Multiple sequence alignment - TraesCS4B01G269100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G269100 chr4B 100.000 3404 0 0 1 3404 544036043 544039446 0.000000e+00 6287.0
1 TraesCS4B01G269100 chr4D 86.935 2610 188 84 249 2778 439690470 439693006 0.000000e+00 2789.0
2 TraesCS4B01G269100 chr4D 91.026 312 22 3 3095 3404 439693117 439693424 1.890000e-112 416.0
3 TraesCS4B01G269100 chr4D 92.373 236 11 2 1 230 439690035 439690269 2.530000e-86 329.0
4 TraesCS4B01G269100 chr4A 92.298 831 47 8 1970 2787 29022516 29023342 0.000000e+00 1164.0
5 TraesCS4B01G269100 chr4A 87.360 712 33 26 745 1441 29021304 29021973 0.000000e+00 763.0
6 TraesCS4B01G269100 chr4A 86.069 524 52 7 243 760 29020669 29021177 8.310000e-151 544.0
7 TraesCS4B01G269100 chr4A 94.539 293 15 1 3113 3404 29023467 29023759 5.180000e-123 451.0
8 TraesCS4B01G269100 chr4A 94.340 212 9 2 1451 1659 29022026 29022237 4.240000e-84 322.0
9 TraesCS4B01G269100 chr4A 87.712 236 16 4 1 230 29020236 29020464 2.600000e-66 263.0
10 TraesCS4B01G269100 chr4A 86.932 176 14 5 1790 1958 29022301 29022474 4.480000e-44 189.0
11 TraesCS4B01G269100 chr4A 91.781 73 5 1 73 145 67581794 67581723 2.160000e-17 100.0
12 TraesCS4B01G269100 chr5B 98.276 232 4 0 2789 3020 593062687 593062918 1.140000e-109 407.0
13 TraesCS4B01G269100 chr5B 98.261 230 4 0 2791 3020 136051573 136051802 1.470000e-108 403.0
14 TraesCS4B01G269100 chr5B 97.046 237 7 0 2784 3020 306402365 306402129 1.900000e-107 399.0
15 TraesCS4B01G269100 chr6B 98.261 230 4 0 2791 3020 128742328 128742557 1.470000e-108 403.0
16 TraesCS4B01G269100 chr6B 98.261 230 4 0 2791 3020 293106268 293106039 1.470000e-108 403.0
17 TraesCS4B01G269100 chr3B 98.261 230 4 0 2791 3020 476292235 476292006 1.470000e-108 403.0
18 TraesCS4B01G269100 chr3B 96.552 58 2 0 88 145 173902501 173902444 2.800000e-16 97.1
19 TraesCS4B01G269100 chr1B 98.261 230 4 0 2791 3020 537649275 537649046 1.470000e-108 403.0
20 TraesCS4B01G269100 chr1B 96.875 64 2 0 14 77 53319579 53319642 1.290000e-19 108.0
21 TraesCS4B01G269100 chr1B 94.828 58 3 0 88 145 672522132 672522075 1.300000e-14 91.6
22 TraesCS4B01G269100 chr1A 96.667 240 6 2 2781 3020 10076860 10077097 6.840000e-107 398.0
23 TraesCS4B01G269100 chr3A 96.653 239 7 1 2782 3020 150511371 150511608 2.460000e-106 396.0
24 TraesCS4B01G269100 chrUn 95.312 64 3 0 14 77 216515535 216515598 6.010000e-18 102.0
25 TraesCS4B01G269100 chrUn 95.312 64 3 0 14 77 286267848 286267785 6.010000e-18 102.0
26 TraesCS4B01G269100 chrUn 95.312 64 3 0 14 77 412653775 412653838 6.010000e-18 102.0
27 TraesCS4B01G269100 chr1D 95.312 64 3 0 14 77 254395044 254395107 6.010000e-18 102.0
28 TraesCS4B01G269100 chr1D 95.312 64 3 0 14 77 413924431 413924494 6.010000e-18 102.0
29 TraesCS4B01G269100 chr6D 90.789 76 5 1 2 77 135461367 135461440 2.160000e-17 100.0
30 TraesCS4B01G269100 chr5D 87.805 82 9 1 64 145 79909560 79909640 1.010000e-15 95.3
31 TraesCS4B01G269100 chr5A 89.474 76 7 1 70 145 246848334 246848408 1.010000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G269100 chr4B 544036043 544039446 3403 False 6287 6287 100.000000 1 3404 1 chr4B.!!$F1 3403
1 TraesCS4B01G269100 chr4D 439690035 439693424 3389 False 1178 2789 90.111333 1 3404 3 chr4D.!!$F1 3403
2 TraesCS4B01G269100 chr4A 29020236 29023759 3523 False 528 1164 89.892857 1 3404 7 chr4A.!!$F1 3403

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
277 477 0.178873 AACCCAGTAGCCCAGAAGGA 60.179 55.0 0.0 0.0 38.24 3.36 F
621 821 0.179094 GTTGTGTGACGGAGGTGACA 60.179 55.0 0.0 0.0 37.97 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1768 2229 0.306228 CGATCGGTTTGTTGCACACA 59.694 50.0 7.38 0.0 0.00 3.72 R
2573 3101 0.336048 ACTACCATTGGGGCAATGCT 59.664 50.0 4.82 0.0 46.73 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 5.319453 AGAACCATGAAAAGCAAGATCTCA 58.681 37.500 0.00 0.00 0.00 3.27
59 60 8.510505 AGCAAGATCTCAAATAAGAAAACAGAC 58.489 33.333 0.00 0.00 0.00 3.51
63 64 6.539649 TCTCAAATAAGAAAACAGACACCG 57.460 37.500 0.00 0.00 0.00 4.94
78 79 0.601558 CACCGAGGAAGAGGAAACGA 59.398 55.000 0.00 0.00 0.00 3.85
187 194 1.510776 CTCCGCCTACTACTCCTACG 58.489 60.000 0.00 0.00 0.00 3.51
220 227 4.563184 CACTCGTCAAACCATAGCTCTAAC 59.437 45.833 0.00 0.00 0.00 2.34
222 229 4.995124 TCGTCAAACCATAGCTCTAACTC 58.005 43.478 0.00 0.00 0.00 3.01
230 237 5.971763 ACCATAGCTCTAACTCAGTCAAAG 58.028 41.667 0.00 0.00 0.00 2.77
233 240 6.350528 CCATAGCTCTAACTCAGTCAAAGTCA 60.351 42.308 0.00 0.00 0.00 3.41
235 242 5.918608 AGCTCTAACTCAGTCAAAGTCAAA 58.081 37.500 0.00 0.00 0.00 2.69
236 243 5.755861 AGCTCTAACTCAGTCAAAGTCAAAC 59.244 40.000 0.00 0.00 0.00 2.93
237 244 5.755861 GCTCTAACTCAGTCAAAGTCAAACT 59.244 40.000 0.00 0.00 0.00 2.66
239 246 6.281405 TCTAACTCAGTCAAAGTCAAACTCC 58.719 40.000 0.00 0.00 0.00 3.85
246 446 6.152661 TCAGTCAAAGTCAAACTCCACAATTT 59.847 34.615 0.00 0.00 0.00 1.82
247 447 6.473455 CAGTCAAAGTCAAACTCCACAATTTC 59.527 38.462 0.00 0.00 0.00 2.17
271 471 2.916934 AGAACATAAACCCAGTAGCCCA 59.083 45.455 0.00 0.00 0.00 5.36
277 477 0.178873 AACCCAGTAGCCCAGAAGGA 60.179 55.000 0.00 0.00 38.24 3.36
279 479 0.543749 CCCAGTAGCCCAGAAGGAAG 59.456 60.000 0.00 0.00 38.24 3.46
281 481 1.280457 CAGTAGCCCAGAAGGAAGGT 58.720 55.000 0.00 0.00 38.24 3.50
283 483 2.838202 CAGTAGCCCAGAAGGAAGGTTA 59.162 50.000 0.00 0.00 38.24 2.85
285 485 3.456277 AGTAGCCCAGAAGGAAGGTTATG 59.544 47.826 0.00 0.00 38.24 1.90
286 486 2.279173 AGCCCAGAAGGAAGGTTATGT 58.721 47.619 0.00 0.00 38.24 2.29
289 489 3.561313 GCCCAGAAGGAAGGTTATGTTCA 60.561 47.826 0.00 0.00 38.24 3.18
333 533 1.079503 CAGCCGTACAAGAAAGAGGC 58.920 55.000 0.00 0.00 44.45 4.70
335 535 1.079503 GCCGTACAAGAAAGAGGCTG 58.920 55.000 0.00 0.00 41.21 4.85
345 545 2.634940 AGAAAGAGGCTGCTAGTTGACA 59.365 45.455 0.00 0.00 0.00 3.58
350 550 1.352352 AGGCTGCTAGTTGACAATGGT 59.648 47.619 0.00 0.00 0.00 3.55
357 557 3.361158 TTGACAATGGTGGCGGCG 61.361 61.111 0.51 0.51 34.30 6.46
377 577 2.954318 CGATCCCTTGATGAAGCCATTT 59.046 45.455 0.00 0.00 32.09 2.32
398 598 0.388649 CTTAGTTGCTCGCGGTGTCT 60.389 55.000 6.13 1.58 0.00 3.41
423 623 3.195396 CGTTTGGAATGGGGATGTTGAAT 59.805 43.478 0.00 0.00 0.00 2.57
427 627 2.109774 GAATGGGGATGTTGAATGCCA 58.890 47.619 0.00 0.00 0.00 4.92
441 641 1.122227 ATGCCATGTTTGGTATGGGC 58.878 50.000 6.19 0.00 45.52 5.36
457 657 1.446966 GGCTGCTTCTCAGGACGTC 60.447 63.158 7.13 7.13 43.06 4.34
482 682 2.928361 GGGACGCGATATGCAACG 59.072 61.111 15.93 0.00 46.97 4.10
488 688 1.468340 CGCGATATGCAACGTCGTCA 61.468 55.000 0.00 0.00 46.97 4.35
514 714 2.921221 TCCTCCATGACTTCTTCCCTT 58.079 47.619 0.00 0.00 0.00 3.95
555 755 1.674057 CCACTTGCCGACTCCTCTT 59.326 57.895 0.00 0.00 0.00 2.85
557 757 0.671781 CACTTGCCGACTCCTCTTGG 60.672 60.000 0.00 0.00 0.00 3.61
564 764 1.630148 CGACTCCTCTTGGCGTTAAG 58.370 55.000 0.00 0.00 30.34 1.85
565 765 1.736032 CGACTCCTCTTGGCGTTAAGG 60.736 57.143 1.86 0.00 30.34 2.69
566 766 1.275573 GACTCCTCTTGGCGTTAAGGT 59.724 52.381 0.00 0.00 30.34 3.50
572 772 0.517316 CTTGGCGTTAAGGTGAGTGC 59.483 55.000 0.00 0.00 0.00 4.40
576 776 0.234884 GCGTTAAGGTGAGTGCACAC 59.765 55.000 21.04 14.15 46.96 3.82
621 821 0.179094 GTTGTGTGACGGAGGTGACA 60.179 55.000 0.00 0.00 37.97 3.58
623 823 3.942601 TGTGACGGAGGTGACACA 58.057 55.556 8.08 0.00 35.27 3.72
651 851 1.001048 CGTGACACGGTCTAGGTGAAA 60.001 52.381 20.26 0.00 38.08 2.69
720 931 0.677842 ACGACGAGCTTACCAACCTT 59.322 50.000 0.00 0.00 0.00 3.50
732 943 1.141053 ACCAACCTTCAGCTCTTCGTT 59.859 47.619 0.00 0.00 0.00 3.85
762 1115 1.324383 TAGCTTCACAGGACGTGTCA 58.676 50.000 0.00 0.00 46.44 3.58
803 1156 0.194080 TATACCCCGGCCCCACTAAT 59.806 55.000 0.00 0.00 0.00 1.73
804 1157 0.194080 ATACCCCGGCCCCACTAATA 59.806 55.000 0.00 0.00 0.00 0.98
805 1158 0.194080 TACCCCGGCCCCACTAATAT 59.806 55.000 0.00 0.00 0.00 1.28
806 1159 0.194080 ACCCCGGCCCCACTAATATA 59.806 55.000 0.00 0.00 0.00 0.86
807 1160 1.364269 CCCCGGCCCCACTAATATAA 58.636 55.000 0.00 0.00 0.00 0.98
941 1323 4.183686 GCCGCTACGTCTACGCCA 62.184 66.667 1.74 0.00 44.43 5.69
1003 1385 1.074926 GCTCCTCCTCCTCCCATGA 60.075 63.158 0.00 0.00 0.00 3.07
1301 1698 1.815421 CGGTGAAGAATCAGGGCCG 60.815 63.158 0.00 0.00 36.69 6.13
1371 1782 6.127310 ACAGCAAGGTTCCTACTCAACTATAG 60.127 42.308 0.00 0.00 0.00 1.31
1373 1784 7.068348 CAGCAAGGTTCCTACTCAACTATAGTA 59.932 40.741 5.65 0.00 0.00 1.82
1375 1786 7.068470 GCAAGGTTCCTACTCAACTATAGTACT 59.932 40.741 5.65 0.00 0.00 2.73
1376 1787 9.624373 CAAGGTTCCTACTCAACTATAGTACTA 57.376 37.037 5.65 4.77 0.00 1.82
1377 1788 9.850198 AAGGTTCCTACTCAACTATAGTACTAG 57.150 37.037 5.65 6.66 0.00 2.57
1378 1789 9.002061 AGGTTCCTACTCAACTATAGTACTAGT 57.998 37.037 5.65 11.88 33.34 2.57
1441 1856 2.226437 TCGCATGCTCTTGGTTTCTTTC 59.774 45.455 17.13 0.00 0.00 2.62
1443 1858 3.304928 CGCATGCTCTTGGTTTCTTTCTT 60.305 43.478 17.13 0.00 0.00 2.52
1445 1860 4.683320 GCATGCTCTTGGTTTCTTTCTTTC 59.317 41.667 11.37 0.00 0.00 2.62
1446 1861 5.508657 GCATGCTCTTGGTTTCTTTCTTTCT 60.509 40.000 11.37 0.00 0.00 2.52
1447 1862 6.510536 CATGCTCTTGGTTTCTTTCTTTCTT 58.489 36.000 0.00 0.00 0.00 2.52
1448 1863 5.894807 TGCTCTTGGTTTCTTTCTTTCTTG 58.105 37.500 0.00 0.00 0.00 3.02
1449 1864 4.742167 GCTCTTGGTTTCTTTCTTTCTTGC 59.258 41.667 0.00 0.00 0.00 4.01
1455 1913 6.068010 TGGTTTCTTTCTTTCTTGCCTATGA 58.932 36.000 0.00 0.00 0.00 2.15
1540 2001 4.394300 CAGTACAAGAAGCCCAAGAAGATG 59.606 45.833 0.00 0.00 0.00 2.90
1641 2102 0.791983 GACGACGCGAGATTCGACAA 60.792 55.000 21.45 0.00 43.74 3.18
1696 2157 1.145803 CGGAGTCCGTCTTTGTTTCC 58.854 55.000 23.83 0.00 42.73 3.13
1715 2176 2.907458 CCCCCTTTTGAACAGATCCT 57.093 50.000 0.00 0.00 0.00 3.24
1716 2177 2.728007 CCCCCTTTTGAACAGATCCTC 58.272 52.381 0.00 0.00 0.00 3.71
1717 2178 2.041620 CCCCCTTTTGAACAGATCCTCA 59.958 50.000 0.00 0.00 0.00 3.86
1718 2179 3.309410 CCCCCTTTTGAACAGATCCTCAT 60.309 47.826 0.00 0.00 0.00 2.90
1719 2180 3.698040 CCCCTTTTGAACAGATCCTCATG 59.302 47.826 0.00 0.00 0.00 3.07
1721 2182 5.500234 CCCTTTTGAACAGATCCTCATGTA 58.500 41.667 0.00 0.00 0.00 2.29
1722 2183 6.125029 CCCTTTTGAACAGATCCTCATGTAT 58.875 40.000 0.00 0.00 0.00 2.29
1723 2184 6.039047 CCCTTTTGAACAGATCCTCATGTATG 59.961 42.308 0.00 0.00 0.00 2.39
1725 2186 5.698741 TTGAACAGATCCTCATGTATGGT 57.301 39.130 0.00 0.00 0.00 3.55
1726 2187 5.027293 TGAACAGATCCTCATGTATGGTG 57.973 43.478 0.00 0.00 0.00 4.17
1727 2188 4.716287 TGAACAGATCCTCATGTATGGTGA 59.284 41.667 0.00 0.00 0.00 4.02
1728 2189 5.367644 TGAACAGATCCTCATGTATGGTGAT 59.632 40.000 0.00 0.00 0.00 3.06
1729 2190 5.224821 ACAGATCCTCATGTATGGTGATG 57.775 43.478 0.00 0.00 0.00 3.07
1730 2191 4.001652 CAGATCCTCATGTATGGTGATGC 58.998 47.826 0.00 0.00 0.00 3.91
1731 2192 3.649502 AGATCCTCATGTATGGTGATGCA 59.350 43.478 0.00 0.00 0.00 3.96
1732 2193 3.929955 TCCTCATGTATGGTGATGCAA 57.070 42.857 0.00 0.00 0.00 4.08
1734 2195 2.292569 CCTCATGTATGGTGATGCAAGC 59.707 50.000 0.00 0.00 0.00 4.01
1735 2196 2.946990 CTCATGTATGGTGATGCAAGCA 59.053 45.455 0.00 0.00 0.00 3.91
1736 2197 3.558033 TCATGTATGGTGATGCAAGCAT 58.442 40.909 7.35 7.35 41.07 3.79
1737 2198 3.316868 TCATGTATGGTGATGCAAGCATG 59.683 43.478 12.94 8.06 38.65 4.06
1738 2199 3.002038 TGTATGGTGATGCAAGCATGA 57.998 42.857 12.94 0.19 38.65 3.07
1739 2200 3.354467 TGTATGGTGATGCAAGCATGAA 58.646 40.909 12.94 0.00 38.65 2.57
1740 2201 3.379057 TGTATGGTGATGCAAGCATGAAG 59.621 43.478 12.94 0.00 38.65 3.02
1741 2202 1.913778 TGGTGATGCAAGCATGAAGT 58.086 45.000 12.94 0.00 30.84 3.01
1742 2203 3.070476 TGGTGATGCAAGCATGAAGTA 57.930 42.857 12.94 0.00 30.84 2.24
1743 2204 2.749076 TGGTGATGCAAGCATGAAGTAC 59.251 45.455 12.94 3.85 30.84 2.73
1744 2205 2.749076 GGTGATGCAAGCATGAAGTACA 59.251 45.455 12.94 0.00 30.84 2.90
1745 2206 3.181503 GGTGATGCAAGCATGAAGTACAG 60.182 47.826 12.94 0.00 30.84 2.74
1746 2207 3.438087 GTGATGCAAGCATGAAGTACAGT 59.562 43.478 12.94 0.00 30.84 3.55
1747 2208 4.631377 GTGATGCAAGCATGAAGTACAGTA 59.369 41.667 12.94 0.00 30.84 2.74
1748 2209 5.295292 GTGATGCAAGCATGAAGTACAGTAT 59.705 40.000 12.94 0.00 30.84 2.12
1753 2214 5.237127 GCAAGCATGAAGTACAGTATATGCA 59.763 40.000 17.00 0.00 42.34 3.96
1773 2234 7.872163 ATGCAACTAACAATTTACATGTGTG 57.128 32.000 9.11 3.95 0.00 3.82
1774 2235 5.689514 TGCAACTAACAATTTACATGTGTGC 59.310 36.000 9.11 2.37 0.00 4.57
1775 2236 5.689514 GCAACTAACAATTTACATGTGTGCA 59.310 36.000 9.11 0.00 31.19 4.57
1776 2237 6.199908 GCAACTAACAATTTACATGTGTGCAA 59.800 34.615 9.11 0.00 31.19 4.08
1777 2238 7.554732 CAACTAACAATTTACATGTGTGCAAC 58.445 34.615 9.11 0.00 37.35 4.17
1806 2267 1.018910 GGTGTTTGTACGTGCAGGTT 58.981 50.000 18.35 2.11 0.00 3.50
1843 2304 1.338200 GGTACAGTGCTCCTCAACCTG 60.338 57.143 0.00 0.00 0.00 4.00
1845 2306 2.031516 CAGTGCTCCTCAACCTGCG 61.032 63.158 0.00 0.00 0.00 5.18
1893 2354 0.030235 AGCGCTGCGACGATGTTATA 59.970 50.000 28.07 0.00 34.06 0.98
1931 2402 5.759059 AGCCATGGTTGATCTTGATTTCTA 58.241 37.500 14.67 0.00 0.00 2.10
1934 2405 6.678900 GCCATGGTTGATCTTGATTTCTACAC 60.679 42.308 14.67 0.00 0.00 2.90
1935 2406 6.457392 CCATGGTTGATCTTGATTTCTACACG 60.457 42.308 2.57 0.00 0.00 4.49
1950 2421 5.227238 TCTACACGTTAGGTTTCGATCTC 57.773 43.478 0.00 0.00 0.00 2.75
1951 2422 4.940046 TCTACACGTTAGGTTTCGATCTCT 59.060 41.667 0.00 0.00 0.00 3.10
1955 2426 3.242673 ACGTTAGGTTTCGATCTCTAGCG 60.243 47.826 17.18 17.18 40.48 4.26
1956 2427 3.044286 GTTAGGTTTCGATCTCTAGCGC 58.956 50.000 0.00 0.00 33.63 5.92
1957 2428 1.394618 AGGTTTCGATCTCTAGCGCT 58.605 50.000 17.26 17.26 33.63 5.92
1959 2430 2.121009 GGTTTCGATCTCTAGCGCTTC 58.879 52.381 18.68 5.41 33.63 3.86
1960 2431 1.776333 GTTTCGATCTCTAGCGCTTCG 59.224 52.381 18.68 19.26 33.63 3.79
1983 2482 3.420893 CTGAAGCCCTGAACCATTGTTA 58.579 45.455 0.00 0.00 33.97 2.41
2047 2546 2.666098 GGAGAGGGGCTACGGCAAA 61.666 63.158 0.00 0.00 40.87 3.68
2076 2575 3.181967 CGACCCTTCGCTGCTTCG 61.182 66.667 0.00 0.00 38.71 3.79
2144 2649 3.781307 CGTCCCCGCCATTCCTCA 61.781 66.667 0.00 0.00 0.00 3.86
2175 2683 1.938471 GCCGAGCACGATGATGATGAT 60.938 52.381 4.70 0.00 42.66 2.45
2199 2707 2.618709 GCTCAGCAAACACAGGTAAACT 59.381 45.455 0.00 0.00 0.00 2.66
2227 2735 3.319137 TTCTGGTCATTCTCCAAGACG 57.681 47.619 0.00 0.00 34.35 4.18
2228 2736 2.525368 TCTGGTCATTCTCCAAGACGA 58.475 47.619 0.00 0.00 34.35 4.20
2229 2737 2.231478 TCTGGTCATTCTCCAAGACGAC 59.769 50.000 0.00 0.00 34.35 4.34
2233 2741 2.231478 GTCATTCTCCAAGACGACTCCA 59.769 50.000 0.00 0.00 29.05 3.86
2330 2842 2.587322 CTACGATTTGCAGGGGCCGA 62.587 60.000 0.00 0.00 40.13 5.54
2331 2843 1.978455 TACGATTTGCAGGGGCCGAT 61.978 55.000 0.00 0.00 40.13 4.18
2332 2844 2.120909 CGATTTGCAGGGGCCGATT 61.121 57.895 0.00 0.00 40.13 3.34
2333 2845 1.735973 GATTTGCAGGGGCCGATTC 59.264 57.895 0.00 0.00 40.13 2.52
2334 2846 1.738346 GATTTGCAGGGGCCGATTCC 61.738 60.000 0.00 0.00 40.13 3.01
2376 2900 1.451504 CACCCAGTTGCAGGACTCA 59.548 57.895 0.00 0.00 0.00 3.41
2418 2942 6.700081 TGTACAGATAGCCGTTATTCATTGAC 59.300 38.462 0.00 0.00 0.00 3.18
2450 2974 7.679659 TTCTTCATTCGTTGTATAGATGTCG 57.320 36.000 0.00 0.00 0.00 4.35
2455 2979 7.645402 TCATTCGTTGTATAGATGTCGTACAT 58.355 34.615 0.00 0.91 42.43 2.29
2541 3069 9.776158 TTTATGTTGCGTCATATAAACGAAAAT 57.224 25.926 13.42 8.74 39.27 1.82
2580 3108 4.805719 GGAATTTGTAAGCCTAAGCATTGC 59.194 41.667 0.00 0.00 43.56 3.56
2692 3220 0.392193 CTCAAGATCTTGCCTGCGGT 60.392 55.000 27.45 0.00 40.24 5.68
2720 3248 1.880894 CACGCTCTCCACGAAGGTA 59.119 57.895 0.00 0.00 39.02 3.08
2731 3259 1.294138 CGAAGGTAACCCGCCTCAA 59.706 57.895 0.00 0.00 34.81 3.02
2732 3260 1.017701 CGAAGGTAACCCGCCTCAAC 61.018 60.000 0.00 0.00 34.81 3.18
2743 3271 2.289819 CCCGCCTCAACCTTTTGTAGTA 60.290 50.000 0.00 0.00 34.02 1.82
2771 3299 4.935885 CTGAAATGCAGGTCAGAGTTAC 57.064 45.455 19.85 0.00 43.32 2.50
2773 3301 4.713553 TGAAATGCAGGTCAGAGTTACAA 58.286 39.130 0.00 0.00 0.00 2.41
2778 3306 2.224305 GCAGGTCAGAGTTACAACTGGT 60.224 50.000 0.00 0.00 39.88 4.00
2779 3307 3.006537 GCAGGTCAGAGTTACAACTGGTA 59.993 47.826 0.00 0.00 39.88 3.25
2787 3315 8.467598 GTCAGAGTTACAACTGGTATAGAATGA 58.532 37.037 0.00 0.00 39.88 2.57
2788 3316 8.687242 TCAGAGTTACAACTGGTATAGAATGAG 58.313 37.037 0.00 0.00 39.88 2.90
2789 3317 7.436673 CAGAGTTACAACTGGTATAGAATGAGC 59.563 40.741 0.00 0.00 39.88 4.26
2790 3318 6.583562 AGTTACAACTGGTATAGAATGAGCC 58.416 40.000 0.00 0.00 37.98 4.70
2791 3319 6.156256 AGTTACAACTGGTATAGAATGAGCCA 59.844 38.462 0.00 0.00 37.98 4.75
2792 3320 5.435686 ACAACTGGTATAGAATGAGCCAA 57.564 39.130 0.00 0.00 0.00 4.52
2793 3321 5.186198 ACAACTGGTATAGAATGAGCCAAC 58.814 41.667 0.00 0.00 0.00 3.77
2794 3322 5.185454 CAACTGGTATAGAATGAGCCAACA 58.815 41.667 0.00 0.00 0.00 3.33
2796 3324 5.186198 ACTGGTATAGAATGAGCCAACAAC 58.814 41.667 0.00 0.00 0.00 3.32
2798 3326 5.185454 TGGTATAGAATGAGCCAACAACAG 58.815 41.667 0.00 0.00 0.00 3.16
2799 3327 4.035675 GGTATAGAATGAGCCAACAACAGC 59.964 45.833 0.00 0.00 0.00 4.40
2800 3328 1.985473 AGAATGAGCCAACAACAGCA 58.015 45.000 0.00 0.00 0.00 4.41
2801 3329 1.884579 AGAATGAGCCAACAACAGCAG 59.115 47.619 0.00 0.00 0.00 4.24
2802 3330 0.316204 AATGAGCCAACAACAGCAGC 59.684 50.000 0.00 0.00 0.00 5.25
2803 3331 0.824595 ATGAGCCAACAACAGCAGCA 60.825 50.000 0.00 0.00 0.00 4.41
2804 3332 1.036481 TGAGCCAACAACAGCAGCAA 61.036 50.000 0.00 0.00 0.00 3.91
2805 3333 0.595825 GAGCCAACAACAGCAGCAAC 60.596 55.000 0.00 0.00 0.00 4.17
2806 3334 1.141449 GCCAACAACAGCAGCAACA 59.859 52.632 0.00 0.00 0.00 3.33
2807 3335 0.459934 GCCAACAACAGCAGCAACAA 60.460 50.000 0.00 0.00 0.00 2.83
2808 3336 1.280066 CCAACAACAGCAGCAACAAC 58.720 50.000 0.00 0.00 0.00 3.32
2809 3337 1.403914 CCAACAACAGCAGCAACAACA 60.404 47.619 0.00 0.00 0.00 3.33
2810 3338 2.335752 CAACAACAGCAGCAACAACAA 58.664 42.857 0.00 0.00 0.00 2.83
2811 3339 1.994916 ACAACAGCAGCAACAACAAC 58.005 45.000 0.00 0.00 0.00 3.32
2812 3340 1.271934 ACAACAGCAGCAACAACAACA 59.728 42.857 0.00 0.00 0.00 3.33
2813 3341 2.288702 ACAACAGCAGCAACAACAACAA 60.289 40.909 0.00 0.00 0.00 2.83
2814 3342 1.994916 ACAGCAGCAACAACAACAAC 58.005 45.000 0.00 0.00 0.00 3.32
2815 3343 1.271934 ACAGCAGCAACAACAACAACA 59.728 42.857 0.00 0.00 0.00 3.33
2816 3344 2.288702 ACAGCAGCAACAACAACAACAA 60.289 40.909 0.00 0.00 0.00 2.83
2817 3345 2.092524 CAGCAGCAACAACAACAACAAC 59.907 45.455 0.00 0.00 0.00 3.32
2818 3346 2.064762 GCAGCAACAACAACAACAACA 58.935 42.857 0.00 0.00 0.00 3.33
2819 3347 2.478134 GCAGCAACAACAACAACAACAA 59.522 40.909 0.00 0.00 0.00 2.83
2820 3348 3.059325 GCAGCAACAACAACAACAACAAA 60.059 39.130 0.00 0.00 0.00 2.83
2821 3349 4.700332 CAGCAACAACAACAACAACAAAG 58.300 39.130 0.00 0.00 0.00 2.77
2822 3350 3.186205 AGCAACAACAACAACAACAAAGC 59.814 39.130 0.00 0.00 0.00 3.51
2823 3351 3.666638 GCAACAACAACAACAACAAAGCC 60.667 43.478 0.00 0.00 0.00 4.35
2824 3352 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
2825 3353 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
2826 3354 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
2827 3355 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
2828 3356 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
2829 3357 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
2830 3358 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
2831 3359 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
2832 3360 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
2833 3361 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
2834 3362 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
2835 3363 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
2836 3364 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
2837 3365 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
2838 3366 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
2839 3367 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
2840 3368 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
2841 3369 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
2842 3370 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
2851 3379 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
2852 3380 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
2853 3381 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
2854 3382 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
2855 3383 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
2856 3384 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
2857 3385 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
2858 3386 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
2859 3387 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
2860 3388 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
2861 3389 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
2862 3390 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
2877 3405 3.531538 GTGAAACCCATAAGATCTCGCA 58.468 45.455 0.00 0.00 0.00 5.10
2878 3406 3.938963 GTGAAACCCATAAGATCTCGCAA 59.061 43.478 0.00 0.00 0.00 4.85
2879 3407 3.938963 TGAAACCCATAAGATCTCGCAAC 59.061 43.478 0.00 0.00 0.00 4.17
2880 3408 2.622064 ACCCATAAGATCTCGCAACC 57.378 50.000 0.00 0.00 0.00 3.77
2881 3409 1.837439 ACCCATAAGATCTCGCAACCA 59.163 47.619 0.00 0.00 0.00 3.67
2882 3410 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
2883 3411 2.614057 CCCATAAGATCTCGCAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
2884 3412 3.535561 CCATAAGATCTCGCAACCAACT 58.464 45.455 0.00 0.00 0.00 3.16
2885 3413 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
2886 3414 2.839486 AAGATCTCGCAACCAACTCA 57.161 45.000 0.00 0.00 0.00 3.41
2887 3415 3.340814 AAGATCTCGCAACCAACTCAT 57.659 42.857 0.00 0.00 0.00 2.90
2888 3416 2.625737 AGATCTCGCAACCAACTCATG 58.374 47.619 0.00 0.00 0.00 3.07
2896 3424 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
2897 3425 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
2898 3426 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
2899 3427 0.607217 CAACTCATGGCTCTGGCACA 60.607 55.000 0.00 0.00 41.84 4.57
2900 3428 0.330604 AACTCATGGCTCTGGCACAT 59.669 50.000 0.00 0.00 41.84 3.21
2901 3429 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
2902 3430 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
2903 3431 1.077285 CATGGCTCTGGCACATGGA 60.077 57.895 7.68 0.00 41.84 3.41
2904 3432 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
2905 3433 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
2906 3434 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
2907 3435 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
2908 3436 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
2909 3437 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
2910 3438 2.219458 CTCTGGCACATGGATAGCAAG 58.781 52.381 0.00 0.00 38.20 4.01
2911 3439 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
2912 3440 0.256752 TGGCACATGGATAGCAAGCT 59.743 50.000 0.00 0.00 0.00 3.74
2913 3441 1.341285 TGGCACATGGATAGCAAGCTT 60.341 47.619 0.00 0.00 0.00 3.74
2914 3442 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
2915 3443 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
2916 3444 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
2917 3445 2.357009 CACATGGATAGCAAGCTTCCAC 59.643 50.000 20.41 0.00 42.09 4.02
2918 3446 1.600957 CATGGATAGCAAGCTTCCACG 59.399 52.381 20.41 13.24 42.09 4.94
2919 3447 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
2920 3448 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
2921 3449 0.375106 GATAGCAAGCTTCCACGCAC 59.625 55.000 8.96 0.00 0.00 5.34
2922 3450 1.026718 ATAGCAAGCTTCCACGCACC 61.027 55.000 8.96 0.00 0.00 5.01
2923 3451 4.043200 GCAAGCTTCCACGCACCC 62.043 66.667 0.00 0.00 0.00 4.61
2924 3452 3.365265 CAAGCTTCCACGCACCCC 61.365 66.667 0.00 0.00 0.00 4.95
2925 3453 3.570212 AAGCTTCCACGCACCCCT 61.570 61.111 0.00 0.00 0.00 4.79
2926 3454 3.850098 AAGCTTCCACGCACCCCTG 62.850 63.158 0.00 0.00 0.00 4.45
2927 3455 4.643387 GCTTCCACGCACCCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
2928 3456 2.358737 CTTCCACGCACCCCTGTC 60.359 66.667 0.00 0.00 0.00 3.51
2929 3457 3.901797 CTTCCACGCACCCCTGTCC 62.902 68.421 0.00 0.00 0.00 4.02
2931 3459 4.033776 CCACGCACCCCTGTCCAT 62.034 66.667 0.00 0.00 0.00 3.41
2932 3460 2.665089 CCACGCACCCCTGTCCATA 61.665 63.158 0.00 0.00 0.00 2.74
2933 3461 1.153369 CACGCACCCCTGTCCATAG 60.153 63.158 0.00 0.00 0.00 2.23
2934 3462 2.203070 CGCACCCCTGTCCATAGC 60.203 66.667 0.00 0.00 0.00 2.97
2935 3463 2.735772 CGCACCCCTGTCCATAGCT 61.736 63.158 0.00 0.00 0.00 3.32
2936 3464 1.399744 CGCACCCCTGTCCATAGCTA 61.400 60.000 0.00 0.00 0.00 3.32
2937 3465 0.394565 GCACCCCTGTCCATAGCTAG 59.605 60.000 0.00 0.00 0.00 3.42
2938 3466 0.394565 CACCCCTGTCCATAGCTAGC 59.605 60.000 6.62 6.62 0.00 3.42
2939 3467 0.764752 ACCCCTGTCCATAGCTAGCC 60.765 60.000 12.13 0.00 0.00 3.93
2940 3468 1.484444 CCCCTGTCCATAGCTAGCCC 61.484 65.000 12.13 0.00 0.00 5.19
2941 3469 0.472734 CCCTGTCCATAGCTAGCCCT 60.473 60.000 12.13 0.00 0.00 5.19
2942 3470 1.428869 CCTGTCCATAGCTAGCCCTT 58.571 55.000 12.13 0.00 0.00 3.95
2943 3471 1.771255 CCTGTCCATAGCTAGCCCTTT 59.229 52.381 12.13 0.00 0.00 3.11
2944 3472 2.486191 CCTGTCCATAGCTAGCCCTTTG 60.486 54.545 12.13 4.01 0.00 2.77
2945 3473 2.171448 CTGTCCATAGCTAGCCCTTTGT 59.829 50.000 12.13 0.00 0.00 2.83
2946 3474 2.170607 TGTCCATAGCTAGCCCTTTGTC 59.829 50.000 12.13 0.00 0.00 3.18
2947 3475 1.412710 TCCATAGCTAGCCCTTTGTCG 59.587 52.381 12.13 0.00 0.00 4.35
2948 3476 1.412710 CCATAGCTAGCCCTTTGTCGA 59.587 52.381 12.13 0.00 0.00 4.20
2949 3477 2.037772 CCATAGCTAGCCCTTTGTCGAT 59.962 50.000 12.13 0.00 0.00 3.59
2950 3478 3.258372 CCATAGCTAGCCCTTTGTCGATA 59.742 47.826 12.13 0.00 0.00 2.92
2951 3479 2.892784 AGCTAGCCCTTTGTCGATAC 57.107 50.000 12.13 0.00 0.00 2.24
2952 3480 2.389715 AGCTAGCCCTTTGTCGATACT 58.610 47.619 12.13 0.00 0.00 2.12
2953 3481 2.766828 AGCTAGCCCTTTGTCGATACTT 59.233 45.455 12.13 0.00 0.00 2.24
2954 3482 3.124560 GCTAGCCCTTTGTCGATACTTC 58.875 50.000 2.29 0.00 0.00 3.01
2955 3483 3.430374 GCTAGCCCTTTGTCGATACTTCA 60.430 47.826 2.29 0.00 0.00 3.02
2956 3484 3.695830 AGCCCTTTGTCGATACTTCAA 57.304 42.857 0.00 0.00 0.00 2.69
2957 3485 4.222124 AGCCCTTTGTCGATACTTCAAT 57.778 40.909 0.00 0.00 0.00 2.57
2958 3486 4.192317 AGCCCTTTGTCGATACTTCAATC 58.808 43.478 0.00 0.00 0.00 2.67
2959 3487 3.312697 GCCCTTTGTCGATACTTCAATCC 59.687 47.826 0.00 0.00 0.00 3.01
2960 3488 4.770795 CCCTTTGTCGATACTTCAATCCT 58.229 43.478 0.00 0.00 0.00 3.24
2961 3489 5.186198 CCCTTTGTCGATACTTCAATCCTT 58.814 41.667 0.00 0.00 0.00 3.36
2962 3490 5.294552 CCCTTTGTCGATACTTCAATCCTTC 59.705 44.000 0.00 0.00 0.00 3.46
2963 3491 5.874810 CCTTTGTCGATACTTCAATCCTTCA 59.125 40.000 0.00 0.00 0.00 3.02
2964 3492 6.036517 CCTTTGTCGATACTTCAATCCTTCAG 59.963 42.308 0.00 0.00 0.00 3.02
2965 3493 5.011090 TGTCGATACTTCAATCCTTCAGG 57.989 43.478 0.00 0.00 0.00 3.86
2966 3494 4.466370 TGTCGATACTTCAATCCTTCAGGT 59.534 41.667 0.00 0.00 36.34 4.00
2967 3495 5.044558 GTCGATACTTCAATCCTTCAGGTC 58.955 45.833 0.00 0.00 36.34 3.85
2968 3496 4.956700 TCGATACTTCAATCCTTCAGGTCT 59.043 41.667 0.00 0.00 36.34 3.85
2969 3497 5.067936 TCGATACTTCAATCCTTCAGGTCTC 59.932 44.000 0.00 0.00 36.34 3.36
2970 3498 5.068460 CGATACTTCAATCCTTCAGGTCTCT 59.932 44.000 0.00 0.00 36.34 3.10
2971 3499 4.817318 ACTTCAATCCTTCAGGTCTCTC 57.183 45.455 0.00 0.00 36.34 3.20
2972 3500 4.424842 ACTTCAATCCTTCAGGTCTCTCT 58.575 43.478 0.00 0.00 36.34 3.10
2973 3501 4.843516 ACTTCAATCCTTCAGGTCTCTCTT 59.156 41.667 0.00 0.00 36.34 2.85
2974 3502 6.019748 ACTTCAATCCTTCAGGTCTCTCTTA 58.980 40.000 0.00 0.00 36.34 2.10
2975 3503 6.498651 ACTTCAATCCTTCAGGTCTCTCTTAA 59.501 38.462 0.00 0.00 36.34 1.85
2976 3504 6.287589 TCAATCCTTCAGGTCTCTCTTAAC 57.712 41.667 0.00 0.00 36.34 2.01
2977 3505 4.993029 ATCCTTCAGGTCTCTCTTAACG 57.007 45.455 0.00 0.00 36.34 3.18
2978 3506 3.090037 TCCTTCAGGTCTCTCTTAACGG 58.910 50.000 0.00 0.00 36.34 4.44
2979 3507 3.090037 CCTTCAGGTCTCTCTTAACGGA 58.910 50.000 0.00 0.00 0.00 4.69
2980 3508 3.119424 CCTTCAGGTCTCTCTTAACGGAC 60.119 52.174 0.00 0.00 0.00 4.79
2981 3509 3.436577 TCAGGTCTCTCTTAACGGACT 57.563 47.619 0.00 0.00 0.00 3.85
2982 3510 3.345414 TCAGGTCTCTCTTAACGGACTC 58.655 50.000 0.00 0.00 0.00 3.36
2983 3511 2.424246 CAGGTCTCTCTTAACGGACTCC 59.576 54.545 0.00 0.00 0.00 3.85
2984 3512 2.309458 AGGTCTCTCTTAACGGACTCCT 59.691 50.000 0.00 0.00 0.00 3.69
2985 3513 2.684374 GGTCTCTCTTAACGGACTCCTC 59.316 54.545 0.00 0.00 0.00 3.71
2986 3514 2.684374 GTCTCTCTTAACGGACTCCTCC 59.316 54.545 0.00 0.00 0.00 4.30
2987 3515 2.025898 CTCTCTTAACGGACTCCTCCC 58.974 57.143 0.00 0.00 31.93 4.30
2988 3516 1.356738 TCTCTTAACGGACTCCTCCCA 59.643 52.381 0.00 0.00 31.93 4.37
2989 3517 2.024273 TCTCTTAACGGACTCCTCCCAT 60.024 50.000 0.00 0.00 31.93 4.00
2990 3518 2.101582 CTCTTAACGGACTCCTCCCATG 59.898 54.545 0.00 0.00 31.93 3.66
2991 3519 1.831736 CTTAACGGACTCCTCCCATGT 59.168 52.381 0.00 0.00 31.93 3.21
2992 3520 1.481871 TAACGGACTCCTCCCATGTC 58.518 55.000 0.00 0.00 31.93 3.06
2993 3521 0.544357 AACGGACTCCTCCCATGTCA 60.544 55.000 0.00 0.00 31.93 3.58
2994 3522 0.544357 ACGGACTCCTCCCATGTCAA 60.544 55.000 0.00 0.00 31.93 3.18
2995 3523 0.613260 CGGACTCCTCCCATGTCAAA 59.387 55.000 0.00 0.00 31.93 2.69
2996 3524 1.210478 CGGACTCCTCCCATGTCAAAT 59.790 52.381 0.00 0.00 31.93 2.32
2997 3525 2.356125 CGGACTCCTCCCATGTCAAATT 60.356 50.000 0.00 0.00 31.93 1.82
2998 3526 3.282885 GGACTCCTCCCATGTCAAATTC 58.717 50.000 0.00 0.00 32.84 2.17
2999 3527 2.939103 GACTCCTCCCATGTCAAATTCG 59.061 50.000 0.00 0.00 0.00 3.34
3000 3528 2.292267 CTCCTCCCATGTCAAATTCGG 58.708 52.381 0.00 0.00 0.00 4.30
3001 3529 1.633432 TCCTCCCATGTCAAATTCGGT 59.367 47.619 0.00 0.00 0.00 4.69
3002 3530 2.017049 CCTCCCATGTCAAATTCGGTC 58.983 52.381 0.00 0.00 0.00 4.79
3003 3531 1.665679 CTCCCATGTCAAATTCGGTCG 59.334 52.381 0.00 0.00 0.00 4.79
3004 3532 1.276705 TCCCATGTCAAATTCGGTCGA 59.723 47.619 0.00 0.00 0.00 4.20
3005 3533 1.396996 CCCATGTCAAATTCGGTCGAC 59.603 52.381 7.13 7.13 0.00 4.20
3006 3534 1.396996 CCATGTCAAATTCGGTCGACC 59.603 52.381 25.28 25.28 0.00 4.79
3007 3535 1.396996 CATGTCAAATTCGGTCGACCC 59.603 52.381 28.52 12.33 0.00 4.46
3008 3536 0.320946 TGTCAAATTCGGTCGACCCC 60.321 55.000 28.52 5.39 0.00 4.95
3018 3546 4.377760 TCGACCCCGCCCTCTCTT 62.378 66.667 0.00 0.00 35.37 2.85
3019 3547 4.148825 CGACCCCGCCCTCTCTTG 62.149 72.222 0.00 0.00 0.00 3.02
3020 3548 3.787001 GACCCCGCCCTCTCTTGG 61.787 72.222 0.00 0.00 0.00 3.61
3021 3549 4.658786 ACCCCGCCCTCTCTTGGT 62.659 66.667 0.00 0.00 0.00 3.67
3022 3550 2.365105 CCCCGCCCTCTCTTGGTA 60.365 66.667 0.00 0.00 0.00 3.25
3023 3551 1.766461 CCCCGCCCTCTCTTGGTAT 60.766 63.158 0.00 0.00 0.00 2.73
3024 3552 0.471211 CCCCGCCCTCTCTTGGTATA 60.471 60.000 0.00 0.00 0.00 1.47
3025 3553 0.969894 CCCGCCCTCTCTTGGTATAG 59.030 60.000 0.00 0.00 0.00 1.31
3026 3554 1.480683 CCCGCCCTCTCTTGGTATAGA 60.481 57.143 0.00 0.00 0.00 1.98
3027 3555 2.317040 CCGCCCTCTCTTGGTATAGAA 58.683 52.381 0.00 0.00 0.00 2.10
3028 3556 2.900546 CCGCCCTCTCTTGGTATAGAAT 59.099 50.000 0.00 0.00 0.00 2.40
3029 3557 3.306364 CCGCCCTCTCTTGGTATAGAATG 60.306 52.174 0.00 0.00 0.00 2.67
3030 3558 3.574396 CGCCCTCTCTTGGTATAGAATGA 59.426 47.826 0.00 0.00 0.00 2.57
3031 3559 4.321601 CGCCCTCTCTTGGTATAGAATGAG 60.322 50.000 0.00 0.00 0.00 2.90
3032 3560 4.562552 GCCCTCTCTTGGTATAGAATGAGC 60.563 50.000 0.00 0.00 0.00 4.26
3033 3561 4.020662 CCCTCTCTTGGTATAGAATGAGCC 60.021 50.000 0.00 0.00 0.00 4.70
3034 3562 4.321601 CCTCTCTTGGTATAGAATGAGCCG 60.322 50.000 0.00 0.00 0.00 5.52
3035 3563 4.215908 TCTCTTGGTATAGAATGAGCCGT 58.784 43.478 0.00 0.00 0.00 5.68
3039 3567 4.746535 TGGTATAGAATGAGCCGTGAAA 57.253 40.909 0.00 0.00 0.00 2.69
3065 3596 5.493133 AAAACATTGCTCGTTCAAGTGTA 57.507 34.783 0.00 0.00 0.00 2.90
3069 3600 4.627467 ACATTGCTCGTTCAAGTGTATCTC 59.373 41.667 0.00 0.00 0.00 2.75
3079 3610 6.541086 GTTCAAGTGTATCTCTTTCATGCTG 58.459 40.000 0.00 0.00 0.00 4.41
3091 3622 1.278537 TCATGCTGGTGATGGTGAGA 58.721 50.000 0.00 0.00 0.00 3.27
3124 3696 3.369175 AGATACAGGTGCTCTGATGTCA 58.631 45.455 13.18 0.00 46.18 3.58
3132 3704 4.122776 GGTGCTCTGATGTCACGATTTAT 58.877 43.478 0.00 0.00 0.00 1.40
3142 3714 5.621197 TGTCACGATTTATCAAGGTTTGG 57.379 39.130 0.00 0.00 0.00 3.28
3161 3733 0.036022 GAGTCAGCCTCACCTGCTTT 59.964 55.000 0.00 0.00 40.17 3.51
3248 3820 1.373570 GAACTTCCCCAGCTTCATCG 58.626 55.000 0.00 0.00 0.00 3.84
3254 3826 1.817099 CCCAGCTTCATCGTCAGGC 60.817 63.158 0.00 0.00 0.00 4.85
3295 3867 3.118334 AGCTCCCAGTCAATCAAGAGATG 60.118 47.826 0.00 0.00 33.90 2.90
3303 3875 6.128336 CCAGTCAATCAAGAGATGAGAAACAC 60.128 42.308 0.00 0.00 42.53 3.32
3316 3889 6.603201 AGATGAGAAACACCAGACAAAAGAAA 59.397 34.615 0.00 0.00 0.00 2.52
3337 3910 0.316204 CCAAACCAAGAAGGCTGCAG 59.684 55.000 10.11 10.11 43.14 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.605275 TTTTCATGGTTCTCATCTCTGTATAAG 57.395 33.333 0.00 0.00 32.92 1.73
10 11 6.541641 GCTTTTCATGGTTCTCATCTCTGTAT 59.458 38.462 0.00 0.00 32.92 2.29
11 12 5.877012 GCTTTTCATGGTTCTCATCTCTGTA 59.123 40.000 0.00 0.00 32.92 2.74
12 13 4.699257 GCTTTTCATGGTTCTCATCTCTGT 59.301 41.667 0.00 0.00 32.92 3.41
44 45 5.617252 TCCTCGGTGTCTGTTTTCTTATTT 58.383 37.500 0.00 0.00 0.00 1.40
59 60 0.601558 TCGTTTCCTCTTCCTCGGTG 59.398 55.000 0.00 0.00 0.00 4.94
63 64 3.388345 AGTGTTCGTTTCCTCTTCCTC 57.612 47.619 0.00 0.00 0.00 3.71
78 79 6.828785 AGTTGTCTTCCTTTGATGTTAGTGTT 59.171 34.615 0.00 0.00 0.00 3.32
187 194 4.174762 GGTTTGACGAGTGAGAAGGATAC 58.825 47.826 0.00 0.00 0.00 2.24
220 227 4.191544 TGTGGAGTTTGACTTTGACTGAG 58.808 43.478 0.00 0.00 0.00 3.35
222 229 4.963276 TTGTGGAGTTTGACTTTGACTG 57.037 40.909 0.00 0.00 0.00 3.51
230 237 7.703328 TGTTCTTAGAAATTGTGGAGTTTGAC 58.297 34.615 0.00 0.00 0.00 3.18
235 242 8.793592 GGTTTATGTTCTTAGAAATTGTGGAGT 58.206 33.333 0.00 0.00 0.00 3.85
236 243 8.244113 GGGTTTATGTTCTTAGAAATTGTGGAG 58.756 37.037 0.00 0.00 0.00 3.86
237 244 7.726291 TGGGTTTATGTTCTTAGAAATTGTGGA 59.274 33.333 0.00 0.00 0.00 4.02
239 246 8.576442 ACTGGGTTTATGTTCTTAGAAATTGTG 58.424 33.333 0.00 0.00 0.00 3.33
246 446 5.104652 GGGCTACTGGGTTTATGTTCTTAGA 60.105 44.000 0.00 0.00 0.00 2.10
247 447 5.123936 GGGCTACTGGGTTTATGTTCTTAG 58.876 45.833 0.00 0.00 0.00 2.18
271 471 7.060421 TGAGTTTTGAACATAACCTTCCTTCT 58.940 34.615 4.95 0.00 0.00 2.85
277 477 7.712797 ACGAAATGAGTTTTGAACATAACCTT 58.287 30.769 0.00 0.00 33.67 3.50
279 479 9.620660 AATACGAAATGAGTTTTGAACATAACC 57.379 29.630 0.00 0.00 33.67 2.85
281 481 9.536558 CGAATACGAAATGAGTTTTGAACATAA 57.463 29.630 0.00 0.00 42.66 1.90
283 483 7.802738 TCGAATACGAAATGAGTTTTGAACAT 58.197 30.769 0.00 0.00 45.74 2.71
333 533 1.470098 GCCACCATTGTCAACTAGCAG 59.530 52.381 0.00 0.00 0.00 4.24
335 535 0.447801 CGCCACCATTGTCAACTAGC 59.552 55.000 0.00 0.00 0.00 3.42
345 545 4.875713 GGGATCGCCGCCACCATT 62.876 66.667 0.00 0.00 33.83 3.16
350 550 3.479203 ATCAAGGGATCGCCGCCA 61.479 61.111 6.09 0.00 33.83 5.69
357 557 4.648307 AGAAAATGGCTTCATCAAGGGATC 59.352 41.667 0.00 0.00 0.00 3.36
377 577 0.032952 ACACCGCGAGCAACTAAGAA 59.967 50.000 8.23 0.00 0.00 2.52
398 598 0.969917 CATCCCCATTCCAAACGGCA 60.970 55.000 0.00 0.00 0.00 5.69
401 601 2.166829 TCAACATCCCCATTCCAAACG 58.833 47.619 0.00 0.00 0.00 3.60
423 623 0.040942 AGCCCATACCAAACATGGCA 59.959 50.000 0.00 0.00 41.46 4.92
427 627 2.102578 GAAGCAGCCCATACCAAACAT 58.897 47.619 0.00 0.00 0.00 2.71
441 641 1.153939 CCGACGTCCTGAGAAGCAG 60.154 63.158 10.58 0.00 44.49 4.24
468 668 1.469126 GACGACGTTGCATATCGCGT 61.469 55.000 5.77 18.98 46.97 6.01
472 672 2.331569 CGTTGACGACGTTGCATATC 57.668 50.000 0.13 0.00 46.49 1.63
482 682 0.037605 ATGGAGGAACCGTTGACGAC 60.038 55.000 4.91 0.00 43.02 4.34
488 688 1.978580 AGAAGTCATGGAGGAACCGTT 59.021 47.619 0.00 0.00 42.61 4.44
514 714 0.682209 GTAGGACCTGACCACGCCTA 60.682 60.000 3.53 0.00 0.00 3.93
555 755 0.882927 GTGCACTCACCTTAACGCCA 60.883 55.000 10.32 0.00 37.24 5.69
557 757 0.234884 GTGTGCACTCACCTTAACGC 59.765 55.000 19.41 0.00 42.46 4.84
564 764 1.016130 CGGATCAGTGTGCACTCACC 61.016 60.000 19.41 14.42 42.46 4.02
565 765 1.630244 GCGGATCAGTGTGCACTCAC 61.630 60.000 19.41 8.98 40.20 3.51
566 766 1.374631 GCGGATCAGTGTGCACTCA 60.375 57.895 19.41 0.00 40.20 3.41
572 772 0.670546 AAACCGAGCGGATCAGTGTG 60.671 55.000 16.83 0.00 38.96 3.82
576 776 0.391130 TCCAAAACCGAGCGGATCAG 60.391 55.000 16.83 2.89 38.96 2.90
621 821 2.250939 CGTGTCACGGCCAATGTGT 61.251 57.895 17.75 0.00 38.08 3.72
651 851 5.871465 GCTTAAGACTTGAAGCTAGCTTT 57.129 39.130 29.84 15.08 43.84 3.51
720 931 1.062733 CTCGATCGAACGAAGAGCTGA 59.937 52.381 19.92 0.00 41.67 4.26
732 943 3.427638 CCTGTGAAGCTAAACTCGATCGA 60.428 47.826 18.32 18.32 0.00 3.59
924 1281 4.183686 TGGCGTAGACGTAGCGGC 62.184 66.667 19.94 19.94 41.59 6.53
925 1282 2.024305 CTGGCGTAGACGTAGCGG 59.976 66.667 3.73 0.00 41.59 5.52
927 1284 2.651232 CGCTGGCGTAGACGTAGC 60.651 66.667 17.62 17.62 41.59 3.58
962 1344 4.270577 GGGGGAGGGGAGAAAAGT 57.729 61.111 0.00 0.00 0.00 2.66
1286 1683 0.617535 TCTCCGGCCCTGATTCTTCA 60.618 55.000 0.00 0.00 0.00 3.02
1379 1790 9.368416 ACAGATGATAATGGTACAGTAGTATGT 57.632 33.333 0.00 0.00 43.88 2.29
1380 1791 9.631452 CACAGATGATAATGGTACAGTAGTATG 57.369 37.037 0.00 0.00 43.88 2.39
1381 1792 8.307483 GCACAGATGATAATGGTACAGTAGTAT 58.693 37.037 0.00 0.00 43.88 2.12
1382 1793 7.286775 TGCACAGATGATAATGGTACAGTAGTA 59.713 37.037 0.00 0.00 43.88 1.82
1383 1794 6.098266 TGCACAGATGATAATGGTACAGTAGT 59.902 38.462 0.00 0.00 43.88 2.73
1384 1795 6.422100 GTGCACAGATGATAATGGTACAGTAG 59.578 42.308 13.17 0.00 43.88 2.57
1389 1800 5.107337 CGATGTGCACAGATGATAATGGTAC 60.107 44.000 25.84 0.00 0.00 3.34
1390 1801 4.990426 CGATGTGCACAGATGATAATGGTA 59.010 41.667 25.84 0.00 0.00 3.25
1391 1802 3.811497 CGATGTGCACAGATGATAATGGT 59.189 43.478 25.84 2.97 0.00 3.55
1392 1803 4.060205 TCGATGTGCACAGATGATAATGG 58.940 43.478 25.84 7.07 0.00 3.16
1393 1804 5.857822 ATCGATGTGCACAGATGATAATG 57.142 39.130 25.84 6.67 0.00 1.90
1394 1805 6.928520 TCTATCGATGTGCACAGATGATAAT 58.071 36.000 25.84 12.90 0.00 1.28
1395 1806 6.331369 TCTATCGATGTGCACAGATGATAA 57.669 37.500 25.84 16.55 0.00 1.75
1396 1807 5.964958 TCTATCGATGTGCACAGATGATA 57.035 39.130 25.84 25.23 0.00 2.15
1397 1808 4.861102 TCTATCGATGTGCACAGATGAT 57.139 40.909 25.84 25.44 0.00 2.45
1398 1809 4.654091 TTCTATCGATGTGCACAGATGA 57.346 40.909 25.84 21.02 0.00 2.92
1399 1810 5.512573 GATTCTATCGATGTGCACAGATG 57.487 43.478 25.84 16.52 0.00 2.90
1441 1856 4.633565 GGAGTGAGTTCATAGGCAAGAAAG 59.366 45.833 0.00 0.00 0.00 2.62
1443 1858 3.840666 AGGAGTGAGTTCATAGGCAAGAA 59.159 43.478 0.00 0.00 0.00 2.52
1445 1860 3.529533 CAGGAGTGAGTTCATAGGCAAG 58.470 50.000 0.00 0.00 0.00 4.01
1446 1861 2.237143 CCAGGAGTGAGTTCATAGGCAA 59.763 50.000 0.00 0.00 0.00 4.52
1447 1862 1.833630 CCAGGAGTGAGTTCATAGGCA 59.166 52.381 0.00 0.00 0.00 4.75
1448 1863 1.474143 GCCAGGAGTGAGTTCATAGGC 60.474 57.143 0.00 0.00 0.00 3.93
1449 1864 1.139853 GGCCAGGAGTGAGTTCATAGG 59.860 57.143 0.00 0.00 0.00 2.57
1455 1913 3.384168 TGTATATGGCCAGGAGTGAGTT 58.616 45.455 13.05 0.00 0.00 3.01
1641 2102 6.097439 TCATATATACCTGGATCCTCAGCT 57.903 41.667 14.23 0.00 33.64 4.24
1696 2157 2.041620 TGAGGATCTGTTCAAAAGGGGG 59.958 50.000 0.00 0.00 34.92 5.40
1700 2161 6.600822 ACCATACATGAGGATCTGTTCAAAAG 59.399 38.462 0.00 0.00 34.92 2.27
1705 2166 5.282055 TCACCATACATGAGGATCTGTTC 57.718 43.478 0.00 0.00 34.92 3.18
1712 2173 3.812262 CTTGCATCACCATACATGAGGA 58.188 45.455 0.00 0.00 29.31 3.71
1713 2174 2.292569 GCTTGCATCACCATACATGAGG 59.707 50.000 0.00 0.35 0.00 3.86
1714 2175 2.946990 TGCTTGCATCACCATACATGAG 59.053 45.455 0.00 0.00 0.00 2.90
1715 2176 3.002038 TGCTTGCATCACCATACATGA 57.998 42.857 0.00 0.00 0.00 3.07
1716 2177 3.316868 TCATGCTTGCATCACCATACATG 59.683 43.478 4.99 0.00 35.99 3.21
1717 2178 3.558033 TCATGCTTGCATCACCATACAT 58.442 40.909 4.99 0.00 0.00 2.29
1718 2179 3.002038 TCATGCTTGCATCACCATACA 57.998 42.857 4.99 0.00 0.00 2.29
1719 2180 3.379372 ACTTCATGCTTGCATCACCATAC 59.621 43.478 4.99 0.00 0.00 2.39
1721 2182 2.453521 ACTTCATGCTTGCATCACCAT 58.546 42.857 4.99 0.00 0.00 3.55
1722 2183 1.913778 ACTTCATGCTTGCATCACCA 58.086 45.000 4.99 0.00 0.00 4.17
1723 2184 2.749076 TGTACTTCATGCTTGCATCACC 59.251 45.455 4.99 0.00 0.00 4.02
1725 2186 3.678289 ACTGTACTTCATGCTTGCATCA 58.322 40.909 4.99 0.00 0.00 3.07
1726 2187 5.998454 ATACTGTACTTCATGCTTGCATC 57.002 39.130 4.99 0.00 0.00 3.91
1727 2188 6.072838 GCATATACTGTACTTCATGCTTGCAT 60.073 38.462 1.81 1.81 36.66 3.96
1728 2189 5.237127 GCATATACTGTACTTCATGCTTGCA 59.763 40.000 13.75 0.00 36.66 4.08
1729 2190 5.237127 TGCATATACTGTACTTCATGCTTGC 59.763 40.000 18.31 7.32 39.53 4.01
1730 2191 6.849588 TGCATATACTGTACTTCATGCTTG 57.150 37.500 18.31 0.00 39.53 4.01
1731 2192 7.050377 AGTTGCATATACTGTACTTCATGCTT 58.950 34.615 18.31 8.25 39.53 3.91
1732 2193 6.586344 AGTTGCATATACTGTACTTCATGCT 58.414 36.000 18.31 4.69 39.53 3.79
1734 2195 9.313118 TGTTAGTTGCATATACTGTACTTCATG 57.687 33.333 0.00 0.00 0.00 3.07
1735 2196 9.884636 TTGTTAGTTGCATATACTGTACTTCAT 57.115 29.630 0.00 0.00 0.00 2.57
1736 2197 9.884636 ATTGTTAGTTGCATATACTGTACTTCA 57.115 29.630 0.00 0.00 0.00 3.02
1747 2208 9.571810 CACACATGTAAATTGTTAGTTGCATAT 57.428 29.630 0.00 0.00 33.41 1.78
1748 2209 7.540400 GCACACATGTAAATTGTTAGTTGCATA 59.460 33.333 0.00 0.00 33.41 3.14
1753 2214 7.261325 TGTTGCACACATGTAAATTGTTAGTT 58.739 30.769 0.00 0.00 31.71 2.24
1763 2224 2.683362 TCGGTTTGTTGCACACATGTAA 59.317 40.909 0.00 0.00 34.43 2.41
1764 2225 2.289565 TCGGTTTGTTGCACACATGTA 58.710 42.857 0.00 0.00 34.43 2.29
1766 2227 2.318578 GATCGGTTTGTTGCACACATG 58.681 47.619 0.00 0.00 34.43 3.21
1767 2228 1.069296 CGATCGGTTTGTTGCACACAT 60.069 47.619 7.38 0.00 34.43 3.21
1768 2229 0.306228 CGATCGGTTTGTTGCACACA 59.694 50.000 7.38 0.00 0.00 3.72
1769 2230 0.385473 CCGATCGGTTTGTTGCACAC 60.385 55.000 26.35 0.00 0.00 3.82
1770 2231 1.945522 CCGATCGGTTTGTTGCACA 59.054 52.632 26.35 0.00 0.00 4.57
1771 2232 4.838959 CCGATCGGTTTGTTGCAC 57.161 55.556 26.35 0.00 0.00 4.57
1843 2304 2.202570 CATTCTGCTTGCTGCCGC 60.203 61.111 0.00 0.04 42.00 6.53
1845 2306 0.527817 GATGCATTCTGCTTGCTGCC 60.528 55.000 0.00 0.00 45.31 4.85
1893 2354 5.048846 CCATGGCTTACTATTACCTTGGT 57.951 43.478 0.00 0.00 40.75 3.67
1931 2402 4.438472 GCTAGAGATCGAAACCTAACGTGT 60.438 45.833 0.00 0.00 0.00 4.49
1934 2405 3.289911 CGCTAGAGATCGAAACCTAACG 58.710 50.000 0.00 0.00 0.00 3.18
1935 2406 3.044286 GCGCTAGAGATCGAAACCTAAC 58.956 50.000 0.00 0.00 0.00 2.34
1957 2428 1.302511 GTTCAGGGCTTCAGGCGAA 60.303 57.895 0.00 0.00 42.94 4.70
1959 2430 2.747855 GGTTCAGGGCTTCAGGCG 60.748 66.667 0.00 0.00 42.94 5.52
1960 2431 0.613012 AATGGTTCAGGGCTTCAGGC 60.613 55.000 0.00 0.00 40.90 4.85
1961 2432 1.180029 CAATGGTTCAGGGCTTCAGG 58.820 55.000 0.00 0.00 0.00 3.86
1963 2434 2.380064 AACAATGGTTCAGGGCTTCA 57.620 45.000 0.00 0.00 29.00 3.02
2005 2504 1.420138 GTCCCCTTGTCAAACCAGAGA 59.580 52.381 0.00 0.00 0.00 3.10
2047 2546 0.539986 AAGGGTCGGCGTACATCATT 59.460 50.000 6.85 0.00 0.00 2.57
2175 2683 0.764890 ACCTGTGTTTGCTGAGCCTA 59.235 50.000 0.23 0.00 0.00 3.93
2199 2707 5.569355 TGGAGAATGACCAGAATTTTAGCA 58.431 37.500 0.00 0.00 33.22 3.49
2233 2741 1.205893 GAGGCAGTCTCCGATCACTTT 59.794 52.381 0.00 0.00 36.52 2.66
2330 2842 5.047021 CAGTACTCATGATACATCGGGGAAT 60.047 44.000 14.00 0.00 0.00 3.01
2331 2843 4.280929 CAGTACTCATGATACATCGGGGAA 59.719 45.833 14.00 0.00 0.00 3.97
2332 2844 3.826729 CAGTACTCATGATACATCGGGGA 59.173 47.826 14.00 0.00 0.00 4.81
2333 2845 3.056536 CCAGTACTCATGATACATCGGGG 60.057 52.174 14.00 6.74 0.00 5.73
2334 2846 3.056536 CCCAGTACTCATGATACATCGGG 60.057 52.174 14.00 14.61 0.00 5.14
2337 2849 3.324846 TGCCCCAGTACTCATGATACATC 59.675 47.826 14.00 0.00 0.00 3.06
2338 2850 3.071602 GTGCCCCAGTACTCATGATACAT 59.928 47.826 14.00 0.00 0.00 2.29
2339 2851 2.434336 GTGCCCCAGTACTCATGATACA 59.566 50.000 14.00 0.00 0.00 2.29
2376 2900 4.827692 TGTACAAGGAACGAATATGTGCT 58.172 39.130 0.00 0.00 0.00 4.40
2450 2974 5.353123 ACCATTGTTCGAATGTACCATGTAC 59.647 40.000 0.00 0.00 0.00 2.90
2455 2979 4.280436 AGACCATTGTTCGAATGTACCA 57.720 40.909 0.00 0.00 0.00 3.25
2572 3100 1.273211 ACTACCATTGGGGCAATGCTT 60.273 47.619 4.82 0.00 46.73 3.91
2573 3101 0.336048 ACTACCATTGGGGCAATGCT 59.664 50.000 4.82 0.00 46.73 3.79
2580 3108 5.515106 TCCAAAAATCTACTACCATTGGGG 58.485 41.667 7.78 2.08 44.81 4.96
2692 3220 0.884704 GGAGAGCGTGCCAAAGTCAA 60.885 55.000 0.00 0.00 0.00 3.18
2720 3248 0.396556 ACAAAAGGTTGAGGCGGGTT 60.397 50.000 0.00 0.00 38.20 4.11
2731 3259 3.638160 TCAGGTCACGTACTACAAAAGGT 59.362 43.478 0.00 0.00 0.00 3.50
2732 3260 4.247267 TCAGGTCACGTACTACAAAAGG 57.753 45.455 0.00 0.00 0.00 3.11
2771 3299 5.185454 TGTTGGCTCATTCTATACCAGTTG 58.815 41.667 0.00 0.00 0.00 3.16
2773 3301 5.186198 GTTGTTGGCTCATTCTATACCAGT 58.814 41.667 0.00 0.00 0.00 4.00
2778 3306 4.842574 TGCTGTTGTTGGCTCATTCTATA 58.157 39.130 0.00 0.00 0.00 1.31
2779 3307 3.689347 TGCTGTTGTTGGCTCATTCTAT 58.311 40.909 0.00 0.00 0.00 1.98
2787 3315 1.321805 TGTTGCTGCTGTTGTTGGCT 61.322 50.000 0.00 0.00 0.00 4.75
2788 3316 0.459934 TTGTTGCTGCTGTTGTTGGC 60.460 50.000 0.00 0.00 0.00 4.52
2789 3317 1.280066 GTTGTTGCTGCTGTTGTTGG 58.720 50.000 0.00 0.00 0.00 3.77
2790 3318 1.993542 TGTTGTTGCTGCTGTTGTTG 58.006 45.000 0.00 0.00 0.00 3.33
2791 3319 2.288702 TGTTGTTGTTGCTGCTGTTGTT 60.289 40.909 0.00 0.00 0.00 2.83
2792 3320 1.271934 TGTTGTTGTTGCTGCTGTTGT 59.728 42.857 0.00 0.00 0.00 3.32
2793 3321 1.993542 TGTTGTTGTTGCTGCTGTTG 58.006 45.000 0.00 0.00 0.00 3.33
2794 3322 2.288702 TGTTGTTGTTGTTGCTGCTGTT 60.289 40.909 0.00 0.00 0.00 3.16
2796 3324 1.993542 TGTTGTTGTTGTTGCTGCTG 58.006 45.000 0.00 0.00 0.00 4.41
2798 3326 2.064762 TGTTGTTGTTGTTGTTGCTGC 58.935 42.857 0.00 0.00 0.00 5.25
2799 3327 4.700332 CTTTGTTGTTGTTGTTGTTGCTG 58.300 39.130 0.00 0.00 0.00 4.41
2800 3328 3.186205 GCTTTGTTGTTGTTGTTGTTGCT 59.814 39.130 0.00 0.00 0.00 3.91
2801 3329 3.478063 GCTTTGTTGTTGTTGTTGTTGC 58.522 40.909 0.00 0.00 0.00 4.17
2802 3330 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
2803 3331 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
2804 3332 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
2805 3333 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
2806 3334 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
2807 3335 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
2808 3336 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
2809 3337 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
2810 3338 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
2811 3339 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
2812 3340 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
2813 3341 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
2814 3342 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
2815 3343 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
2816 3344 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
2817 3345 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
2818 3346 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
2819 3347 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
2820 3348 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
2821 3349 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
2832 3360 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
2833 3361 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
2834 3362 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
2835 3363 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
2836 3364 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
2837 3365 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
2838 3366 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
2839 3367 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
2840 3368 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
2841 3369 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
2842 3370 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
2843 3371 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
2844 3372 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
2845 3373 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
2846 3374 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
2847 3375 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
2848 3376 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
2849 3377 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
2850 3378 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
2851 3379 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
2852 3380 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
2853 3381 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
2854 3382 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
2855 3383 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
2856 3384 3.531538 TGCGAGATCTTATGGGTTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
2857 3385 3.904800 TGCGAGATCTTATGGGTTTCA 57.095 42.857 0.00 0.00 0.00 2.69
2858 3386 3.312697 GGTTGCGAGATCTTATGGGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
2859 3387 3.279434 GGTTGCGAGATCTTATGGGTTT 58.721 45.455 0.00 0.00 0.00 3.27
2860 3388 2.238646 TGGTTGCGAGATCTTATGGGTT 59.761 45.455 0.00 0.00 0.00 4.11
2861 3389 1.837439 TGGTTGCGAGATCTTATGGGT 59.163 47.619 0.00 0.00 0.00 4.51
2862 3390 2.614057 GTTGGTTGCGAGATCTTATGGG 59.386 50.000 0.00 0.00 0.00 4.00
2863 3391 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
2864 3392 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
2865 3393 4.471904 TGAGTTGGTTGCGAGATCTTAT 57.528 40.909 0.00 0.00 0.00 1.73
2866 3394 3.953712 TGAGTTGGTTGCGAGATCTTA 57.046 42.857 0.00 0.00 0.00 2.10
2867 3395 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
2868 3396 2.625737 CATGAGTTGGTTGCGAGATCT 58.374 47.619 0.00 0.00 0.00 2.75
2869 3397 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
2870 3398 1.742761 CCATGAGTTGGTTGCGAGAT 58.257 50.000 0.00 0.00 40.99 2.75
2871 3399 3.231734 CCATGAGTTGGTTGCGAGA 57.768 52.632 0.00 0.00 40.99 4.04
2880 3408 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
2881 3409 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
2882 3410 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
2883 3411 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
2884 3412 1.077285 CCATGTGCCAGAGCCATGA 60.077 57.895 14.22 0.00 44.14 3.07
2885 3413 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
2886 3414 1.073444 CTATCCATGTGCCAGAGCCAT 59.927 52.381 0.00 0.00 38.69 4.40
2887 3415 0.471191 CTATCCATGTGCCAGAGCCA 59.529 55.000 0.00 0.00 38.69 4.75
2888 3416 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
2889 3417 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
2890 3418 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
2891 3419 1.748244 GCTTGCTATCCATGTGCCAGA 60.748 52.381 0.00 0.00 0.00 3.86
2892 3420 0.666913 GCTTGCTATCCATGTGCCAG 59.333 55.000 0.00 0.00 0.00 4.85
2893 3421 0.256752 AGCTTGCTATCCATGTGCCA 59.743 50.000 0.00 0.00 0.00 4.92
2894 3422 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
2895 3423 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
2896 3424 2.357009 GTGGAAGCTTGCTATCCATGTG 59.643 50.000 19.34 0.00 44.55 3.21
2897 3425 2.648059 GTGGAAGCTTGCTATCCATGT 58.352 47.619 19.34 0.00 44.55 3.21
2898 3426 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
2899 3427 1.959042 CGTGGAAGCTTGCTATCCAT 58.041 50.000 19.34 0.00 44.55 3.41
2900 3428 0.744414 GCGTGGAAGCTTGCTATCCA 60.744 55.000 19.34 9.80 40.84 3.41
2901 3429 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
2902 3430 0.375106 GTGCGTGGAAGCTTGCTATC 59.625 55.000 19.34 8.59 38.13 2.08
2903 3431 1.026718 GGTGCGTGGAAGCTTGCTAT 61.027 55.000 19.34 0.00 38.13 2.97
2904 3432 1.671054 GGTGCGTGGAAGCTTGCTA 60.671 57.895 19.34 2.82 38.13 3.49
2905 3433 2.980233 GGTGCGTGGAAGCTTGCT 60.980 61.111 19.34 0.00 38.13 3.91
2906 3434 4.043200 GGGTGCGTGGAAGCTTGC 62.043 66.667 11.58 11.58 38.13 4.01
2907 3435 3.365265 GGGGTGCGTGGAAGCTTG 61.365 66.667 2.10 0.00 38.13 4.01
2908 3436 3.570212 AGGGGTGCGTGGAAGCTT 61.570 61.111 0.00 0.00 38.13 3.74
2909 3437 4.335647 CAGGGGTGCGTGGAAGCT 62.336 66.667 0.00 0.00 38.13 3.74
2910 3438 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
2911 3439 2.358737 GACAGGGGTGCGTGGAAG 60.359 66.667 0.00 0.00 0.00 3.46
2912 3440 3.948719 GGACAGGGGTGCGTGGAA 61.949 66.667 0.00 0.00 0.00 3.53
2914 3442 2.593468 CTATGGACAGGGGTGCGTGG 62.593 65.000 0.00 0.00 38.35 4.94
2915 3443 1.153369 CTATGGACAGGGGTGCGTG 60.153 63.158 0.00 0.00 38.35 5.34
2916 3444 3.031417 GCTATGGACAGGGGTGCGT 62.031 63.158 0.00 0.00 38.35 5.24
2917 3445 1.399744 TAGCTATGGACAGGGGTGCG 61.400 60.000 0.00 0.00 38.35 5.34
2918 3446 0.394565 CTAGCTATGGACAGGGGTGC 59.605 60.000 0.00 0.00 35.66 5.01
2919 3447 0.394565 GCTAGCTATGGACAGGGGTG 59.605 60.000 7.70 0.00 0.00 4.61
2920 3448 0.764752 GGCTAGCTATGGACAGGGGT 60.765 60.000 15.72 0.00 0.00 4.95
2921 3449 1.484444 GGGCTAGCTATGGACAGGGG 61.484 65.000 15.72 0.00 0.00 4.79
2922 3450 0.472734 AGGGCTAGCTATGGACAGGG 60.473 60.000 15.72 0.00 0.00 4.45
2923 3451 1.428869 AAGGGCTAGCTATGGACAGG 58.571 55.000 15.72 0.00 0.00 4.00
2924 3452 2.171448 ACAAAGGGCTAGCTATGGACAG 59.829 50.000 15.72 0.40 0.00 3.51
2925 3453 2.170607 GACAAAGGGCTAGCTATGGACA 59.829 50.000 15.72 0.00 0.00 4.02
2926 3454 2.803492 CGACAAAGGGCTAGCTATGGAC 60.803 54.545 15.72 0.00 0.00 4.02
2927 3455 1.412710 CGACAAAGGGCTAGCTATGGA 59.587 52.381 15.72 0.00 0.00 3.41
2928 3456 1.412710 TCGACAAAGGGCTAGCTATGG 59.587 52.381 15.72 3.66 0.00 2.74
2929 3457 2.890808 TCGACAAAGGGCTAGCTATG 57.109 50.000 15.72 10.81 0.00 2.23
2930 3458 4.153411 AGTATCGACAAAGGGCTAGCTAT 58.847 43.478 15.72 0.00 0.00 2.97
2931 3459 3.563223 AGTATCGACAAAGGGCTAGCTA 58.437 45.455 15.72 0.00 0.00 3.32
2932 3460 2.389715 AGTATCGACAAAGGGCTAGCT 58.610 47.619 15.72 0.00 0.00 3.32
2933 3461 2.892784 AGTATCGACAAAGGGCTAGC 57.107 50.000 6.04 6.04 0.00 3.42
2934 3462 4.386867 TGAAGTATCGACAAAGGGCTAG 57.613 45.455 0.00 0.00 0.00 3.42
2935 3463 4.811969 TTGAAGTATCGACAAAGGGCTA 57.188 40.909 0.00 0.00 0.00 3.93
2936 3464 3.695830 TTGAAGTATCGACAAAGGGCT 57.304 42.857 0.00 0.00 0.00 5.19
2937 3465 3.312697 GGATTGAAGTATCGACAAAGGGC 59.687 47.826 0.00 0.00 0.00 5.19
2938 3466 4.770795 AGGATTGAAGTATCGACAAAGGG 58.229 43.478 0.00 0.00 0.00 3.95
2939 3467 5.874810 TGAAGGATTGAAGTATCGACAAAGG 59.125 40.000 0.00 0.00 0.00 3.11
2940 3468 6.036517 CCTGAAGGATTGAAGTATCGACAAAG 59.963 42.308 0.00 0.00 37.39 2.77
2941 3469 5.874810 CCTGAAGGATTGAAGTATCGACAAA 59.125 40.000 0.00 0.00 37.39 2.83
2942 3470 5.046591 ACCTGAAGGATTGAAGTATCGACAA 60.047 40.000 2.62 0.00 38.94 3.18
2943 3471 4.466370 ACCTGAAGGATTGAAGTATCGACA 59.534 41.667 2.62 0.00 38.94 4.35
2944 3472 5.012328 ACCTGAAGGATTGAAGTATCGAC 57.988 43.478 2.62 0.00 38.94 4.20
2945 3473 4.956700 AGACCTGAAGGATTGAAGTATCGA 59.043 41.667 2.62 0.00 38.94 3.59
2946 3474 5.068460 AGAGACCTGAAGGATTGAAGTATCG 59.932 44.000 2.62 0.00 38.94 2.92
2947 3475 6.323739 AGAGAGACCTGAAGGATTGAAGTATC 59.676 42.308 2.62 0.00 38.94 2.24
2948 3476 6.201591 AGAGAGACCTGAAGGATTGAAGTAT 58.798 40.000 2.62 0.00 38.94 2.12
2949 3477 5.584913 AGAGAGACCTGAAGGATTGAAGTA 58.415 41.667 2.62 0.00 38.94 2.24
2950 3478 4.424842 AGAGAGACCTGAAGGATTGAAGT 58.575 43.478 2.62 0.00 38.94 3.01
2951 3479 5.419239 AAGAGAGACCTGAAGGATTGAAG 57.581 43.478 2.62 0.00 38.94 3.02
2952 3480 6.572509 CGTTAAGAGAGACCTGAAGGATTGAA 60.573 42.308 2.62 0.00 38.94 2.69
2953 3481 5.105716 CGTTAAGAGAGACCTGAAGGATTGA 60.106 44.000 2.62 0.00 38.94 2.57
2954 3482 5.105752 CGTTAAGAGAGACCTGAAGGATTG 58.894 45.833 2.62 0.00 38.94 2.67
2955 3483 4.160626 CCGTTAAGAGAGACCTGAAGGATT 59.839 45.833 2.62 0.00 38.94 3.01
2956 3484 3.702045 CCGTTAAGAGAGACCTGAAGGAT 59.298 47.826 2.62 0.00 38.94 3.24
2957 3485 3.090037 CCGTTAAGAGAGACCTGAAGGA 58.910 50.000 2.62 0.00 38.94 3.36
2958 3486 3.090037 TCCGTTAAGAGAGACCTGAAGG 58.910 50.000 0.00 0.00 42.17 3.46
2959 3487 3.759618 AGTCCGTTAAGAGAGACCTGAAG 59.240 47.826 0.00 0.00 0.00 3.02
2960 3488 3.757493 GAGTCCGTTAAGAGAGACCTGAA 59.243 47.826 0.00 0.00 0.00 3.02
2961 3489 3.345414 GAGTCCGTTAAGAGAGACCTGA 58.655 50.000 0.00 0.00 0.00 3.86
2962 3490 2.424246 GGAGTCCGTTAAGAGAGACCTG 59.576 54.545 0.00 0.00 0.00 4.00
2963 3491 2.309458 AGGAGTCCGTTAAGAGAGACCT 59.691 50.000 2.76 0.00 0.00 3.85
2964 3492 2.684374 GAGGAGTCCGTTAAGAGAGACC 59.316 54.545 2.76 0.00 0.00 3.85
2965 3493 2.684374 GGAGGAGTCCGTTAAGAGAGAC 59.316 54.545 2.76 0.00 31.37 3.36
2966 3494 2.356947 GGGAGGAGTCCGTTAAGAGAGA 60.357 54.545 2.76 0.00 45.05 3.10
2967 3495 2.025898 GGGAGGAGTCCGTTAAGAGAG 58.974 57.143 2.76 0.00 45.05 3.20
2968 3496 1.356738 TGGGAGGAGTCCGTTAAGAGA 59.643 52.381 2.76 0.00 45.05 3.10
2969 3497 1.848652 TGGGAGGAGTCCGTTAAGAG 58.151 55.000 2.76 0.00 45.05 2.85
2970 3498 2.108168 CATGGGAGGAGTCCGTTAAGA 58.892 52.381 2.76 0.00 45.05 2.10
2971 3499 1.831736 ACATGGGAGGAGTCCGTTAAG 59.168 52.381 2.76 0.00 45.05 1.85
2972 3500 1.829222 GACATGGGAGGAGTCCGTTAA 59.171 52.381 2.76 0.00 45.05 2.01
2973 3501 1.272816 TGACATGGGAGGAGTCCGTTA 60.273 52.381 2.76 0.00 45.05 3.18
2974 3502 0.544357 TGACATGGGAGGAGTCCGTT 60.544 55.000 2.76 0.00 45.05 4.44
2975 3503 0.544357 TTGACATGGGAGGAGTCCGT 60.544 55.000 2.76 0.00 45.05 4.69
2976 3504 0.613260 TTTGACATGGGAGGAGTCCG 59.387 55.000 2.76 0.00 45.05 4.79
2977 3505 3.282885 GAATTTGACATGGGAGGAGTCC 58.717 50.000 0.00 0.00 43.05 3.85
2978 3506 2.939103 CGAATTTGACATGGGAGGAGTC 59.061 50.000 0.00 0.00 0.00 3.36
2979 3507 2.356125 CCGAATTTGACATGGGAGGAGT 60.356 50.000 0.00 0.00 0.00 3.85
2980 3508 2.292267 CCGAATTTGACATGGGAGGAG 58.708 52.381 0.00 0.00 0.00 3.69
2981 3509 1.633432 ACCGAATTTGACATGGGAGGA 59.367 47.619 0.00 0.00 0.00 3.71
2982 3510 2.017049 GACCGAATTTGACATGGGAGG 58.983 52.381 0.00 0.00 0.00 4.30
2983 3511 1.665679 CGACCGAATTTGACATGGGAG 59.334 52.381 0.00 0.00 0.00 4.30
2984 3512 1.276705 TCGACCGAATTTGACATGGGA 59.723 47.619 0.00 0.00 0.00 4.37
2985 3513 1.396996 GTCGACCGAATTTGACATGGG 59.603 52.381 3.51 0.00 0.00 4.00
2986 3514 1.396996 GGTCGACCGAATTTGACATGG 59.603 52.381 20.85 0.00 33.04 3.66
2987 3515 1.396996 GGGTCGACCGAATTTGACATG 59.603 52.381 27.68 0.00 36.71 3.21
2988 3516 1.677820 GGGGTCGACCGAATTTGACAT 60.678 52.381 27.68 0.00 41.60 3.06
2989 3517 0.320946 GGGGTCGACCGAATTTGACA 60.321 55.000 27.68 0.00 41.60 3.58
2990 3518 2.463592 GGGGTCGACCGAATTTGAC 58.536 57.895 27.68 11.35 41.60 3.18
3001 3529 4.377760 AAGAGAGGGCGGGGTCGA 62.378 66.667 0.00 0.00 39.00 4.20
3002 3530 4.148825 CAAGAGAGGGCGGGGTCG 62.149 72.222 0.00 0.00 39.81 4.79
3003 3531 3.787001 CCAAGAGAGGGCGGGGTC 61.787 72.222 0.00 0.00 0.00 4.46
3004 3532 2.547123 ATACCAAGAGAGGGCGGGGT 62.547 60.000 0.00 0.00 0.00 4.95
3005 3533 0.471211 TATACCAAGAGAGGGCGGGG 60.471 60.000 0.00 0.00 0.00 5.73
3006 3534 0.969894 CTATACCAAGAGAGGGCGGG 59.030 60.000 0.00 0.00 0.00 6.13
3007 3535 1.996798 TCTATACCAAGAGAGGGCGG 58.003 55.000 0.00 0.00 0.00 6.13
3008 3536 3.574396 TCATTCTATACCAAGAGAGGGCG 59.426 47.826 0.00 0.00 0.00 6.13
3009 3537 4.562552 GCTCATTCTATACCAAGAGAGGGC 60.563 50.000 0.00 0.00 0.00 5.19
3010 3538 4.020662 GGCTCATTCTATACCAAGAGAGGG 60.021 50.000 0.00 0.00 0.00 4.30
3011 3539 4.321601 CGGCTCATTCTATACCAAGAGAGG 60.322 50.000 0.00 0.00 0.00 3.69
3012 3540 4.279671 ACGGCTCATTCTATACCAAGAGAG 59.720 45.833 0.00 0.00 0.00 3.20
3013 3541 4.038042 CACGGCTCATTCTATACCAAGAGA 59.962 45.833 0.00 0.00 0.00 3.10
3014 3542 4.038042 TCACGGCTCATTCTATACCAAGAG 59.962 45.833 0.00 0.00 0.00 2.85
3015 3543 3.958147 TCACGGCTCATTCTATACCAAGA 59.042 43.478 0.00 0.00 0.00 3.02
3016 3544 4.322080 TCACGGCTCATTCTATACCAAG 57.678 45.455 0.00 0.00 0.00 3.61
3017 3545 4.746535 TTCACGGCTCATTCTATACCAA 57.253 40.909 0.00 0.00 0.00 3.67
3018 3546 4.746535 TTTCACGGCTCATTCTATACCA 57.253 40.909 0.00 0.00 0.00 3.25
3054 3585 5.349817 AGCATGAAAGAGATACACTTGAACG 59.650 40.000 0.00 0.00 0.00 3.95
3065 3596 3.053842 ACCATCACCAGCATGAAAGAGAT 60.054 43.478 0.00 0.00 39.69 2.75
3069 3600 2.422479 CTCACCATCACCAGCATGAAAG 59.578 50.000 0.00 0.00 39.69 2.62
3079 3610 5.665916 AAATTCCAAATCTCACCATCACC 57.334 39.130 0.00 0.00 0.00 4.02
3091 3622 7.836183 AGAGCACCTGTATCTTAAATTCCAAAT 59.164 33.333 0.00 0.00 0.00 2.32
3108 3673 0.244721 TCGTGACATCAGAGCACCTG 59.755 55.000 0.22 0.22 44.27 4.00
3124 3696 5.556915 TGACTCCAAACCTTGATAAATCGT 58.443 37.500 0.00 0.00 0.00 3.73
3132 3704 1.072331 GAGGCTGACTCCAAACCTTGA 59.928 52.381 0.00 0.00 40.49 3.02
3142 3714 0.036022 AAAGCAGGTGAGGCTGACTC 59.964 55.000 2.79 2.79 46.78 3.36
3161 3733 2.602878 GACGTCCAGAAGTTTATCGCA 58.397 47.619 3.51 0.00 0.00 5.10
3248 3820 1.398692 TGTTTCCAAGGTTGCCTGAC 58.601 50.000 0.00 0.00 32.13 3.51
3254 3826 2.544486 GCTCTGCTTGTTTCCAAGGTTG 60.544 50.000 4.76 0.00 46.72 3.77
3295 3867 6.183360 TGGATTTCTTTTGTCTGGTGTTTCTC 60.183 38.462 0.00 0.00 0.00 2.87
3303 3875 5.275067 TGGTTTGGATTTCTTTTGTCTGG 57.725 39.130 0.00 0.00 0.00 3.86
3316 3889 1.260544 GCAGCCTTCTTGGTTTGGAT 58.739 50.000 0.00 0.00 38.35 3.41
3337 3910 7.435192 AGCGGCTTTTGAGTATAAAATAATTGC 59.565 33.333 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.