
27 TraesCS4B01G276700 chr6D 85.714 182 25 1 2096 2277 381524778 381524598 2.690000e-44 191.0
28 TraesCS4B01G276700 chr6A 85.165 182 26 1 2096 2277 522743357 522743177 1.250000e-42 185.0
29 TraesCS4B01G276700 chr6A 95.455 44 2 0 3925 3968 91866707 91866664 3.660000e-08 71.3
30 TraesCS4B01G276700 chr3D 80.591 237 39 7 1235 1469 397213427 397213196 7.530000e-40 176.0
31 TraesCS4B01G276700 chr3D 77.064 327 44 24 5795 6106 209693148 209693458 7.590000e-35 159.0
32 TraesCS4B01G276700 chr3D 92.000 50 3 1 3918 3967 522776921 522776969 1.320000e-07 69.4
33 TraesCS4B01G276700 chr3D 90.196 51 5 0 3925 3975 300930610 300930560 4.730000e-07 67.6
34 TraesCS4B01G276700 chr3B 80.591 237 39 7 1235 1469 523156901 523156670 7.530000e-40 176.0
35 TraesCS4B01G276700 chr3A 80.672 238 37 9 1235 1469 516806112 516805881 7.530000e-40 176.0
36 TraesCS4B01G276700 chr2B 77.564 312 46 19 5807 6105 23319429 23319129 4.530000e-37 167.0
37 TraesCS4B01G276700 chr2B 80.349 229 38 6 1590 1814 731890691 731890916 4.530000e-37 167.0
38 TraesCS4B01G276700 chr2B 80.723 166 25 6 1227 1386 175532044 175532208 9.950000e-24 122.0
39 TraesCS4B01G276700 chr2B 93.478 46 3 0 3922 3967 547853907 547853862 1.320000e-07 69.4
40 TraesCS4B01G276700 chr2A 80.531 226 37 6 1592 1813 734887682 734887904 4.530000e-37 167.0
41 TraesCS4B01G276700 chr2A 76.410 195 34 11 1232 1422 734887093 734887279 2.170000e-15 95.3
42 TraesCS4B01G276700 chr2D 80.645 217 36 5 1590 1803 601597298 601597511 5.860000e-36 163.0
43 TraesCS4B01G276700 chr2D 76.994 326 44 24 5795 6105 111157524 111157215 2.730000e-34 158.0
44 TraesCS4B01G276700 chr2D 80.240 167 21 9 1227 1386 179348246 179348085 1.670000e-21 115.0
45 TraesCS4B01G276700 chr2D 76.562 192 32 12 1232 1418 601596671 601596854 7.800000e-15 93.5
46 TraesCS4B01G276700 chr2D 95.556 45 2 0 3923 3967 45122083 45122039 1.020000e-08 73.1
47 TraesCS4B01G276700 chr6B 81.868 182 32 1 2096 2277 570140291 570140111 1.270000e-32 152.0
48 TraesCS4B01G276700 chr7B 80.240 167 22 8 1227 1386 648148400 648148562 1.670000e-21 115.0
49 TraesCS4B01G276700 chr7B 78.409 176 36 2 2084 2258 59281792 59281618 5.990000e-21 113.0
50 TraesCS4B01G276700 chr5B 92.208 77 5 1 7041 7117 526255875 526255800 2.790000e-19 108.0
51 TraesCS4B01G276700 chr5B 93.478 46 3 0 3922 3967 470395514 470395559 1.320000e-07 69.4
52 TraesCS4B01G276700 chr5A 86.957 92 9 3 6015 6105 574330669 574330758 4.660000e-17 100.0
53 TraesCS4B01G276700 chr7A 95.000 60 3 0 1413 1472 53907075 53907134 2.170000e-15 95.3
54 TraesCS4B01G276700 chr7A 88.333 60 7 0 3922 3981 140535853 140535912 1.020000e-08 73.1
55 TraesCS4B01G276700 chr7A 93.617 47 3 0 3922 3968 672060874 672060920 3.660000e-08 71.3
56 TraesCS4B01G276700 chr7A 87.719 57 7 0 5731 5787 158303504 158303560 4.730000e-07 67.6
57 TraesCS4B01G276700 chr7D 96.364 55 2 0 1414 1468 51429140 51429194 2.810000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G276700 chr4B 558043171 558050475 7304 False 13490.000000 13490 100.000000 1 7305 1 chr4B.!!$F2 7304
1 TraesCS4B01G276700 chr4D 446136241 446143602 7361 False 1313.428571 4621 90.505143 50 7305 7 chr4D.!!$F2 7255
2 TraesCS4B01G276700 chr4A 21214293 21221282 6989 True 1664.200000 3945 90.689200 210 7305 5 chr4A.!!$R2 7095
3 TraesCS4B01G276700 chr1B 213595236 213595787 551 False 448.000000 448 81.786000 5496 6039 1 chr1B.!!$F1 543
4 TraesCS4B01G276700 chr1D 138198678 138199225 547 True 444.000000 444 81.655000 5496 6039 1 chr1D.!!$R1 543
5 TraesCS4B01G276700 chr1A 153579260 153579809 549 True 412.000000 412 80.680000 5496 6039 1 chr1A.!!$R1 543

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
29 30 0.107214 AACGAGTGGGTATGCATGGG 60.107 55.0 10.16 0.0 0.00 4.00 F
56 57 0.108567 TAGCTTCATAACGGCGCACA 60.109 50.0 10.83 0.0 0.00 4.57 F
1086 1277 0.523125 CCAAACACAGCACACACACG 60.523 55.0 0.00 0.0 0.00 4.49 F
1513 1736 0.678395 TGTTGCCATTGCCGATTTGT 59.322 45.0 0.00 0.0 36.33 2.83 F
3151 3499 0.036010 CCATTTCGCCTCTCCAGTGT 60.036 55.0 0.00 0.0 0.00 3.55 F
3155 3503 0.039180 TTCGCCTCTCCAGTGTAGGA 59.961 55.0 7.43 0.0 36.00 2.94 F
3489 3852 0.109319 CTAACCCCATTTGTGCACGC 60.109 55.0 13.13 0.0 0.00 5.34 F
4263 4680 0.247736 CAAGCTCCACTAACCGCTCT 59.752 55.0 0.00 0.0 31.30 4.09 F
5699 6165 0.175073 GGATGGACCAGTACACGACC 59.825 60.0 0.00 0.0 38.79 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1312 1535 0.903236 AGGAACGGGAAGAAGTAGCC 59.097 55.000 0.00 0.00 0.00 3.93 R
1579 1802 1.442857 GAGTCTGCAGTCGGTCACG 60.443 63.158 14.67 0.00 42.74 4.35 R
2378 2680 0.622665 ATGGGCTCTTGGAGTTGGAG 59.377 55.000 0.00 0.00 31.39 3.86 R
3278 3635 0.325933 TGGCGATCCATGGATCCATC 59.674 55.000 37.70 28.54 45.95 3.51 R
4929 5368 0.033504 AAACGGCGTCAGTCAGTCAT 59.966 50.000 15.17 0.00 0.00 3.06 R
4931 5370 0.232303 CAAAACGGCGTCAGTCAGTC 59.768 55.000 15.17 0.00 0.00 3.51 R
5115 5562 0.802494 AATTTACTTCGGTGCAGCGG 59.198 50.000 34.92 23.30 0.00 5.52 R
6083 6612 0.107643 TCAGCCATGGTTCGTGACAA 59.892 50.000 14.67 0.00 0.00 3.18 R
6544 7083 0.036732 GCCAATGGACAGACACCTGA 59.963 55.000 2.05 0.00 43.02 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.721466 CCGAAACGAAAACGAGTGG 57.279 52.632 0.00 0.00 0.00 4.00
19 20 0.233848 CCGAAACGAAAACGAGTGGG 59.766 55.000 0.00 0.00 0.00 4.61
20 21 0.932399 CGAAACGAAAACGAGTGGGT 59.068 50.000 0.00 0.00 0.00 4.51
21 22 2.126467 CGAAACGAAAACGAGTGGGTA 58.874 47.619 0.00 0.00 0.00 3.69
22 23 2.733026 CGAAACGAAAACGAGTGGGTAT 59.267 45.455 0.00 0.00 0.00 2.73
23 24 3.422603 CGAAACGAAAACGAGTGGGTATG 60.423 47.826 0.00 0.00 0.00 2.39
24 25 1.435577 ACGAAAACGAGTGGGTATGC 58.564 50.000 0.00 0.00 0.00 3.14
25 26 1.270412 ACGAAAACGAGTGGGTATGCA 60.270 47.619 0.00 0.00 0.00 3.96
26 27 2.006888 CGAAAACGAGTGGGTATGCAT 58.993 47.619 3.79 3.79 0.00 3.96
27 28 2.223021 CGAAAACGAGTGGGTATGCATG 60.223 50.000 10.16 0.00 0.00 4.06
28 29 1.750193 AAACGAGTGGGTATGCATGG 58.250 50.000 10.16 0.00 0.00 3.66
29 30 0.107214 AACGAGTGGGTATGCATGGG 60.107 55.000 10.16 0.00 0.00 4.00
30 31 1.271840 ACGAGTGGGTATGCATGGGT 61.272 55.000 10.16 0.00 0.00 4.51
31 32 0.756294 CGAGTGGGTATGCATGGGTA 59.244 55.000 10.16 0.00 0.00 3.69
32 33 1.140052 CGAGTGGGTATGCATGGGTAA 59.860 52.381 10.16 0.00 0.00 2.85
33 34 2.224523 CGAGTGGGTATGCATGGGTAAT 60.225 50.000 10.16 0.00 0.00 1.89
34 35 3.149196 GAGTGGGTATGCATGGGTAATG 58.851 50.000 10.16 0.00 39.49 1.90
35 36 2.158475 AGTGGGTATGCATGGGTAATGG 60.158 50.000 10.16 0.00 36.71 3.16
36 37 1.146774 TGGGTATGCATGGGTAATGGG 59.853 52.381 10.16 0.00 36.71 4.00
37 38 1.146982 GGGTATGCATGGGTAATGGGT 59.853 52.381 10.16 0.00 36.71 4.51
38 39 2.377193 GGGTATGCATGGGTAATGGGTA 59.623 50.000 10.16 0.00 36.71 3.69
39 40 3.561313 GGGTATGCATGGGTAATGGGTAG 60.561 52.174 10.16 0.00 36.71 3.18
40 41 2.292828 ATGCATGGGTAATGGGTAGC 57.707 50.000 0.00 0.00 36.71 3.58
41 42 1.221635 TGCATGGGTAATGGGTAGCT 58.778 50.000 0.00 0.00 36.71 3.32
42 43 1.568597 TGCATGGGTAATGGGTAGCTT 59.431 47.619 0.00 0.00 36.71 3.74
43 44 2.230660 GCATGGGTAATGGGTAGCTTC 58.769 52.381 0.00 0.00 36.71 3.86
44 45 2.422803 GCATGGGTAATGGGTAGCTTCA 60.423 50.000 0.00 0.00 36.71 3.02
45 46 3.751893 GCATGGGTAATGGGTAGCTTCAT 60.752 47.826 0.00 0.00 36.71 2.57
46 47 4.506625 GCATGGGTAATGGGTAGCTTCATA 60.507 45.833 0.00 0.00 36.71 2.15
47 48 5.630121 CATGGGTAATGGGTAGCTTCATAA 58.370 41.667 0.00 0.00 32.10 1.90
48 49 5.043737 TGGGTAATGGGTAGCTTCATAAC 57.956 43.478 0.00 0.00 0.00 1.89
49 50 4.062991 GGGTAATGGGTAGCTTCATAACG 58.937 47.826 0.00 0.00 0.00 3.18
50 51 4.062991 GGTAATGGGTAGCTTCATAACGG 58.937 47.826 0.00 0.00 0.00 4.44
51 52 2.256117 ATGGGTAGCTTCATAACGGC 57.744 50.000 0.00 0.00 0.00 5.68
52 53 0.179094 TGGGTAGCTTCATAACGGCG 60.179 55.000 4.80 4.80 0.00 6.46
53 54 1.496403 GGGTAGCTTCATAACGGCGC 61.496 60.000 6.90 0.00 0.00 6.53
54 55 0.808453 GGTAGCTTCATAACGGCGCA 60.808 55.000 10.83 0.00 0.00 6.09
55 56 0.300789 GTAGCTTCATAACGGCGCAC 59.699 55.000 10.83 0.00 0.00 5.34
56 57 0.108567 TAGCTTCATAACGGCGCACA 60.109 50.000 10.83 0.00 0.00 4.57
57 58 1.226018 GCTTCATAACGGCGCACAC 60.226 57.895 10.83 0.00 0.00 3.82
58 59 1.058748 CTTCATAACGGCGCACACG 59.941 57.895 10.83 6.32 44.07 4.49
94 95 4.761235 CCTGTCGGCTACTCGATTAATA 57.239 45.455 0.00 0.00 41.40 0.98
185 187 2.509569 TCTGGGAGAGATGCGATACTC 58.490 52.381 0.00 0.00 0.00 2.59
186 188 2.107378 TCTGGGAGAGATGCGATACTCT 59.893 50.000 0.00 0.00 44.68 3.24
187 189 2.228582 CTGGGAGAGATGCGATACTCTG 59.771 54.545 9.65 0.00 42.51 3.35
188 190 1.067915 GGGAGAGATGCGATACTCTGC 60.068 57.143 13.10 13.10 45.97 4.26
194 206 4.157656 AGAGATGCGATACTCTGCCTAATC 59.842 45.833 0.00 0.00 41.19 1.75
195 207 3.829026 AGATGCGATACTCTGCCTAATCA 59.171 43.478 0.00 0.00 0.00 2.57
200 212 4.090642 GCGATACTCTGCCTAATCATTTCG 59.909 45.833 0.00 0.00 0.00 3.46
202 214 3.550437 ACTCTGCCTAATCATTTCGCT 57.450 42.857 0.00 0.00 0.00 4.93
203 215 3.201290 ACTCTGCCTAATCATTTCGCTG 58.799 45.455 0.00 0.00 0.00 5.18
280 422 2.805099 TGGCGTTTTTGCATCCATTTTC 59.195 40.909 0.00 0.00 36.28 2.29
287 429 1.298638 GCATCCATTTTCGAGGCGC 60.299 57.895 0.00 0.00 0.00 6.53
341 483 2.902486 TCTCAGTGGAATCTGCTCTGTT 59.098 45.455 0.00 0.00 35.63 3.16
404 550 3.333414 GTGCACACACGTCAGCAT 58.667 55.556 13.17 0.00 39.43 3.79
415 561 4.584688 TCAGCATCTGACACGCAG 57.415 55.556 0.00 0.00 46.31 5.18
438 584 2.237143 AGATGCTGCTTAGCTAACCACA 59.763 45.455 5.60 4.61 35.49 4.17
468 614 2.623416 TCAGACCGTTCGATATGCAGAT 59.377 45.455 0.00 0.00 0.00 2.90
469 615 3.068165 TCAGACCGTTCGATATGCAGATT 59.932 43.478 0.00 0.00 0.00 2.40
470 616 3.804325 CAGACCGTTCGATATGCAGATTT 59.196 43.478 0.00 0.00 0.00 2.17
472 618 4.876107 AGACCGTTCGATATGCAGATTTTT 59.124 37.500 0.00 0.00 0.00 1.94
509 655 7.088905 ACCTCGCTATAATACCAAAACGATAG 58.911 38.462 0.00 0.00 46.19 2.08
528 674 4.470170 TGCACGTACGATCGCGCT 62.470 61.111 24.41 0.00 42.48 5.92
537 683 2.413351 GATCGCGCTGTAGGCAGA 59.587 61.111 5.56 0.00 45.28 4.26
557 713 6.362283 GGCAGAATACACACATACACAAAAAC 59.638 38.462 0.00 0.00 0.00 2.43
630 787 4.504132 GATCGAGCAAACGAGCCT 57.496 55.556 0.00 0.00 45.22 4.58
765 944 1.396996 GCACGAGACGCCAACAATAAT 59.603 47.619 0.00 0.00 0.00 1.28
836 1015 4.148825 GCGCTCCACGTCAGGGAT 62.149 66.667 0.00 0.00 46.11 3.85
838 1017 2.982130 GCTCCACGTCAGGGATGT 59.018 61.111 0.00 0.00 33.04 3.06
968 1147 4.402528 CCCGGATCACACCCGCAA 62.403 66.667 0.73 0.00 45.24 4.85
1019 1198 4.439700 GCCGATGTATATATACACCAGCGT 60.440 45.833 24.43 10.30 45.11 5.07
1060 1251 0.527385 GCAAGCGCAAGTGGTGAAAA 60.527 50.000 11.47 0.00 38.36 2.29
1086 1277 0.523125 CCAAACACAGCACACACACG 60.523 55.000 0.00 0.00 0.00 4.49
1100 1291 2.022129 ACACGCACGCAGTTAGAGC 61.022 57.895 0.00 0.00 41.61 4.09
1513 1736 0.678395 TGTTGCCATTGCCGATTTGT 59.322 45.000 0.00 0.00 36.33 2.83
1543 1766 3.515286 GCTCTGCGGTGCATGCAT 61.515 61.111 25.64 0.00 42.32 3.96
1573 1796 5.818336 TGAGCTAGTGACTCACTGTATCTAC 59.182 44.000 20.19 7.09 45.01 2.59
1579 1802 5.881443 AGTGACTCACTGTATCTACCACTAC 59.119 44.000 11.07 0.00 43.63 2.73
1736 1959 2.499827 GGAGAACCCGGCGCTCTAT 61.500 63.158 7.64 0.00 0.00 1.98
1790 2013 2.586792 GTCATCCAGGCCTCGCTT 59.413 61.111 0.00 0.00 0.00 4.68
1926 2155 4.562082 CCACATACGTAGTTGGTGAGAAA 58.438 43.478 14.49 0.00 43.02 2.52
1927 2156 4.387862 CCACATACGTAGTTGGTGAGAAAC 59.612 45.833 14.49 0.00 43.02 2.78
2046 2308 4.753107 GCAAGTTTAGGTGTAACTGCTACA 59.247 41.667 0.00 0.00 38.23 2.74
2047 2309 5.411669 GCAAGTTTAGGTGTAACTGCTACAT 59.588 40.000 0.00 0.00 42.50 2.29
2048 2310 6.592607 GCAAGTTTAGGTGTAACTGCTACATA 59.407 38.462 0.00 0.00 42.50 2.29
2049 2311 7.201530 GCAAGTTTAGGTGTAACTGCTACATAG 60.202 40.741 0.00 0.00 42.50 2.23
2050 2312 7.713734 AGTTTAGGTGTAACTGCTACATAGA 57.286 36.000 0.00 0.00 42.50 1.98
2051 2313 7.773149 AGTTTAGGTGTAACTGCTACATAGAG 58.227 38.462 0.00 0.00 42.50 2.43
2052 2314 4.657436 AGGTGTAACTGCTACATAGAGC 57.343 45.455 0.00 0.00 42.50 4.09
2065 2327 5.007430 GCTACATAGAGCACGTACTTACTGA 59.993 44.000 0.00 0.00 42.36 3.41
2279 2542 1.902508 AGACACACCAGGTCCAGTATG 59.097 52.381 0.00 0.00 35.89 2.39
2288 2555 1.410517 AGGTCCAGTATGCACTCATCG 59.589 52.381 0.00 0.00 34.22 3.84
2296 2563 4.500837 CAGTATGCACTCATCGTCTGTTAC 59.499 45.833 0.00 0.00 34.22 2.50
2297 2564 3.876274 ATGCACTCATCGTCTGTTACT 57.124 42.857 0.00 0.00 0.00 2.24
2298 2565 2.946564 TGCACTCATCGTCTGTTACTG 58.053 47.619 0.00 0.00 0.00 2.74
2302 2569 4.413087 CACTCATCGTCTGTTACTGGTAC 58.587 47.826 0.00 0.00 0.00 3.34
2304 2571 2.756760 TCATCGTCTGTTACTGGTACCC 59.243 50.000 10.07 0.00 0.00 3.69
2308 2575 3.387374 TCGTCTGTTACTGGTACCCAAAA 59.613 43.478 10.07 0.00 30.80 2.44
2334 2601 6.639632 AATTGACACTTGCATCTTGTTACT 57.360 33.333 0.00 0.00 0.00 2.24
2335 2602 7.744087 AATTGACACTTGCATCTTGTTACTA 57.256 32.000 0.00 0.00 0.00 1.82
2336 2603 6.539649 TTGACACTTGCATCTTGTTACTAC 57.460 37.500 0.00 0.00 0.00 2.73
2348 2615 7.878127 GCATCTTGTTACTACCCATACATACAT 59.122 37.037 0.00 0.00 0.00 2.29
2351 2618 9.650714 TCTTGTTACTACCCATACATACATACT 57.349 33.333 0.00 0.00 0.00 2.12
2357 2624 8.804912 ACTACCCATACATACATACTAGTAGC 57.195 38.462 8.85 0.00 0.00 3.58
2377 2679 2.486191 GCTAGTAGGCACGTACCTAGGA 60.486 54.545 17.98 5.24 43.02 2.94
2378 2680 2.049888 AGTAGGCACGTACCTAGGAC 57.950 55.000 17.98 6.45 43.02 3.85
2379 2681 1.563410 AGTAGGCACGTACCTAGGACT 59.437 52.381 17.98 8.77 43.02 3.85
2380 2682 1.946081 GTAGGCACGTACCTAGGACTC 59.054 57.143 17.98 0.00 43.02 3.36
2381 2683 0.395448 AGGCACGTACCTAGGACTCC 60.395 60.000 17.98 7.40 38.67 3.85
2382 2684 0.682209 GGCACGTACCTAGGACTCCA 60.682 60.000 17.98 0.00 0.00 3.86
2403 2706 2.683768 ACTCCAAGAGCCCATAGTAGG 58.316 52.381 0.00 0.00 32.04 3.18
2519 2826 7.859377 CGTAGATAGTCGCCAAGAACTTATTAA 59.141 37.037 0.00 0.00 0.00 1.40
2520 2827 9.694137 GTAGATAGTCGCCAAGAACTTATTAAT 57.306 33.333 0.00 0.00 0.00 1.40
2613 2925 1.378762 GCACAAGCCTCTGGGGTAA 59.621 57.895 0.00 0.00 43.29 2.85
2614 2926 0.251165 GCACAAGCCTCTGGGGTAAA 60.251 55.000 0.00 0.00 43.29 2.01
2634 2949 9.203163 GGGTAAATGGCTATATATGTCTAGACT 57.797 37.037 23.01 11.45 0.00 3.24
2675 2990 2.438434 CATGCCCGGGAAGGACAC 60.438 66.667 29.31 4.52 45.00 3.67
2892 3230 0.671251 TGACGGGTTCAATTGGTTGC 59.329 50.000 5.42 0.00 35.26 4.17
2996 3334 6.883217 TCTTCGTAAGTCAAGTCTACCAGTAT 59.117 38.462 0.00 0.00 39.48 2.12
2997 3335 6.432607 TCGTAAGTCAAGTCTACCAGTATG 57.567 41.667 0.00 0.00 39.48 2.39
3118 3464 6.735130 GTTAAACACCTCATGCTTAACTTGT 58.265 36.000 5.94 0.00 42.67 3.16
3134 3480 1.336440 CTTGTGCGTGACAAAATCCCA 59.664 47.619 4.11 0.00 44.14 4.37
3135 3481 1.614996 TGTGCGTGACAAAATCCCAT 58.385 45.000 0.00 0.00 0.00 4.00
3146 3492 2.058593 AAATCCCATTTCGCCTCTCC 57.941 50.000 0.00 0.00 0.00 3.71
3149 3497 0.909610 TCCCATTTCGCCTCTCCAGT 60.910 55.000 0.00 0.00 0.00 4.00
3150 3498 0.745845 CCCATTTCGCCTCTCCAGTG 60.746 60.000 0.00 0.00 0.00 3.66
3151 3499 0.036010 CCATTTCGCCTCTCCAGTGT 60.036 55.000 0.00 0.00 0.00 3.55
3152 3500 1.207089 CCATTTCGCCTCTCCAGTGTA 59.793 52.381 0.00 0.00 0.00 2.90
3153 3501 2.544685 CATTTCGCCTCTCCAGTGTAG 58.455 52.381 0.00 0.00 0.00 2.74
3155 3503 0.039180 TTCGCCTCTCCAGTGTAGGA 59.961 55.000 7.43 0.00 36.00 2.94
3162 3510 3.457560 TCCAGTGTAGGAGTGCAGT 57.542 52.632 0.00 0.00 32.77 4.40
3163 3511 1.257743 TCCAGTGTAGGAGTGCAGTC 58.742 55.000 13.44 13.44 32.77 3.51
3164 3512 0.247736 CCAGTGTAGGAGTGCAGTCC 59.752 60.000 30.10 30.10 36.79 3.85
3166 3514 1.203523 CAGTGTAGGAGTGCAGTCCTC 59.796 57.143 40.17 30.23 44.25 3.71
3192 3540 1.666189 GTAAGTGGCGCAAGAATCTCC 59.334 52.381 10.83 0.00 43.02 3.71
3266 3623 1.065701 ACAAGAGAATCGATCGACCCG 59.934 52.381 22.06 7.40 42.67 5.28
3272 3629 0.750850 AATCGATCGACCCGTCCATT 59.249 50.000 22.06 5.15 0.00 3.16
3275 3632 0.179121 CGATCGACCCGTCCATTCAA 60.179 55.000 10.26 0.00 0.00 2.69
3346 3703 9.344772 CATCTCTAACTCCATTACTGTACTACT 57.655 37.037 0.00 0.00 0.00 2.57
3353 3710 4.583489 TCCATTACTGTACTACTAGCAGCC 59.417 45.833 0.00 0.00 33.87 4.85
3386 3743 1.407979 CCATGACGTACTACCCCACTC 59.592 57.143 0.00 0.00 0.00 3.51
3387 3744 2.376109 CATGACGTACTACCCCACTCT 58.624 52.381 0.00 0.00 0.00 3.24
3388 3745 1.830279 TGACGTACTACCCCACTCTG 58.170 55.000 0.00 0.00 0.00 3.35
3389 3746 1.074405 TGACGTACTACCCCACTCTGT 59.926 52.381 0.00 0.00 0.00 3.41
3390 3747 2.305635 TGACGTACTACCCCACTCTGTA 59.694 50.000 0.00 0.00 0.00 2.74
3421 3778 1.081442 CGTGACAGCACAGACGCTA 60.081 57.895 0.00 0.00 45.41 4.26
3457 3819 2.223249 CGATGTTTTGGAGGTAATGGCG 60.223 50.000 0.00 0.00 0.00 5.69
3489 3852 0.109319 CTAACCCCATTTGTGCACGC 60.109 55.000 13.13 0.00 0.00 5.34
3526 3889 2.559668 GCATGCTCTCTCTGCTCTCTAT 59.440 50.000 11.37 0.00 33.15 1.98
3582 3946 1.341531 AGTGTTTAGCTGCGTCAGTCT 59.658 47.619 0.00 8.20 33.43 3.24
3667 4031 2.909006 TGAGCTTTCTGGAGATGAGGTT 59.091 45.455 0.00 0.00 0.00 3.50
3669 4033 1.742268 GCTTTCTGGAGATGAGGTTGC 59.258 52.381 0.00 0.00 0.00 4.17
3679 4044 4.858680 GAGGTTGCTAGGCGGGGC 62.859 72.222 0.00 0.00 0.00 5.80
3866 4260 0.969149 TCGTCTCTGAACACCATGCT 59.031 50.000 0.00 0.00 0.00 3.79
3871 4265 4.213270 CGTCTCTGAACACCATGCTAAAAA 59.787 41.667 0.00 0.00 0.00 1.94
3916 4321 4.187694 CCAATTTGACCTCTGCTCTCTAC 58.812 47.826 0.00 0.00 0.00 2.59
3917 4322 4.081198 CCAATTTGACCTCTGCTCTCTACT 60.081 45.833 0.00 0.00 0.00 2.57
3918 4323 5.127845 CCAATTTGACCTCTGCTCTCTACTA 59.872 44.000 0.00 0.00 0.00 1.82
3919 4324 5.845391 ATTTGACCTCTGCTCTCTACTAC 57.155 43.478 0.00 0.00 0.00 2.73
3920 4325 2.907634 TGACCTCTGCTCTCTACTACG 58.092 52.381 0.00 0.00 0.00 3.51
3921 4326 2.236644 TGACCTCTGCTCTCTACTACGT 59.763 50.000 0.00 0.00 0.00 3.57
3922 4327 3.450096 TGACCTCTGCTCTCTACTACGTA 59.550 47.826 0.00 0.00 0.00 3.57
3923 4328 4.101274 TGACCTCTGCTCTCTACTACGTAT 59.899 45.833 0.00 0.00 0.00 3.06
3924 4329 5.038651 ACCTCTGCTCTCTACTACGTATT 57.961 43.478 0.00 0.00 0.00 1.89
3925 4330 5.438833 ACCTCTGCTCTCTACTACGTATTT 58.561 41.667 0.00 0.00 0.00 1.40
3926 4331 5.887035 ACCTCTGCTCTCTACTACGTATTTT 59.113 40.000 0.00 0.00 0.00 1.82
3927 4332 7.052873 ACCTCTGCTCTCTACTACGTATTTTA 58.947 38.462 0.00 0.00 0.00 1.52
3928 4333 7.227116 ACCTCTGCTCTCTACTACGTATTTTAG 59.773 40.741 0.00 0.00 0.00 1.85
3929 4334 7.227116 CCTCTGCTCTCTACTACGTATTTTAGT 59.773 40.741 0.00 0.00 34.15 2.24
3930 4335 8.503458 TCTGCTCTCTACTACGTATTTTAGTT 57.497 34.615 0.00 0.00 31.99 2.24
3931 4336 9.605275 TCTGCTCTCTACTACGTATTTTAGTTA 57.395 33.333 0.00 0.00 31.99 2.24
3958 4363 9.757859 TCTAAACGCTTTTATATTTGTTTACGG 57.242 29.630 0.00 0.00 32.41 4.02
3959 4364 9.757859 CTAAACGCTTTTATATTTGTTTACGGA 57.242 29.630 0.00 0.00 32.41 4.69
3960 4365 8.663771 AAACGCTTTTATATTTGTTTACGGAG 57.336 30.769 0.00 0.00 0.00 4.63
3961 4366 6.778108 ACGCTTTTATATTTGTTTACGGAGG 58.222 36.000 0.00 0.00 0.00 4.30
3962 4367 6.594937 ACGCTTTTATATTTGTTTACGGAGGA 59.405 34.615 0.00 0.00 0.00 3.71
3963 4368 7.119553 ACGCTTTTATATTTGTTTACGGAGGAA 59.880 33.333 0.00 0.00 0.00 3.36
3964 4369 7.638683 CGCTTTTATATTTGTTTACGGAGGAAG 59.361 37.037 0.00 0.00 0.00 3.46
3965 4370 8.456471 GCTTTTATATTTGTTTACGGAGGAAGT 58.544 33.333 0.00 0.00 0.00 3.01
3973 4378 4.518970 TGTTTACGGAGGAAGTACGTAGTT 59.481 41.667 15.43 15.43 37.78 2.24
4037 4444 7.525688 GGAGAAACCTTTTTGTCTTTTCAAG 57.474 36.000 0.00 0.00 35.72 3.02
4047 4454 6.591750 TTTGTCTTTTCAAGGTGTTGGTAA 57.408 33.333 0.00 0.00 34.09 2.85
4052 4459 6.039382 GTCTTTTCAAGGTGTTGGTAAGTGAT 59.961 38.462 0.00 0.00 34.09 3.06
4068 4477 6.547510 GGTAAGTGATGGAGGAGCATAATTTT 59.452 38.462 0.00 0.00 0.00 1.82
4262 4679 0.741221 CCAAGCTCCACTAACCGCTC 60.741 60.000 0.00 0.00 31.30 5.03
4263 4680 0.247736 CAAGCTCCACTAACCGCTCT 59.752 55.000 0.00 0.00 31.30 4.09
4311 4729 3.109928 TCTGAAATGAGATGCCTGAGGA 58.890 45.455 0.65 0.00 0.00 3.71
4424 4848 7.980662 TGTTTATTGGCTGATTATTCCAATGTG 59.019 33.333 14.05 0.00 46.62 3.21
4435 4859 4.685169 ATTCCAATGTGTTCGTCATGTC 57.315 40.909 0.00 0.00 0.00 3.06
4469 4893 2.170397 CGGCCATATGATATGCCCAGTA 59.830 50.000 12.34 0.00 40.87 2.74
4470 4894 3.181451 CGGCCATATGATATGCCCAGTAT 60.181 47.826 12.34 0.00 40.87 2.12
4471 4895 4.139786 GGCCATATGATATGCCCAGTATG 58.860 47.826 7.52 0.00 37.94 2.39
4486 4910 4.478843 CAGTATGGCTACATGCATTGTC 57.521 45.455 0.00 0.00 45.15 3.18
4487 4911 3.251729 CAGTATGGCTACATGCATTGTCC 59.748 47.826 0.00 0.00 45.15 4.02
4488 4912 2.440517 ATGGCTACATGCATTGTCCA 57.559 45.000 0.00 2.65 45.15 4.02
4489 4913 1.462616 TGGCTACATGCATTGTCCAC 58.537 50.000 0.00 0.00 45.15 4.02
4490 4914 0.378257 GGCTACATGCATTGTCCACG 59.622 55.000 0.00 0.00 45.15 4.94
4491 4915 1.086696 GCTACATGCATTGTCCACGT 58.913 50.000 0.00 0.00 39.87 4.49
4492 4916 1.202065 GCTACATGCATTGTCCACGTG 60.202 52.381 9.08 9.08 39.87 4.49
4493 4917 0.801872 TACATGCATTGTCCACGTGC 59.198 50.000 10.91 0.00 39.87 5.34
4495 4919 3.342909 TGCATTGTCCACGTGCAG 58.657 55.556 10.91 0.00 43.30 4.41
4496 4920 1.227793 TGCATTGTCCACGTGCAGA 60.228 52.632 10.91 0.00 43.30 4.26
4497 4921 1.229975 TGCATTGTCCACGTGCAGAG 61.230 55.000 10.91 0.00 43.30 3.35
4498 4922 1.915614 GCATTGTCCACGTGCAGAGG 61.916 60.000 10.91 0.00 38.68 3.69
4499 4923 1.672356 ATTGTCCACGTGCAGAGGC 60.672 57.895 10.91 0.00 41.68 4.70
4500 4924 3.825160 TTGTCCACGTGCAGAGGCC 62.825 63.158 10.91 0.00 40.13 5.19
4501 4925 4.314440 GTCCACGTGCAGAGGCCA 62.314 66.667 10.91 0.00 40.13 5.36
4502 4926 4.007644 TCCACGTGCAGAGGCCAG 62.008 66.667 10.91 0.00 40.13 4.85
4515 4939 2.448542 GCCAGGGCCATCCTCCTA 60.449 66.667 6.18 0.00 46.12 2.94
4516 4940 1.849823 GCCAGGGCCATCCTCCTAT 60.850 63.158 6.18 0.00 46.12 2.57
4517 4941 1.430369 GCCAGGGCCATCCTCCTATT 61.430 60.000 6.18 0.00 46.12 1.73
4518 4942 1.152649 CCAGGGCCATCCTCCTATTT 58.847 55.000 6.18 0.00 46.12 1.40
4519 4943 1.500736 CCAGGGCCATCCTCCTATTTT 59.499 52.381 6.18 0.00 46.12 1.82
4520 4944 2.716424 CCAGGGCCATCCTCCTATTTTA 59.284 50.000 6.18 0.00 46.12 1.52
4521 4945 3.334881 CCAGGGCCATCCTCCTATTTTAT 59.665 47.826 6.18 0.00 46.12 1.40
4522 4946 4.202716 CCAGGGCCATCCTCCTATTTTATT 60.203 45.833 6.18 0.00 46.12 1.40
4523 4947 5.397360 CAGGGCCATCCTCCTATTTTATTT 58.603 41.667 6.18 0.00 46.12 1.40
4524 4948 5.840693 CAGGGCCATCCTCCTATTTTATTTT 59.159 40.000 6.18 0.00 46.12 1.82
4525 4949 7.010160 CAGGGCCATCCTCCTATTTTATTTTA 58.990 38.462 6.18 0.00 46.12 1.52
4526 4950 7.675619 CAGGGCCATCCTCCTATTTTATTTTAT 59.324 37.037 6.18 0.00 46.12 1.40
4527 4951 8.241612 AGGGCCATCCTCCTATTTTATTTTATT 58.758 33.333 6.18 0.00 44.06 1.40
4528 4952 8.880244 GGGCCATCCTCCTATTTTATTTTATTT 58.120 33.333 4.39 0.00 0.00 1.40
4564 4988 7.064371 CCAGTTCTGTTCTGAATTCTGATACTG 59.936 40.741 14.89 18.36 35.20 2.74
4568 4992 6.936335 TCTGTTCTGAATTCTGATACTGCAAA 59.064 34.615 14.89 0.00 0.00 3.68
4579 5003 7.834068 TCTGATACTGCAAAACTCTGAATAC 57.166 36.000 0.00 0.00 0.00 1.89
4638 5066 2.225255 GTCTGAACTTTGAGGCTCTTGC 59.775 50.000 16.72 0.21 38.76 4.01
4707 5135 4.816385 TGCTCTGAAACCACTTCAAGTTAG 59.184 41.667 0.00 0.00 43.54 2.34
4721 5154 8.226448 CACTTCAAGTTAGCATCACTCTAAAAG 58.774 37.037 0.00 0.00 0.00 2.27
4891 5324 2.393764 GTTCAAATTGTGAGCAACCCG 58.606 47.619 0.00 0.00 37.41 5.28
4911 5350 4.225984 CCGTACATTCACCACAACATTTG 58.774 43.478 0.00 0.00 0.00 2.32
5103 5550 1.200948 GCCCAACAAACTCATCTGCTC 59.799 52.381 0.00 0.00 0.00 4.26
5106 5553 1.135859 CAACAAACTCATCTGCTCCGC 60.136 52.381 0.00 0.00 0.00 5.54
5107 5554 0.322975 ACAAACTCATCTGCTCCGCT 59.677 50.000 0.00 0.00 0.00 5.52
5108 5555 1.550524 ACAAACTCATCTGCTCCGCTA 59.449 47.619 0.00 0.00 0.00 4.26
5109 5556 2.200067 CAAACTCATCTGCTCCGCTAG 58.800 52.381 0.00 0.00 0.00 3.42
5110 5557 1.479709 AACTCATCTGCTCCGCTAGT 58.520 50.000 0.00 0.00 0.00 2.57
5111 5558 2.350057 ACTCATCTGCTCCGCTAGTA 57.650 50.000 0.00 0.00 0.00 1.82
5112 5559 1.950909 ACTCATCTGCTCCGCTAGTAC 59.049 52.381 0.00 0.00 0.00 2.73
5113 5560 2.226330 CTCATCTGCTCCGCTAGTACT 58.774 52.381 0.00 0.00 0.00 2.73
5114 5561 1.950216 TCATCTGCTCCGCTAGTACTG 59.050 52.381 5.39 0.00 0.00 2.74
5115 5562 0.671251 ATCTGCTCCGCTAGTACTGC 59.329 55.000 5.39 6.44 0.00 4.40
5116 5563 1.066587 CTGCTCCGCTAGTACTGCC 59.933 63.158 5.39 0.00 0.00 4.85
5117 5564 2.026301 GCTCCGCTAGTACTGCCG 59.974 66.667 5.39 7.79 0.00 5.69
5118 5565 2.026301 CTCCGCTAGTACTGCCGC 59.974 66.667 5.39 4.65 0.00 6.53
5119 5566 2.439701 TCCGCTAGTACTGCCGCT 60.440 61.111 5.39 0.00 0.00 5.52
5120 5567 2.278857 CCGCTAGTACTGCCGCTG 60.279 66.667 5.39 0.00 0.00 5.18
5121 5568 2.956964 CGCTAGTACTGCCGCTGC 60.957 66.667 5.39 0.00 38.26 5.25
5125 5572 3.350909 TAGTACTGCCGCTGCACCG 62.351 63.158 5.39 0.00 44.23 4.94
5151 5598 4.776795 AAATTACACCGGCGAAAGATTT 57.223 36.364 9.30 5.48 0.00 2.17
5153 5600 4.870221 ATTACACCGGCGAAAGATTTAC 57.130 40.909 9.30 0.00 0.00 2.01
5155 5602 2.073816 ACACCGGCGAAAGATTTACTG 58.926 47.619 9.30 0.00 0.00 2.74
5156 5603 2.289195 ACACCGGCGAAAGATTTACTGA 60.289 45.455 9.30 0.00 0.00 3.41
5158 5605 2.289195 ACCGGCGAAAGATTTACTGACA 60.289 45.455 9.30 0.00 0.00 3.58
5160 5607 2.093783 CGGCGAAAGATTTACTGACACC 59.906 50.000 0.00 0.00 0.00 4.16
5161 5608 3.071479 GGCGAAAGATTTACTGACACCA 58.929 45.455 0.00 0.00 0.00 4.17
5162 5609 3.120304 GGCGAAAGATTTACTGACACCAC 60.120 47.826 0.00 0.00 0.00 4.16
5163 5610 3.496884 GCGAAAGATTTACTGACACCACA 59.503 43.478 0.00 0.00 0.00 4.17
5164 5611 4.154195 GCGAAAGATTTACTGACACCACAT 59.846 41.667 0.00 0.00 0.00 3.21
5166 5613 6.307155 CGAAAGATTTACTGACACCACATTC 58.693 40.000 0.00 0.00 0.00 2.67
5167 5614 5.862924 AAGATTTACTGACACCACATTCG 57.137 39.130 0.00 0.00 0.00 3.34
5169 5616 2.831685 TTACTGACACCACATTCGCT 57.168 45.000 0.00 0.00 0.00 4.93
5189 5655 2.584608 CAGGAAGGGATCGCCGTT 59.415 61.111 6.09 0.00 44.51 4.44
5699 6165 0.175073 GGATGGACCAGTACACGACC 59.825 60.000 0.00 0.00 38.79 4.79
5911 6407 3.134458 AGAACTTTGCTCCGTCTGAAAG 58.866 45.455 0.00 0.00 0.00 2.62
5919 6448 0.400213 TCCGTCTGAAAGTTGGGCAT 59.600 50.000 0.00 0.00 33.76 4.40
5933 6462 4.016444 GTTGGGCATTGGATCTGAAACTA 58.984 43.478 0.00 0.00 0.00 2.24
5990 6519 2.268920 GGGACGAGCATGCTGGAA 59.731 61.111 32.94 0.00 0.00 3.53
6068 6597 8.133627 CACAAACTGTCATCTTTCTGAAGAAAT 58.866 33.333 5.97 0.00 44.61 2.17
6278 6808 4.343323 CGGGCATGGTGGTGGACA 62.343 66.667 0.00 0.00 0.00 4.02
6335 6870 5.680619 TGACCTGAGTTGAGTTGTTAACAT 58.319 37.500 9.56 0.00 0.00 2.71
6505 7044 7.251281 TCTGAACAAATGATAGTACGAGACTG 58.749 38.462 5.21 0.00 39.39 3.51
6549 7088 0.469705 TGGTTGCAAAGCCATCAGGT 60.470 50.000 0.00 0.00 45.42 4.00
6550 7089 0.037975 GGTTGCAAAGCCATCAGGTG 60.038 55.000 0.00 0.00 38.67 4.00
6552 7091 0.961019 TTGCAAAGCCATCAGGTGTC 59.039 50.000 0.00 0.00 37.19 3.67
6553 7092 0.111061 TGCAAAGCCATCAGGTGTCT 59.889 50.000 0.00 0.00 37.19 3.41
6554 7093 0.524862 GCAAAGCCATCAGGTGTCTG 59.475 55.000 0.00 0.00 42.21 3.51
6555 7094 1.901591 CAAAGCCATCAGGTGTCTGT 58.098 50.000 0.00 0.00 41.59 3.41
6556 7095 1.808945 CAAAGCCATCAGGTGTCTGTC 59.191 52.381 0.00 0.00 41.59 3.51
6559 7098 0.254178 GCCATCAGGTGTCTGTCCAT 59.746 55.000 0.00 0.00 41.59 3.41
6562 7101 2.362736 CATCAGGTGTCTGTCCATTGG 58.637 52.381 0.00 0.00 41.59 3.16
6563 7102 0.036732 TCAGGTGTCTGTCCATTGGC 59.963 55.000 0.00 0.00 41.59 4.52
6566 7105 1.133513 AGGTGTCTGTCCATTGGCAAA 60.134 47.619 3.01 0.00 0.00 3.68
6569 7108 3.244181 GGTGTCTGTCCATTGGCAAAAAT 60.244 43.478 3.01 0.00 0.00 1.82
6570 7109 4.379652 GTGTCTGTCCATTGGCAAAAATT 58.620 39.130 3.01 0.00 0.00 1.82
6571 7110 4.815846 GTGTCTGTCCATTGGCAAAAATTT 59.184 37.500 3.01 0.00 0.00 1.82
6573 7112 5.988561 TGTCTGTCCATTGGCAAAAATTTAC 59.011 36.000 3.01 0.00 0.00 2.01
6575 7114 6.146021 GTCTGTCCATTGGCAAAAATTTACTG 59.854 38.462 3.01 0.00 0.00 2.74
6576 7115 4.754114 TGTCCATTGGCAAAAATTTACTGC 59.246 37.500 3.01 14.06 35.28 4.40
6577 7116 4.996758 GTCCATTGGCAAAAATTTACTGCT 59.003 37.500 19.19 3.46 36.32 4.24
6578 7117 6.162777 GTCCATTGGCAAAAATTTACTGCTA 58.837 36.000 19.19 13.53 36.32 3.49
6592 7131 8.747538 AATTTACTGCTACCCTAATTAACAGG 57.252 34.615 0.00 0.00 0.00 4.00
6662 7201 7.054124 AGGACAGACACATAAGAACAGAAAAA 58.946 34.615 0.00 0.00 0.00 1.94
6665 7204 9.736023 GACAGACACATAAGAACAGAAAAATTT 57.264 29.630 0.00 0.00 0.00 1.82
6682 7240 8.682710 AGAAAAATTTAACACTTGCAGACTACA 58.317 29.630 0.00 0.00 0.00 2.74
6692 7250 6.320164 ACACTTGCAGACTACAAATAACCAAA 59.680 34.615 0.00 0.00 0.00 3.28
6694 7252 7.326789 CACTTGCAGACTACAAATAACCAAATG 59.673 37.037 0.00 0.00 0.00 2.32
6696 7254 6.007076 TGCAGACTACAAATAACCAAATGGA 58.993 36.000 6.42 0.00 38.94 3.41
6698 7256 6.072175 GCAGACTACAAATAACCAAATGGACA 60.072 38.462 6.42 0.00 38.94 4.02
6699 7257 7.530010 CAGACTACAAATAACCAAATGGACAG 58.470 38.462 6.42 0.00 38.94 3.51
6700 7258 7.390440 CAGACTACAAATAACCAAATGGACAGA 59.610 37.037 6.42 0.00 38.94 3.41
6701 7259 7.390718 AGACTACAAATAACCAAATGGACAGAC 59.609 37.037 6.42 0.00 38.94 3.51
6711 7269 6.068010 ACCAAATGGACAGACACATAAGAAA 58.932 36.000 6.42 0.00 38.94 2.52
6754 7315 7.830739 ACTACCAAATTCCAACATGAAAGATC 58.169 34.615 0.00 0.00 0.00 2.75
6763 7324 6.115446 TCCAACATGAAAGATCAGTGTATCC 58.885 40.000 0.00 0.00 39.39 2.59
6764 7325 5.007039 CCAACATGAAAGATCAGTGTATCCG 59.993 44.000 0.00 0.00 39.39 4.18
6765 7326 4.122776 ACATGAAAGATCAGTGTATCCGC 58.877 43.478 0.00 0.00 39.39 5.54
6771 7332 6.424812 TGAAAGATCAGTGTATCCGCATATTG 59.575 38.462 0.00 0.00 0.00 1.90
6772 7333 5.474578 AGATCAGTGTATCCGCATATTGT 57.525 39.130 0.00 0.00 0.00 2.71
6780 7344 5.048991 GTGTATCCGCATATTGTAAAAGGGG 60.049 44.000 0.00 0.00 32.94 4.79
6833 7397 8.599055 TTCTCATATATCTTCATTGCAGACAC 57.401 34.615 0.00 0.00 0.00 3.67
6941 7516 5.576447 TTTCTGAACAAGGACAAAACTCC 57.424 39.130 0.00 0.00 0.00 3.85
7015 7590 2.095567 ACTAAAGACATTGCTTGCTGCG 60.096 45.455 0.00 0.00 46.63 5.18
7017 7592 0.890542 AAGACATTGCTTGCTGCGGA 60.891 50.000 0.00 0.00 46.63 5.54
7018 7593 1.154150 GACATTGCTTGCTGCGGAC 60.154 57.895 0.00 0.00 46.63 4.79
7019 7594 1.580845 GACATTGCTTGCTGCGGACT 61.581 55.000 0.00 0.00 46.63 3.85
7021 7596 2.042831 ATTGCTTGCTGCGGACTCC 61.043 57.895 0.00 0.00 46.63 3.85
7039 7658 3.057174 ACTCCGAATCAAGACTCAGTCAC 60.057 47.826 7.77 0.00 34.60 3.67
7055 7674 2.441164 ACTGTTTTGGGGCGCACA 60.441 55.556 13.89 5.83 0.00 4.57
7148 7767 3.184683 CTCAAGAGCAGCCGCGAC 61.185 66.667 8.23 0.00 45.49 5.19
7181 7800 2.368875 GACCTTGACCCTCTTGAACTCA 59.631 50.000 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.233848 CCCACTCGTTTTCGTTTCGG 59.766 55.000 0.00 0.00 44.46 4.30
1 2 0.932399 ACCCACTCGTTTTCGTTTCG 59.068 50.000 0.00 0.00 44.46 3.46
2 3 3.666111 GCATACCCACTCGTTTTCGTTTC 60.666 47.826 0.00 0.00 44.46 2.78
3 4 2.224784 GCATACCCACTCGTTTTCGTTT 59.775 45.455 0.00 0.00 44.46 3.60
4 5 1.802365 GCATACCCACTCGTTTTCGTT 59.198 47.619 0.00 0.00 44.46 3.85
7 8 2.097466 CCATGCATACCCACTCGTTTTC 59.903 50.000 0.00 0.00 0.00 2.29
8 9 2.091541 CCATGCATACCCACTCGTTTT 58.908 47.619 0.00 0.00 0.00 2.43
9 10 1.681780 CCCATGCATACCCACTCGTTT 60.682 52.381 0.00 0.00 0.00 3.60
10 11 0.107214 CCCATGCATACCCACTCGTT 60.107 55.000 0.00 0.00 0.00 3.85
11 12 1.271840 ACCCATGCATACCCACTCGT 61.272 55.000 0.00 0.00 0.00 4.18
12 13 0.756294 TACCCATGCATACCCACTCG 59.244 55.000 0.00 0.00 0.00 4.18
13 14 3.149196 CATTACCCATGCATACCCACTC 58.851 50.000 0.00 0.00 0.00 3.51
14 15 2.158475 CCATTACCCATGCATACCCACT 60.158 50.000 0.00 0.00 0.00 4.00
15 16 2.238521 CCATTACCCATGCATACCCAC 58.761 52.381 0.00 0.00 0.00 4.61
16 17 1.146774 CCCATTACCCATGCATACCCA 59.853 52.381 0.00 0.00 0.00 4.51
17 18 1.146982 ACCCATTACCCATGCATACCC 59.853 52.381 0.00 0.00 0.00 3.69
18 19 2.675658 ACCCATTACCCATGCATACC 57.324 50.000 0.00 0.00 0.00 2.73
19 20 3.081804 GCTACCCATTACCCATGCATAC 58.918 50.000 0.00 0.00 0.00 2.39
20 21 2.986019 AGCTACCCATTACCCATGCATA 59.014 45.455 0.00 0.00 0.00 3.14
21 22 1.782752 AGCTACCCATTACCCATGCAT 59.217 47.619 0.00 0.00 0.00 3.96
22 23 1.221635 AGCTACCCATTACCCATGCA 58.778 50.000 0.00 0.00 0.00 3.96
23 24 2.230660 GAAGCTACCCATTACCCATGC 58.769 52.381 0.00 0.00 0.00 4.06
24 25 3.576078 TGAAGCTACCCATTACCCATG 57.424 47.619 0.00 0.00 0.00 3.66
25 26 5.631119 GTTATGAAGCTACCCATTACCCAT 58.369 41.667 0.00 0.00 0.00 4.00
26 27 4.443739 CGTTATGAAGCTACCCATTACCCA 60.444 45.833 0.00 0.00 0.00 4.51
27 28 4.062991 CGTTATGAAGCTACCCATTACCC 58.937 47.826 0.00 0.00 0.00 3.69
28 29 4.062991 CCGTTATGAAGCTACCCATTACC 58.937 47.826 0.00 0.00 0.00 2.85
29 30 3.497262 GCCGTTATGAAGCTACCCATTAC 59.503 47.826 0.00 0.00 0.00 1.89
30 31 3.735591 GCCGTTATGAAGCTACCCATTA 58.264 45.455 0.00 0.00 0.00 1.90
31 32 2.572290 GCCGTTATGAAGCTACCCATT 58.428 47.619 0.00 0.00 0.00 3.16
32 33 1.540363 CGCCGTTATGAAGCTACCCAT 60.540 52.381 0.00 0.00 0.00 4.00
33 34 0.179094 CGCCGTTATGAAGCTACCCA 60.179 55.000 0.00 0.00 0.00 4.51
34 35 1.496403 GCGCCGTTATGAAGCTACCC 61.496 60.000 0.00 0.00 0.00 3.69
35 36 0.808453 TGCGCCGTTATGAAGCTACC 60.808 55.000 4.18 0.00 0.00 3.18
36 37 0.300789 GTGCGCCGTTATGAAGCTAC 59.699 55.000 4.18 0.00 0.00 3.58
37 38 0.108567 TGTGCGCCGTTATGAAGCTA 60.109 50.000 4.18 0.00 0.00 3.32
38 39 1.375396 TGTGCGCCGTTATGAAGCT 60.375 52.632 4.18 0.00 0.00 3.74
39 40 1.226018 GTGTGCGCCGTTATGAAGC 60.226 57.895 4.18 0.00 0.00 3.86
40 41 1.058748 CGTGTGCGCCGTTATGAAG 59.941 57.895 4.18 0.00 0.00 3.02
41 42 3.160900 CGTGTGCGCCGTTATGAA 58.839 55.556 4.18 0.00 0.00 2.57
57 58 2.127270 GGCATCAACACGTGTGCG 60.127 61.111 24.16 16.74 44.93 5.34
58 59 1.081906 CAGGCATCAACACGTGTGC 60.082 57.895 24.16 20.44 35.06 4.57
91 92 9.083080 GGCTGCTTGTTTAACGATTTATTTATT 57.917 29.630 0.00 0.00 0.00 1.40
94 95 6.364976 GTGGCTGCTTGTTTAACGATTTATTT 59.635 34.615 0.00 0.00 0.00 1.40
103 104 2.476241 GCAATGTGGCTGCTTGTTTAAC 59.524 45.455 0.00 0.00 36.84 2.01
177 179 4.090642 CGAAATGATTAGGCAGAGTATCGC 59.909 45.833 0.00 0.00 42.67 4.58
180 182 4.993584 CAGCGAAATGATTAGGCAGAGTAT 59.006 41.667 3.71 0.00 0.00 2.12
185 187 4.825546 AATCAGCGAAATGATTAGGCAG 57.174 40.909 8.61 0.00 45.75 4.85
186 188 4.036734 GGAAATCAGCGAAATGATTAGGCA 59.963 41.667 10.22 0.00 46.64 4.75
187 189 4.276926 AGGAAATCAGCGAAATGATTAGGC 59.723 41.667 10.22 5.10 46.64 3.93
188 190 5.755813 CAGGAAATCAGCGAAATGATTAGG 58.244 41.667 10.22 0.55 46.64 2.69
194 206 2.163010 ACAGCAGGAAATCAGCGAAATG 59.837 45.455 0.00 0.00 0.00 2.32
195 207 2.163010 CACAGCAGGAAATCAGCGAAAT 59.837 45.455 0.00 0.00 0.00 2.17
200 212 0.610232 ACCCACAGCAGGAAATCAGC 60.610 55.000 0.00 0.00 0.00 4.26
202 214 1.340017 GCTACCCACAGCAGGAAATCA 60.340 52.381 0.00 0.00 41.40 2.57
203 215 1.340017 TGCTACCCACAGCAGGAAATC 60.340 52.381 0.00 0.00 46.41 2.17
264 406 3.324993 GCCTCGAAAATGGATGCAAAAA 58.675 40.909 0.00 0.00 0.00 1.94
287 429 5.405331 GATGATCACATCCATCGCATATG 57.595 43.478 0.00 0.00 44.89 1.78
341 483 4.672801 GCATGCCAAAACCAAAACGAAAAA 60.673 37.500 6.36 0.00 0.00 1.94
346 488 1.004079 GTGCATGCCAAAACCAAAACG 60.004 47.619 16.68 0.00 0.00 3.60
352 494 1.219646 CAACTGTGCATGCCAAAACC 58.780 50.000 16.68 0.00 0.00 3.27
401 547 0.179089 ATCTCCTGCGTGTCAGATGC 60.179 55.000 0.00 0.00 45.72 3.91
404 550 1.216444 GCATCTCCTGCGTGTCAGA 59.784 57.895 0.00 0.00 45.72 3.27
431 577 3.260884 GGTCTGATCTGGAACTGTGGTTA 59.739 47.826 0.00 0.00 35.58 2.85
438 584 1.202582 CGAACGGTCTGATCTGGAACT 59.797 52.381 0.00 0.00 0.00 3.01
472 618 1.873698 AGCGAGGTCTTGCGTTAAAA 58.126 45.000 4.71 0.00 44.57 1.52
473 619 2.728690 TAGCGAGGTCTTGCGTTAAA 57.271 45.000 4.71 0.00 44.57 1.52
474 620 2.953466 ATAGCGAGGTCTTGCGTTAA 57.047 45.000 4.71 0.00 44.57 2.01
475 621 4.579454 ATTATAGCGAGGTCTTGCGTTA 57.421 40.909 4.71 0.00 44.57 3.18
478 624 3.243336 GGTATTATAGCGAGGTCTTGCG 58.757 50.000 4.71 0.00 44.57 4.85
479 625 4.252971 TGGTATTATAGCGAGGTCTTGC 57.747 45.455 2.07 2.07 40.27 4.01
480 626 6.292168 CGTTTTGGTATTATAGCGAGGTCTTG 60.292 42.308 0.00 0.00 0.00 3.02
481 627 5.751990 CGTTTTGGTATTATAGCGAGGTCTT 59.248 40.000 0.00 0.00 0.00 3.01
482 628 5.068198 TCGTTTTGGTATTATAGCGAGGTCT 59.932 40.000 0.00 0.00 0.00 3.85
483 629 5.284079 TCGTTTTGGTATTATAGCGAGGTC 58.716 41.667 0.00 0.00 0.00 3.85
484 630 5.266733 TCGTTTTGGTATTATAGCGAGGT 57.733 39.130 0.00 0.00 0.00 3.85
485 631 6.034683 GCTATCGTTTTGGTATTATAGCGAGG 59.965 42.308 0.00 0.00 34.38 4.63
486 632 6.807230 AGCTATCGTTTTGGTATTATAGCGAG 59.193 38.462 0.00 0.00 44.04 5.03
487 633 6.584942 CAGCTATCGTTTTGGTATTATAGCGA 59.415 38.462 0.00 0.00 44.04 4.93
488 634 6.669977 GCAGCTATCGTTTTGGTATTATAGCG 60.670 42.308 0.00 0.00 44.04 4.26
509 655 3.960998 CGCGATCGTACGTGCAGC 61.961 66.667 17.81 18.35 37.00 5.25
528 674 5.046950 TGTGTATGTGTGTATTCTGCCTACA 60.047 40.000 0.00 0.00 0.00 2.74
537 683 6.800543 TGCAGTTTTTGTGTATGTGTGTATT 58.199 32.000 0.00 0.00 0.00 1.89
557 713 2.642706 AAAACGCGTGCTGTTTTGCAG 61.643 47.619 14.98 0.00 45.15 4.41
568 725 2.838646 GCATGTGCAAAACGCGTG 59.161 55.556 14.98 0.34 46.97 5.34
610 767 0.811616 GGCTCGTTTGCTCGATCCAT 60.812 55.000 11.95 0.00 43.02 3.41
611 768 1.447838 GGCTCGTTTGCTCGATCCA 60.448 57.895 11.95 0.00 43.02 3.41
765 944 6.065374 CAGGAAGCTTCAGTAGAGTATAGGA 58.935 44.000 27.02 0.00 0.00 2.94
834 1013 2.358267 CTGACAGGGACCTACGTACATC 59.642 54.545 0.00 0.00 0.00 3.06
836 1015 1.615116 CCTGACAGGGACCTACGTACA 60.615 57.143 14.26 0.00 0.00 2.90
838 1017 0.682209 GCCTGACAGGGACCTACGTA 60.682 60.000 23.09 0.00 35.37 3.57
967 1146 0.533951 GATTAGGTGTCCGGTCCGTT 59.466 55.000 11.06 0.00 0.00 4.44
968 1147 1.325476 GGATTAGGTGTCCGGTCCGT 61.325 60.000 11.06 0.00 0.00 4.69
989 1168 3.244112 GTATATATACATCGGCCAGGGGC 60.244 52.174 16.50 1.02 39.39 5.80
1000 1179 6.561614 GTGCTACGCTGGTGTATATATACAT 58.438 40.000 24.67 12.63 44.25 2.29
1019 1198 2.731571 GGATGGTCTGCCCGTGCTA 61.732 63.158 0.00 0.00 37.58 3.49
1060 1251 2.106566 TGTGCTGTGTTTGGAAATGGT 58.893 42.857 0.00 0.00 0.00 3.55
1312 1535 0.903236 AGGAACGGGAAGAAGTAGCC 59.097 55.000 0.00 0.00 0.00 3.93
1543 1766 2.126463 GTCACTAGCTCACGCGCA 60.126 61.111 5.73 0.00 42.32 6.09
1558 1781 4.874966 ACGTAGTGGTAGATACAGTGAGTC 59.125 45.833 0.00 0.00 42.51 3.36
1559 1782 4.841422 ACGTAGTGGTAGATACAGTGAGT 58.159 43.478 0.00 0.00 42.51 3.41
1579 1802 1.442857 GAGTCTGCAGTCGGTCACG 60.443 63.158 14.67 0.00 42.74 4.35
1709 1932 4.060038 GGGTTCTCCGTCGCCGAA 62.060 66.667 0.00 0.00 35.63 4.30
1736 1959 2.583441 CGTGAAGGCCAGGTGGAGA 61.583 63.158 5.01 0.00 37.39 3.71
1790 2013 3.315142 GACGTGCCTGAGGATGCCA 62.315 63.158 0.65 0.00 0.00 4.92
2046 2308 5.239744 CCATCTCAGTAAGTACGTGCTCTAT 59.760 44.000 6.63 0.00 0.00 1.98
2047 2309 4.575236 CCATCTCAGTAAGTACGTGCTCTA 59.425 45.833 6.63 0.00 0.00 2.43
2048 2310 3.378742 CCATCTCAGTAAGTACGTGCTCT 59.621 47.826 6.63 0.00 0.00 4.09
2049 2311 3.377485 TCCATCTCAGTAAGTACGTGCTC 59.623 47.826 6.63 0.00 0.00 4.26
2050 2312 3.353557 TCCATCTCAGTAAGTACGTGCT 58.646 45.455 0.00 0.00 0.00 4.40
2051 2313 3.777465 TCCATCTCAGTAAGTACGTGC 57.223 47.619 0.00 0.00 0.00 5.34
2052 2314 4.338400 TCCATCCATCTCAGTAAGTACGTG 59.662 45.833 0.00 0.00 0.00 4.49
2053 2315 4.533815 TCCATCCATCTCAGTAAGTACGT 58.466 43.478 0.00 0.00 0.00 3.57
2054 2316 5.465051 CATCCATCCATCTCAGTAAGTACG 58.535 45.833 0.00 0.00 0.00 3.67
2065 2327 2.092049 ACACACATGCATCCATCCATCT 60.092 45.455 0.00 0.00 0.00 2.90
2279 2542 2.263077 CCAGTAACAGACGATGAGTGC 58.737 52.381 0.00 0.00 0.00 4.40
2302 2569 6.875195 AGATGCAAGTGTCAATTATTTTTGGG 59.125 34.615 0.00 0.00 0.00 4.12
2304 2571 8.767085 ACAAGATGCAAGTGTCAATTATTTTTG 58.233 29.630 0.00 0.00 0.00 2.44
2308 2575 8.796475 AGTAACAAGATGCAAGTGTCAATTATT 58.204 29.630 0.00 0.00 0.00 1.40
2335 2602 8.613034 ACTAGCTACTAGTATGTATGTATGGGT 58.387 37.037 2.33 0.00 44.35 4.51
2348 2615 4.679373 ACGTGCCTACTAGCTACTAGTA 57.321 45.455 12.60 12.60 44.35 1.82
2350 2617 3.745458 GGTACGTGCCTACTAGCTACTAG 59.255 52.174 16.23 0.08 39.72 2.57
2351 2618 3.389329 AGGTACGTGCCTACTAGCTACTA 59.611 47.826 24.85 0.00 37.04 1.82
2352 2619 2.172293 AGGTACGTGCCTACTAGCTACT 59.828 50.000 24.85 0.00 37.04 2.57
2353 2620 2.570135 AGGTACGTGCCTACTAGCTAC 58.430 52.381 24.85 0.00 37.04 3.58
2354 2621 3.244353 CCTAGGTACGTGCCTACTAGCTA 60.244 52.174 26.33 8.50 39.94 3.32
2355 2622 2.486907 CCTAGGTACGTGCCTACTAGCT 60.487 54.545 26.33 8.65 39.94 3.32
2356 2623 1.878734 CCTAGGTACGTGCCTACTAGC 59.121 57.143 26.33 0.47 39.94 3.42
2357 2624 3.137533 GTCCTAGGTACGTGCCTACTAG 58.862 54.545 26.33 19.05 39.94 2.57
2365 2667 2.422832 GAGTTGGAGTCCTAGGTACGTG 59.577 54.545 11.33 0.00 0.00 4.49
2367 2669 2.022934 GGAGTTGGAGTCCTAGGTACG 58.977 57.143 11.33 0.00 34.81 3.67
2377 2679 0.768221 TGGGCTCTTGGAGTTGGAGT 60.768 55.000 0.00 0.00 31.39 3.85
2378 2680 0.622665 ATGGGCTCTTGGAGTTGGAG 59.377 55.000 0.00 0.00 31.39 3.86
2379 2681 1.839994 CTATGGGCTCTTGGAGTTGGA 59.160 52.381 0.00 0.00 31.39 3.53
2380 2682 1.561542 ACTATGGGCTCTTGGAGTTGG 59.438 52.381 0.00 0.00 31.39 3.77
2381 2683 3.181461 CCTACTATGGGCTCTTGGAGTTG 60.181 52.174 0.00 0.00 31.39 3.16
2382 2684 3.041946 CCTACTATGGGCTCTTGGAGTT 58.958 50.000 0.00 0.00 31.39 3.01
2459 2762 1.539827 ACGGTGCTGCAAAATTCTACC 59.460 47.619 2.77 0.00 0.00 3.18
2519 2826 2.014128 CGTCCGTTTTTCATGGCCTAT 58.986 47.619 3.32 0.00 0.00 2.57
2520 2827 1.444836 CGTCCGTTTTTCATGGCCTA 58.555 50.000 3.32 0.00 0.00 3.93
2572 2883 2.383608 GGAGCCCAGTCCCAAAGTA 58.616 57.895 0.00 0.00 0.00 2.24
2613 2925 6.669591 TGCCAGTCTAGACATATATAGCCATT 59.330 38.462 24.44 0.00 0.00 3.16
2614 2926 6.197903 TGCCAGTCTAGACATATATAGCCAT 58.802 40.000 24.44 0.00 0.00 4.40
2634 2949 2.505405 TGCACGTAATTAACCTTGCCA 58.495 42.857 0.00 0.00 34.20 4.92
2892 3230 2.343101 CCACTGCAAATCAAAGCCATG 58.657 47.619 0.00 0.00 0.00 3.66
2996 3334 7.857456 TGGGAAGTAAAGTGAGAATATTAGCA 58.143 34.615 0.00 0.00 0.00 3.49
2997 3335 8.204836 TCTGGGAAGTAAAGTGAGAATATTAGC 58.795 37.037 0.00 0.00 0.00 3.09
3118 3464 2.351253 CGAAATGGGATTTTGTCACGCA 60.351 45.455 0.00 0.00 30.69 5.24
3134 3480 1.482593 CCTACACTGGAGAGGCGAAAT 59.517 52.381 0.00 0.00 0.00 2.17
3135 3481 0.895530 CCTACACTGGAGAGGCGAAA 59.104 55.000 0.00 0.00 0.00 3.46
3146 3492 1.203523 GAGGACTGCACTCCTACACTG 59.796 57.143 14.17 0.00 41.11 3.66
3149 3497 2.309162 ACTAGAGGACTGCACTCCTACA 59.691 50.000 14.17 5.35 41.11 2.74
3150 3498 3.007473 ACTAGAGGACTGCACTCCTAC 57.993 52.381 14.17 8.69 41.11 3.18
3151 3499 3.781407 ACTACTAGAGGACTGCACTCCTA 59.219 47.826 14.17 0.49 41.11 2.94
3152 3500 2.578940 ACTACTAGAGGACTGCACTCCT 59.421 50.000 14.10 14.10 44.00 3.69
3153 3501 3.007473 ACTACTAGAGGACTGCACTCC 57.993 52.381 4.32 4.32 35.58 3.85
3155 3503 4.944930 CACTTACTACTAGAGGACTGCACT 59.055 45.833 0.00 0.00 0.00 4.40
3157 3505 4.270834 CCACTTACTACTAGAGGACTGCA 58.729 47.826 0.00 0.00 0.00 4.41
3158 3506 3.067040 GCCACTTACTACTAGAGGACTGC 59.933 52.174 0.00 0.00 0.00 4.40
3159 3507 3.312973 CGCCACTTACTACTAGAGGACTG 59.687 52.174 0.00 0.00 0.00 3.51
3160 3508 3.543665 CGCCACTTACTACTAGAGGACT 58.456 50.000 0.00 0.00 0.00 3.85
3161 3509 2.033174 GCGCCACTTACTACTAGAGGAC 59.967 54.545 0.00 0.00 0.00 3.85
3162 3510 2.295885 GCGCCACTTACTACTAGAGGA 58.704 52.381 0.00 0.00 0.00 3.71
3163 3511 2.022195 TGCGCCACTTACTACTAGAGG 58.978 52.381 4.18 0.00 0.00 3.69
3164 3512 3.377485 TCTTGCGCCACTTACTACTAGAG 59.623 47.826 4.18 0.00 0.00 2.43
3165 3513 3.349927 TCTTGCGCCACTTACTACTAGA 58.650 45.455 4.18 0.00 0.00 2.43
3166 3514 3.777465 TCTTGCGCCACTTACTACTAG 57.223 47.619 4.18 0.00 0.00 2.57
3192 3540 1.662122 GGGCACGTCATTAGTTTACCG 59.338 52.381 0.00 0.00 0.00 4.02
3266 3623 2.175499 TGGATCCATCCCTTGAATGGAC 59.825 50.000 11.44 2.57 46.03 4.02
3272 3629 2.211141 TCCATGGATCCATCCCTTGA 57.789 50.000 24.93 12.74 46.59 3.02
3275 3632 1.283347 CGATCCATGGATCCATCCCT 58.717 55.000 37.70 13.98 45.95 4.20
3278 3635 0.325933 TGGCGATCCATGGATCCATC 59.674 55.000 37.70 28.54 45.95 3.51
3346 3703 3.639561 TGGACGATTATAACAGGCTGCTA 59.360 43.478 15.89 7.35 0.00 3.49
3376 3733 3.946558 GAGTACAGTACAGAGTGGGGTAG 59.053 52.174 13.37 0.00 0.00 3.18
3381 3738 2.708051 TCCGAGTACAGTACAGAGTGG 58.292 52.381 13.37 6.88 0.00 4.00
3386 3743 2.934553 TCACGATCCGAGTACAGTACAG 59.065 50.000 13.37 6.39 0.00 2.74
3387 3744 2.674852 GTCACGATCCGAGTACAGTACA 59.325 50.000 13.37 0.00 0.00 2.90
3388 3745 2.674852 TGTCACGATCCGAGTACAGTAC 59.325 50.000 2.05 2.05 0.00 2.73
3389 3746 2.934553 CTGTCACGATCCGAGTACAGTA 59.065 50.000 0.00 0.00 33.57 2.74
3390 3747 1.738350 CTGTCACGATCCGAGTACAGT 59.262 52.381 0.00 0.00 33.57 3.55
3421 3778 1.970114 ATCGTGTCACGGTCGAGGT 60.970 57.895 24.33 0.93 42.81 3.85
3457 3819 1.448013 GGTTAGCCTCTCGTGCACC 60.448 63.158 12.15 0.00 0.00 5.01
3489 3852 2.223572 GCATGCCTTTTGGATTACGAGG 60.224 50.000 6.36 0.00 44.07 4.63
3526 3889 0.557238 AGCCATATGCACCCATGGAA 59.443 50.000 22.03 0.00 43.80 3.53
3582 3946 2.700371 ACCTGTGACTGATTGACTGACA 59.300 45.455 0.00 0.00 0.00 3.58
3679 4044 0.529337 CTCATGTGGAGTAGGCGCTG 60.529 60.000 7.64 0.00 38.90 5.18
3866 4260 5.163509 TGTGTAAAGGCACATGCTGTTTTTA 60.164 36.000 3.48 2.49 43.54 1.52
3871 4265 1.979855 TGTGTAAAGGCACATGCTGT 58.020 45.000 3.48 0.00 43.54 4.40
3932 4337 9.757859 CCGTAAACAAATATAAAAGCGTTTAGA 57.242 29.630 10.55 6.46 32.76 2.10
3933 4338 9.757859 TCCGTAAACAAATATAAAAGCGTTTAG 57.242 29.630 10.55 0.00 32.76 1.85
3934 4339 9.757859 CTCCGTAAACAAATATAAAAGCGTTTA 57.242 29.630 7.30 7.30 33.76 2.01
3935 4340 7.751793 CCTCCGTAAACAAATATAAAAGCGTTT 59.248 33.333 2.53 2.53 0.00 3.60
3936 4341 7.119553 TCCTCCGTAAACAAATATAAAAGCGTT 59.880 33.333 0.00 0.00 0.00 4.84
3937 4342 6.594937 TCCTCCGTAAACAAATATAAAAGCGT 59.405 34.615 0.00 0.00 0.00 5.07
3938 4343 7.007313 TCCTCCGTAAACAAATATAAAAGCG 57.993 36.000 0.00 0.00 0.00 4.68
3939 4344 8.456471 ACTTCCTCCGTAAACAAATATAAAAGC 58.544 33.333 0.00 0.00 0.00 3.51
3942 4347 9.086336 CGTACTTCCTCCGTAAACAAATATAAA 57.914 33.333 0.00 0.00 0.00 1.40
3943 4348 8.250332 ACGTACTTCCTCCGTAAACAAATATAA 58.750 33.333 0.00 0.00 32.22 0.98
3944 4349 7.771183 ACGTACTTCCTCCGTAAACAAATATA 58.229 34.615 0.00 0.00 32.22 0.86
3945 4350 6.633856 ACGTACTTCCTCCGTAAACAAATAT 58.366 36.000 0.00 0.00 32.22 1.28
3946 4351 6.024552 ACGTACTTCCTCCGTAAACAAATA 57.975 37.500 0.00 0.00 32.22 1.40
3947 4352 4.886579 ACGTACTTCCTCCGTAAACAAAT 58.113 39.130 0.00 0.00 32.22 2.32
3948 4353 4.320608 ACGTACTTCCTCCGTAAACAAA 57.679 40.909 0.00 0.00 32.22 2.83
3949 4354 4.518970 ACTACGTACTTCCTCCGTAAACAA 59.481 41.667 0.00 0.00 36.72 2.83
3950 4355 4.072131 ACTACGTACTTCCTCCGTAAACA 58.928 43.478 0.00 0.00 36.72 2.83
3951 4356 4.686839 ACTACGTACTTCCTCCGTAAAC 57.313 45.455 0.00 0.00 36.72 2.01
3952 4357 5.705609 AAACTACGTACTTCCTCCGTAAA 57.294 39.130 0.00 0.00 36.72 2.01
3953 4358 6.374333 ACATAAACTACGTACTTCCTCCGTAA 59.626 38.462 0.00 0.00 36.72 3.18
3954 4359 5.880332 ACATAAACTACGTACTTCCTCCGTA 59.120 40.000 0.00 0.00 36.12 4.02
3955 4360 4.702131 ACATAAACTACGTACTTCCTCCGT 59.298 41.667 0.00 0.00 38.53 4.69
3956 4361 5.032863 CACATAAACTACGTACTTCCTCCG 58.967 45.833 0.00 0.00 0.00 4.63
3957 4362 6.032717 GTCACATAAACTACGTACTTCCTCC 58.967 44.000 0.00 0.00 0.00 4.30
3958 4363 6.850555 AGTCACATAAACTACGTACTTCCTC 58.149 40.000 0.00 0.00 0.00 3.71
3959 4364 6.830873 AGTCACATAAACTACGTACTTCCT 57.169 37.500 0.00 0.00 0.00 3.36
3960 4365 6.309737 CCAAGTCACATAAACTACGTACTTCC 59.690 42.308 0.00 0.00 0.00 3.46
3961 4366 6.309737 CCCAAGTCACATAAACTACGTACTTC 59.690 42.308 0.00 0.00 0.00 3.01
3962 4367 6.161381 CCCAAGTCACATAAACTACGTACTT 58.839 40.000 0.00 0.00 0.00 2.24
3963 4368 5.337009 CCCCAAGTCACATAAACTACGTACT 60.337 44.000 0.00 0.00 0.00 2.73
3964 4369 4.866486 CCCCAAGTCACATAAACTACGTAC 59.134 45.833 0.00 0.00 0.00 3.67
3965 4370 4.081531 CCCCCAAGTCACATAAACTACGTA 60.082 45.833 0.00 0.00 0.00 3.57
3966 4371 3.307199 CCCCCAAGTCACATAAACTACGT 60.307 47.826 0.00 0.00 0.00 3.57
3967 4372 3.267483 CCCCCAAGTCACATAAACTACG 58.733 50.000 0.00 0.00 0.00 3.51
3973 4378 0.623723 GGAGCCCCCAAGTCACATAA 59.376 55.000 0.00 0.00 34.14 1.90
4037 4444 2.304761 TCCTCCATCACTTACCAACACC 59.695 50.000 0.00 0.00 0.00 4.16
4047 4454 5.759059 TCAAAATTATGCTCCTCCATCACT 58.241 37.500 0.00 0.00 0.00 3.41
4052 4459 3.290710 GGCTCAAAATTATGCTCCTCCA 58.709 45.455 0.00 0.00 0.00 3.86
4084 4494 4.216042 ACAGAAAATGACACGATGCAATCA 59.784 37.500 0.00 0.00 45.97 2.57
4311 4729 3.532641 ATTCTCCCCAAGAACAAGCTT 57.467 42.857 0.00 0.00 46.61 3.74
4424 4848 1.462541 GCGCTTTGAGACATGACGAAC 60.463 52.381 0.00 0.00 0.00 3.95
4435 4859 4.404654 GGCCGGTTGCGCTTTGAG 62.405 66.667 9.73 0.00 42.61 3.02
4469 4893 2.026641 GTGGACAATGCATGTAGCCAT 58.973 47.619 0.00 0.00 44.12 4.40
4470 4894 1.462616 GTGGACAATGCATGTAGCCA 58.537 50.000 0.00 3.19 44.12 4.75
4471 4895 0.378257 CGTGGACAATGCATGTAGCC 59.622 55.000 0.00 0.21 44.12 3.93
4472 4896 1.086696 ACGTGGACAATGCATGTAGC 58.913 50.000 0.00 0.00 44.12 3.58
4473 4897 1.202065 GCACGTGGACAATGCATGTAG 60.202 52.381 18.88 0.00 44.12 2.74
4474 4898 0.801872 GCACGTGGACAATGCATGTA 59.198 50.000 18.88 0.00 44.12 2.29
4475 4899 1.171549 TGCACGTGGACAATGCATGT 61.172 50.000 18.88 0.00 44.17 3.21
4476 4900 1.580437 TGCACGTGGACAATGCATG 59.420 52.632 18.88 0.00 44.17 4.06
4477 4901 4.077844 TGCACGTGGACAATGCAT 57.922 50.000 18.88 0.00 44.17 3.96
4478 4902 1.227793 TCTGCACGTGGACAATGCA 60.228 52.632 18.88 6.03 46.73 3.96
4479 4903 1.499056 CTCTGCACGTGGACAATGC 59.501 57.895 18.88 0.65 39.88 3.56
4480 4904 1.915614 GCCTCTGCACGTGGACAATG 61.916 60.000 18.88 2.32 37.47 2.82
4481 4905 1.672356 GCCTCTGCACGTGGACAAT 60.672 57.895 18.88 0.00 37.47 2.71
4482 4906 2.280797 GCCTCTGCACGTGGACAA 60.281 61.111 18.88 2.27 37.47 3.18
4483 4907 4.314440 GGCCTCTGCACGTGGACA 62.314 66.667 18.88 6.69 40.13 4.02
4484 4908 4.314440 TGGCCTCTGCACGTGGAC 62.314 66.667 18.88 2.06 40.13 4.02
4485 4909 4.007644 CTGGCCTCTGCACGTGGA 62.008 66.667 18.88 14.63 40.13 4.02
4502 4926 8.435931 AATAAAATAAAATAGGAGGATGGCCC 57.564 34.615 0.00 0.00 33.31 5.80
4520 4944 9.603921 CAGAACTGGGCATATCAAAAATAAAAT 57.396 29.630 0.00 0.00 0.00 1.82
4521 4945 8.592809 ACAGAACTGGGCATATCAAAAATAAAA 58.407 29.630 6.76 0.00 34.19 1.52
4522 4946 8.133024 ACAGAACTGGGCATATCAAAAATAAA 57.867 30.769 6.76 0.00 34.19 1.40
4523 4947 7.716799 ACAGAACTGGGCATATCAAAAATAA 57.283 32.000 6.76 0.00 34.19 1.40
4524 4948 7.615365 AGAACAGAACTGGGCATATCAAAAATA 59.385 33.333 6.76 0.00 34.19 1.40
4525 4949 6.438425 AGAACAGAACTGGGCATATCAAAAAT 59.562 34.615 6.76 0.00 34.19 1.82
4526 4950 5.774690 AGAACAGAACTGGGCATATCAAAAA 59.225 36.000 6.76 0.00 34.19 1.94
4527 4951 5.183713 CAGAACAGAACTGGGCATATCAAAA 59.816 40.000 6.76 0.00 34.19 2.44
4528 4952 4.701651 CAGAACAGAACTGGGCATATCAAA 59.298 41.667 6.76 0.00 34.19 2.69
4529 4953 4.019411 TCAGAACAGAACTGGGCATATCAA 60.019 41.667 6.76 0.00 36.22 2.57
4530 4954 3.519107 TCAGAACAGAACTGGGCATATCA 59.481 43.478 6.76 0.00 36.22 2.15
4531 4955 4.142609 TCAGAACAGAACTGGGCATATC 57.857 45.455 6.76 0.00 36.22 1.63
4532 4956 4.574674 TTCAGAACAGAACTGGGCATAT 57.425 40.909 6.76 0.00 36.22 1.78
4533 4957 4.574674 ATTCAGAACAGAACTGGGCATA 57.425 40.909 6.76 0.00 36.22 3.14
4534 4958 2.957402 TTCAGAACAGAACTGGGCAT 57.043 45.000 6.76 0.00 36.22 4.40
4535 4959 2.957402 ATTCAGAACAGAACTGGGCA 57.043 45.000 6.76 0.00 36.22 5.36
4536 4960 3.190118 CAGAATTCAGAACAGAACTGGGC 59.810 47.826 8.44 0.00 36.22 5.36
4537 4961 4.645535 TCAGAATTCAGAACAGAACTGGG 58.354 43.478 8.44 0.00 36.22 4.45
4538 4962 7.064371 CAGTATCAGAATTCAGAACAGAACTGG 59.936 40.741 8.44 0.00 36.22 4.00
4539 4963 7.412781 GCAGTATCAGAATTCAGAACAGAACTG 60.413 40.741 8.44 14.28 36.80 3.16
4540 4964 6.593382 GCAGTATCAGAATTCAGAACAGAACT 59.407 38.462 8.44 3.42 0.00 3.01
4541 4965 6.369890 TGCAGTATCAGAATTCAGAACAGAAC 59.630 38.462 8.44 1.34 0.00 3.01
4542 4966 6.466812 TGCAGTATCAGAATTCAGAACAGAA 58.533 36.000 8.44 0.00 0.00 3.02
4596 5024 6.314896 CAGACCAAGGAAGCAGTAATTCTAAG 59.685 42.308 0.00 0.00 0.00 2.18
4602 5030 4.042187 AGTTCAGACCAAGGAAGCAGTAAT 59.958 41.667 0.00 0.00 0.00 1.89
4603 5031 3.391296 AGTTCAGACCAAGGAAGCAGTAA 59.609 43.478 0.00 0.00 0.00 2.24
4604 5032 2.972713 AGTTCAGACCAAGGAAGCAGTA 59.027 45.455 0.00 0.00 0.00 2.74
4638 5066 5.772825 TCAATTCTTGGTTCAACTTGGAG 57.227 39.130 0.00 0.00 0.00 3.86
4664 5092 7.173218 CAGAGCACTAAGAAATGGTTTGTTAGA 59.827 37.037 19.73 0.00 44.67 2.10
4671 5099 5.241728 GGTTTCAGAGCACTAAGAAATGGTT 59.758 40.000 1.14 0.00 33.18 3.67
4891 5324 4.444056 GTGCAAATGTTGTGGTGAATGTAC 59.556 41.667 0.00 0.00 0.00 2.90
4911 5350 3.000041 TCATTCAGTCCACATAACGTGC 59.000 45.455 0.00 0.00 44.91 5.34
4922 5361 2.600731 CGTCAGTCAGTCATTCAGTCC 58.399 52.381 0.00 0.00 0.00 3.85
4925 5364 1.354040 GGCGTCAGTCAGTCATTCAG 58.646 55.000 0.00 0.00 0.00 3.02
4929 5368 0.033504 AAACGGCGTCAGTCAGTCAT 59.966 50.000 15.17 0.00 0.00 3.06
4931 5370 0.232303 CAAAACGGCGTCAGTCAGTC 59.768 55.000 15.17 0.00 0.00 3.51
5103 5550 2.278857 CAGCGGCAGTACTAGCGG 60.279 66.667 15.55 15.55 35.67 5.52
5114 5561 1.644786 ATTTACTTCGGTGCAGCGGC 61.645 55.000 34.92 0.31 41.68 6.53
5115 5562 0.802494 AATTTACTTCGGTGCAGCGG 59.198 50.000 34.92 23.30 0.00 5.52
5116 5563 2.413796 TGTAATTTACTTCGGTGCAGCG 59.586 45.455 31.22 31.22 0.00 5.18
5117 5564 3.425758 GGTGTAATTTACTTCGGTGCAGC 60.426 47.826 5.64 5.64 0.00 5.25
5118 5565 3.181524 CGGTGTAATTTACTTCGGTGCAG 60.182 47.826 7.99 0.00 0.00 4.41
5119 5566 2.737783 CGGTGTAATTTACTTCGGTGCA 59.262 45.455 7.99 0.00 0.00 4.57
5120 5567 2.094734 CCGGTGTAATTTACTTCGGTGC 59.905 50.000 21.68 0.00 38.82 5.01
5121 5568 2.094734 GCCGGTGTAATTTACTTCGGTG 59.905 50.000 26.09 13.34 42.40 4.94
5122 5569 2.349590 GCCGGTGTAATTTACTTCGGT 58.650 47.619 26.09 0.00 42.40 4.69
5125 5572 4.389687 TCTTTCGCCGGTGTAATTTACTTC 59.610 41.667 16.01 2.00 0.00 3.01
5151 5598 1.402325 CGAGCGAATGTGGTGTCAGTA 60.402 52.381 0.00 0.00 0.00 2.74
5153 5600 1.959899 GCGAGCGAATGTGGTGTCAG 61.960 60.000 0.00 0.00 0.00 3.51
5155 5602 1.959899 CTGCGAGCGAATGTGGTGTC 61.960 60.000 0.00 0.00 0.00 3.67
5156 5603 2.029288 CTGCGAGCGAATGTGGTGT 61.029 57.895 0.00 0.00 0.00 4.16
5158 5605 2.434884 CCTGCGAGCGAATGTGGT 60.435 61.111 0.00 0.00 0.00 4.16
5160 5607 1.699656 CCTTCCTGCGAGCGAATGTG 61.700 60.000 0.00 0.00 0.00 3.21
5161 5608 1.448540 CCTTCCTGCGAGCGAATGT 60.449 57.895 0.00 0.00 0.00 2.71
5162 5609 2.176273 CCCTTCCTGCGAGCGAATG 61.176 63.158 0.00 0.00 0.00 2.67
5163 5610 1.690219 ATCCCTTCCTGCGAGCGAAT 61.690 55.000 0.00 0.00 0.00 3.34
5164 5611 2.298158 GATCCCTTCCTGCGAGCGAA 62.298 60.000 0.00 0.00 0.00 4.70
5166 5613 2.279784 GATCCCTTCCTGCGAGCG 60.280 66.667 0.00 0.00 0.00 5.03
5167 5614 2.279784 CGATCCCTTCCTGCGAGC 60.280 66.667 0.00 0.00 0.00 5.03
5169 5616 3.849951 GGCGATCCCTTCCTGCGA 61.850 66.667 0.00 0.00 0.00 5.10
5732 6198 1.043673 AGTAGATGGGCGAGTCCACC 61.044 60.000 0.00 0.00 39.97 4.61
5911 6407 2.827921 AGTTTCAGATCCAATGCCCAAC 59.172 45.455 0.00 0.00 0.00 3.77
5933 6462 0.459237 CAGCTGCGGAGAGAAACGAT 60.459 55.000 8.65 0.00 0.00 3.73
5990 6519 1.203237 TCCAGGGTCTTCTTGAGCTCT 60.203 52.381 16.19 0.00 42.40 4.09
6068 6597 8.178964 GGTTCGTGACAAAAGCATTACATATAA 58.821 33.333 0.00 0.00 0.00 0.98
6072 6601 4.277174 TGGTTCGTGACAAAAGCATTACAT 59.723 37.500 0.84 0.00 0.00 2.29
6075 6604 4.320861 CCATGGTTCGTGACAAAAGCATTA 60.321 41.667 2.57 0.00 40.54 1.90
6077 6606 2.030007 CCATGGTTCGTGACAAAAGCAT 60.030 45.455 2.57 9.54 42.57 3.79
6078 6607 1.336440 CCATGGTTCGTGACAAAAGCA 59.664 47.619 2.57 6.27 37.30 3.91
6079 6608 1.930371 GCCATGGTTCGTGACAAAAGC 60.930 52.381 14.67 0.00 0.00 3.51
6083 6612 0.107643 TCAGCCATGGTTCGTGACAA 59.892 50.000 14.67 0.00 0.00 3.18
6089 6618 2.636830 AGAGAAATCAGCCATGGTTCG 58.363 47.619 14.67 2.02 0.00 3.95
6223 6753 4.681978 AAGTCGCACTCCGCCACC 62.682 66.667 0.00 0.00 37.30 4.61
6278 6808 0.251354 ATGTTCTCATGCGAGGCACT 59.749 50.000 0.00 0.00 43.04 4.40
6335 6870 1.708193 CGATCTCGGCTTGCATTGCA 61.708 55.000 7.38 7.38 34.14 4.08
6481 7018 7.219154 GTCAGTCTCGTACTATCATTTGTTCAG 59.781 40.741 0.00 0.00 35.76 3.02
6505 7044 2.587522 AGAAGCAAGTTTGGGAAGGTC 58.412 47.619 0.00 0.00 0.00 3.85
6540 7079 0.254178 ATGGACAGACACCTGATGGC 59.746 55.000 0.00 0.00 43.02 4.40
6542 7081 2.362736 CCAATGGACAGACACCTGATG 58.637 52.381 0.00 0.00 43.02 3.07
6543 7082 1.340405 GCCAATGGACAGACACCTGAT 60.340 52.381 2.05 0.00 43.02 2.90
6544 7083 0.036732 GCCAATGGACAGACACCTGA 59.963 55.000 2.05 0.00 43.02 3.86
6545 7084 0.250858 TGCCAATGGACAGACACCTG 60.251 55.000 2.05 0.00 45.76 4.00
6546 7085 0.478072 TTGCCAATGGACAGACACCT 59.522 50.000 2.05 0.00 0.00 4.00
6549 7088 4.686191 AATTTTTGCCAATGGACAGACA 57.314 36.364 2.05 0.00 0.00 3.41
6550 7089 6.146021 CAGTAAATTTTTGCCAATGGACAGAC 59.854 38.462 2.05 0.00 0.00 3.51
6552 7091 5.106987 GCAGTAAATTTTTGCCAATGGACAG 60.107 40.000 2.05 0.00 31.79 3.51
6553 7092 4.754114 GCAGTAAATTTTTGCCAATGGACA 59.246 37.500 2.05 0.00 31.79 4.02
6554 7093 4.996758 AGCAGTAAATTTTTGCCAATGGAC 59.003 37.500 18.33 0.00 38.58 4.02
6555 7094 5.226194 AGCAGTAAATTTTTGCCAATGGA 57.774 34.783 18.33 0.00 38.58 3.41
6556 7095 5.351189 GGTAGCAGTAAATTTTTGCCAATGG 59.649 40.000 18.33 0.00 38.58 3.16
6559 7098 4.591072 AGGGTAGCAGTAAATTTTTGCCAA 59.409 37.500 18.33 8.81 38.58 4.52
6562 7101 9.863845 TTAATTAGGGTAGCAGTAAATTTTTGC 57.136 29.630 15.64 15.64 38.09 3.68
6566 7105 9.185680 CCTGTTAATTAGGGTAGCAGTAAATTT 57.814 33.333 0.00 0.00 30.28 1.82
6569 7108 6.117488 GCCTGTTAATTAGGGTAGCAGTAAA 58.883 40.000 9.87 0.00 35.80 2.01
6570 7109 5.190132 TGCCTGTTAATTAGGGTAGCAGTAA 59.810 40.000 9.87 0.00 35.80 2.24
6571 7110 4.717778 TGCCTGTTAATTAGGGTAGCAGTA 59.282 41.667 9.87 0.00 35.80 2.74
6573 7112 4.150897 TGCCTGTTAATTAGGGTAGCAG 57.849 45.455 9.87 0.00 35.80 4.24
6575 7114 5.130350 TGAATGCCTGTTAATTAGGGTAGC 58.870 41.667 9.87 0.00 35.80 3.58
6576 7115 6.601613 TGTTGAATGCCTGTTAATTAGGGTAG 59.398 38.462 9.87 0.00 35.80 3.18
6577 7116 6.486056 TGTTGAATGCCTGTTAATTAGGGTA 58.514 36.000 9.87 0.00 35.80 3.69
6578 7117 5.329399 TGTTGAATGCCTGTTAATTAGGGT 58.671 37.500 9.87 0.00 35.80 4.34
6662 7201 9.893305 GTTATTTGTAGTCTGCAAGTGTTAAAT 57.107 29.630 8.62 0.00 33.76 1.40
6665 7204 6.993308 TGGTTATTTGTAGTCTGCAAGTGTTA 59.007 34.615 8.62 0.00 33.76 2.41
6682 7240 6.916360 ATGTGTCTGTCCATTTGGTTATTT 57.084 33.333 0.00 0.00 36.34 1.40
6692 7250 7.397221 TGATCTTTTCTTATGTGTCTGTCCAT 58.603 34.615 0.00 0.00 0.00 3.41
6694 7252 7.099764 TCTGATCTTTTCTTATGTGTCTGTCC 58.900 38.462 0.00 0.00 0.00 4.02
6696 7254 7.901029 TCTCTGATCTTTTCTTATGTGTCTGT 58.099 34.615 0.00 0.00 0.00 3.41
6698 7256 8.592809 ACTTCTCTGATCTTTTCTTATGTGTCT 58.407 33.333 0.00 0.00 0.00 3.41
6699 7257 8.770438 ACTTCTCTGATCTTTTCTTATGTGTC 57.230 34.615 0.00 0.00 0.00 3.67
6711 7269 9.702253 TTTGGTAGTCTATACTTCTCTGATCTT 57.298 33.333 0.00 0.00 37.15 2.40
6727 7288 7.004086 TCTTTCATGTTGGAATTTGGTAGTCT 58.996 34.615 0.00 0.00 0.00 3.24
6754 7315 6.293407 CCCTTTTACAATATGCGGATACACTG 60.293 42.308 0.00 0.01 0.00 3.66
6763 7324 3.283751 TCACCCCCTTTTACAATATGCG 58.716 45.455 0.00 0.00 0.00 4.73
6764 7325 5.669164 TTTCACCCCCTTTTACAATATGC 57.331 39.130 0.00 0.00 0.00 3.14
6771 7332 7.787904 AGGGATATAATTTTCACCCCCTTTTAC 59.212 37.037 0.00 0.00 39.78 2.01
6772 7333 7.787424 CAGGGATATAATTTTCACCCCCTTTTA 59.213 37.037 0.00 0.00 40.72 1.52
6780 7344 8.138074 GCTTCTTTCAGGGATATAATTTTCACC 58.862 37.037 0.00 0.00 0.00 4.02
6833 7397 0.603707 TGCCCTTCGCTGTTTCTCTG 60.604 55.000 0.00 0.00 38.78 3.35
6941 7516 1.376543 ACAAGGAGCTCATGCATTCG 58.623 50.000 17.19 0.00 42.74 3.34
7015 7590 2.494073 ACTGAGTCTTGATTCGGAGTCC 59.506 50.000 0.00 0.00 32.63 3.85
7017 7592 3.057174 GTGACTGAGTCTTGATTCGGAGT 60.057 47.826 14.42 0.00 33.15 3.85
7018 7593 3.192422 AGTGACTGAGTCTTGATTCGGAG 59.808 47.826 14.42 0.00 33.15 4.63
7019 7594 3.057245 CAGTGACTGAGTCTTGATTCGGA 60.057 47.826 14.42 0.00 32.44 4.55
7021 7596 3.906998 ACAGTGACTGAGTCTTGATTCG 58.093 45.455 20.97 3.83 35.18 3.34
7022 7597 6.425504 CAAAACAGTGACTGAGTCTTGATTC 58.574 40.000 20.97 3.60 35.18 2.52
7024 7599 4.818546 CCAAAACAGTGACTGAGTCTTGAT 59.181 41.667 20.97 8.89 35.18 2.57
7025 7600 4.191544 CCAAAACAGTGACTGAGTCTTGA 58.808 43.478 20.97 0.00 35.18 3.02
7026 7601 3.313526 CCCAAAACAGTGACTGAGTCTTG 59.686 47.826 20.97 14.67 35.18 3.02
7030 7649 1.750682 GCCCCAAAACAGTGACTGAGT 60.751 52.381 20.97 3.51 35.18 3.41
7034 7653 2.193536 GCGCCCCAAAACAGTGACT 61.194 57.895 0.00 0.00 0.00 3.41
7039 7658 2.027460 GTGTGCGCCCCAAAACAG 59.973 61.111 4.18 0.00 0.00 3.16
7244 7863 0.977395 AGAAAGGGTCGGAGAAGGTG 59.023 55.000 0.00 0.00 39.69 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.