Multiple sequence alignment - TraesCS4B01G270900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G270900 chr4B 100.000 3561 0 0 1 3561 546977796 546981356 0 6577
1 TraesCS4B01G270900 chr4B 94.521 876 43 3 1 872 521577187 521576313 0 1347
2 TraesCS4B01G270900 chrUn 97.027 1749 51 1 881 2629 86478380 86480127 0 2940
3 TraesCS4B01G270900 chrUn 96.914 1750 52 2 881 2629 186191089 186189341 0 2931
4 TraesCS4B01G270900 chrUn 97.749 933 21 0 2629 3561 257937196 257938128 0 1607
5 TraesCS4B01G270900 chrUn 97.642 933 22 0 2629 3561 233532704 233531772 0 1602
6 TraesCS4B01G270900 chr7A 96.970 1749 52 1 881 2629 60242708 60240961 0 2935
7 TraesCS4B01G270900 chr7A 96.857 1750 53 2 881 2629 60154771 60156519 0 2926
8 TraesCS4B01G270900 chr7A 96.455 1749 61 1 881 2629 120880773 120882520 0 2885
9 TraesCS4B01G270900 chr7A 97.964 933 19 0 2629 3561 4935350 4934418 0 1618
10 TraesCS4B01G270900 chr7A 97.428 933 24 0 2629 3561 60103906 60102974 0 1591
11 TraesCS4B01G270900 chr1A 96.857 1750 53 2 881 2629 112004581 112002833 0 2926
12 TraesCS4B01G270900 chr7B 96.855 1749 54 1 881 2629 743006390 743008137 0 2924
13 TraesCS4B01G270900 chr7B 93.785 885 50 3 1 881 88720189 88721072 0 1325
14 TraesCS4B01G270900 chr7D 96.800 1750 53 3 881 2629 579030060 579031807 0 2918
15 TraesCS4B01G270900 chr7D 97.749 933 20 1 2629 3561 382105763 382104832 0 1605
16 TraesCS4B01G270900 chr1D 96.457 1750 56 6 881 2629 212467539 212465795 0 2883
17 TraesCS4B01G270900 chr2D 97.856 933 20 0 2629 3561 53917328 53916396 0 1613
18 TraesCS4B01G270900 chr2D 97.856 933 20 0 2629 3561 637316501 637315569 0 1613
19 TraesCS4B01G270900 chr3D 97.428 933 24 0 2629 3561 145415938 145416870 0 1591
20 TraesCS4B01G270900 chr5A 97.320 933 25 0 2629 3561 73034687 73035619 0 1585
21 TraesCS4B01G270900 chr3B 94.482 888 41 5 1 881 354005972 354005086 0 1362
22 TraesCS4B01G270900 chr2B 94.641 877 43 2 1 874 141196700 141197575 0 1356
23 TraesCS4B01G270900 chr2B 94.104 882 48 2 1 879 528343746 528344626 0 1338
24 TraesCS4B01G270900 chr2B 94.005 884 49 2 1 881 423793785 423794667 0 1336
25 TraesCS4B01G270900 chr2B 93.891 884 51 1 1 881 136792035 136791152 0 1330
26 TraesCS4B01G270900 chr5B 93.998 883 50 1 2 881 205625567 205624685 0 1334
27 TraesCS4B01G270900 chr5B 93.785 885 49 3 1 881 174516787 174517669 0 1325


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G270900 chr4B 546977796 546981356 3560 False 6577 6577 100.000 1 3561 1 chr4B.!!$F1 3560
1 TraesCS4B01G270900 chr4B 521576313 521577187 874 True 1347 1347 94.521 1 872 1 chr4B.!!$R1 871
2 TraesCS4B01G270900 chrUn 86478380 86480127 1747 False 2940 2940 97.027 881 2629 1 chrUn.!!$F1 1748
3 TraesCS4B01G270900 chrUn 186189341 186191089 1748 True 2931 2931 96.914 881 2629 1 chrUn.!!$R1 1748
4 TraesCS4B01G270900 chrUn 257937196 257938128 932 False 1607 1607 97.749 2629 3561 1 chrUn.!!$F2 932
5 TraesCS4B01G270900 chrUn 233531772 233532704 932 True 1602 1602 97.642 2629 3561 1 chrUn.!!$R2 932
6 TraesCS4B01G270900 chr7A 60240961 60242708 1747 True 2935 2935 96.970 881 2629 1 chr7A.!!$R3 1748
7 TraesCS4B01G270900 chr7A 60154771 60156519 1748 False 2926 2926 96.857 881 2629 1 chr7A.!!$F1 1748
8 TraesCS4B01G270900 chr7A 120880773 120882520 1747 False 2885 2885 96.455 881 2629 1 chr7A.!!$F2 1748
9 TraesCS4B01G270900 chr7A 4934418 4935350 932 True 1618 1618 97.964 2629 3561 1 chr7A.!!$R1 932
10 TraesCS4B01G270900 chr7A 60102974 60103906 932 True 1591 1591 97.428 2629 3561 1 chr7A.!!$R2 932
11 TraesCS4B01G270900 chr1A 112002833 112004581 1748 True 2926 2926 96.857 881 2629 1 chr1A.!!$R1 1748
12 TraesCS4B01G270900 chr7B 743006390 743008137 1747 False 2924 2924 96.855 881 2629 1 chr7B.!!$F2 1748
13 TraesCS4B01G270900 chr7B 88720189 88721072 883 False 1325 1325 93.785 1 881 1 chr7B.!!$F1 880
14 TraesCS4B01G270900 chr7D 579030060 579031807 1747 False 2918 2918 96.800 881 2629 1 chr7D.!!$F1 1748
15 TraesCS4B01G270900 chr7D 382104832 382105763 931 True 1605 1605 97.749 2629 3561 1 chr7D.!!$R1 932
16 TraesCS4B01G270900 chr1D 212465795 212467539 1744 True 2883 2883 96.457 881 2629 1 chr1D.!!$R1 1748
17 TraesCS4B01G270900 chr2D 53916396 53917328 932 True 1613 1613 97.856 2629 3561 1 chr2D.!!$R1 932
18 TraesCS4B01G270900 chr2D 637315569 637316501 932 True 1613 1613 97.856 2629 3561 1 chr2D.!!$R2 932
19 TraesCS4B01G270900 chr3D 145415938 145416870 932 False 1591 1591 97.428 2629 3561 1 chr3D.!!$F1 932
20 TraesCS4B01G270900 chr5A 73034687 73035619 932 False 1585 1585 97.320 2629 3561 1 chr5A.!!$F1 932
21 TraesCS4B01G270900 chr3B 354005086 354005972 886 True 1362 1362 94.482 1 881 1 chr3B.!!$R1 880
22 TraesCS4B01G270900 chr2B 141196700 141197575 875 False 1356 1356 94.641 1 874 1 chr2B.!!$F1 873
23 TraesCS4B01G270900 chr2B 528343746 528344626 880 False 1338 1338 94.104 1 879 1 chr2B.!!$F3 878
24 TraesCS4B01G270900 chr2B 423793785 423794667 882 False 1336 1336 94.005 1 881 1 chr2B.!!$F2 880
25 TraesCS4B01G270900 chr2B 136791152 136792035 883 True 1330 1330 93.891 1 881 1 chr2B.!!$R1 880
26 TraesCS4B01G270900 chr5B 205624685 205625567 882 True 1334 1334 93.998 2 881 1 chr5B.!!$R1 879
27 TraesCS4B01G270900 chr5B 174516787 174517669 882 False 1325 1325 93.785 1 881 1 chr5B.!!$F1 880

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
762 773 0.032678 ACACAACAGAGAGGTCAGCG 59.967 55.0 0.0 0.0 0.0 5.18 F
1651 1662 0.804989 CTTCGGTCATCCAAAGGTGC 59.195 55.0 0.0 0.0 0.0 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2260 2271 0.250209 CTCAGAGCATTCCATCCGGG 60.250 60.0 0.00 0.00 38.37 5.73 R
3186 3199 0.178941 AGTACCTGGACGGACAAGGT 60.179 55.0 11.27 11.27 36.31 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
111 114 1.162698 CTACTCCTGGTCGTCGTCAA 58.837 55.000 0.00 0.00 0.00 3.18
113 116 0.966920 ACTCCTGGTCGTCGTCAATT 59.033 50.000 0.00 0.00 0.00 2.32
140 143 1.316651 CGTAGTAGTAGGCACCTCCC 58.683 60.000 0.00 0.00 34.51 4.30
152 155 1.843368 CACCTCCCGTGTAGTAGGAA 58.157 55.000 0.00 0.00 37.73 3.36
221 224 3.868754 GCGACAACCAGGTAGAAAGGAAT 60.869 47.826 0.00 0.00 0.00 3.01
380 386 3.547746 GGGGATAGCTAGTCCTATCGAG 58.452 54.545 16.79 0.00 42.89 4.04
433 439 5.691305 CAGCATGTAGAAGAGAGTAGATTGC 59.309 44.000 0.00 0.00 0.00 3.56
497 503 3.402681 CCCCTCATCGCCCTGTGT 61.403 66.667 0.00 0.00 0.00 3.72
503 509 0.396435 TCATCGCCCTGTGTGAAAGT 59.604 50.000 0.00 0.00 36.97 2.66
546 552 5.278315 GGAACTTGTCTGGGTGTGTTTTATC 60.278 44.000 0.00 0.00 0.00 1.75
582 588 7.786046 TCTAGTTGTCATAAGGTCAAGGTAA 57.214 36.000 0.00 0.00 0.00 2.85
743 754 3.075005 GTCGCAGCCCCACCTAGA 61.075 66.667 0.00 0.00 0.00 2.43
762 773 0.032678 ACACAACAGAGAGGTCAGCG 59.967 55.000 0.00 0.00 0.00 5.18
853 864 3.019003 GCCGGAAGCAGACCTAGCA 62.019 63.158 5.05 0.00 42.97 3.49
948 959 8.367660 TGGTTTGATGTCTCTTCTCTACTAAT 57.632 34.615 0.00 0.00 0.00 1.73
1028 1039 2.961526 TGCTTCTCCGTACTGATTCC 57.038 50.000 0.00 0.00 0.00 3.01
1049 1060 1.052124 ATGGAATTAGCCCGACCCGA 61.052 55.000 0.00 0.00 0.00 5.14
1084 1095 6.953520 TCTTGGTGGGAATCATCAACTTTATT 59.046 34.615 0.00 0.00 41.19 1.40
1087 1098 8.837099 TGGTGGGAATCATCAACTTTATTATT 57.163 30.769 0.00 0.00 32.74 1.40
1154 1165 2.105306 TGCCAGTGATGATAGGTGGATG 59.895 50.000 0.00 0.00 0.00 3.51
1172 1183 5.010617 GTGGATGTGGTAATTGGTTTGTTCT 59.989 40.000 0.00 0.00 0.00 3.01
1444 1455 1.621317 TCTTCAACATGCGTGGACCTA 59.379 47.619 11.36 0.00 0.00 3.08
1530 1541 1.117150 TATCACTTCCGGTACTGGCC 58.883 55.000 16.58 0.00 0.00 5.36
1645 1656 2.940994 TTGGTTCTTCGGTCATCCAA 57.059 45.000 0.00 0.00 33.42 3.53
1651 1662 0.804989 CTTCGGTCATCCAAAGGTGC 59.195 55.000 0.00 0.00 0.00 5.01
1665 1676 6.899089 TCCAAAGGTGCATATTCTCATTCTA 58.101 36.000 0.00 0.00 0.00 2.10
1675 1686 8.659527 TGCATATTCTCATTCTACCTGGATTTA 58.340 33.333 0.00 0.00 0.00 1.40
1701 1712 8.674607 AGTATTATTAGTCATATCGCATCGACA 58.325 33.333 0.00 0.00 39.18 4.35
1735 1746 1.818522 CGGTCTTCGGGTATCTAGGCT 60.819 57.143 0.00 0.00 34.75 4.58
1744 1755 4.657039 TCGGGTATCTAGGCTTGGTTTATT 59.343 41.667 0.00 0.00 0.00 1.40
1812 1823 7.136822 TCATATGTTTACTGTGGGCTTAGAT 57.863 36.000 1.90 0.00 0.00 1.98
1920 1931 3.971305 TGTGGGGAGGTTCGATACAATAT 59.029 43.478 0.00 0.00 0.00 1.28
1949 1960 5.014202 ACCCATGTTATTTGTTGTAGGGTC 58.986 41.667 0.00 0.00 43.17 4.46
2072 2083 7.931015 TCCATTATGTACTTTCTATGGGAGT 57.069 36.000 12.93 0.00 34.64 3.85
2209 2220 2.833943 ACCTTCTTTCCCATGCATTTCC 59.166 45.455 0.00 0.00 0.00 3.13
2260 2271 7.279758 GCATTCTAGATTATCCAGATGCTTACC 59.720 40.741 12.43 0.00 0.00 2.85
2429 2440 7.931578 CCACACTAGAATGGTTGGTATAAAA 57.068 36.000 0.00 0.00 0.00 1.52
2430 2441 7.985476 CCACACTAGAATGGTTGGTATAAAAG 58.015 38.462 0.00 0.00 0.00 2.27
2431 2442 7.827236 CCACACTAGAATGGTTGGTATAAAAGA 59.173 37.037 0.00 0.00 0.00 2.52
2432 2443 9.396022 CACACTAGAATGGTTGGTATAAAAGAT 57.604 33.333 0.00 0.00 0.00 2.40
2476 2487 3.400255 AGAACTTCCTGCGGTAAAAGAC 58.600 45.455 6.57 2.05 0.00 3.01
2735 2748 4.344104 CCTTTAGGAATCCAAAAGAGCCA 58.656 43.478 0.61 0.00 37.39 4.75
2908 2921 1.669115 GAGCGTGTGTGCCAGTGAT 60.669 57.895 0.00 0.00 34.65 3.06
2924 2937 4.690748 CCAGTGATAAAAGAAGTGCGAGAA 59.309 41.667 0.00 0.00 0.00 2.87
3011 3024 3.045142 CAAGGCAACAGGGTGCTG 58.955 61.111 9.44 0.00 44.31 4.41
3186 3199 8.172352 TCTAAAATGGAAATCGAAAAGGAACA 57.828 30.769 0.00 0.00 0.00 3.18
3227 3240 3.124921 CCGCCGGAACTCGCAATT 61.125 61.111 5.05 0.00 37.59 2.32
3236 3249 4.569162 CCGGAACTCGCAATTAAACATAGA 59.431 41.667 0.00 0.00 37.59 1.98
3259 3272 1.075374 TGGCAAACTAGGAAGGCACAT 59.925 47.619 0.00 0.00 0.00 3.21
3281 3294 0.179018 AAGAAGGCAGTTGCGAAGGT 60.179 50.000 0.00 0.00 43.26 3.50
3299 3312 5.617751 CGAAGGTGAGCAAGGTATTTTTGAG 60.618 44.000 0.00 0.00 0.00 3.02
3320 3333 7.161773 TGAGTTTCCTCAAATTGATTCATCC 57.838 36.000 0.00 0.00 44.67 3.51
3528 3541 2.671396 CCCGAACTACGAATGGAAACAG 59.329 50.000 0.00 0.00 45.07 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
111 114 2.100916 CCTACTACTACGTGCAGGCAAT 59.899 50.000 6.26 0.00 0.00 3.56
113 116 1.100510 CCTACTACTACGTGCAGGCA 58.899 55.000 6.26 0.00 0.00 4.75
140 143 3.246936 TCGACGATGATTCCTACTACACG 59.753 47.826 0.00 0.00 0.00 4.49
152 155 1.138883 CACCACCGTCGACGATGAT 59.861 57.895 37.65 18.57 43.02 2.45
169 172 3.005539 GAGCCCTGGAGCCAGACA 61.006 66.667 17.88 0.00 46.30 3.41
221 224 0.706583 TTTCTCCCCCTTTTCCCCCA 60.707 55.000 0.00 0.00 0.00 4.96
348 354 2.922564 AGCTATCCCCCTCTTATTCCC 58.077 52.381 0.00 0.00 0.00 3.97
349 355 4.690149 ACTAGCTATCCCCCTCTTATTCC 58.310 47.826 0.00 0.00 0.00 3.01
433 439 1.804372 GCGATGCTACTTGGAGGACTG 60.804 57.143 0.00 0.00 0.00 3.51
497 503 5.485353 AGAGATAACCCAGTGATCACTTTCA 59.515 40.000 25.84 9.84 40.20 2.69
503 509 3.994317 TCCAGAGATAACCCAGTGATCA 58.006 45.455 0.00 0.00 0.00 2.92
546 552 9.307121 CTTATGACAACTAGAACCAGATACTTG 57.693 37.037 0.00 0.00 0.00 3.16
582 588 0.471191 AAAAGGACGACCCGGAGTTT 59.529 50.000 0.73 0.00 40.87 2.66
716 724 0.107945 GGGCTGCGACTTGATCTTCT 60.108 55.000 0.00 0.00 0.00 2.85
743 754 0.032678 CGCTGACCTCTCTGTTGTGT 59.967 55.000 0.00 0.00 0.00 3.72
762 773 1.429463 CATAGGATTTAGACCGGCGC 58.571 55.000 0.00 0.00 0.00 6.53
853 864 2.846827 AGCCTGCTCTTGTATTAAGGGT 59.153 45.455 0.00 0.00 0.00 4.34
928 939 8.581253 TTGTGATTAGTAGAGAAGAGACATCA 57.419 34.615 0.00 0.00 0.00 3.07
948 959 4.624913 AGAGAGTCCCAATATCCTTGTGA 58.375 43.478 0.00 0.00 0.00 3.58
1028 1039 1.337823 CGGGTCGGGCTAATTCCATAG 60.338 57.143 0.00 0.00 0.00 2.23
1049 1060 3.433306 TCCCACCAAGAATTTGATCGT 57.567 42.857 0.00 0.00 36.36 3.73
1137 1148 3.387962 ACCACATCCACCTATCATCACT 58.612 45.455 0.00 0.00 0.00 3.41
1139 1150 6.298361 CAATTACCACATCCACCTATCATCA 58.702 40.000 0.00 0.00 0.00 3.07
1154 1165 6.863126 CAGAATCAGAACAAACCAATTACCAC 59.137 38.462 0.00 0.00 0.00 4.16
1172 1183 3.106827 TCAGGTGCACCTATCAGAATCA 58.893 45.455 37.27 7.01 46.65 2.57
1444 1455 8.200024 AGTGGTAATCTATGCATAGTCATTCT 57.800 34.615 28.51 17.32 0.00 2.40
1483 1494 6.552445 AAGTAGGAATGCTGTCACTAGAAT 57.448 37.500 0.00 0.00 0.00 2.40
1530 1541 5.980715 GGTTAATAACATTGTAATTGCCCCG 59.019 40.000 5.45 0.00 0.00 5.73
1645 1656 6.294473 CAGGTAGAATGAGAATATGCACCTT 58.706 40.000 0.00 0.00 31.61 3.50
1675 1686 8.674607 TGTCGATGCGATATGACTAATAATACT 58.325 33.333 0.00 0.00 38.42 2.12
1694 1705 4.616802 CCGGTTTTCTTGAAAATGTCGATG 59.383 41.667 19.61 8.96 0.00 3.84
1701 1712 4.855531 CGAAGACCGGTTTTCTTGAAAAT 58.144 39.130 29.04 0.00 33.30 1.82
1744 1755 8.933653 TCCAAGAACACATATACTTATCATGGA 58.066 33.333 0.00 0.00 0.00 3.41
1759 1770 5.534654 CCCAAACTAGAAATCCAAGAACACA 59.465 40.000 0.00 0.00 0.00 3.72
1812 1823 3.006003 TGAAGTAGGCACGTGTATCAACA 59.994 43.478 18.38 7.26 0.00 3.33
1920 1931 8.361139 CCTACAACAAATAACATGGGTGTTTTA 58.639 33.333 0.00 0.00 46.07 1.52
1959 1970 1.559682 GTGAGCCCTCCTATGGTGAAA 59.440 52.381 0.00 0.00 0.00 2.69
2072 2083 4.938080 TCCAGCAAATAAAGCAAAAACGA 58.062 34.783 0.00 0.00 0.00 3.85
2175 2186 4.263771 GGAAAGAAGGTCAGATTAACCCCA 60.264 45.833 0.00 0.00 37.52 4.96
2209 2220 0.250338 GGCATACCCGAAAGCCCTAG 60.250 60.000 0.00 0.00 41.25 3.02
2260 2271 0.250209 CTCAGAGCATTCCATCCGGG 60.250 60.000 0.00 0.00 38.37 5.73
2287 2298 8.896722 ATCCCAACTACGGATATATAAGAACT 57.103 34.615 0.00 0.00 38.39 3.01
2425 2436 3.992943 TGAAAGGCCGGAGATCTTTTA 57.007 42.857 5.05 3.08 32.03 1.52
2429 2440 2.683768 AGTATGAAAGGCCGGAGATCT 58.316 47.619 5.05 0.00 0.00 2.75
2430 2441 3.477210 AAGTATGAAAGGCCGGAGATC 57.523 47.619 5.05 0.00 0.00 2.75
2431 2442 3.933861 AAAGTATGAAAGGCCGGAGAT 57.066 42.857 5.05 0.00 0.00 2.75
2432 2443 3.343617 CAAAAGTATGAAAGGCCGGAGA 58.656 45.455 5.05 0.00 0.00 3.71
2495 2507 7.455008 TGAAACTTCCTTCATAGTTAGGAGAGT 59.545 37.037 0.00 0.00 41.38 3.24
2731 2744 3.070734 GTCAGTGATCCACAGATATGGCT 59.929 47.826 0.00 0.00 39.85 4.75
2735 2748 2.036475 GCCGTCAGTGATCCACAGATAT 59.964 50.000 0.00 0.00 36.74 1.63
2859 2872 7.365652 GGGTCTATCACTGAGAAATCCCTTTTA 60.366 40.741 0.00 0.00 0.00 1.52
2908 2921 5.171476 CCAGATCTTCTCGCACTTCTTTTA 58.829 41.667 0.00 0.00 0.00 1.52
2924 2937 2.406559 CATCCCTCACTTCCCAGATCT 58.593 52.381 0.00 0.00 0.00 2.75
3011 3024 3.754850 ACGGACAATACTTGCTTAAACCC 59.245 43.478 0.00 0.00 0.00 4.11
3186 3199 0.178941 AGTACCTGGACGGACAAGGT 60.179 55.000 11.27 11.27 36.31 3.50
3227 3240 7.011499 TCCTAGTTTGCCAACTCTATGTTTA 57.989 36.000 6.43 0.00 42.66 2.01
3236 3249 1.144913 TGCCTTCCTAGTTTGCCAACT 59.855 47.619 8.41 8.41 45.73 3.16
3259 3272 2.552315 CCTTCGCAACTGCCTTCTTTTA 59.448 45.455 0.00 0.00 37.91 1.52
3281 3294 5.833131 AGGAAACTCAAAAATACCTTGCTCA 59.167 36.000 0.00 0.00 32.90 4.26
3299 3312 7.549839 TCATGGATGAATCAATTTGAGGAAAC 58.450 34.615 5.21 0.00 33.08 2.78
3438 3451 7.051000 GTCTTCCTCCTCAACAGCTATATTTT 58.949 38.462 0.00 0.00 0.00 1.82
3442 3455 3.961408 GGTCTTCCTCCTCAACAGCTATA 59.039 47.826 0.00 0.00 0.00 1.31
3528 3541 3.377439 CGTTTACCCCTGCTTGAAAAAC 58.623 45.455 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.