Multiple sequence alignment - TraesCS4B01G267700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G267700 chr4B 100.000 3823 0 0 1 3823 541362317 541366139 0.000000e+00 7060
1 TraesCS4B01G267700 chr4D 92.147 2687 109 42 148 2785 437949794 437952427 0.000000e+00 3699
2 TraesCS4B01G267700 chr4D 95.506 445 14 6 2821 3260 437952427 437952870 0.000000e+00 706
3 TraesCS4B01G267700 chr4D 92.437 238 10 3 3266 3496 437952971 437953207 2.200000e-87 333
4 TraesCS4B01G267700 chr4D 88.288 111 5 1 1 111 437949694 437949796 4.010000e-25 126
5 TraesCS4B01G267700 chr4A 94.545 1100 48 8 1696 2785 30149286 30148189 0.000000e+00 1688
6 TraesCS4B01G267700 chr4A 88.243 1446 93 35 244 1646 30150703 30149292 0.000000e+00 1657
7 TraesCS4B01G267700 chr4A 89.223 399 19 11 2830 3213 30148176 30147787 9.610000e-131 477
8 TraesCS4B01G267700 chr4A 88.546 227 18 4 3273 3496 30147780 30147559 6.300000e-68 268
9 TraesCS4B01G267700 chr5B 96.951 328 1 3 3496 3823 41959540 41959222 3.360000e-150 542
10 TraesCS4B01G267700 chr7A 96.942 327 0 3 3497 3823 466867882 466867566 1.210000e-149 540
11 TraesCS4B01G267700 chr7A 88.430 121 13 1 3547 3666 689076316 689076436 1.110000e-30 145


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G267700 chr4B 541362317 541366139 3822 False 7060.0 7060 100.00000 1 3823 1 chr4B.!!$F1 3822
1 TraesCS4B01G267700 chr4D 437949694 437953207 3513 False 1216.0 3699 92.09450 1 3496 4 chr4D.!!$F1 3495
2 TraesCS4B01G267700 chr4A 30147559 30150703 3144 True 1022.5 1688 90.13925 244 3496 4 chr4A.!!$R1 3252

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
161 162 0.106015 TCCCTCTCATCATCCGCTCA 60.106 55.0 0.00 0.00 0.00 4.26 F
952 986 0.240945 GCCGTAGTTGCATTGCAGTT 59.759 50.0 11.76 6.80 40.61 3.16 F
1433 1488 1.063031 GGTCGTTTACTGTACACGCC 58.937 55.0 18.73 18.02 33.85 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1409 1464 0.038343 GTACAGTAAACGACCCGGCA 60.038 55.0 0.00 0.00 0.00 5.69 R
1963 2035 0.669318 CTAGCGTTTGAGCCGTTGGA 60.669 55.0 0.00 0.00 38.01 3.53 R
3023 3121 0.034186 CCTGCCATGGCTAAAGACCA 60.034 55.0 35.53 13.44 42.61 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 2.549754 CCGTCTGCAGAAACAACAATCT 59.450 45.455 20.19 0.00 0.00 2.40
74 75 0.250901 ACAACAATCTGCCGAAGCCT 60.251 50.000 0.00 0.00 38.69 4.58
75 76 0.449388 CAACAATCTGCCGAAGCCTC 59.551 55.000 0.00 0.00 38.69 4.70
76 77 0.678048 AACAATCTGCCGAAGCCTCC 60.678 55.000 0.00 0.00 38.69 4.30
77 78 1.821332 CAATCTGCCGAAGCCTCCC 60.821 63.158 0.00 0.00 38.69 4.30
78 79 3.391665 AATCTGCCGAAGCCTCCCG 62.392 63.158 0.00 0.00 38.69 5.14
111 112 3.250280 CCATCAAATCAGATCCAAGCTCG 59.750 47.826 0.00 0.00 0.00 5.03
112 113 2.283298 TCAAATCAGATCCAAGCTCGC 58.717 47.619 0.00 0.00 0.00 5.03
113 114 1.004185 CAAATCAGATCCAAGCTCGCG 60.004 52.381 0.00 0.00 0.00 5.87
115 116 3.624300 CAGATCCAAGCTCGCGCG 61.624 66.667 26.76 26.76 42.32 6.86
134 135 2.744709 GCCGGGTAGCTCGCAAAA 60.745 61.111 2.18 0.00 0.00 2.44
135 136 2.112815 GCCGGGTAGCTCGCAAAAT 61.113 57.895 2.18 0.00 0.00 1.82
136 137 2.014594 CCGGGTAGCTCGCAAAATC 58.985 57.895 0.00 0.00 0.00 2.17
137 138 0.462047 CCGGGTAGCTCGCAAAATCT 60.462 55.000 0.00 0.00 0.00 2.40
138 139 0.652592 CGGGTAGCTCGCAAAATCTG 59.347 55.000 0.00 0.00 0.00 2.90
152 153 5.184340 CAAAATCTGCAATCCCTCTCATC 57.816 43.478 0.00 0.00 0.00 2.92
153 154 4.515028 AAATCTGCAATCCCTCTCATCA 57.485 40.909 0.00 0.00 0.00 3.07
154 155 4.726035 AATCTGCAATCCCTCTCATCAT 57.274 40.909 0.00 0.00 0.00 2.45
155 156 3.766068 TCTGCAATCCCTCTCATCATC 57.234 47.619 0.00 0.00 0.00 2.92
156 157 2.371179 TCTGCAATCCCTCTCATCATCC 59.629 50.000 0.00 0.00 0.00 3.51
157 158 1.071228 TGCAATCCCTCTCATCATCCG 59.929 52.381 0.00 0.00 0.00 4.18
158 159 1.805869 CAATCCCTCTCATCATCCGC 58.194 55.000 0.00 0.00 0.00 5.54
159 160 1.347050 CAATCCCTCTCATCATCCGCT 59.653 52.381 0.00 0.00 0.00 5.52
160 161 1.265236 ATCCCTCTCATCATCCGCTC 58.735 55.000 0.00 0.00 0.00 5.03
161 162 0.106015 TCCCTCTCATCATCCGCTCA 60.106 55.000 0.00 0.00 0.00 4.26
162 163 0.755079 CCCTCTCATCATCCGCTCAA 59.245 55.000 0.00 0.00 0.00 3.02
224 225 0.316841 CAATGACCCAAACCCAACCG 59.683 55.000 0.00 0.00 0.00 4.44
405 414 1.583054 GCTGCCCAAAGTCTATACGG 58.417 55.000 0.00 0.00 0.00 4.02
595 608 2.436646 GGGTGGCACTGATGGACG 60.437 66.667 18.45 0.00 0.00 4.79
598 611 2.927856 TGGCACTGATGGACGGGT 60.928 61.111 0.00 0.00 0.00 5.28
664 680 0.800631 CACGTAGCAGTGACGACCTA 59.199 55.000 10.96 0.00 44.43 3.08
688 710 4.404394 TGTGTGTGTAAAGAGGAGTGAGAA 59.596 41.667 0.00 0.00 0.00 2.87
707 729 4.039092 AGTGGAGCATGGGCGCTT 62.039 61.111 7.64 0.00 44.01 4.68
729 751 1.416772 GTACTAGGATGTTCCAGCCCC 59.583 57.143 0.00 0.00 41.38 5.80
730 752 0.253160 ACTAGGATGTTCCAGCCCCA 60.253 55.000 0.00 0.00 41.38 4.96
767 798 4.442612 GGCCGATCATAGTAGCATGATGAT 60.443 45.833 6.55 6.55 43.97 2.45
773 804 6.278172 TCATAGTAGCATGATGATGACCTC 57.722 41.667 0.00 0.00 29.93 3.85
774 805 5.776716 TCATAGTAGCATGATGATGACCTCA 59.223 40.000 0.00 0.00 38.53 3.86
775 806 6.268387 TCATAGTAGCATGATGATGACCTCAA 59.732 38.462 0.00 0.00 37.44 3.02
776 807 4.958509 AGTAGCATGATGATGACCTCAAG 58.041 43.478 0.00 0.00 37.44 3.02
777 808 3.928005 AGCATGATGATGACCTCAAGT 57.072 42.857 0.00 0.00 37.44 3.16
778 809 3.806380 AGCATGATGATGACCTCAAGTC 58.194 45.455 0.00 0.00 46.51 3.01
779 810 2.877168 GCATGATGATGACCTCAAGTCC 59.123 50.000 0.00 0.00 45.68 3.85
780 811 3.433314 GCATGATGATGACCTCAAGTCCT 60.433 47.826 0.00 0.00 45.68 3.85
824 855 5.007823 GCTCGTTGCATAGTCTTCTCTAGTA 59.992 44.000 0.00 0.00 42.31 1.82
949 983 2.339556 GGGCCGTAGTTGCATTGCA 61.340 57.895 7.38 7.38 36.47 4.08
952 986 0.240945 GCCGTAGTTGCATTGCAGTT 59.759 50.000 11.76 6.80 40.61 3.16
1287 1335 1.433534 CTCTGCGTTCCTGGTCTTTC 58.566 55.000 0.00 0.00 0.00 2.62
1294 1342 2.221055 CGTTCCTGGTCTTTCGTTTCTG 59.779 50.000 0.00 0.00 0.00 3.02
1324 1375 2.140717 GATCGACGGTCCACTTTTGTT 58.859 47.619 1.91 0.00 0.00 2.83
1327 1378 1.385528 GACGGTCCACTTTTGTTGGT 58.614 50.000 0.00 0.00 0.00 3.67
1350 1401 3.005554 CGAAGATGTGATGGACAAGCTT 58.994 45.455 0.00 0.00 38.36 3.74
1409 1464 1.348036 GTGGTCTTGCAAGAGGTAGGT 59.652 52.381 29.13 0.00 35.32 3.08
1415 1470 2.584608 CAAGAGGTAGGTGCCGGG 59.415 66.667 2.18 0.00 0.00 5.73
1433 1488 1.063031 GGTCGTTTACTGTACACGCC 58.937 55.000 18.73 18.02 33.85 5.68
1483 1544 4.694509 TCATGGTTTTGCATTTGTATTGCC 59.305 37.500 0.00 0.00 39.39 4.52
1711 1773 4.700268 ATCATGACGCATGTAAAGCAAA 57.300 36.364 16.01 0.01 41.98 3.68
1839 1906 1.279496 CCTCTCTGTCCCCATTGTCA 58.721 55.000 0.00 0.00 0.00 3.58
1840 1907 1.209019 CCTCTCTGTCCCCATTGTCAG 59.791 57.143 0.00 0.00 0.00 3.51
1853 1920 4.549458 CCATTGTCAGCTCGTTTTCAAAT 58.451 39.130 0.00 0.00 0.00 2.32
1963 2035 4.209288 CGAAAGTCGCGAGGAATTTATCAT 59.791 41.667 10.24 0.00 42.51 2.45
2045 2118 2.032681 GGTGGCGCCAGAAGTCTT 59.967 61.111 33.73 0.00 37.17 3.01
2092 2165 9.932207 TCTGAAGTAAAACCTGAATTTATACGA 57.068 29.630 0.00 0.00 0.00 3.43
2100 2173 5.741011 ACCTGAATTTATACGAGGCAGAAA 58.259 37.500 0.00 0.00 0.00 2.52
2195 2278 3.986006 GTGACGGACAGGTCGCCA 61.986 66.667 0.00 0.00 40.64 5.69
2245 2328 3.716006 CAAGCAGCACGTGGACGG 61.716 66.667 18.88 3.20 44.95 4.79
2288 2371 3.441290 CCCGAGGACGACGAGCTT 61.441 66.667 0.00 0.00 42.66 3.74
2627 2710 1.777030 CGGAGGATGACGACGAGGAG 61.777 65.000 0.00 0.00 0.00 3.69
2628 2711 1.448922 GGAGGATGACGACGAGGAGG 61.449 65.000 0.00 0.00 0.00 4.30
2629 2712 0.464013 GAGGATGACGACGAGGAGGA 60.464 60.000 0.00 0.00 0.00 3.71
2756 2842 2.734673 GCCTGCTTCGTCGCTCAAG 61.735 63.158 0.00 0.00 0.00 3.02
2785 2871 0.037303 TCGTACACCGAGGAGAGGTT 59.963 55.000 0.00 0.00 41.60 3.50
2786 2872 0.170561 CGTACACCGAGGAGAGGTTG 59.829 60.000 0.00 0.00 40.59 3.77
2787 2873 0.108756 GTACACCGAGGAGAGGTTGC 60.109 60.000 0.00 0.00 40.59 4.17
2788 2874 0.541063 TACACCGAGGAGAGGTTGCA 60.541 55.000 0.00 0.00 40.59 4.08
2789 2875 1.194781 ACACCGAGGAGAGGTTGCAT 61.195 55.000 0.00 0.00 40.59 3.96
2790 2876 0.742281 CACCGAGGAGAGGTTGCATG 60.742 60.000 0.00 0.00 40.59 4.06
2791 2877 1.817099 CCGAGGAGAGGTTGCATGC 60.817 63.158 11.82 11.82 0.00 4.06
2792 2878 1.817099 CGAGGAGAGGTTGCATGCC 60.817 63.158 16.68 0.00 0.00 4.40
2793 2879 1.300963 GAGGAGAGGTTGCATGCCA 59.699 57.895 16.68 0.00 0.00 4.92
2794 2880 0.106819 GAGGAGAGGTTGCATGCCAT 60.107 55.000 16.68 0.00 0.00 4.40
2795 2881 1.141657 GAGGAGAGGTTGCATGCCATA 59.858 52.381 16.68 0.00 0.00 2.74
2796 2882 1.565759 AGGAGAGGTTGCATGCCATAA 59.434 47.619 16.68 0.00 0.00 1.90
2797 2883 2.176364 AGGAGAGGTTGCATGCCATAAT 59.824 45.455 16.68 0.00 0.00 1.28
2798 2884 3.395607 AGGAGAGGTTGCATGCCATAATA 59.604 43.478 16.68 0.00 0.00 0.98
2799 2885 4.141181 AGGAGAGGTTGCATGCCATAATAA 60.141 41.667 16.68 0.00 0.00 1.40
2800 2886 4.584325 GGAGAGGTTGCATGCCATAATAAA 59.416 41.667 16.68 0.00 0.00 1.40
2801 2887 5.068987 GGAGAGGTTGCATGCCATAATAAAA 59.931 40.000 16.68 0.00 0.00 1.52
2802 2888 6.406849 GGAGAGGTTGCATGCCATAATAAAAA 60.407 38.462 16.68 0.00 0.00 1.94
2803 2889 6.340522 AGAGGTTGCATGCCATAATAAAAAC 58.659 36.000 16.68 9.12 0.00 2.43
2804 2890 6.155049 AGAGGTTGCATGCCATAATAAAAACT 59.845 34.615 16.68 7.86 0.00 2.66
2805 2891 6.710278 AGGTTGCATGCCATAATAAAAACTT 58.290 32.000 16.68 2.87 0.00 2.66
2806 2892 7.167535 AGGTTGCATGCCATAATAAAAACTTT 58.832 30.769 16.68 0.18 0.00 2.66
2807 2893 7.665145 AGGTTGCATGCCATAATAAAAACTTTT 59.335 29.630 16.68 0.00 0.00 2.27
2808 2894 7.750014 GGTTGCATGCCATAATAAAAACTTTTG 59.250 33.333 16.68 0.00 0.00 2.44
2809 2895 6.840075 TGCATGCCATAATAAAAACTTTTGC 58.160 32.000 16.68 0.00 0.00 3.68
2810 2896 6.429078 TGCATGCCATAATAAAAACTTTTGCA 59.571 30.769 16.68 0.00 0.00 4.08
2811 2897 7.040892 TGCATGCCATAATAAAAACTTTTGCAA 60.041 29.630 16.68 0.00 29.52 4.08
2812 2898 7.806960 GCATGCCATAATAAAAACTTTTGCAAA 59.193 29.630 8.05 8.05 29.52 3.68
2813 2899 9.674824 CATGCCATAATAAAAACTTTTGCAAAA 57.325 25.926 22.61 22.61 29.52 2.44
2815 2901 9.508567 TGCCATAATAAAAACTTTTGCAAAAAC 57.491 25.926 23.92 0.00 0.00 2.43
2816 2902 8.963130 GCCATAATAAAAACTTTTGCAAAAACC 58.037 29.630 23.92 0.00 0.00 3.27
2817 2903 9.163903 CCATAATAAAAACTTTTGCAAAAACCG 57.836 29.630 23.92 15.47 0.00 4.44
2818 2904 9.922305 CATAATAAAAACTTTTGCAAAAACCGA 57.078 25.926 23.92 9.17 0.00 4.69
2844 2934 0.103572 AGCTTTGCTTGCAACCACTG 59.896 50.000 7.60 0.00 33.89 3.66
3035 3133 1.418637 ACGAGGTTTGGTCTTTAGCCA 59.581 47.619 0.00 0.00 0.00 4.75
3093 3191 4.449743 CGTCCTTCGTCCTGTAAAAATGAA 59.550 41.667 0.00 0.00 34.52 2.57
3260 3366 4.397832 TTGCCGGGCGGGAAGTAC 62.398 66.667 16.19 0.00 40.69 2.73
3263 3369 3.140141 CCGGGCGGGAAGTACGTA 61.140 66.667 4.88 0.00 38.47 3.57
3264 3370 2.102946 CGGGCGGGAAGTACGTAC 59.897 66.667 18.10 18.10 0.00 3.67
3334 3538 1.011333 GTGTGGTGCACTGTACGTTT 58.989 50.000 17.98 0.00 44.41 3.60
3337 3541 2.159071 TGTGGTGCACTGTACGTTTAGT 60.159 45.455 17.98 0.00 35.11 2.24
3340 3544 2.388121 GTGCACTGTACGTTTAGTCGT 58.612 47.619 10.32 0.00 45.97 4.34
3500 3711 2.725490 CAGACATGCTACTAGCGAGTG 58.275 52.381 10.02 7.76 46.26 3.51
3501 3712 1.066303 AGACATGCTACTAGCGAGTGC 59.934 52.381 10.02 11.32 46.26 4.40
3502 3713 0.817654 ACATGCTACTAGCGAGTGCA 59.182 50.000 19.92 19.92 46.26 4.57
3503 3714 1.410517 ACATGCTACTAGCGAGTGCAT 59.589 47.619 21.78 21.78 46.26 3.96
3504 3715 2.623416 ACATGCTACTAGCGAGTGCATA 59.377 45.455 24.64 9.03 46.26 3.14
3505 3716 3.256879 ACATGCTACTAGCGAGTGCATAT 59.743 43.478 24.64 17.20 46.26 1.78
3506 3717 3.560902 TGCTACTAGCGAGTGCATATC 57.439 47.619 10.02 0.00 46.26 1.63
3507 3718 3.149981 TGCTACTAGCGAGTGCATATCT 58.850 45.455 10.02 0.00 46.26 1.98
3508 3719 3.057946 TGCTACTAGCGAGTGCATATCTG 60.058 47.826 10.02 0.00 46.26 2.90
3509 3720 3.671971 GCTACTAGCGAGTGCATATCTGG 60.672 52.174 10.02 0.00 46.23 3.86
3510 3721 2.311463 ACTAGCGAGTGCATATCTGGT 58.689 47.619 0.00 0.00 46.23 4.00
3511 3722 2.035193 ACTAGCGAGTGCATATCTGGTG 59.965 50.000 0.00 0.00 46.23 4.17
3512 3723 0.531532 AGCGAGTGCATATCTGGTGC 60.532 55.000 0.00 0.00 46.23 5.01
3513 3724 0.531532 GCGAGTGCATATCTGGTGCT 60.532 55.000 0.00 0.00 42.92 4.40
3514 3725 1.269778 GCGAGTGCATATCTGGTGCTA 60.270 52.381 0.00 0.00 42.92 3.49
3515 3726 2.398498 CGAGTGCATATCTGGTGCTAC 58.602 52.381 0.00 0.00 42.92 3.58
3516 3727 2.398498 GAGTGCATATCTGGTGCTACG 58.602 52.381 0.00 0.00 42.92 3.51
3517 3728 1.069204 AGTGCATATCTGGTGCTACGG 59.931 52.381 0.00 0.00 42.92 4.02
3518 3729 0.249868 TGCATATCTGGTGCTACGGC 60.250 55.000 0.00 0.00 42.92 5.68
3519 3730 0.034059 GCATATCTGGTGCTACGGCT 59.966 55.000 0.00 0.00 39.45 5.52
3520 3731 1.937108 GCATATCTGGTGCTACGGCTC 60.937 57.143 0.00 0.00 39.45 4.70
3521 3732 1.341209 CATATCTGGTGCTACGGCTCA 59.659 52.381 0.00 0.00 39.59 4.26
3522 3733 1.032794 TATCTGGTGCTACGGCTCAG 58.967 55.000 0.00 0.00 39.64 3.35
3523 3734 0.684479 ATCTGGTGCTACGGCTCAGA 60.684 55.000 13.25 13.25 45.24 3.27
3524 3735 1.140589 CTGGTGCTACGGCTCAGAG 59.859 63.158 0.00 0.00 40.19 3.35
3525 3736 1.599606 CTGGTGCTACGGCTCAGAGT 61.600 60.000 0.00 0.00 40.19 3.24
3526 3737 0.323087 TGGTGCTACGGCTCAGAGTA 60.323 55.000 0.00 0.00 39.59 2.59
3527 3738 1.033574 GGTGCTACGGCTCAGAGTAT 58.966 55.000 0.00 0.00 39.59 2.12
3528 3739 1.269309 GGTGCTACGGCTCAGAGTATG 60.269 57.143 0.00 0.00 39.59 2.39
3529 3740 0.385751 TGCTACGGCTCAGAGTATGC 59.614 55.000 0.00 0.00 39.59 3.14
3530 3741 0.671251 GCTACGGCTCAGAGTATGCT 59.329 55.000 0.00 0.00 35.22 3.79
3531 3742 1.880675 GCTACGGCTCAGAGTATGCTA 59.119 52.381 0.00 0.00 35.22 3.49
3532 3743 2.350964 GCTACGGCTCAGAGTATGCTAC 60.351 54.545 0.00 0.00 35.22 3.58
3533 3744 0.663688 ACGGCTCAGAGTATGCTACG 59.336 55.000 0.00 0.00 0.00 3.51
3534 3745 0.661780 CGGCTCAGAGTATGCTACGC 60.662 60.000 0.00 0.00 0.00 4.42
3535 3746 0.671251 GGCTCAGAGTATGCTACGCT 59.329 55.000 0.00 0.00 39.47 5.07
3538 3749 3.955291 CAGAGTATGCTACGCTGCT 57.045 52.632 11.74 0.00 46.58 4.24
3539 3750 1.764851 CAGAGTATGCTACGCTGCTC 58.235 55.000 11.74 0.00 46.58 4.26
3540 3751 0.671251 AGAGTATGCTACGCTGCTCC 59.329 55.000 0.00 0.00 37.44 4.70
3541 3752 0.661780 GAGTATGCTACGCTGCTCCG 60.662 60.000 0.00 0.00 0.00 4.63
3542 3753 1.101635 AGTATGCTACGCTGCTCCGA 61.102 55.000 0.00 0.00 0.00 4.55
3543 3754 0.661780 GTATGCTACGCTGCTCCGAG 60.662 60.000 0.00 0.00 0.00 4.63
3544 3755 0.818040 TATGCTACGCTGCTCCGAGA 60.818 55.000 0.00 0.00 0.00 4.04
3545 3756 2.278271 GCTACGCTGCTCCGAGAC 60.278 66.667 0.00 0.00 0.00 3.36
3546 3757 2.409651 CTACGCTGCTCCGAGACC 59.590 66.667 0.00 0.00 0.00 3.85
3547 3758 2.045242 TACGCTGCTCCGAGACCT 60.045 61.111 0.00 0.00 0.00 3.85
3548 3759 2.054140 CTACGCTGCTCCGAGACCTC 62.054 65.000 0.00 0.00 0.00 3.85
3549 3760 4.200283 CGCTGCTCCGAGACCTCC 62.200 72.222 0.00 0.00 0.00 4.30
3550 3761 4.200283 GCTGCTCCGAGACCTCCG 62.200 72.222 0.00 0.00 0.00 4.63
3551 3762 2.438614 CTGCTCCGAGACCTCCGA 60.439 66.667 0.00 0.00 0.00 4.55
3552 3763 2.438614 TGCTCCGAGACCTCCGAG 60.439 66.667 0.00 9.88 37.78 4.63
3553 3764 2.124653 GCTCCGAGACCTCCGAGA 60.125 66.667 16.00 0.85 37.20 4.04
3554 3765 2.474612 GCTCCGAGACCTCCGAGAC 61.475 68.421 16.00 6.75 37.20 3.36
3555 3766 1.078356 CTCCGAGACCTCCGAGACA 60.078 63.158 8.93 0.00 37.20 3.41
3556 3767 1.078356 TCCGAGACCTCCGAGACAG 60.078 63.158 0.00 0.00 0.00 3.51
3557 3768 1.377463 CCGAGACCTCCGAGACAGT 60.377 63.158 0.00 0.00 0.00 3.55
3558 3769 0.961358 CCGAGACCTCCGAGACAGTT 60.961 60.000 0.00 0.00 0.00 3.16
3559 3770 0.882474 CGAGACCTCCGAGACAGTTT 59.118 55.000 0.00 0.00 0.00 2.66
3560 3771 2.082231 CGAGACCTCCGAGACAGTTTA 58.918 52.381 0.00 0.00 0.00 2.01
3561 3772 2.096174 CGAGACCTCCGAGACAGTTTAG 59.904 54.545 0.00 0.00 0.00 1.85
3562 3773 3.083293 GAGACCTCCGAGACAGTTTAGT 58.917 50.000 0.00 0.00 0.00 2.24
3563 3774 2.820787 AGACCTCCGAGACAGTTTAGTG 59.179 50.000 0.00 0.00 0.00 2.74
3564 3775 1.272769 ACCTCCGAGACAGTTTAGTGC 59.727 52.381 0.00 0.00 0.00 4.40
3565 3776 1.618861 CTCCGAGACAGTTTAGTGCG 58.381 55.000 0.00 0.00 0.00 5.34
3566 3777 0.956633 TCCGAGACAGTTTAGTGCGT 59.043 50.000 0.00 0.00 0.00 5.24
3567 3778 1.338973 TCCGAGACAGTTTAGTGCGTT 59.661 47.619 0.00 0.00 0.00 4.84
3568 3779 1.455786 CCGAGACAGTTTAGTGCGTTG 59.544 52.381 0.00 0.00 0.00 4.10
3569 3780 1.455786 CGAGACAGTTTAGTGCGTTGG 59.544 52.381 0.00 0.00 0.00 3.77
3570 3781 2.750948 GAGACAGTTTAGTGCGTTGGA 58.249 47.619 0.00 0.00 0.00 3.53
3571 3782 3.326747 GAGACAGTTTAGTGCGTTGGAT 58.673 45.455 0.00 0.00 0.00 3.41
3572 3783 3.326747 AGACAGTTTAGTGCGTTGGATC 58.673 45.455 0.00 0.00 0.00 3.36
3573 3784 2.066262 ACAGTTTAGTGCGTTGGATCG 58.934 47.619 0.00 0.00 0.00 3.69
3574 3785 1.393539 CAGTTTAGTGCGTTGGATCGG 59.606 52.381 0.00 0.00 0.00 4.18
3575 3786 1.274167 AGTTTAGTGCGTTGGATCGGA 59.726 47.619 0.00 0.00 0.00 4.55
3576 3787 2.093658 AGTTTAGTGCGTTGGATCGGAT 60.094 45.455 0.00 0.00 33.36 4.18
3577 3788 2.676342 GTTTAGTGCGTTGGATCGGATT 59.324 45.455 0.00 0.00 33.36 3.01
3578 3789 1.934589 TAGTGCGTTGGATCGGATTG 58.065 50.000 0.00 0.00 33.36 2.67
3579 3790 0.036388 AGTGCGTTGGATCGGATTGT 60.036 50.000 0.00 0.00 33.36 2.71
3580 3791 1.206132 AGTGCGTTGGATCGGATTGTA 59.794 47.619 0.00 0.00 33.36 2.41
3581 3792 1.593006 GTGCGTTGGATCGGATTGTAG 59.407 52.381 0.00 0.00 33.36 2.74
3582 3793 1.217882 GCGTTGGATCGGATTGTAGG 58.782 55.000 0.00 0.00 0.00 3.18
3583 3794 1.865865 CGTTGGATCGGATTGTAGGG 58.134 55.000 0.00 0.00 0.00 3.53
3584 3795 1.411246 CGTTGGATCGGATTGTAGGGA 59.589 52.381 0.00 0.00 0.00 4.20
3585 3796 2.802057 CGTTGGATCGGATTGTAGGGAC 60.802 54.545 0.00 0.00 0.00 4.46
3586 3797 2.168458 TGGATCGGATTGTAGGGACA 57.832 50.000 0.00 0.00 0.00 4.02
3587 3798 2.039418 TGGATCGGATTGTAGGGACAG 58.961 52.381 0.00 0.00 36.76 3.51
3588 3799 1.344763 GGATCGGATTGTAGGGACAGG 59.655 57.143 0.00 0.00 36.76 4.00
3589 3800 2.317040 GATCGGATTGTAGGGACAGGA 58.683 52.381 0.00 0.00 36.76 3.86
3590 3801 2.471815 TCGGATTGTAGGGACAGGAT 57.528 50.000 0.00 0.00 36.76 3.24
3591 3802 2.759355 TCGGATTGTAGGGACAGGATT 58.241 47.619 0.00 0.00 36.76 3.01
3592 3803 2.434336 TCGGATTGTAGGGACAGGATTG 59.566 50.000 0.00 0.00 36.76 2.67
3593 3804 2.485479 CGGATTGTAGGGACAGGATTGG 60.485 54.545 0.00 0.00 36.76 3.16
3594 3805 2.777692 GGATTGTAGGGACAGGATTGGA 59.222 50.000 0.00 0.00 36.76 3.53
3595 3806 3.395941 GGATTGTAGGGACAGGATTGGAT 59.604 47.826 0.00 0.00 36.76 3.41
3596 3807 4.597507 GGATTGTAGGGACAGGATTGGATA 59.402 45.833 0.00 0.00 36.76 2.59
3597 3808 5.073144 GGATTGTAGGGACAGGATTGGATAA 59.927 44.000 0.00 0.00 36.76 1.75
3598 3809 5.630415 TTGTAGGGACAGGATTGGATAAG 57.370 43.478 0.00 0.00 36.76 1.73
3599 3810 3.391296 TGTAGGGACAGGATTGGATAAGC 59.609 47.826 0.00 0.00 0.00 3.09
3600 3811 2.781667 AGGGACAGGATTGGATAAGCT 58.218 47.619 0.00 0.00 0.00 3.74
3601 3812 2.708325 AGGGACAGGATTGGATAAGCTC 59.292 50.000 0.00 0.00 0.00 4.09
3602 3813 2.439507 GGGACAGGATTGGATAAGCTCA 59.560 50.000 0.00 0.00 0.00 4.26
3603 3814 3.471680 GGACAGGATTGGATAAGCTCAC 58.528 50.000 0.00 0.00 0.00 3.51
3604 3815 3.471680 GACAGGATTGGATAAGCTCACC 58.528 50.000 0.00 0.00 0.00 4.02
3605 3816 3.118531 ACAGGATTGGATAAGCTCACCT 58.881 45.455 0.00 0.00 0.00 4.00
3606 3817 3.135530 ACAGGATTGGATAAGCTCACCTC 59.864 47.826 0.00 0.00 0.00 3.85
3607 3818 2.708325 AGGATTGGATAAGCTCACCTCC 59.292 50.000 0.00 0.00 0.00 4.30
3608 3819 2.708325 GGATTGGATAAGCTCACCTCCT 59.292 50.000 0.00 0.00 0.00 3.69
3609 3820 3.137360 GGATTGGATAAGCTCACCTCCTT 59.863 47.826 0.00 0.00 0.00 3.36
3610 3821 3.914426 TTGGATAAGCTCACCTCCTTC 57.086 47.619 0.00 0.00 0.00 3.46
3611 3822 3.121929 TGGATAAGCTCACCTCCTTCT 57.878 47.619 0.00 0.00 0.00 2.85
3612 3823 4.265856 TGGATAAGCTCACCTCCTTCTA 57.734 45.455 0.00 0.00 0.00 2.10
3613 3824 4.219115 TGGATAAGCTCACCTCCTTCTAG 58.781 47.826 0.00 0.00 0.00 2.43
3614 3825 3.006430 GGATAAGCTCACCTCCTTCTAGC 59.994 52.174 0.00 0.00 0.00 3.42
3615 3826 0.820871 AAGCTCACCTCCTTCTAGCG 59.179 55.000 0.00 0.00 38.23 4.26
3616 3827 0.033991 AGCTCACCTCCTTCTAGCGA 60.034 55.000 0.00 0.00 38.23 4.93
3617 3828 0.818296 GCTCACCTCCTTCTAGCGAA 59.182 55.000 0.00 0.00 0.00 4.70
3618 3829 1.410882 GCTCACCTCCTTCTAGCGAAT 59.589 52.381 0.00 0.00 0.00 3.34
3619 3830 2.623889 GCTCACCTCCTTCTAGCGAATA 59.376 50.000 0.00 0.00 0.00 1.75
3620 3831 3.257127 GCTCACCTCCTTCTAGCGAATAT 59.743 47.826 0.00 0.00 0.00 1.28
3621 3832 4.459685 GCTCACCTCCTTCTAGCGAATATA 59.540 45.833 0.00 0.00 0.00 0.86
3622 3833 5.620429 GCTCACCTCCTTCTAGCGAATATAC 60.620 48.000 0.00 0.00 0.00 1.47
3623 3834 5.382616 TCACCTCCTTCTAGCGAATATACA 58.617 41.667 0.00 0.00 0.00 2.29
3624 3835 5.831525 TCACCTCCTTCTAGCGAATATACAA 59.168 40.000 0.00 0.00 0.00 2.41
3625 3836 6.322969 TCACCTCCTTCTAGCGAATATACAAA 59.677 38.462 0.00 0.00 0.00 2.83
3626 3837 7.015292 TCACCTCCTTCTAGCGAATATACAAAT 59.985 37.037 0.00 0.00 0.00 2.32
3627 3838 8.304596 CACCTCCTTCTAGCGAATATACAAATA 58.695 37.037 0.00 0.00 0.00 1.40
3628 3839 8.867097 ACCTCCTTCTAGCGAATATACAAATAA 58.133 33.333 0.00 0.00 0.00 1.40
3629 3840 9.141400 CCTCCTTCTAGCGAATATACAAATAAC 57.859 37.037 0.00 0.00 0.00 1.89
3630 3841 9.692749 CTCCTTCTAGCGAATATACAAATAACA 57.307 33.333 0.00 0.00 0.00 2.41
3631 3842 9.472361 TCCTTCTAGCGAATATACAAATAACAC 57.528 33.333 0.00 0.00 0.00 3.32
3632 3843 8.709646 CCTTCTAGCGAATATACAAATAACACC 58.290 37.037 0.00 0.00 0.00 4.16
3633 3844 8.597662 TTCTAGCGAATATACAAATAACACCC 57.402 34.615 0.00 0.00 0.00 4.61
3634 3845 7.959175 TCTAGCGAATATACAAATAACACCCT 58.041 34.615 0.00 0.00 0.00 4.34
3635 3846 8.426489 TCTAGCGAATATACAAATAACACCCTT 58.574 33.333 0.00 0.00 0.00 3.95
3636 3847 7.875327 AGCGAATATACAAATAACACCCTTT 57.125 32.000 0.00 0.00 0.00 3.11
3637 3848 7.703328 AGCGAATATACAAATAACACCCTTTG 58.297 34.615 0.00 0.00 38.13 2.77
3638 3849 7.338449 AGCGAATATACAAATAACACCCTTTGT 59.662 33.333 6.02 6.02 45.07 2.83
3639 3850 8.614346 GCGAATATACAAATAACACCCTTTGTA 58.386 33.333 9.51 9.51 46.23 2.41
3640 3851 9.925268 CGAATATACAAATAACACCCTTTGTAC 57.075 33.333 9.34 0.00 45.48 2.90
3645 3856 7.210718 ACAAATAACACCCTTTGTACTTAGC 57.789 36.000 0.00 0.00 42.23 3.09
3646 3857 6.773685 ACAAATAACACCCTTTGTACTTAGCA 59.226 34.615 0.00 0.00 42.23 3.49
3647 3858 7.285858 ACAAATAACACCCTTTGTACTTAGCAA 59.714 33.333 0.00 0.00 42.23 3.91
3648 3859 8.303876 CAAATAACACCCTTTGTACTTAGCAAT 58.696 33.333 0.00 0.00 37.51 3.56
3649 3860 8.417273 AATAACACCCTTTGTACTTAGCAATT 57.583 30.769 0.00 0.00 37.51 2.32
3650 3861 5.959618 ACACCCTTTGTACTTAGCAATTC 57.040 39.130 0.00 0.00 36.32 2.17
3651 3862 5.381757 ACACCCTTTGTACTTAGCAATTCA 58.618 37.500 0.00 0.00 36.32 2.57
3652 3863 5.473504 ACACCCTTTGTACTTAGCAATTCAG 59.526 40.000 0.00 0.00 36.32 3.02
3653 3864 5.010282 ACCCTTTGTACTTAGCAATTCAGG 58.990 41.667 0.00 0.00 0.00 3.86
3654 3865 4.399303 CCCTTTGTACTTAGCAATTCAGGG 59.601 45.833 0.00 0.00 36.06 4.45
3655 3866 5.010282 CCTTTGTACTTAGCAATTCAGGGT 58.990 41.667 0.00 0.00 0.00 4.34
3656 3867 5.476945 CCTTTGTACTTAGCAATTCAGGGTT 59.523 40.000 0.00 0.00 0.00 4.11
3657 3868 6.657541 CCTTTGTACTTAGCAATTCAGGGTTA 59.342 38.462 0.00 0.00 0.00 2.85
3658 3869 7.175990 CCTTTGTACTTAGCAATTCAGGGTTAA 59.824 37.037 0.00 0.00 0.00 2.01
3659 3870 7.681939 TTGTACTTAGCAATTCAGGGTTAAG 57.318 36.000 0.00 0.00 34.98 1.85
3660 3871 6.775708 TGTACTTAGCAATTCAGGGTTAAGT 58.224 36.000 0.00 0.00 41.71 2.24
3661 3872 7.228590 TGTACTTAGCAATTCAGGGTTAAGTT 58.771 34.615 7.68 0.00 40.19 2.66
3662 3873 6.819397 ACTTAGCAATTCAGGGTTAAGTTC 57.181 37.500 0.00 0.00 37.64 3.01
3663 3874 6.303839 ACTTAGCAATTCAGGGTTAAGTTCA 58.696 36.000 0.00 0.00 37.64 3.18
3664 3875 6.948309 ACTTAGCAATTCAGGGTTAAGTTCAT 59.052 34.615 0.00 0.00 37.64 2.57
3665 3876 5.649782 AGCAATTCAGGGTTAAGTTCATG 57.350 39.130 0.00 0.00 0.00 3.07
3666 3877 4.463891 AGCAATTCAGGGTTAAGTTCATGG 59.536 41.667 0.00 0.00 0.00 3.66
3667 3878 4.747810 CAATTCAGGGTTAAGTTCATGGC 58.252 43.478 0.00 0.00 0.00 4.40
3668 3879 3.806949 TTCAGGGTTAAGTTCATGGCT 57.193 42.857 0.00 0.00 0.00 4.75
3669 3880 3.350219 TCAGGGTTAAGTTCATGGCTC 57.650 47.619 0.00 0.00 0.00 4.70
3670 3881 2.912956 TCAGGGTTAAGTTCATGGCTCT 59.087 45.455 0.00 0.00 0.00 4.09
3671 3882 3.330701 TCAGGGTTAAGTTCATGGCTCTT 59.669 43.478 0.00 0.00 0.00 2.85
3672 3883 4.534500 TCAGGGTTAAGTTCATGGCTCTTA 59.466 41.667 0.00 0.00 0.00 2.10
3673 3884 5.013704 TCAGGGTTAAGTTCATGGCTCTTAA 59.986 40.000 11.10 11.10 33.24 1.85
3674 3885 5.355350 CAGGGTTAAGTTCATGGCTCTTAAG 59.645 44.000 13.74 0.00 35.34 1.85
3675 3886 5.250774 AGGGTTAAGTTCATGGCTCTTAAGA 59.749 40.000 4.81 4.81 35.34 2.10
3676 3887 5.586643 GGGTTAAGTTCATGGCTCTTAAGAG 59.413 44.000 25.42 25.42 44.75 2.85
3677 3888 5.586643 GGTTAAGTTCATGGCTCTTAAGAGG 59.413 44.000 29.22 15.40 42.29 3.69
3678 3889 4.917906 AAGTTCATGGCTCTTAAGAGGT 57.082 40.909 29.22 0.00 42.29 3.85
3679 3890 4.479786 AGTTCATGGCTCTTAAGAGGTC 57.520 45.455 29.22 16.02 42.29 3.85
3680 3891 3.198853 AGTTCATGGCTCTTAAGAGGTCC 59.801 47.826 29.22 23.13 42.29 4.46
3681 3892 1.757118 TCATGGCTCTTAAGAGGTCCG 59.243 52.381 29.22 13.69 42.29 4.79
3682 3893 1.482593 CATGGCTCTTAAGAGGTCCGT 59.517 52.381 29.22 21.55 42.29 4.69
3683 3894 1.640917 TGGCTCTTAAGAGGTCCGTT 58.359 50.000 29.22 0.00 42.29 4.44
3684 3895 1.549170 TGGCTCTTAAGAGGTCCGTTC 59.451 52.381 29.22 13.46 42.29 3.95
3685 3896 1.549170 GGCTCTTAAGAGGTCCGTTCA 59.451 52.381 29.22 0.00 42.29 3.18
3686 3897 2.608268 GCTCTTAAGAGGTCCGTTCAC 58.392 52.381 29.22 9.38 42.29 3.18
3687 3898 2.231721 GCTCTTAAGAGGTCCGTTCACT 59.768 50.000 29.22 0.00 42.29 3.41
3688 3899 3.442977 GCTCTTAAGAGGTCCGTTCACTA 59.557 47.826 29.22 0.00 42.29 2.74
3689 3900 4.082354 GCTCTTAAGAGGTCCGTTCACTAA 60.082 45.833 29.22 0.00 42.29 2.24
3690 3901 5.382618 TCTTAAGAGGTCCGTTCACTAAC 57.617 43.478 0.00 0.00 0.00 2.34
3691 3902 4.828939 TCTTAAGAGGTCCGTTCACTAACA 59.171 41.667 0.00 0.00 35.16 2.41
3692 3903 5.302568 TCTTAAGAGGTCCGTTCACTAACAA 59.697 40.000 0.00 0.00 35.16 2.83
3693 3904 3.662247 AGAGGTCCGTTCACTAACAAG 57.338 47.619 0.00 0.00 35.16 3.16
3694 3905 3.228453 AGAGGTCCGTTCACTAACAAGA 58.772 45.455 0.00 0.00 35.16 3.02
3695 3906 3.640029 AGAGGTCCGTTCACTAACAAGAA 59.360 43.478 0.00 0.00 35.16 2.52
3696 3907 4.283722 AGAGGTCCGTTCACTAACAAGAAT 59.716 41.667 0.00 0.00 35.16 2.40
3697 3908 4.315803 AGGTCCGTTCACTAACAAGAATG 58.684 43.478 0.00 0.00 35.16 2.67
3698 3909 4.062991 GGTCCGTTCACTAACAAGAATGT 58.937 43.478 0.00 0.00 43.14 2.71
3699 3910 4.151867 GGTCCGTTCACTAACAAGAATGTC 59.848 45.833 0.00 0.00 39.40 3.06
3700 3911 4.748102 GTCCGTTCACTAACAAGAATGTCA 59.252 41.667 0.00 0.00 39.40 3.58
3701 3912 4.988540 TCCGTTCACTAACAAGAATGTCAG 59.011 41.667 0.00 0.00 39.40 3.51
3702 3913 4.377431 CCGTTCACTAACAAGAATGTCAGC 60.377 45.833 0.00 0.00 39.40 4.26
3703 3914 4.377431 CGTTCACTAACAAGAATGTCAGCC 60.377 45.833 0.00 0.00 39.40 4.85
3704 3915 4.623932 TCACTAACAAGAATGTCAGCCT 57.376 40.909 0.00 0.00 39.40 4.58
3705 3916 4.569943 TCACTAACAAGAATGTCAGCCTC 58.430 43.478 0.00 0.00 39.40 4.70
3706 3917 3.369147 CACTAACAAGAATGTCAGCCTCG 59.631 47.826 0.00 0.00 39.40 4.63
3707 3918 1.160137 AACAAGAATGTCAGCCTCGC 58.840 50.000 0.00 0.00 39.40 5.03
3708 3919 0.035317 ACAAGAATGTCAGCCTCGCA 59.965 50.000 0.00 0.00 33.41 5.10
3709 3920 0.445436 CAAGAATGTCAGCCTCGCAC 59.555 55.000 0.00 0.00 0.00 5.34
3710 3921 0.035317 AAGAATGTCAGCCTCGCACA 59.965 50.000 0.00 0.00 0.00 4.57
3711 3922 0.671781 AGAATGTCAGCCTCGCACAC 60.672 55.000 0.00 0.00 0.00 3.82
3712 3923 0.950555 GAATGTCAGCCTCGCACACA 60.951 55.000 0.00 0.00 0.00 3.72
3713 3924 0.321919 AATGTCAGCCTCGCACACAT 60.322 50.000 0.00 0.00 35.54 3.21
3714 3925 0.321919 ATGTCAGCCTCGCACACATT 60.322 50.000 0.00 0.00 31.88 2.71
3715 3926 0.534877 TGTCAGCCTCGCACACATTT 60.535 50.000 0.00 0.00 0.00 2.32
3716 3927 0.110056 GTCAGCCTCGCACACATTTG 60.110 55.000 0.00 0.00 0.00 2.32
3717 3928 1.443194 CAGCCTCGCACACATTTGC 60.443 57.895 0.00 0.00 39.28 3.68
3718 3929 1.601759 AGCCTCGCACACATTTGCT 60.602 52.632 0.00 0.00 40.62 3.91
3719 3930 1.154150 GCCTCGCACACATTTGCTC 60.154 57.895 0.00 0.00 40.62 4.26
3720 3931 1.580845 GCCTCGCACACATTTGCTCT 61.581 55.000 0.00 0.00 40.62 4.09
3721 3932 0.877071 CCTCGCACACATTTGCTCTT 59.123 50.000 0.00 0.00 40.62 2.85
3722 3933 1.135859 CCTCGCACACATTTGCTCTTC 60.136 52.381 0.00 0.00 40.62 2.87
3723 3934 1.532437 CTCGCACACATTTGCTCTTCA 59.468 47.619 0.00 0.00 40.62 3.02
3724 3935 2.153645 TCGCACACATTTGCTCTTCAT 58.846 42.857 0.00 0.00 40.62 2.57
3725 3936 2.095617 TCGCACACATTTGCTCTTCATG 60.096 45.455 0.00 0.00 40.62 3.07
3726 3937 1.990563 GCACACATTTGCTCTTCATGC 59.009 47.619 0.00 0.00 39.59 4.06
3727 3938 2.602878 CACACATTTGCTCTTCATGCC 58.397 47.619 0.00 0.00 0.00 4.40
3728 3939 2.029739 CACACATTTGCTCTTCATGCCA 60.030 45.455 0.00 0.00 0.00 4.92
3729 3940 2.629137 ACACATTTGCTCTTCATGCCAA 59.371 40.909 0.00 0.00 0.00 4.52
3730 3941 3.250744 CACATTTGCTCTTCATGCCAAG 58.749 45.455 0.00 0.00 0.00 3.61
3731 3942 2.895404 ACATTTGCTCTTCATGCCAAGT 59.105 40.909 0.00 0.00 0.00 3.16
3732 3943 4.081406 ACATTTGCTCTTCATGCCAAGTA 58.919 39.130 0.00 0.00 0.00 2.24
3733 3944 4.082571 ACATTTGCTCTTCATGCCAAGTAC 60.083 41.667 0.00 0.00 0.00 2.73
3734 3945 2.857186 TGCTCTTCATGCCAAGTACA 57.143 45.000 0.00 0.00 0.00 2.90
3735 3946 2.703416 TGCTCTTCATGCCAAGTACAG 58.297 47.619 0.00 0.00 0.00 2.74
3736 3947 2.302733 TGCTCTTCATGCCAAGTACAGA 59.697 45.455 0.00 0.00 0.00 3.41
3737 3948 3.054875 TGCTCTTCATGCCAAGTACAGAT 60.055 43.478 0.00 0.00 0.00 2.90
3738 3949 4.162131 TGCTCTTCATGCCAAGTACAGATA 59.838 41.667 0.00 0.00 0.00 1.98
3739 3950 5.118990 GCTCTTCATGCCAAGTACAGATAA 58.881 41.667 0.00 0.00 0.00 1.75
3740 3951 5.236047 GCTCTTCATGCCAAGTACAGATAAG 59.764 44.000 0.00 0.00 0.00 1.73
3741 3952 6.299805 TCTTCATGCCAAGTACAGATAAGT 57.700 37.500 0.00 0.00 0.00 2.24
3742 3953 6.711277 TCTTCATGCCAAGTACAGATAAGTT 58.289 36.000 0.00 0.00 0.00 2.66
3743 3954 7.168219 TCTTCATGCCAAGTACAGATAAGTTT 58.832 34.615 0.00 0.00 0.00 2.66
3744 3955 6.985188 TCATGCCAAGTACAGATAAGTTTC 57.015 37.500 0.00 0.00 0.00 2.78
3745 3956 6.711277 TCATGCCAAGTACAGATAAGTTTCT 58.289 36.000 0.00 0.00 0.00 2.52
3746 3957 6.595326 TCATGCCAAGTACAGATAAGTTTCTG 59.405 38.462 11.28 11.28 46.94 3.02
3747 3958 6.109156 TGCCAAGTACAGATAAGTTTCTGA 57.891 37.500 16.84 4.00 44.88 3.27
3748 3959 5.932303 TGCCAAGTACAGATAAGTTTCTGAC 59.068 40.000 16.84 11.97 44.88 3.51
3749 3960 5.932303 GCCAAGTACAGATAAGTTTCTGACA 59.068 40.000 16.84 6.25 44.88 3.58
3750 3961 6.595716 GCCAAGTACAGATAAGTTTCTGACAT 59.404 38.462 16.84 6.13 44.88 3.06
3751 3962 7.764443 GCCAAGTACAGATAAGTTTCTGACATA 59.236 37.037 16.84 2.82 44.88 2.29
3752 3963 9.307121 CCAAGTACAGATAAGTTTCTGACATAG 57.693 37.037 16.84 7.63 44.88 2.23
3755 3966 8.410141 AGTACAGATAAGTTTCTGACATAGAGC 58.590 37.037 16.84 0.00 44.88 4.09
3756 3967 7.416964 ACAGATAAGTTTCTGACATAGAGCT 57.583 36.000 16.84 0.00 44.88 4.09
3757 3968 7.264221 ACAGATAAGTTTCTGACATAGAGCTG 58.736 38.462 16.84 0.00 44.88 4.24
3758 3969 7.123397 ACAGATAAGTTTCTGACATAGAGCTGA 59.877 37.037 16.84 0.00 44.88 4.26
3759 3970 7.434897 CAGATAAGTTTCTGACATAGAGCTGAC 59.565 40.741 0.00 0.00 44.88 3.51
3760 3971 5.736951 AAGTTTCTGACATAGAGCTGACT 57.263 39.130 0.00 0.00 36.61 3.41
3761 3972 6.842437 AAGTTTCTGACATAGAGCTGACTA 57.158 37.500 0.00 0.00 36.61 2.59
3762 3973 6.449635 AGTTTCTGACATAGAGCTGACTAG 57.550 41.667 0.00 0.00 36.61 2.57
3774 3985 3.641437 GCTGACTAGCTCATGGACTAG 57.359 52.381 16.72 16.72 46.57 2.57
3779 3990 3.292460 ACTAGCTCATGGACTAGTCACC 58.708 50.000 23.91 9.38 44.48 4.02
3780 3991 2.238084 AGCTCATGGACTAGTCACCA 57.762 50.000 23.91 14.95 40.57 4.17
3781 3992 1.827969 AGCTCATGGACTAGTCACCAC 59.172 52.381 23.91 7.51 39.06 4.16
3782 3993 1.550524 GCTCATGGACTAGTCACCACA 59.449 52.381 23.91 12.93 39.06 4.17
3783 3994 2.028112 GCTCATGGACTAGTCACCACAA 60.028 50.000 23.91 6.01 39.06 3.33
3784 3995 3.369892 GCTCATGGACTAGTCACCACAAT 60.370 47.826 23.91 5.15 39.06 2.71
3785 3996 4.836825 CTCATGGACTAGTCACCACAATT 58.163 43.478 23.91 0.00 39.06 2.32
3786 3997 5.241403 TCATGGACTAGTCACCACAATTT 57.759 39.130 23.91 0.00 39.06 1.82
3787 3998 6.367374 TCATGGACTAGTCACCACAATTTA 57.633 37.500 23.91 0.00 39.06 1.40
3788 3999 6.406370 TCATGGACTAGTCACCACAATTTAG 58.594 40.000 23.91 3.66 39.06 1.85
3789 4000 5.160607 TGGACTAGTCACCACAATTTAGG 57.839 43.478 23.91 0.00 0.00 2.69
3790 4001 4.841813 TGGACTAGTCACCACAATTTAGGA 59.158 41.667 23.91 0.00 0.00 2.94
3791 4002 5.308497 TGGACTAGTCACCACAATTTAGGAA 59.692 40.000 23.91 0.00 0.00 3.36
3792 4003 6.012858 TGGACTAGTCACCACAATTTAGGAAT 60.013 38.462 23.91 0.00 0.00 3.01
3793 4004 7.181305 TGGACTAGTCACCACAATTTAGGAATA 59.819 37.037 23.91 0.00 0.00 1.75
3794 4005 7.494952 GGACTAGTCACCACAATTTAGGAATAC 59.505 40.741 23.91 0.00 0.00 1.89
3795 4006 7.336396 ACTAGTCACCACAATTTAGGAATACC 58.664 38.462 0.00 0.00 0.00 2.73
3796 4007 6.134535 AGTCACCACAATTTAGGAATACCA 57.865 37.500 0.04 0.00 38.94 3.25
3797 4008 6.180472 AGTCACCACAATTTAGGAATACCAG 58.820 40.000 0.04 0.00 38.94 4.00
3798 4009 4.947388 TCACCACAATTTAGGAATACCAGC 59.053 41.667 0.04 0.00 38.94 4.85
3799 4010 4.097892 CACCACAATTTAGGAATACCAGCC 59.902 45.833 0.04 0.00 38.94 4.85
3800 4011 4.264172 ACCACAATTTAGGAATACCAGCCA 60.264 41.667 0.04 0.00 38.94 4.75
3801 4012 4.339247 CCACAATTTAGGAATACCAGCCAG 59.661 45.833 0.00 0.00 38.94 4.85
3802 4013 3.954258 ACAATTTAGGAATACCAGCCAGC 59.046 43.478 0.00 0.00 38.94 4.85
3803 4014 2.729028 TTTAGGAATACCAGCCAGCC 57.271 50.000 0.00 0.00 38.94 4.85
3804 4015 1.590591 TTAGGAATACCAGCCAGCCA 58.409 50.000 0.00 0.00 38.94 4.75
3805 4016 1.590591 TAGGAATACCAGCCAGCCAA 58.409 50.000 0.00 0.00 38.94 4.52
3806 4017 0.704076 AGGAATACCAGCCAGCCAAA 59.296 50.000 0.00 0.00 38.94 3.28
3807 4018 1.077005 AGGAATACCAGCCAGCCAAAA 59.923 47.619 0.00 0.00 38.94 2.44
3808 4019 1.899142 GGAATACCAGCCAGCCAAAAA 59.101 47.619 0.00 0.00 35.97 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 2.171003 GCTTTAGCTTTGGTGGGTCAT 58.829 47.619 0.00 0.00 38.21 3.06
40 41 2.571212 TGTTGTTTCTGCAGACGGATT 58.429 42.857 18.03 0.00 0.00 3.01
79 80 3.714487 ATTTGATGGGGCGGGACCG 62.714 63.158 6.35 6.35 40.62 4.79
80 81 1.828224 GATTTGATGGGGCGGGACC 60.828 63.158 0.00 0.00 37.93 4.46
81 82 1.077068 TGATTTGATGGGGCGGGAC 60.077 57.895 0.00 0.00 0.00 4.46
117 118 2.048312 GATTTTGCGAGCTACCCGGC 62.048 60.000 0.00 0.00 0.00 6.13
118 119 0.462047 AGATTTTGCGAGCTACCCGG 60.462 55.000 0.00 0.00 0.00 5.73
120 121 0.378610 GCAGATTTTGCGAGCTACCC 59.621 55.000 0.00 0.00 44.09 3.69
121 122 3.905900 GCAGATTTTGCGAGCTACC 57.094 52.632 0.00 0.00 44.09 3.18
130 131 4.643334 TGATGAGAGGGATTGCAGATTTTG 59.357 41.667 0.00 0.00 0.00 2.44
131 132 4.863548 TGATGAGAGGGATTGCAGATTTT 58.136 39.130 0.00 0.00 0.00 1.82
132 133 4.515028 TGATGAGAGGGATTGCAGATTT 57.485 40.909 0.00 0.00 0.00 2.17
133 134 4.506979 GGATGATGAGAGGGATTGCAGATT 60.507 45.833 0.00 0.00 0.00 2.40
134 135 3.009253 GGATGATGAGAGGGATTGCAGAT 59.991 47.826 0.00 0.00 0.00 2.90
135 136 2.371179 GGATGATGAGAGGGATTGCAGA 59.629 50.000 0.00 0.00 0.00 4.26
136 137 2.780714 GGATGATGAGAGGGATTGCAG 58.219 52.381 0.00 0.00 0.00 4.41
137 138 1.071228 CGGATGATGAGAGGGATTGCA 59.929 52.381 0.00 0.00 0.00 4.08
138 139 1.805869 CGGATGATGAGAGGGATTGC 58.194 55.000 0.00 0.00 0.00 3.56
139 140 1.347050 AGCGGATGATGAGAGGGATTG 59.653 52.381 0.00 0.00 0.00 2.67
140 141 1.622811 GAGCGGATGATGAGAGGGATT 59.377 52.381 0.00 0.00 0.00 3.01
141 142 1.265236 GAGCGGATGATGAGAGGGAT 58.735 55.000 0.00 0.00 0.00 3.85
142 143 0.106015 TGAGCGGATGATGAGAGGGA 60.106 55.000 0.00 0.00 0.00 4.20
143 144 0.755079 TTGAGCGGATGATGAGAGGG 59.245 55.000 0.00 0.00 0.00 4.30
144 145 1.137675 TGTTGAGCGGATGATGAGAGG 59.862 52.381 0.00 0.00 0.00 3.69
145 146 2.591571 TGTTGAGCGGATGATGAGAG 57.408 50.000 0.00 0.00 0.00 3.20
146 147 2.234661 ACTTGTTGAGCGGATGATGAGA 59.765 45.455 0.00 0.00 0.00 3.27
147 148 2.606725 GACTTGTTGAGCGGATGATGAG 59.393 50.000 0.00 0.00 0.00 2.90
148 149 2.234661 AGACTTGTTGAGCGGATGATGA 59.765 45.455 0.00 0.00 0.00 2.92
149 150 2.606725 GAGACTTGTTGAGCGGATGATG 59.393 50.000 0.00 0.00 0.00 3.07
150 151 2.234661 TGAGACTTGTTGAGCGGATGAT 59.765 45.455 0.00 0.00 0.00 2.45
151 152 1.618343 TGAGACTTGTTGAGCGGATGA 59.382 47.619 0.00 0.00 0.00 2.92
152 153 1.998315 CTGAGACTTGTTGAGCGGATG 59.002 52.381 0.00 0.00 0.00 3.51
153 154 1.895798 TCTGAGACTTGTTGAGCGGAT 59.104 47.619 0.00 0.00 0.00 4.18
154 155 1.328279 TCTGAGACTTGTTGAGCGGA 58.672 50.000 0.00 0.00 0.00 5.54
155 156 2.376808 ATCTGAGACTTGTTGAGCGG 57.623 50.000 0.00 0.00 0.00 5.52
156 157 3.742882 TCAAATCTGAGACTTGTTGAGCG 59.257 43.478 3.43 0.00 0.00 5.03
183 184 1.516603 GGGTCAAGCGCTAGTCGAC 60.517 63.158 12.05 15.06 41.67 4.20
405 414 3.132824 CCATGGGAAGTGAAAATTAGCCC 59.867 47.826 2.85 0.00 34.67 5.19
451 460 1.794222 GACCGACCCATTTTCAGCG 59.206 57.895 0.00 0.00 0.00 5.18
512 521 2.202932 CCTCGATCGCCAGGTTGG 60.203 66.667 11.09 0.00 41.55 3.77
557 569 2.279517 CGTGTATCTCGCCAGCCC 60.280 66.667 0.00 0.00 0.00 5.19
587 600 2.753701 CCAACCACCCGTCCATCA 59.246 61.111 0.00 0.00 0.00 3.07
595 608 0.469144 TCAAAAGAGCCCAACCACCC 60.469 55.000 0.00 0.00 0.00 4.61
598 611 0.106268 TGCTCAAAAGAGCCCAACCA 60.106 50.000 14.22 0.00 46.96 3.67
633 646 3.754850 ACTGCTACGTGTAGTATGTCACA 59.245 43.478 0.00 0.00 39.83 3.58
664 680 4.588951 TCTCACTCCTCTTTACACACACAT 59.411 41.667 0.00 0.00 0.00 3.21
707 729 2.116238 GGCTGGAACATCCTAGTACCA 58.884 52.381 0.00 0.00 42.15 3.25
729 751 3.490759 GCCGATGCGTGTGGAGTG 61.491 66.667 0.00 0.00 0.00 3.51
730 752 4.760047 GGCCGATGCGTGTGGAGT 62.760 66.667 0.00 0.00 38.85 3.85
767 798 1.056660 GGGTTGAGGACTTGAGGTCA 58.943 55.000 0.00 0.00 46.16 4.02
958 992 0.686789 TCACTCTGGCTAGCTGCAAA 59.313 50.000 15.72 0.00 45.15 3.68
969 1003 2.752354 CCTCACTACTCACTCACTCTGG 59.248 54.545 0.00 0.00 0.00 3.86
970 1004 2.163412 GCCTCACTACTCACTCACTCTG 59.837 54.545 0.00 0.00 0.00 3.35
1287 1335 1.033746 ATCAGCCATGGCCAGAAACG 61.034 55.000 33.14 12.72 43.17 3.60
1294 1342 2.969238 CGTCGATCAGCCATGGCC 60.969 66.667 33.14 16.65 43.17 5.36
1324 1375 0.612744 TCCATCACATCTTCGCACCA 59.387 50.000 0.00 0.00 0.00 4.17
1327 1378 2.349590 CTTGTCCATCACATCTTCGCA 58.650 47.619 0.00 0.00 33.90 5.10
1350 1401 2.803155 CTTTGCCCCTCAGCAGCGTA 62.803 60.000 0.00 0.00 45.13 4.42
1409 1464 0.038343 GTACAGTAAACGACCCGGCA 60.038 55.000 0.00 0.00 0.00 5.69
1415 1470 1.063031 GGGCGTGTACAGTAAACGAC 58.937 55.000 24.87 22.35 44.62 4.34
1433 1488 5.522460 ACATTTTCATGAGAATACGTACGGG 59.478 40.000 21.06 0.22 34.11 5.28
1483 1544 7.510549 TCTTGTAGTTCCTTCAAATCAAAGG 57.489 36.000 0.00 0.00 43.94 3.11
1711 1773 6.773638 TCATGCTAGGAAGAAGAAGAAGTTT 58.226 36.000 0.00 0.00 0.00 2.66
1839 1906 4.321230 GGACCATTCATTTGAAAACGAGCT 60.321 41.667 0.00 0.00 37.61 4.09
1840 1907 3.920412 GGACCATTCATTTGAAAACGAGC 59.080 43.478 0.00 0.00 37.61 5.03
1853 1920 3.102972 CTCCTCTCTCTTGGACCATTCA 58.897 50.000 0.00 0.00 0.00 2.57
1963 2035 0.669318 CTAGCGTTTGAGCCGTTGGA 60.669 55.000 0.00 0.00 38.01 3.53
2089 2162 1.623811 ACCACTGTATTTCTGCCTCGT 59.376 47.619 0.00 0.00 0.00 4.18
2092 2165 2.639839 AGTGACCACTGTATTTCTGCCT 59.360 45.455 1.31 0.00 40.75 4.75
2093 2166 3.059352 AGTGACCACTGTATTTCTGCC 57.941 47.619 1.31 0.00 40.75 4.85
2159 2242 3.691342 CGGAGGTGCTGGAACCGA 61.691 66.667 0.00 0.00 45.53 4.69
2235 2318 4.789075 CCGGTAGCCGTCCACGTG 62.789 72.222 9.08 9.08 46.80 4.49
2670 2756 1.581923 TACTCCTTCTCCTCCGCCCT 61.582 60.000 0.00 0.00 0.00 5.19
2756 2842 2.092882 GGTGTACGAGTTGGAGCGC 61.093 63.158 0.00 0.00 0.00 5.92
2785 2871 6.429078 TGCAAAAGTTTTTATTATGGCATGCA 59.571 30.769 21.36 6.13 0.00 3.96
2786 2872 6.840075 TGCAAAAGTTTTTATTATGGCATGC 58.160 32.000 9.90 9.90 0.00 4.06
2787 2873 9.674824 TTTTGCAAAAGTTTTTATTATGGCATG 57.325 25.926 20.46 0.00 0.00 4.06
2789 2875 9.508567 GTTTTTGCAAAAGTTTTTATTATGGCA 57.491 25.926 22.78 0.74 0.00 4.92
2790 2876 8.963130 GGTTTTTGCAAAAGTTTTTATTATGGC 58.037 29.630 22.78 0.00 0.00 4.40
2791 2877 9.163903 CGGTTTTTGCAAAAGTTTTTATTATGG 57.836 29.630 22.78 0.40 0.00 2.74
2792 2878 9.922305 TCGGTTTTTGCAAAAGTTTTTATTATG 57.078 25.926 22.78 4.56 0.00 1.90
2798 2884 9.497030 GATTATTCGGTTTTTGCAAAAGTTTTT 57.503 25.926 22.78 11.30 0.00 1.94
2799 2885 8.669243 TGATTATTCGGTTTTTGCAAAAGTTTT 58.331 25.926 22.78 10.83 0.00 2.43
2800 2886 8.202745 TGATTATTCGGTTTTTGCAAAAGTTT 57.797 26.923 22.78 9.93 0.00 2.66
2801 2887 7.518211 GCTGATTATTCGGTTTTTGCAAAAGTT 60.518 33.333 22.78 9.33 0.00 2.66
2802 2888 6.073819 GCTGATTATTCGGTTTTTGCAAAAGT 60.074 34.615 22.78 9.94 0.00 2.66
2803 2889 6.146021 AGCTGATTATTCGGTTTTTGCAAAAG 59.854 34.615 22.78 13.03 0.00 2.27
2804 2890 5.988561 AGCTGATTATTCGGTTTTTGCAAAA 59.011 32.000 20.46 20.46 0.00 2.44
2805 2891 5.537188 AGCTGATTATTCGGTTTTTGCAAA 58.463 33.333 8.05 8.05 0.00 3.68
2806 2892 5.132897 AGCTGATTATTCGGTTTTTGCAA 57.867 34.783 0.00 0.00 0.00 4.08
2807 2893 4.782019 AGCTGATTATTCGGTTTTTGCA 57.218 36.364 0.00 0.00 0.00 4.08
2808 2894 5.668621 GCAAAGCTGATTATTCGGTTTTTGC 60.669 40.000 21.18 21.18 44.23 3.68
2809 2895 5.634859 AGCAAAGCTGATTATTCGGTTTTTG 59.365 36.000 5.77 10.96 38.98 2.44
2810 2896 5.783111 AGCAAAGCTGATTATTCGGTTTTT 58.217 33.333 5.77 0.96 38.98 1.94
2811 2897 5.391312 AGCAAAGCTGATTATTCGGTTTT 57.609 34.783 0.00 3.30 40.91 2.43
2812 2898 5.163513 CAAGCAAAGCTGATTATTCGGTTT 58.836 37.500 0.00 0.00 39.62 3.27
2813 2899 4.737054 CAAGCAAAGCTGATTATTCGGTT 58.263 39.130 0.00 0.00 39.62 4.44
2814 2900 3.428045 GCAAGCAAAGCTGATTATTCGGT 60.428 43.478 0.00 0.00 39.62 4.69
2815 2901 3.111098 GCAAGCAAAGCTGATTATTCGG 58.889 45.455 0.00 0.00 39.62 4.30
2816 2902 3.761657 TGCAAGCAAAGCTGATTATTCG 58.238 40.909 0.00 0.00 39.62 3.34
2817 2903 4.328169 GGTTGCAAGCAAAGCTGATTATTC 59.672 41.667 23.18 0.00 39.62 1.75
2818 2904 4.248058 GGTTGCAAGCAAAGCTGATTATT 58.752 39.130 23.18 0.00 39.62 1.40
2819 2905 3.258872 TGGTTGCAAGCAAAGCTGATTAT 59.741 39.130 27.92 0.00 39.62 1.28
2820 2906 2.627221 TGGTTGCAAGCAAAGCTGATTA 59.373 40.909 27.92 1.22 39.62 1.75
2844 2934 1.910688 GTGACGAACGAAGGAGGATC 58.089 55.000 0.14 0.00 0.00 3.36
2868 2958 7.559590 ACTTCAAACTGAGAATATGTATGCC 57.440 36.000 0.00 0.00 0.00 4.40
2912 3009 2.155732 CGTCCGACAGTGTCATTCAAAG 59.844 50.000 22.66 4.73 32.09 2.77
3023 3121 0.034186 CCTGCCATGGCTAAAGACCA 60.034 55.000 35.53 13.44 42.61 4.02
3035 3133 2.607750 ACCTCCGTGTCCTGCCAT 60.608 61.111 0.00 0.00 0.00 4.40
3250 3356 0.586502 CGTACGTACGTACTTCCCGC 60.587 60.000 40.05 22.55 46.22 6.13
3295 3496 0.107017 AGCCAACGAGAATCCATGGG 60.107 55.000 13.02 0.00 37.70 4.00
3334 3538 1.008194 GTGCCACGTGACACGACTA 60.008 57.895 33.12 13.78 46.05 2.59
3496 3707 2.398498 CGTAGCACCAGATATGCACTC 58.602 52.381 0.00 0.00 45.92 3.51
3497 3708 1.069204 CCGTAGCACCAGATATGCACT 59.931 52.381 0.00 0.00 45.92 4.40
3498 3709 1.502231 CCGTAGCACCAGATATGCAC 58.498 55.000 0.00 0.00 45.92 4.57
3499 3710 0.249868 GCCGTAGCACCAGATATGCA 60.250 55.000 0.00 0.00 45.92 3.96
3500 3711 0.034059 AGCCGTAGCACCAGATATGC 59.966 55.000 0.00 0.00 43.56 3.14
3501 3712 1.341209 TGAGCCGTAGCACCAGATATG 59.659 52.381 0.00 0.00 43.56 1.78
3502 3713 1.615883 CTGAGCCGTAGCACCAGATAT 59.384 52.381 2.57 0.00 41.60 1.63
3503 3714 1.032794 CTGAGCCGTAGCACCAGATA 58.967 55.000 2.57 0.00 41.60 1.98
3504 3715 0.684479 TCTGAGCCGTAGCACCAGAT 60.684 55.000 6.21 0.00 42.33 2.90
3505 3716 1.304134 TCTGAGCCGTAGCACCAGA 60.304 57.895 6.21 6.21 43.84 3.86
3506 3717 1.140589 CTCTGAGCCGTAGCACCAG 59.859 63.158 0.00 0.00 43.56 4.00
3507 3718 0.323087 TACTCTGAGCCGTAGCACCA 60.323 55.000 4.19 0.00 43.56 4.17
3508 3719 1.033574 ATACTCTGAGCCGTAGCACC 58.966 55.000 4.19 0.00 43.56 5.01
3509 3720 1.866063 GCATACTCTGAGCCGTAGCAC 60.866 57.143 4.19 0.00 43.56 4.40
3510 3721 0.385751 GCATACTCTGAGCCGTAGCA 59.614 55.000 4.19 0.00 43.56 3.49
3511 3722 0.671251 AGCATACTCTGAGCCGTAGC 59.329 55.000 4.19 2.59 40.32 3.58
3512 3723 2.096169 CGTAGCATACTCTGAGCCGTAG 60.096 54.545 4.19 0.00 40.12 3.51
3513 3724 1.871676 CGTAGCATACTCTGAGCCGTA 59.128 52.381 4.19 0.00 40.12 4.02
3514 3725 0.663688 CGTAGCATACTCTGAGCCGT 59.336 55.000 4.19 0.00 40.12 5.68
3515 3726 3.463574 CGTAGCATACTCTGAGCCG 57.536 57.895 4.19 0.00 40.12 5.52
3529 3740 2.054140 GAGGTCTCGGAGCAGCGTAG 62.054 65.000 0.00 0.00 31.89 3.51
3530 3741 2.045242 AGGTCTCGGAGCAGCGTA 60.045 61.111 0.00 0.00 31.89 4.42
3531 3742 3.444805 GAGGTCTCGGAGCAGCGT 61.445 66.667 0.00 0.00 31.89 5.07
3532 3743 4.200283 GGAGGTCTCGGAGCAGCG 62.200 72.222 0.00 0.00 31.89 5.18
3533 3744 4.200283 CGGAGGTCTCGGAGCAGC 62.200 72.222 0.00 0.00 31.89 5.25
3534 3745 2.438614 TCGGAGGTCTCGGAGCAG 60.439 66.667 0.00 0.00 34.61 4.24
3535 3746 2.438614 CTCGGAGGTCTCGGAGCA 60.439 66.667 18.17 0.00 45.54 4.26
3538 3749 1.078356 CTGTCTCGGAGGTCTCGGA 60.078 63.158 4.96 7.77 37.38 4.55
3539 3750 0.961358 AACTGTCTCGGAGGTCTCGG 60.961 60.000 4.96 2.17 0.00 4.63
3540 3751 0.882474 AAACTGTCTCGGAGGTCTCG 59.118 55.000 4.96 0.00 0.00 4.04
3541 3752 3.083293 ACTAAACTGTCTCGGAGGTCTC 58.917 50.000 4.96 0.00 0.00 3.36
3542 3753 2.820787 CACTAAACTGTCTCGGAGGTCT 59.179 50.000 4.96 0.00 0.00 3.85
3543 3754 2.671632 GCACTAAACTGTCTCGGAGGTC 60.672 54.545 4.96 0.00 0.00 3.85
3544 3755 1.272769 GCACTAAACTGTCTCGGAGGT 59.727 52.381 4.96 0.00 0.00 3.85
3545 3756 1.732732 CGCACTAAACTGTCTCGGAGG 60.733 57.143 4.96 0.00 0.00 4.30
3546 3757 1.068472 ACGCACTAAACTGTCTCGGAG 60.068 52.381 0.00 0.00 0.00 4.63
3547 3758 0.956633 ACGCACTAAACTGTCTCGGA 59.043 50.000 0.00 0.00 0.00 4.55
3548 3759 1.455786 CAACGCACTAAACTGTCTCGG 59.544 52.381 0.00 0.00 0.00 4.63
3549 3760 1.455786 CCAACGCACTAAACTGTCTCG 59.544 52.381 0.00 0.00 0.00 4.04
3550 3761 2.750948 TCCAACGCACTAAACTGTCTC 58.249 47.619 0.00 0.00 0.00 3.36
3551 3762 2.902705 TCCAACGCACTAAACTGTCT 57.097 45.000 0.00 0.00 0.00 3.41
3552 3763 2.092211 CGATCCAACGCACTAAACTGTC 59.908 50.000 0.00 0.00 0.00 3.51
3553 3764 2.066262 CGATCCAACGCACTAAACTGT 58.934 47.619 0.00 0.00 0.00 3.55
3554 3765 1.393539 CCGATCCAACGCACTAAACTG 59.606 52.381 0.00 0.00 0.00 3.16
3555 3766 1.274167 TCCGATCCAACGCACTAAACT 59.726 47.619 0.00 0.00 0.00 2.66
3556 3767 1.717194 TCCGATCCAACGCACTAAAC 58.283 50.000 0.00 0.00 0.00 2.01
3557 3768 2.675844 CAATCCGATCCAACGCACTAAA 59.324 45.455 0.00 0.00 0.00 1.85
3558 3769 2.276201 CAATCCGATCCAACGCACTAA 58.724 47.619 0.00 0.00 0.00 2.24
3559 3770 1.206132 ACAATCCGATCCAACGCACTA 59.794 47.619 0.00 0.00 0.00 2.74
3560 3771 0.036388 ACAATCCGATCCAACGCACT 60.036 50.000 0.00 0.00 0.00 4.40
3561 3772 1.593006 CTACAATCCGATCCAACGCAC 59.407 52.381 0.00 0.00 0.00 5.34
3562 3773 1.472552 CCTACAATCCGATCCAACGCA 60.473 52.381 0.00 0.00 0.00 5.24
3563 3774 1.217882 CCTACAATCCGATCCAACGC 58.782 55.000 0.00 0.00 0.00 4.84
3564 3775 1.411246 TCCCTACAATCCGATCCAACG 59.589 52.381 0.00 0.00 0.00 4.10
3565 3776 2.169769 TGTCCCTACAATCCGATCCAAC 59.830 50.000 0.00 0.00 30.91 3.77
3566 3777 2.434336 CTGTCCCTACAATCCGATCCAA 59.566 50.000 0.00 0.00 34.49 3.53
3567 3778 2.039418 CTGTCCCTACAATCCGATCCA 58.961 52.381 0.00 0.00 34.49 3.41
3568 3779 1.344763 CCTGTCCCTACAATCCGATCC 59.655 57.143 0.00 0.00 34.49 3.36
3569 3780 2.317040 TCCTGTCCCTACAATCCGATC 58.683 52.381 0.00 0.00 34.49 3.69
3570 3781 2.471815 TCCTGTCCCTACAATCCGAT 57.528 50.000 0.00 0.00 34.49 4.18
3571 3782 2.434336 CAATCCTGTCCCTACAATCCGA 59.566 50.000 0.00 0.00 34.49 4.55
3572 3783 2.485479 CCAATCCTGTCCCTACAATCCG 60.485 54.545 0.00 0.00 34.49 4.18
3573 3784 2.777692 TCCAATCCTGTCCCTACAATCC 59.222 50.000 0.00 0.00 34.49 3.01
3574 3785 4.713792 ATCCAATCCTGTCCCTACAATC 57.286 45.455 0.00 0.00 34.49 2.67
3575 3786 5.456763 GCTTATCCAATCCTGTCCCTACAAT 60.457 44.000 0.00 0.00 34.49 2.71
3576 3787 4.141482 GCTTATCCAATCCTGTCCCTACAA 60.141 45.833 0.00 0.00 34.49 2.41
3577 3788 3.391296 GCTTATCCAATCCTGTCCCTACA 59.609 47.826 0.00 0.00 0.00 2.74
3578 3789 3.648545 AGCTTATCCAATCCTGTCCCTAC 59.351 47.826 0.00 0.00 0.00 3.18
3579 3790 3.904339 GAGCTTATCCAATCCTGTCCCTA 59.096 47.826 0.00 0.00 0.00 3.53
3580 3791 2.708325 GAGCTTATCCAATCCTGTCCCT 59.292 50.000 0.00 0.00 0.00 4.20
3581 3792 2.439507 TGAGCTTATCCAATCCTGTCCC 59.560 50.000 0.00 0.00 0.00 4.46
3582 3793 3.471680 GTGAGCTTATCCAATCCTGTCC 58.528 50.000 0.00 0.00 0.00 4.02
3583 3794 3.135530 AGGTGAGCTTATCCAATCCTGTC 59.864 47.826 0.00 0.00 0.00 3.51
3584 3795 3.118531 AGGTGAGCTTATCCAATCCTGT 58.881 45.455 0.00 0.00 0.00 4.00
3585 3796 3.495806 GGAGGTGAGCTTATCCAATCCTG 60.496 52.174 0.00 0.00 0.00 3.86
3586 3797 2.708325 GGAGGTGAGCTTATCCAATCCT 59.292 50.000 0.00 0.00 0.00 3.24
3587 3798 2.708325 AGGAGGTGAGCTTATCCAATCC 59.292 50.000 9.32 6.59 34.08 3.01
3588 3799 4.102367 AGAAGGAGGTGAGCTTATCCAATC 59.898 45.833 9.32 7.33 34.08 2.67
3589 3800 4.043596 AGAAGGAGGTGAGCTTATCCAAT 58.956 43.478 9.32 0.02 34.08 3.16
3590 3801 3.454858 AGAAGGAGGTGAGCTTATCCAA 58.545 45.455 9.32 0.00 34.08 3.53
3591 3802 3.121929 AGAAGGAGGTGAGCTTATCCA 57.878 47.619 9.32 0.00 34.08 3.41
3592 3803 3.006430 GCTAGAAGGAGGTGAGCTTATCC 59.994 52.174 0.00 0.00 0.00 2.59
3593 3804 3.305064 CGCTAGAAGGAGGTGAGCTTATC 60.305 52.174 0.00 0.00 0.00 1.75
3594 3805 2.625790 CGCTAGAAGGAGGTGAGCTTAT 59.374 50.000 0.00 0.00 0.00 1.73
3595 3806 2.025155 CGCTAGAAGGAGGTGAGCTTA 58.975 52.381 0.00 0.00 0.00 3.09
3596 3807 0.820871 CGCTAGAAGGAGGTGAGCTT 59.179 55.000 0.00 0.00 0.00 3.74
3597 3808 0.033991 TCGCTAGAAGGAGGTGAGCT 60.034 55.000 0.00 0.00 0.00 4.09
3598 3809 0.818296 TTCGCTAGAAGGAGGTGAGC 59.182 55.000 0.00 0.00 31.76 4.26
3599 3810 5.473846 TGTATATTCGCTAGAAGGAGGTGAG 59.526 44.000 0.00 0.00 40.09 3.51
3600 3811 5.382616 TGTATATTCGCTAGAAGGAGGTGA 58.617 41.667 0.00 0.00 40.09 4.02
3601 3812 5.707242 TGTATATTCGCTAGAAGGAGGTG 57.293 43.478 0.00 0.00 40.09 4.00
3602 3813 6.726490 TTTGTATATTCGCTAGAAGGAGGT 57.274 37.500 0.00 0.00 40.09 3.85
3603 3814 9.141400 GTTATTTGTATATTCGCTAGAAGGAGG 57.859 37.037 0.00 0.00 40.09 4.30
3604 3815 9.692749 TGTTATTTGTATATTCGCTAGAAGGAG 57.307 33.333 0.00 0.00 40.09 3.69
3605 3816 9.472361 GTGTTATTTGTATATTCGCTAGAAGGA 57.528 33.333 0.00 0.00 40.09 3.36
3606 3817 8.709646 GGTGTTATTTGTATATTCGCTAGAAGG 58.290 37.037 0.00 0.00 40.09 3.46
3607 3818 8.709646 GGGTGTTATTTGTATATTCGCTAGAAG 58.290 37.037 0.00 0.00 40.09 2.85
3608 3819 8.426489 AGGGTGTTATTTGTATATTCGCTAGAA 58.574 33.333 0.00 0.00 41.13 2.10
3609 3820 7.959175 AGGGTGTTATTTGTATATTCGCTAGA 58.041 34.615 0.00 0.00 0.00 2.43
3610 3821 8.603242 AAGGGTGTTATTTGTATATTCGCTAG 57.397 34.615 0.00 0.00 0.00 3.42
3611 3822 8.832521 CAAAGGGTGTTATTTGTATATTCGCTA 58.167 33.333 0.00 0.00 32.86 4.26
3612 3823 7.338449 ACAAAGGGTGTTATTTGTATATTCGCT 59.662 33.333 1.69 0.00 45.31 4.93
3613 3824 7.477494 ACAAAGGGTGTTATTTGTATATTCGC 58.523 34.615 1.69 0.00 45.31 4.70
3620 3831 7.937942 TGCTAAGTACAAAGGGTGTTATTTGTA 59.062 33.333 6.45 6.45 45.31 2.41
3622 3833 7.209471 TGCTAAGTACAAAGGGTGTTATTTG 57.791 36.000 0.00 0.00 41.98 2.32
3623 3834 7.826918 TTGCTAAGTACAAAGGGTGTTATTT 57.173 32.000 0.00 0.00 41.98 1.40
3624 3835 8.417273 AATTGCTAAGTACAAAGGGTGTTATT 57.583 30.769 0.00 0.00 41.98 1.40
3625 3836 7.668052 TGAATTGCTAAGTACAAAGGGTGTTAT 59.332 33.333 0.00 0.00 41.98 1.89
3626 3837 6.999272 TGAATTGCTAAGTACAAAGGGTGTTA 59.001 34.615 0.00 0.00 41.98 2.41
3627 3838 5.830991 TGAATTGCTAAGTACAAAGGGTGTT 59.169 36.000 0.00 0.00 41.98 3.32
3628 3839 5.381757 TGAATTGCTAAGTACAAAGGGTGT 58.618 37.500 0.00 0.00 44.82 4.16
3629 3840 5.106157 CCTGAATTGCTAAGTACAAAGGGTG 60.106 44.000 0.00 0.00 0.00 4.61
3630 3841 5.010282 CCTGAATTGCTAAGTACAAAGGGT 58.990 41.667 0.00 0.00 0.00 4.34
3631 3842 4.399303 CCCTGAATTGCTAAGTACAAAGGG 59.601 45.833 0.00 0.00 36.72 3.95
3632 3843 5.010282 ACCCTGAATTGCTAAGTACAAAGG 58.990 41.667 0.00 0.00 0.00 3.11
3633 3844 6.575162 AACCCTGAATTGCTAAGTACAAAG 57.425 37.500 0.00 0.00 0.00 2.77
3634 3845 7.722285 ACTTAACCCTGAATTGCTAAGTACAAA 59.278 33.333 0.00 0.00 29.99 2.83
3635 3846 7.228590 ACTTAACCCTGAATTGCTAAGTACAA 58.771 34.615 0.00 0.00 29.99 2.41
3636 3847 6.775708 ACTTAACCCTGAATTGCTAAGTACA 58.224 36.000 0.00 0.00 29.99 2.90
3637 3848 7.389607 TGAACTTAACCCTGAATTGCTAAGTAC 59.610 37.037 0.00 0.00 31.21 2.73
3638 3849 7.455058 TGAACTTAACCCTGAATTGCTAAGTA 58.545 34.615 0.00 0.00 31.21 2.24
3639 3850 6.303839 TGAACTTAACCCTGAATTGCTAAGT 58.696 36.000 0.00 0.00 32.41 2.24
3640 3851 6.817765 TGAACTTAACCCTGAATTGCTAAG 57.182 37.500 0.00 0.00 0.00 2.18
3641 3852 6.152661 CCATGAACTTAACCCTGAATTGCTAA 59.847 38.462 0.00 0.00 0.00 3.09
3642 3853 5.652014 CCATGAACTTAACCCTGAATTGCTA 59.348 40.000 0.00 0.00 0.00 3.49
3643 3854 4.463891 CCATGAACTTAACCCTGAATTGCT 59.536 41.667 0.00 0.00 0.00 3.91
3644 3855 4.747810 CCATGAACTTAACCCTGAATTGC 58.252 43.478 0.00 0.00 0.00 3.56
3645 3856 4.463891 AGCCATGAACTTAACCCTGAATTG 59.536 41.667 0.00 0.00 0.00 2.32
3646 3857 4.677182 AGCCATGAACTTAACCCTGAATT 58.323 39.130 0.00 0.00 0.00 2.17
3647 3858 4.018050 AGAGCCATGAACTTAACCCTGAAT 60.018 41.667 0.00 0.00 0.00 2.57
3648 3859 3.330701 AGAGCCATGAACTTAACCCTGAA 59.669 43.478 0.00 0.00 0.00 3.02
3649 3860 2.912956 AGAGCCATGAACTTAACCCTGA 59.087 45.455 0.00 0.00 0.00 3.86
3650 3861 3.356529 AGAGCCATGAACTTAACCCTG 57.643 47.619 0.00 0.00 0.00 4.45
3651 3862 5.250774 TCTTAAGAGCCATGAACTTAACCCT 59.749 40.000 0.00 0.00 34.11 4.34
3652 3863 5.497474 TCTTAAGAGCCATGAACTTAACCC 58.503 41.667 0.00 0.00 34.11 4.11
3653 3864 5.586643 CCTCTTAAGAGCCATGAACTTAACC 59.413 44.000 24.58 0.00 40.75 2.85
3654 3865 6.174049 ACCTCTTAAGAGCCATGAACTTAAC 58.826 40.000 24.58 0.00 40.75 2.01
3655 3866 6.374417 ACCTCTTAAGAGCCATGAACTTAA 57.626 37.500 24.58 6.54 40.75 1.85
3656 3867 5.104900 GGACCTCTTAAGAGCCATGAACTTA 60.105 44.000 24.58 0.00 40.75 2.24
3657 3868 4.323868 GGACCTCTTAAGAGCCATGAACTT 60.324 45.833 24.58 0.00 40.75 2.66
3658 3869 3.198853 GGACCTCTTAAGAGCCATGAACT 59.801 47.826 24.58 0.00 40.75 3.01
3659 3870 3.536570 GGACCTCTTAAGAGCCATGAAC 58.463 50.000 24.58 11.43 40.75 3.18
3660 3871 2.168521 CGGACCTCTTAAGAGCCATGAA 59.831 50.000 24.58 0.00 40.75 2.57
3661 3872 1.757118 CGGACCTCTTAAGAGCCATGA 59.243 52.381 24.58 0.00 40.75 3.07
3662 3873 1.482593 ACGGACCTCTTAAGAGCCATG 59.517 52.381 24.58 16.29 40.75 3.66
3663 3874 1.867363 ACGGACCTCTTAAGAGCCAT 58.133 50.000 24.58 13.23 40.75 4.40
3664 3875 1.549170 GAACGGACCTCTTAAGAGCCA 59.451 52.381 24.58 0.00 40.75 4.75
3665 3876 1.549170 TGAACGGACCTCTTAAGAGCC 59.451 52.381 24.58 19.65 40.75 4.70
3666 3877 2.231721 AGTGAACGGACCTCTTAAGAGC 59.768 50.000 24.58 13.17 40.75 4.09
3667 3878 5.048224 TGTTAGTGAACGGACCTCTTAAGAG 60.048 44.000 23.31 23.31 38.51 2.85
3668 3879 4.828939 TGTTAGTGAACGGACCTCTTAAGA 59.171 41.667 4.81 4.81 38.51 2.10
3669 3880 5.130292 TGTTAGTGAACGGACCTCTTAAG 57.870 43.478 0.00 0.00 38.51 1.85
3670 3881 5.302568 TCTTGTTAGTGAACGGACCTCTTAA 59.697 40.000 0.00 0.00 38.51 1.85
3671 3882 4.828939 TCTTGTTAGTGAACGGACCTCTTA 59.171 41.667 0.00 0.00 38.51 2.10
3672 3883 3.640029 TCTTGTTAGTGAACGGACCTCTT 59.360 43.478 0.00 0.00 38.51 2.85
3673 3884 3.228453 TCTTGTTAGTGAACGGACCTCT 58.772 45.455 0.00 0.00 38.51 3.69
3674 3885 3.655276 TCTTGTTAGTGAACGGACCTC 57.345 47.619 0.00 0.00 38.51 3.85
3675 3886 4.202326 ACATTCTTGTTAGTGAACGGACCT 60.202 41.667 0.00 0.00 38.51 3.85
3676 3887 4.062991 ACATTCTTGTTAGTGAACGGACC 58.937 43.478 0.00 0.00 38.51 4.46
3677 3888 4.748102 TGACATTCTTGTTAGTGAACGGAC 59.252 41.667 0.00 0.00 38.51 4.79
3678 3889 4.951254 TGACATTCTTGTTAGTGAACGGA 58.049 39.130 0.00 0.00 38.51 4.69
3679 3890 4.377431 GCTGACATTCTTGTTAGTGAACGG 60.377 45.833 0.77 0.00 40.60 4.44
3680 3891 4.377431 GGCTGACATTCTTGTTAGTGAACG 60.377 45.833 0.77 0.00 40.60 3.95
3681 3892 4.757149 AGGCTGACATTCTTGTTAGTGAAC 59.243 41.667 0.00 0.00 40.60 3.18
3682 3893 4.973168 AGGCTGACATTCTTGTTAGTGAA 58.027 39.130 0.00 0.00 40.60 3.18
3683 3894 4.569943 GAGGCTGACATTCTTGTTAGTGA 58.430 43.478 0.00 0.00 40.60 3.41
3684 3895 3.369147 CGAGGCTGACATTCTTGTTAGTG 59.631 47.826 0.00 0.00 40.60 2.74
3685 3896 3.589988 CGAGGCTGACATTCTTGTTAGT 58.410 45.455 0.00 0.00 40.60 2.24
3686 3897 2.349886 GCGAGGCTGACATTCTTGTTAG 59.650 50.000 0.00 0.00 41.23 2.34
3687 3898 2.289382 TGCGAGGCTGACATTCTTGTTA 60.289 45.455 0.00 0.00 35.79 2.41
3688 3899 1.160137 GCGAGGCTGACATTCTTGTT 58.840 50.000 0.00 0.00 35.79 2.83
3689 3900 0.035317 TGCGAGGCTGACATTCTTGT 59.965 50.000 0.00 0.00 39.32 3.16
3690 3901 0.445436 GTGCGAGGCTGACATTCTTG 59.555 55.000 0.00 0.00 0.00 3.02
3691 3902 0.035317 TGTGCGAGGCTGACATTCTT 59.965 50.000 0.00 0.00 0.00 2.52
3692 3903 0.671781 GTGTGCGAGGCTGACATTCT 60.672 55.000 0.00 0.00 0.00 2.40
3693 3904 0.950555 TGTGTGCGAGGCTGACATTC 60.951 55.000 0.00 0.00 0.00 2.67
3694 3905 0.321919 ATGTGTGCGAGGCTGACATT 60.322 50.000 0.00 0.00 30.88 2.71
3695 3906 0.321919 AATGTGTGCGAGGCTGACAT 60.322 50.000 0.00 0.00 34.38 3.06
3696 3907 0.534877 AAATGTGTGCGAGGCTGACA 60.535 50.000 0.00 0.00 0.00 3.58
3697 3908 0.110056 CAAATGTGTGCGAGGCTGAC 60.110 55.000 0.00 0.00 0.00 3.51
3698 3909 1.855213 GCAAATGTGTGCGAGGCTGA 61.855 55.000 0.00 0.00 34.21 4.26
3699 3910 1.443194 GCAAATGTGTGCGAGGCTG 60.443 57.895 0.00 0.00 34.21 4.85
3700 3911 2.956987 GCAAATGTGTGCGAGGCT 59.043 55.556 0.00 0.00 34.21 4.58
3706 3917 1.990563 GCATGAAGAGCAAATGTGTGC 59.009 47.619 0.00 0.00 45.28 4.57
3707 3918 2.029739 TGGCATGAAGAGCAAATGTGTG 60.030 45.455 0.00 0.00 0.00 3.82
3708 3919 2.241160 TGGCATGAAGAGCAAATGTGT 58.759 42.857 0.00 0.00 0.00 3.72
3709 3920 3.250744 CTTGGCATGAAGAGCAAATGTG 58.749 45.455 0.00 0.00 0.00 3.21
3710 3921 2.895404 ACTTGGCATGAAGAGCAAATGT 59.105 40.909 7.45 0.00 0.00 2.71
3711 3922 3.587797 ACTTGGCATGAAGAGCAAATG 57.412 42.857 7.45 0.00 0.00 2.32
3712 3923 4.081406 TGTACTTGGCATGAAGAGCAAAT 58.919 39.130 7.45 0.00 0.00 2.32
3713 3924 3.485394 TGTACTTGGCATGAAGAGCAAA 58.515 40.909 7.45 0.00 0.00 3.68
3714 3925 3.076621 CTGTACTTGGCATGAAGAGCAA 58.923 45.455 7.45 0.00 0.00 3.91
3715 3926 2.302733 TCTGTACTTGGCATGAAGAGCA 59.697 45.455 7.45 0.00 0.00 4.26
3716 3927 2.977914 TCTGTACTTGGCATGAAGAGC 58.022 47.619 7.45 0.00 0.00 4.09
3717 3928 6.344500 ACTTATCTGTACTTGGCATGAAGAG 58.656 40.000 7.45 0.00 0.00 2.85
3718 3929 6.299805 ACTTATCTGTACTTGGCATGAAGA 57.700 37.500 7.45 7.36 0.00 2.87
3719 3930 6.992063 AACTTATCTGTACTTGGCATGAAG 57.008 37.500 7.45 0.00 0.00 3.02
3720 3931 7.119699 CAGAAACTTATCTGTACTTGGCATGAA 59.880 37.037 7.45 0.00 41.54 2.57
3721 3932 6.595326 CAGAAACTTATCTGTACTTGGCATGA 59.405 38.462 7.45 0.00 41.54 3.07
3722 3933 6.595326 TCAGAAACTTATCTGTACTTGGCATG 59.405 38.462 4.41 0.00 45.65 4.06
3723 3934 6.595716 GTCAGAAACTTATCTGTACTTGGCAT 59.404 38.462 4.41 0.00 45.65 4.40
3724 3935 5.932303 GTCAGAAACTTATCTGTACTTGGCA 59.068 40.000 4.41 0.00 45.65 4.92
3725 3936 5.932303 TGTCAGAAACTTATCTGTACTTGGC 59.068 40.000 4.41 0.00 45.65 4.52
3726 3937 9.307121 CTATGTCAGAAACTTATCTGTACTTGG 57.693 37.037 4.41 0.45 45.65 3.61
3729 3940 8.410141 GCTCTATGTCAGAAACTTATCTGTACT 58.590 37.037 4.41 0.00 45.65 2.73
3730 3941 8.410141 AGCTCTATGTCAGAAACTTATCTGTAC 58.590 37.037 4.41 0.00 45.65 2.90
3731 3942 8.409371 CAGCTCTATGTCAGAAACTTATCTGTA 58.591 37.037 4.41 0.00 45.65 2.74
3732 3943 7.123397 TCAGCTCTATGTCAGAAACTTATCTGT 59.877 37.037 4.41 0.00 45.65 3.41
3733 3944 7.434897 GTCAGCTCTATGTCAGAAACTTATCTG 59.565 40.741 0.00 0.00 46.62 2.90
3734 3945 7.341769 AGTCAGCTCTATGTCAGAAACTTATCT 59.658 37.037 0.00 0.00 31.12 1.98
3735 3946 7.488322 AGTCAGCTCTATGTCAGAAACTTATC 58.512 38.462 0.00 0.00 31.12 1.75
3736 3947 7.416964 AGTCAGCTCTATGTCAGAAACTTAT 57.583 36.000 0.00 0.00 31.12 1.73
3737 3948 6.842437 AGTCAGCTCTATGTCAGAAACTTA 57.158 37.500 0.00 0.00 31.12 2.24
3738 3949 5.736951 AGTCAGCTCTATGTCAGAAACTT 57.263 39.130 0.00 0.00 31.12 2.66
3739 3950 5.163561 GCTAGTCAGCTCTATGTCAGAAACT 60.164 44.000 0.00 0.00 44.93 2.66
3740 3951 5.040635 GCTAGTCAGCTCTATGTCAGAAAC 58.959 45.833 0.00 0.00 44.93 2.78
3741 3952 5.255710 GCTAGTCAGCTCTATGTCAGAAA 57.744 43.478 0.00 0.00 44.93 2.52
3742 3953 4.909696 GCTAGTCAGCTCTATGTCAGAA 57.090 45.455 0.00 0.00 44.93 3.02
3759 3970 3.067461 GTGGTGACTAGTCCATGAGCTAG 59.933 52.174 20.11 16.72 40.21 3.42
3760 3971 3.024547 GTGGTGACTAGTCCATGAGCTA 58.975 50.000 20.11 0.00 36.09 3.32
3761 3972 1.827969 GTGGTGACTAGTCCATGAGCT 59.172 52.381 20.11 0.00 36.09 4.09
3762 3973 1.550524 TGTGGTGACTAGTCCATGAGC 59.449 52.381 20.11 11.25 36.09 4.26
3763 3974 3.961480 TTGTGGTGACTAGTCCATGAG 57.039 47.619 20.11 0.00 36.09 2.90
3764 3975 4.908601 AATTGTGGTGACTAGTCCATGA 57.091 40.909 20.11 5.98 36.09 3.07
3765 3976 5.586243 CCTAAATTGTGGTGACTAGTCCATG 59.414 44.000 20.11 0.00 36.09 3.66
3766 3977 5.487488 TCCTAAATTGTGGTGACTAGTCCAT 59.513 40.000 20.11 0.17 36.09 3.41
3767 3978 4.841813 TCCTAAATTGTGGTGACTAGTCCA 59.158 41.667 20.11 9.79 0.00 4.02
3768 3979 5.416271 TCCTAAATTGTGGTGACTAGTCC 57.584 43.478 20.11 11.08 0.00 3.85
3769 3980 7.494952 GGTATTCCTAAATTGTGGTGACTAGTC 59.505 40.741 16.32 16.32 0.00 2.59
3770 3981 7.037873 TGGTATTCCTAAATTGTGGTGACTAGT 60.038 37.037 0.00 0.00 34.23 2.57
3771 3982 7.335627 TGGTATTCCTAAATTGTGGTGACTAG 58.664 38.462 0.00 0.00 34.23 2.57
3772 3983 7.260387 TGGTATTCCTAAATTGTGGTGACTA 57.740 36.000 0.00 0.00 34.23 2.59
3773 3984 6.134535 TGGTATTCCTAAATTGTGGTGACT 57.865 37.500 0.00 0.00 34.23 3.41
3774 3985 5.163652 GCTGGTATTCCTAAATTGTGGTGAC 60.164 44.000 0.00 0.00 34.23 3.67
3775 3986 4.947388 GCTGGTATTCCTAAATTGTGGTGA 59.053 41.667 0.00 0.00 34.23 4.02
3776 3987 4.097892 GGCTGGTATTCCTAAATTGTGGTG 59.902 45.833 0.00 0.00 34.23 4.17
3777 3988 4.264172 TGGCTGGTATTCCTAAATTGTGGT 60.264 41.667 0.00 0.00 34.23 4.16
3778 3989 4.277476 TGGCTGGTATTCCTAAATTGTGG 58.723 43.478 0.00 0.00 34.23 4.17
3779 3990 4.202050 GCTGGCTGGTATTCCTAAATTGTG 60.202 45.833 0.00 0.00 34.23 3.33
3780 3991 3.954258 GCTGGCTGGTATTCCTAAATTGT 59.046 43.478 0.00 0.00 34.23 2.71
3781 3992 3.319122 GGCTGGCTGGTATTCCTAAATTG 59.681 47.826 0.00 0.00 34.23 2.32
3782 3993 3.052944 TGGCTGGCTGGTATTCCTAAATT 60.053 43.478 2.00 0.00 34.23 1.82
3783 3994 2.513738 TGGCTGGCTGGTATTCCTAAAT 59.486 45.455 2.00 0.00 34.23 1.40
3784 3995 1.919654 TGGCTGGCTGGTATTCCTAAA 59.080 47.619 2.00 0.00 34.23 1.85
3785 3996 1.590591 TGGCTGGCTGGTATTCCTAA 58.409 50.000 2.00 0.00 34.23 2.69
3786 3997 1.590591 TTGGCTGGCTGGTATTCCTA 58.409 50.000 2.00 0.00 34.23 2.94
3787 3998 0.704076 TTTGGCTGGCTGGTATTCCT 59.296 50.000 2.00 0.00 34.23 3.36
3788 3999 1.555967 TTTTGGCTGGCTGGTATTCC 58.444 50.000 2.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.