Multiple sequence alignment - TraesCS4B01G264100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G264100 chr4B 100.000 6287 0 0 1 6287 535045217 535051503 0.000000e+00 11611.0
1 TraesCS4B01G264100 chr4B 81.875 160 28 1 2044 2202 558045251 558045410 3.950000e-27 134.0
2 TraesCS4B01G264100 chr4D 90.796 2651 141 51 2944 5568 434976890 434979463 0.000000e+00 3448.0
3 TraesCS4B01G264100 chr4D 93.984 881 24 6 533 1407 434974519 434975376 0.000000e+00 1306.0
4 TraesCS4B01G264100 chr4D 90.249 441 14 10 1527 1938 434975526 434975966 3.310000e-152 549.0
5 TraesCS4B01G264100 chr4D 89.552 335 23 7 2445 2769 434976385 434976717 1.260000e-111 414.0
6 TraesCS4B01G264100 chr4D 97.990 199 4 0 2052 2250 434976151 434976349 4.670000e-91 346.0
7 TraesCS4B01G264100 chr4D 90.777 206 19 0 1 206 353542096 353542301 6.210000e-70 276.0
8 TraesCS4B01G264100 chr4D 81.298 262 33 5 3558 3818 438378907 438379153 1.380000e-46 198.0
9 TraesCS4B01G264100 chr4D 81.250 160 30 0 2043 2202 446138437 446138596 5.110000e-26 130.0
10 TraesCS4B01G264100 chr4A 93.876 1143 43 16 4435 5568 36372699 36373823 0.000000e+00 1698.0
11 TraesCS4B01G264100 chr4A 87.825 1462 71 37 535 1938 36368567 36369979 0.000000e+00 1615.0
12 TraesCS4B01G264100 chr4A 90.381 1102 46 35 3351 4432 36371602 36372663 0.000000e+00 1393.0
13 TraesCS4B01G264100 chr4A 89.337 347 28 8 2442 2782 36370567 36370910 1.620000e-115 427.0
14 TraesCS4B01G264100 chr4A 86.562 320 24 11 2050 2350 36370052 36370371 1.010000e-87 335.0
15 TraesCS4B01G264100 chr4A 85.127 316 47 0 4107 4422 380152424 380152109 2.190000e-84 324.0
16 TraesCS4B01G264100 chr4A 89.796 147 9 6 215 357 36367957 36368101 3.870000e-42 183.0
17 TraesCS4B01G264100 chr4A 82.468 154 27 0 2049 2202 21219408 21219255 1.100000e-27 135.0
18 TraesCS4B01G264100 chr4A 81.699 153 20 6 268 413 625979084 625979235 3.080000e-23 121.0
19 TraesCS4B01G264100 chr4A 89.744 78 8 0 384 461 36368289 36368366 4.010000e-17 100.0
20 TraesCS4B01G264100 chr6A 86.329 1185 106 26 4335 5491 483930073 483931229 0.000000e+00 1240.0
21 TraesCS4B01G264100 chr6A 85.799 1183 109 30 4338 5491 272560389 272559237 0.000000e+00 1199.0
22 TraesCS4B01G264100 chr2A 86.041 1182 117 25 4338 5491 239897035 239895874 0.000000e+00 1225.0
23 TraesCS4B01G264100 chr2A 80.952 147 19 3 282 426 413390270 413390131 2.400000e-19 108.0
24 TraesCS4B01G264100 chr2A 91.489 47 2 2 2384 2428 151266704 151266658 5.260000e-06 63.9
25 TraesCS4B01G264100 chr6D 94.153 667 33 5 5626 6287 45410952 45411617 0.000000e+00 1011.0
26 TraesCS4B01G264100 chr6D 90.000 210 21 0 1 210 187256641 187256850 8.030000e-69 272.0
27 TraesCS4B01G264100 chr6D 90.000 210 21 0 1 210 436428163 436428372 8.030000e-69 272.0
28 TraesCS4B01G264100 chr7A 94.127 664 33 4 5630 6287 275967916 275967253 0.000000e+00 1005.0
29 TraesCS4B01G264100 chr7A 93.884 654 35 4 5639 6287 198647968 198647315 0.000000e+00 981.0
30 TraesCS4B01G264100 chr7A 78.343 1436 222 51 3558 4964 11754271 11755646 0.000000e+00 846.0
31 TraesCS4B01G264100 chr1D 93.853 667 29 9 5626 6287 136946822 136946163 0.000000e+00 994.0
32 TraesCS4B01G264100 chr1D 90.821 207 19 0 4 210 162720537 162720331 1.730000e-70 278.0
33 TraesCS4B01G264100 chr1D 90.338 207 20 0 4 210 297541102 297540896 8.030000e-69 272.0
34 TraesCS4B01G264100 chr3D 93.807 662 35 5 5631 6287 516080124 516079464 0.000000e+00 990.0
35 TraesCS4B01G264100 chr3D 91.304 207 18 0 4 210 599364709 599364503 3.710000e-72 283.0
36 TraesCS4B01G264100 chr3D 97.619 42 1 0 286 327 464323226 464323185 8.740000e-09 73.1
37 TraesCS4B01G264100 chr3D 93.182 44 3 0 2382 2425 81695008 81695051 1.460000e-06 65.8
38 TraesCS4B01G264100 chr1B 93.656 662 36 4 5632 6287 532523639 532524300 0.000000e+00 985.0
39 TraesCS4B01G264100 chr7D 93.062 663 36 6 5630 6287 579332276 579331619 0.000000e+00 961.0
40 TraesCS4B01G264100 chr7D 78.756 1431 214 49 3558 4962 12305108 12306474 0.000000e+00 876.0
41 TraesCS4B01G264100 chr7D 97.436 39 1 0 2387 2425 610532069 610532107 4.070000e-07 67.6
42 TraesCS4B01G264100 chr2B 93.062 663 35 10 5632 6287 777139480 777138822 0.000000e+00 959.0
43 TraesCS4B01G264100 chr2B 92.424 198 15 0 9 206 740848067 740848264 3.710000e-72 283.0
44 TraesCS4B01G264100 chr2B 81.707 164 25 4 268 426 386104275 386104438 1.420000e-26 132.0
45 TraesCS4B01G264100 chr2B 97.500 40 1 0 2386 2425 768775637 768775676 1.130000e-07 69.4
46 TraesCS4B01G264100 chr5B 92.771 664 40 7 5630 6287 461616005 461616666 0.000000e+00 953.0
47 TraesCS4B01G264100 chr5B 79.412 136 17 7 280 414 559212142 559212017 1.120000e-12 86.1
48 TraesCS4B01G264100 chr1A 84.421 475 58 10 4596 5070 432592110 432591652 2.670000e-123 453.0
49 TraesCS4B01G264100 chr1A 81.720 93 9 4 297 385 363689315 363689227 3.140000e-08 71.3
50 TraesCS4B01G264100 chr5D 83.910 491 57 15 4596 5086 366753172 366753640 3.460000e-122 449.0
51 TraesCS4B01G264100 chr5D 83.503 491 60 14 4596 5086 365179782 365180251 7.480000e-119 438.0
52 TraesCS4B01G264100 chr5D 90.476 210 20 0 1 210 245720779 245720988 1.730000e-70 278.0
53 TraesCS4B01G264100 chr5D 91.133 203 18 0 4 206 432501956 432501754 6.210000e-70 276.0
54 TraesCS4B01G264100 chr7B 93.182 308 16 3 2047 2349 59281792 59281485 1.240000e-121 448.0
55 TraesCS4B01G264100 chr7B 90.244 123 7 3 1843 1960 59282076 59281954 8.440000e-34 156.0
56 TraesCS4B01G264100 chr2D 79.096 177 24 11 260 426 138246461 138246634 6.660000e-20 110.0
57 TraesCS4B01G264100 chr5A 77.037 135 25 6 268 398 597792672 597792804 8.740000e-09 73.1
58 TraesCS4B01G264100 chr3A 100.000 37 0 0 2389 2425 10358655 10358619 1.130000e-07 69.4
59 TraesCS4B01G264100 chrUn 93.023 43 3 0 2386 2428 315281815 315281773 5.260000e-06 63.9
60 TraesCS4B01G264100 chrUn 95.000 40 2 0 2386 2425 327316928 327316967 5.260000e-06 63.9
61 TraesCS4B01G264100 chrUn 93.023 43 3 0 2386 2428 376491866 376491824 5.260000e-06 63.9
62 TraesCS4B01G264100 chrUn 95.000 40 2 0 2386 2425 399401218 399401257 5.260000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G264100 chr4B 535045217 535051503 6286 False 11611.000000 11611 100.000000 1 6287 1 chr4B.!!$F1 6286
1 TraesCS4B01G264100 chr4D 434974519 434979463 4944 False 1212.600000 3448 92.514200 533 5568 5 chr4D.!!$F4 5035
2 TraesCS4B01G264100 chr4A 36367957 36373823 5866 False 821.571429 1698 89.645857 215 5568 7 chr4A.!!$F2 5353
3 TraesCS4B01G264100 chr6A 483930073 483931229 1156 False 1240.000000 1240 86.329000 4335 5491 1 chr6A.!!$F1 1156
4 TraesCS4B01G264100 chr6A 272559237 272560389 1152 True 1199.000000 1199 85.799000 4338 5491 1 chr6A.!!$R1 1153
5 TraesCS4B01G264100 chr2A 239895874 239897035 1161 True 1225.000000 1225 86.041000 4338 5491 1 chr2A.!!$R2 1153
6 TraesCS4B01G264100 chr6D 45410952 45411617 665 False 1011.000000 1011 94.153000 5626 6287 1 chr6D.!!$F1 661
7 TraesCS4B01G264100 chr7A 275967253 275967916 663 True 1005.000000 1005 94.127000 5630 6287 1 chr7A.!!$R2 657
8 TraesCS4B01G264100 chr7A 198647315 198647968 653 True 981.000000 981 93.884000 5639 6287 1 chr7A.!!$R1 648
9 TraesCS4B01G264100 chr7A 11754271 11755646 1375 False 846.000000 846 78.343000 3558 4964 1 chr7A.!!$F1 1406
10 TraesCS4B01G264100 chr1D 136946163 136946822 659 True 994.000000 994 93.853000 5626 6287 1 chr1D.!!$R1 661
11 TraesCS4B01G264100 chr3D 516079464 516080124 660 True 990.000000 990 93.807000 5631 6287 1 chr3D.!!$R2 656
12 TraesCS4B01G264100 chr1B 532523639 532524300 661 False 985.000000 985 93.656000 5632 6287 1 chr1B.!!$F1 655
13 TraesCS4B01G264100 chr7D 579331619 579332276 657 True 961.000000 961 93.062000 5630 6287 1 chr7D.!!$R1 657
14 TraesCS4B01G264100 chr7D 12305108 12306474 1366 False 876.000000 876 78.756000 3558 4962 1 chr7D.!!$F1 1404
15 TraesCS4B01G264100 chr2B 777138822 777139480 658 True 959.000000 959 93.062000 5632 6287 1 chr2B.!!$R1 655
16 TraesCS4B01G264100 chr5B 461616005 461616666 661 False 953.000000 953 92.771000 5630 6287 1 chr5B.!!$F1 657
17 TraesCS4B01G264100 chr7B 59281485 59282076 591 True 302.000000 448 91.713000 1843 2349 2 chr7B.!!$R1 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
505 669 0.109723 GGGTCACACTGGCTGGTTTA 59.890 55.0 0.00 0.0 0.00 2.01 F
2289 2809 0.107643 TTCACTGTGCGGATTCCACA 59.892 50.0 2.12 0.0 40.61 4.17 F
2780 3450 0.109781 CCATAACACAAGGCACACGC 60.110 55.0 0.00 0.0 37.44 5.34 F
2783 3453 0.179070 TAACACAAGGCACACGCAGA 60.179 50.0 0.00 0.0 41.24 4.26 F
3841 4698 0.179192 TCATCACGCGCAAATTCAGC 60.179 50.0 5.73 0.0 0.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2438 2970 0.036765 GTGTGGTATCGGTGCCTGAA 60.037 55.000 3.88 0.00 0.00 3.02 R
3848 4705 0.101399 TTCGCCGTGCAAACAAACAT 59.899 45.000 0.00 0.00 0.00 2.71 R
3928 4792 1.751351 TCTGATCGTGGCGAAAGATCT 59.249 47.619 13.69 0.00 42.41 2.75 R
4071 4935 2.155155 GTCCGTCAGACACATTTCGTTC 59.845 50.000 0.41 0.00 45.55 3.95 R
5575 6517 0.106918 TATCCAACGGCCCATGGTTC 60.107 55.000 18.44 1.51 37.94 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.670077 GATAAAGGACACATTGAGGACTTC 57.330 41.667 0.00 0.00 0.00 3.01
24 25 3.425162 AAGGACACATTGAGGACTTCC 57.575 47.619 0.00 0.00 0.00 3.46
25 26 2.338809 AGGACACATTGAGGACTTCCA 58.661 47.619 0.00 0.00 38.89 3.53
26 27 2.915604 AGGACACATTGAGGACTTCCAT 59.084 45.455 0.00 0.00 38.89 3.41
27 28 3.012518 GGACACATTGAGGACTTCCATG 58.987 50.000 0.00 0.00 38.89 3.66
28 29 2.421424 GACACATTGAGGACTTCCATGC 59.579 50.000 0.00 0.00 38.89 4.06
29 30 1.747355 CACATTGAGGACTTCCATGCC 59.253 52.381 0.00 0.00 38.89 4.40
30 31 1.355381 ACATTGAGGACTTCCATGCCA 59.645 47.619 0.00 0.00 38.89 4.92
31 32 2.225091 ACATTGAGGACTTCCATGCCAA 60.225 45.455 0.00 0.00 38.89 4.52
32 33 2.905415 TTGAGGACTTCCATGCCAAT 57.095 45.000 0.00 0.00 38.89 3.16
33 34 2.905415 TGAGGACTTCCATGCCAATT 57.095 45.000 0.00 0.00 38.89 2.32
34 35 2.726821 TGAGGACTTCCATGCCAATTC 58.273 47.619 0.00 0.00 38.89 2.17
35 36 2.027385 GAGGACTTCCATGCCAATTCC 58.973 52.381 0.00 4.64 38.89 3.01
36 37 1.642762 AGGACTTCCATGCCAATTCCT 59.357 47.619 8.10 8.10 38.89 3.36
37 38 2.027385 GGACTTCCATGCCAATTCCTC 58.973 52.381 5.30 0.00 35.64 3.71
38 39 2.357569 GGACTTCCATGCCAATTCCTCT 60.358 50.000 5.30 0.00 35.64 3.69
39 40 3.359950 GACTTCCATGCCAATTCCTCTT 58.640 45.455 0.00 0.00 0.00 2.85
40 41 4.526970 GACTTCCATGCCAATTCCTCTTA 58.473 43.478 0.00 0.00 0.00 2.10
41 42 4.934356 ACTTCCATGCCAATTCCTCTTAA 58.066 39.130 0.00 0.00 0.00 1.85
42 43 5.522641 ACTTCCATGCCAATTCCTCTTAAT 58.477 37.500 0.00 0.00 0.00 1.40
43 44 6.672593 ACTTCCATGCCAATTCCTCTTAATA 58.327 36.000 0.00 0.00 0.00 0.98
44 45 7.125391 ACTTCCATGCCAATTCCTCTTAATAA 58.875 34.615 0.00 0.00 0.00 1.40
45 46 7.286316 ACTTCCATGCCAATTCCTCTTAATAAG 59.714 37.037 0.00 0.00 0.00 1.73
46 47 6.070656 TCCATGCCAATTCCTCTTAATAAGG 58.929 40.000 0.00 0.00 35.05 2.69
47 48 5.835280 CCATGCCAATTCCTCTTAATAAGGT 59.165 40.000 0.00 0.00 35.29 3.50
48 49 6.324770 CCATGCCAATTCCTCTTAATAAGGTT 59.675 38.462 0.00 0.00 35.29 3.50
49 50 7.505585 CCATGCCAATTCCTCTTAATAAGGTTA 59.494 37.037 0.00 0.00 35.29 2.85
50 51 9.082313 CATGCCAATTCCTCTTAATAAGGTTAT 57.918 33.333 0.00 0.00 35.29 1.89
74 75 8.804688 ATATTTAGTAAGAATGACTCTGCGAC 57.195 34.615 0.00 0.00 33.37 5.19
75 76 3.138205 AGTAAGAATGACTCTGCGACG 57.862 47.619 0.00 0.00 33.37 5.12
76 77 2.747989 AGTAAGAATGACTCTGCGACGA 59.252 45.455 0.00 0.00 33.37 4.20
77 78 2.724977 AAGAATGACTCTGCGACGAA 57.275 45.000 0.00 0.00 33.37 3.85
78 79 2.270275 AGAATGACTCTGCGACGAAG 57.730 50.000 0.00 0.00 31.12 3.79
79 80 1.813178 AGAATGACTCTGCGACGAAGA 59.187 47.619 5.20 5.20 31.12 2.87
80 81 2.425312 AGAATGACTCTGCGACGAAGAT 59.575 45.455 5.87 0.00 31.12 2.40
81 82 3.628032 AGAATGACTCTGCGACGAAGATA 59.372 43.478 5.87 0.00 31.12 1.98
82 83 2.826979 TGACTCTGCGACGAAGATAC 57.173 50.000 5.87 4.36 0.00 2.24
83 84 1.400846 TGACTCTGCGACGAAGATACC 59.599 52.381 5.87 0.00 0.00 2.73
84 85 1.400846 GACTCTGCGACGAAGATACCA 59.599 52.381 5.87 0.00 0.00 3.25
85 86 2.025155 ACTCTGCGACGAAGATACCAT 58.975 47.619 5.87 0.00 0.00 3.55
86 87 2.223595 ACTCTGCGACGAAGATACCATG 60.224 50.000 5.87 0.00 0.00 3.66
87 88 0.855349 CTGCGACGAAGATACCATGC 59.145 55.000 0.00 0.00 0.00 4.06
88 89 0.869880 TGCGACGAAGATACCATGCG 60.870 55.000 0.00 0.00 0.00 4.73
89 90 0.594028 GCGACGAAGATACCATGCGA 60.594 55.000 0.00 0.00 0.00 5.10
90 91 1.835121 CGACGAAGATACCATGCGAA 58.165 50.000 0.00 0.00 0.00 4.70
91 92 1.781429 CGACGAAGATACCATGCGAAG 59.219 52.381 0.00 0.00 0.00 3.79
92 93 2.540973 CGACGAAGATACCATGCGAAGA 60.541 50.000 0.00 0.00 0.00 2.87
93 94 3.643763 GACGAAGATACCATGCGAAGAT 58.356 45.455 0.00 0.00 0.00 2.40
94 95 4.051922 GACGAAGATACCATGCGAAGATT 58.948 43.478 0.00 0.00 0.00 2.40
95 96 4.442706 ACGAAGATACCATGCGAAGATTT 58.557 39.130 0.00 0.00 0.00 2.17
96 97 4.876107 ACGAAGATACCATGCGAAGATTTT 59.124 37.500 0.00 0.00 0.00 1.82
97 98 6.046593 ACGAAGATACCATGCGAAGATTTTA 58.953 36.000 0.00 0.00 0.00 1.52
98 99 6.706270 ACGAAGATACCATGCGAAGATTTTAT 59.294 34.615 0.00 0.00 0.00 1.40
99 100 7.870954 ACGAAGATACCATGCGAAGATTTTATA 59.129 33.333 0.00 0.00 0.00 0.98
100 101 8.162880 CGAAGATACCATGCGAAGATTTTATAC 58.837 37.037 0.00 0.00 0.00 1.47
101 102 9.209175 GAAGATACCATGCGAAGATTTTATACT 57.791 33.333 0.00 0.00 0.00 2.12
102 103 9.561069 AAGATACCATGCGAAGATTTTATACTT 57.439 29.630 0.00 0.00 0.00 2.24
106 107 8.958119 ACCATGCGAAGATTTTATACTTAAGA 57.042 30.769 10.09 0.00 0.00 2.10
107 108 9.046296 ACCATGCGAAGATTTTATACTTAAGAG 57.954 33.333 10.09 0.00 0.00 2.85
108 109 8.499162 CCATGCGAAGATTTTATACTTAAGAGG 58.501 37.037 10.09 0.00 0.00 3.69
109 110 7.478520 TGCGAAGATTTTATACTTAAGAGGC 57.521 36.000 10.09 0.00 0.00 4.70
110 111 7.045416 TGCGAAGATTTTATACTTAAGAGGCA 58.955 34.615 10.09 0.00 0.00 4.75
111 112 7.715249 TGCGAAGATTTTATACTTAAGAGGCAT 59.285 33.333 10.09 0.00 0.00 4.40
112 113 8.224437 GCGAAGATTTTATACTTAAGAGGCATC 58.776 37.037 10.09 0.00 0.00 3.91
113 114 9.482627 CGAAGATTTTATACTTAAGAGGCATCT 57.517 33.333 10.09 0.00 37.39 2.90
121 122 9.988815 TTATACTTAAGAGGCATCTTCATCTTC 57.011 33.333 18.24 0.00 42.25 2.87
122 123 5.679601 ACTTAAGAGGCATCTTCATCTTCC 58.320 41.667 18.24 0.00 42.25 3.46
123 124 5.190528 ACTTAAGAGGCATCTTCATCTTCCA 59.809 40.000 18.24 0.00 42.25 3.53
124 125 3.842007 AGAGGCATCTTCATCTTCCAG 57.158 47.619 0.00 0.00 28.57 3.86
125 126 3.382278 AGAGGCATCTTCATCTTCCAGA 58.618 45.455 0.00 0.00 28.57 3.86
126 127 3.975312 AGAGGCATCTTCATCTTCCAGAT 59.025 43.478 0.00 0.00 30.15 2.90
127 128 4.040706 AGAGGCATCTTCATCTTCCAGATC 59.959 45.833 0.00 0.00 28.22 2.75
128 129 3.975312 AGGCATCTTCATCTTCCAGATCT 59.025 43.478 0.00 0.00 31.32 2.75
129 130 4.412858 AGGCATCTTCATCTTCCAGATCTT 59.587 41.667 0.00 0.00 31.32 2.40
130 131 4.756135 GGCATCTTCATCTTCCAGATCTTC 59.244 45.833 0.00 0.00 31.32 2.87
131 132 5.455040 GGCATCTTCATCTTCCAGATCTTCT 60.455 44.000 0.00 0.00 31.32 2.85
132 133 6.056884 GCATCTTCATCTTCCAGATCTTCTT 58.943 40.000 0.00 0.00 31.32 2.52
133 134 6.017770 GCATCTTCATCTTCCAGATCTTCTTG 60.018 42.308 0.00 0.00 31.32 3.02
134 135 6.617782 TCTTCATCTTCCAGATCTTCTTGT 57.382 37.500 0.00 0.00 31.32 3.16
135 136 7.013823 TCTTCATCTTCCAGATCTTCTTGTT 57.986 36.000 0.00 0.00 31.32 2.83
136 137 8.138928 TCTTCATCTTCCAGATCTTCTTGTTA 57.861 34.615 0.00 0.00 31.32 2.41
137 138 8.766476 TCTTCATCTTCCAGATCTTCTTGTTAT 58.234 33.333 0.00 0.00 31.32 1.89
138 139 9.393512 CTTCATCTTCCAGATCTTCTTGTTATT 57.606 33.333 0.00 0.00 31.32 1.40
143 144 8.992349 TCTTCCAGATCTTCTTGTTATTATCCA 58.008 33.333 0.00 0.00 0.00 3.41
144 145 8.964476 TTCCAGATCTTCTTGTTATTATCCAC 57.036 34.615 0.00 0.00 0.00 4.02
145 146 8.324191 TCCAGATCTTCTTGTTATTATCCACT 57.676 34.615 0.00 0.00 0.00 4.00
146 147 8.206867 TCCAGATCTTCTTGTTATTATCCACTG 58.793 37.037 0.00 0.00 0.00 3.66
147 148 8.206867 CCAGATCTTCTTGTTATTATCCACTGA 58.793 37.037 0.00 0.00 0.00 3.41
148 149 9.039870 CAGATCTTCTTGTTATTATCCACTGAC 57.960 37.037 0.00 0.00 0.00 3.51
149 150 8.762645 AGATCTTCTTGTTATTATCCACTGACA 58.237 33.333 0.00 0.00 0.00 3.58
150 151 8.723942 ATCTTCTTGTTATTATCCACTGACAC 57.276 34.615 0.00 0.00 0.00 3.67
151 152 7.676004 TCTTCTTGTTATTATCCACTGACACA 58.324 34.615 0.00 0.00 0.00 3.72
152 153 8.321353 TCTTCTTGTTATTATCCACTGACACAT 58.679 33.333 0.00 0.00 0.00 3.21
153 154 8.492673 TTCTTGTTATTATCCACTGACACATC 57.507 34.615 0.00 0.00 0.00 3.06
154 155 7.619965 TCTTGTTATTATCCACTGACACATCA 58.380 34.615 0.00 0.00 0.00 3.07
168 169 4.877823 TGACACATCAGATTGGATTAGTGC 59.122 41.667 0.00 0.00 29.12 4.40
169 170 5.108187 ACACATCAGATTGGATTAGTGCT 57.892 39.130 0.00 0.00 29.12 4.40
170 171 5.121811 ACACATCAGATTGGATTAGTGCTC 58.878 41.667 0.00 0.00 29.12 4.26
171 172 5.104610 ACACATCAGATTGGATTAGTGCTCT 60.105 40.000 0.00 0.00 29.12 4.09
172 173 6.098838 ACACATCAGATTGGATTAGTGCTCTA 59.901 38.462 0.00 0.00 29.12 2.43
173 174 7.160049 CACATCAGATTGGATTAGTGCTCTAT 58.840 38.462 0.00 0.00 0.00 1.98
174 175 8.309656 CACATCAGATTGGATTAGTGCTCTATA 58.690 37.037 0.00 0.00 0.00 1.31
175 176 8.310382 ACATCAGATTGGATTAGTGCTCTATAC 58.690 37.037 0.00 0.00 0.00 1.47
176 177 7.839680 TCAGATTGGATTAGTGCTCTATACA 57.160 36.000 0.00 0.00 0.00 2.29
177 178 8.427902 TCAGATTGGATTAGTGCTCTATACAT 57.572 34.615 0.00 0.00 0.00 2.29
178 179 9.533831 TCAGATTGGATTAGTGCTCTATACATA 57.466 33.333 0.00 0.00 0.00 2.29
179 180 9.800433 CAGATTGGATTAGTGCTCTATACATAG 57.200 37.037 0.00 0.00 0.00 2.23
180 181 9.760926 AGATTGGATTAGTGCTCTATACATAGA 57.239 33.333 0.00 0.00 37.76 1.98
198 199 6.997655 ACATAGAGTTCACTGAGAATTGTCA 58.002 36.000 5.05 5.05 38.76 3.58
199 200 7.445121 ACATAGAGTTCACTGAGAATTGTCAA 58.555 34.615 6.75 0.00 38.76 3.18
200 201 8.099537 ACATAGAGTTCACTGAGAATTGTCAAT 58.900 33.333 6.75 0.00 38.76 2.57
201 202 8.944029 CATAGAGTTCACTGAGAATTGTCAATT 58.056 33.333 10.63 10.63 38.76 2.32
202 203 7.814264 AGAGTTCACTGAGAATTGTCAATTT 57.186 32.000 12.04 3.03 38.76 1.82
203 204 7.869800 AGAGTTCACTGAGAATTGTCAATTTC 58.130 34.615 12.04 11.32 38.76 2.17
204 205 6.974965 AGTTCACTGAGAATTGTCAATTTCC 58.025 36.000 12.04 7.80 38.76 3.13
205 206 6.547141 AGTTCACTGAGAATTGTCAATTTCCA 59.453 34.615 12.04 11.37 38.76 3.53
206 207 6.317789 TCACTGAGAATTGTCAATTTCCAC 57.682 37.500 12.04 0.01 0.00 4.02
207 208 5.049474 TCACTGAGAATTGTCAATTTCCACG 60.049 40.000 12.04 9.22 0.00 4.94
208 209 4.821805 ACTGAGAATTGTCAATTTCCACGT 59.178 37.500 12.04 9.68 0.00 4.49
209 210 5.995282 ACTGAGAATTGTCAATTTCCACGTA 59.005 36.000 12.04 0.00 0.00 3.57
210 211 6.485313 ACTGAGAATTGTCAATTTCCACGTAA 59.515 34.615 12.04 0.00 0.00 3.18
211 212 7.012894 ACTGAGAATTGTCAATTTCCACGTAAA 59.987 33.333 12.04 0.00 0.00 2.01
212 213 7.881142 TGAGAATTGTCAATTTCCACGTAAAT 58.119 30.769 12.04 0.00 0.00 1.40
213 214 8.020819 TGAGAATTGTCAATTTCCACGTAAATC 58.979 33.333 12.04 0.00 0.00 2.17
214 215 8.110860 AGAATTGTCAATTTCCACGTAAATCT 57.889 30.769 12.04 0.00 0.00 2.40
215 216 8.576442 AGAATTGTCAATTTCCACGTAAATCTT 58.424 29.630 12.04 0.00 0.00 2.40
216 217 9.191995 GAATTGTCAATTTCCACGTAAATCTTT 57.808 29.630 12.04 0.00 0.00 2.52
217 218 9.541143 AATTGTCAATTTCCACGTAAATCTTTT 57.459 25.926 4.91 0.00 0.00 2.27
218 219 8.934507 TTGTCAATTTCCACGTAAATCTTTTT 57.065 26.923 0.00 0.00 0.00 1.94
226 227 9.518906 TTTCCACGTAAATCTTTTTAAGGAAAC 57.481 29.630 0.00 0.00 38.46 2.78
371 374 2.704725 AAAATGCTCGCACGAATGTT 57.295 40.000 0.00 0.00 0.00 2.71
372 375 2.247311 AAATGCTCGCACGAATGTTC 57.753 45.000 0.00 0.00 0.00 3.18
386 550 5.269414 CGAATGTTCGCGTAAAATCAATG 57.731 39.130 5.77 0.00 44.26 2.82
388 552 5.676744 CGAATGTTCGCGTAAAATCAATGAT 59.323 36.000 5.77 0.00 44.26 2.45
391 555 6.410243 TGTTCGCGTAAAATCAATGATACA 57.590 33.333 5.77 0.00 0.00 2.29
395 559 5.989168 TCGCGTAAAATCAATGATACAGGAT 59.011 36.000 5.77 0.00 0.00 3.24
414 578 6.425114 ACAGGATTTAGATGCGCAATACTTAG 59.575 38.462 17.11 0.33 0.00 2.18
416 580 5.932303 GGATTTAGATGCGCAATACTTAGGA 59.068 40.000 17.11 0.00 0.00 2.94
417 581 6.128526 GGATTTAGATGCGCAATACTTAGGAC 60.129 42.308 17.11 0.00 0.00 3.85
451 615 2.425668 ACAGAACAAAAACAGGGGAACG 59.574 45.455 0.00 0.00 0.00 3.95
461 625 1.333177 CAGGGGAACGAGATAGGGAG 58.667 60.000 0.00 0.00 0.00 4.30
462 626 1.133450 CAGGGGAACGAGATAGGGAGA 60.133 57.143 0.00 0.00 0.00 3.71
463 627 1.574339 AGGGGAACGAGATAGGGAGAA 59.426 52.381 0.00 0.00 0.00 2.87
464 628 1.964933 GGGGAACGAGATAGGGAGAAG 59.035 57.143 0.00 0.00 0.00 2.85
465 629 2.424523 GGGGAACGAGATAGGGAGAAGA 60.425 54.545 0.00 0.00 0.00 2.87
466 630 3.297736 GGGAACGAGATAGGGAGAAGAA 58.702 50.000 0.00 0.00 0.00 2.52
467 631 3.898741 GGGAACGAGATAGGGAGAAGAAT 59.101 47.826 0.00 0.00 0.00 2.40
468 632 4.345547 GGGAACGAGATAGGGAGAAGAATT 59.654 45.833 0.00 0.00 0.00 2.17
469 633 5.293560 GGAACGAGATAGGGAGAAGAATTG 58.706 45.833 0.00 0.00 0.00 2.32
470 634 4.946478 ACGAGATAGGGAGAAGAATTGG 57.054 45.455 0.00 0.00 0.00 3.16
471 635 4.547671 ACGAGATAGGGAGAAGAATTGGA 58.452 43.478 0.00 0.00 0.00 3.53
472 636 4.962995 ACGAGATAGGGAGAAGAATTGGAA 59.037 41.667 0.00 0.00 0.00 3.53
473 637 5.069781 ACGAGATAGGGAGAAGAATTGGAAG 59.930 44.000 0.00 0.00 0.00 3.46
474 638 5.069781 CGAGATAGGGAGAAGAATTGGAAGT 59.930 44.000 0.00 0.00 0.00 3.01
475 639 6.407525 CGAGATAGGGAGAAGAATTGGAAGTT 60.408 42.308 0.00 0.00 0.00 2.66
476 640 7.277405 AGATAGGGAGAAGAATTGGAAGTTT 57.723 36.000 0.00 0.00 0.00 2.66
477 641 7.703755 AGATAGGGAGAAGAATTGGAAGTTTT 58.296 34.615 0.00 0.00 0.00 2.43
478 642 7.613411 AGATAGGGAGAAGAATTGGAAGTTTTG 59.387 37.037 0.00 0.00 0.00 2.44
479 643 4.835056 AGGGAGAAGAATTGGAAGTTTTGG 59.165 41.667 0.00 0.00 0.00 3.28
480 644 4.021104 GGGAGAAGAATTGGAAGTTTTGGG 60.021 45.833 0.00 0.00 0.00 4.12
481 645 4.832823 GGAGAAGAATTGGAAGTTTTGGGA 59.167 41.667 0.00 0.00 0.00 4.37
482 646 5.279006 GGAGAAGAATTGGAAGTTTTGGGAC 60.279 44.000 0.00 0.00 0.00 4.46
483 647 4.588951 AGAAGAATTGGAAGTTTTGGGACC 59.411 41.667 0.00 0.00 0.00 4.46
484 648 2.890945 AGAATTGGAAGTTTTGGGACCG 59.109 45.455 0.00 0.00 0.00 4.79
485 649 1.627864 ATTGGAAGTTTTGGGACCGG 58.372 50.000 0.00 0.00 0.00 5.28
486 650 0.468400 TTGGAAGTTTTGGGACCGGG 60.468 55.000 6.32 0.00 0.00 5.73
487 651 1.605451 GGAAGTTTTGGGACCGGGG 60.605 63.158 6.32 0.00 0.00 5.73
488 652 1.605451 GAAGTTTTGGGACCGGGGG 60.605 63.158 6.32 0.00 0.00 5.40
489 653 2.361865 GAAGTTTTGGGACCGGGGGT 62.362 60.000 6.32 0.00 39.44 4.95
500 664 4.704833 CGGGGGTCACACTGGCTG 62.705 72.222 0.00 0.00 0.00 4.85
501 665 4.351054 GGGGGTCACACTGGCTGG 62.351 72.222 0.00 0.00 0.00 4.85
502 666 3.570212 GGGGTCACACTGGCTGGT 61.570 66.667 0.00 0.00 0.00 4.00
503 667 2.515901 GGGTCACACTGGCTGGTT 59.484 61.111 0.00 0.00 0.00 3.67
504 668 1.152756 GGGTCACACTGGCTGGTTT 60.153 57.895 0.00 0.00 0.00 3.27
505 669 0.109723 GGGTCACACTGGCTGGTTTA 59.890 55.000 0.00 0.00 0.00 2.01
506 670 1.523758 GGTCACACTGGCTGGTTTAG 58.476 55.000 0.00 0.00 0.00 1.85
516 680 1.875963 CTGGTTTAGCTGCAACGGG 59.124 57.895 1.02 0.00 0.00 5.28
517 681 0.605319 CTGGTTTAGCTGCAACGGGA 60.605 55.000 1.02 0.00 0.00 5.14
518 682 0.605319 TGGTTTAGCTGCAACGGGAG 60.605 55.000 1.02 0.00 35.23 4.30
519 683 1.305930 GGTTTAGCTGCAACGGGAGG 61.306 60.000 1.02 0.00 32.28 4.30
520 684 1.002624 TTTAGCTGCAACGGGAGGG 60.003 57.895 1.02 0.00 32.28 4.30
521 685 2.478335 TTTAGCTGCAACGGGAGGGG 62.478 60.000 1.02 0.00 32.28 4.79
524 688 3.399181 CTGCAACGGGAGGGGCTA 61.399 66.667 0.00 0.00 34.66 3.93
525 689 2.931105 TGCAACGGGAGGGGCTAA 60.931 61.111 0.00 0.00 34.66 3.09
526 690 2.353573 GCAACGGGAGGGGCTAAA 59.646 61.111 0.00 0.00 0.00 1.85
527 691 1.749258 GCAACGGGAGGGGCTAAAG 60.749 63.158 0.00 0.00 0.00 1.85
528 692 1.988015 CAACGGGAGGGGCTAAAGA 59.012 57.895 0.00 0.00 0.00 2.52
529 693 0.546598 CAACGGGAGGGGCTAAAGAT 59.453 55.000 0.00 0.00 0.00 2.40
530 694 0.546598 AACGGGAGGGGCTAAAGATG 59.453 55.000 0.00 0.00 0.00 2.90
531 695 1.227973 CGGGAGGGGCTAAAGATGC 60.228 63.158 0.00 0.00 0.00 3.91
606 897 2.433664 GCATGTGGCCAGCTTTGC 60.434 61.111 5.11 9.69 36.11 3.68
671 963 3.053842 ACCCAACATCTCAATCTGCATCT 60.054 43.478 0.00 0.00 0.00 2.90
821 1129 1.705727 GTCGCCGGTGATGTTTACG 59.294 57.895 22.69 3.16 0.00 3.18
846 1154 4.161189 CAGAGGAAATCTAGAGCAACCAGA 59.839 45.833 0.00 0.00 36.10 3.86
902 1210 1.844497 TCACCTCACCCTCGAGAGATA 59.156 52.381 15.71 0.00 40.84 1.98
934 1242 5.362143 TCTCTCTCCATCTATCCAACAACAG 59.638 44.000 0.00 0.00 0.00 3.16
1017 1334 3.823330 ATGGAGTCGTCGTCCGCC 61.823 66.667 0.00 0.00 36.82 6.13
1111 1428 3.535629 CTCGTGCTCAACAGCCCCA 62.536 63.158 0.00 0.00 46.26 4.96
1407 1727 0.235926 GCGCGCTTCAGTTTTCTCTT 59.764 50.000 26.67 0.00 0.00 2.85
1420 1740 6.015350 TCAGTTTTCTCTTCTCTTCCACGTAT 60.015 38.462 0.00 0.00 0.00 3.06
1422 1742 7.976734 CAGTTTTCTCTTCTCTTCCACGTATAT 59.023 37.037 0.00 0.00 0.00 0.86
1424 1744 7.406031 TTTCTCTTCTCTTCCACGTATATGT 57.594 36.000 0.00 0.00 0.00 2.29
1453 1773 2.229543 TGCTAGCTTTTTGACCAGCATG 59.770 45.455 17.23 0.00 34.30 4.06
1454 1774 2.872370 CTAGCTTTTTGACCAGCATGC 58.128 47.619 10.51 10.51 31.97 4.06
1455 1775 1.042229 AGCTTTTTGACCAGCATGCA 58.958 45.000 21.98 0.00 31.97 3.96
1456 1776 1.142474 GCTTTTTGACCAGCATGCAC 58.858 50.000 21.98 8.73 31.97 4.57
1497 1829 8.088365 AGGAACATTAATTCAGTTTTTGCCTAC 58.912 33.333 0.00 0.00 0.00 3.18
1498 1830 8.088365 GGAACATTAATTCAGTTTTTGCCTACT 58.912 33.333 0.00 0.00 0.00 2.57
1501 1833 9.515226 ACATTAATTCAGTTTTTGCCTACTAGA 57.485 29.630 0.00 0.00 0.00 2.43
1502 1834 9.994432 CATTAATTCAGTTTTTGCCTACTAGAG 57.006 33.333 0.00 0.00 0.00 2.43
1503 1835 9.740710 ATTAATTCAGTTTTTGCCTACTAGAGT 57.259 29.630 0.00 0.00 0.00 3.24
1521 1853 8.203937 ACTAGAGTATACATATCGTGATGCTC 57.796 38.462 5.50 0.00 32.61 4.26
1523 1855 7.637631 AGAGTATACATATCGTGATGCTCAT 57.362 36.000 5.50 0.00 33.69 2.90
1605 1974 3.316308 CAGTATGGCCTTTGTAAGCATCC 59.684 47.826 3.32 0.00 0.00 3.51
1606 1975 2.834638 ATGGCCTTTGTAAGCATCCT 57.165 45.000 3.32 0.00 0.00 3.24
1607 1976 2.128771 TGGCCTTTGTAAGCATCCTC 57.871 50.000 3.32 0.00 0.00 3.71
1611 1980 2.879756 GCCTTTGTAAGCATCCTCACCA 60.880 50.000 0.00 0.00 0.00 4.17
1612 1981 3.624777 CCTTTGTAAGCATCCTCACCAT 58.375 45.455 0.00 0.00 0.00 3.55
1614 1983 3.998913 TTGTAAGCATCCTCACCATCA 57.001 42.857 0.00 0.00 0.00 3.07
1616 1985 2.092968 TGTAAGCATCCTCACCATCACC 60.093 50.000 0.00 0.00 0.00 4.02
1617 1986 0.994247 AAGCATCCTCACCATCACCA 59.006 50.000 0.00 0.00 0.00 4.17
1622 2005 1.067295 TCCTCACCATCACCAGCTTT 58.933 50.000 0.00 0.00 0.00 3.51
1633 2016 6.891908 ACCATCACCAGCTTTTGTAATATCTT 59.108 34.615 0.00 0.00 0.00 2.40
1656 2039 6.631971 TCTGAAATAATTTGCATCGCCATA 57.368 33.333 0.00 0.00 0.00 2.74
1697 2085 2.236395 CTCCGGACTAATCCTTGTTGGT 59.764 50.000 0.00 0.00 43.73 3.67
1938 2339 0.609957 TTCGGCCTCTTCAGGTACGA 60.610 55.000 0.00 6.05 44.43 3.43
1953 2354 4.914420 CGACCTGCGCGCCTCTAG 62.914 72.222 30.77 19.10 0.00 2.43
1954 2355 4.577246 GACCTGCGCGCCTCTAGG 62.577 72.222 30.77 29.11 36.39 3.02
1956 2357 3.217017 CCTGCGCGCCTCTAGGTA 61.217 66.667 30.77 5.88 37.57 3.08
1965 2368 2.807392 GCGCCTCTAGGTAGTAGTACAG 59.193 54.545 9.89 0.00 37.57 2.74
1972 2375 8.592809 GCCTCTAGGTAGTAGTACAGTTATCTA 58.407 40.741 9.89 0.67 37.57 1.98
2025 2428 1.069636 GCTCCTGCTCTGTTTTCAACG 60.070 52.381 0.00 0.00 36.03 4.10
2027 2430 2.210116 TCCTGCTCTGTTTTCAACGAC 58.790 47.619 0.00 0.00 0.00 4.34
2028 2431 2.158957 TCCTGCTCTGTTTTCAACGACT 60.159 45.455 0.00 0.00 0.00 4.18
2029 2432 3.069016 TCCTGCTCTGTTTTCAACGACTA 59.931 43.478 0.00 0.00 0.00 2.59
2261 2768 4.019231 AGTGTCTCCCATTAACCTTCCTTC 60.019 45.833 0.00 0.00 0.00 3.46
2287 2807 2.198827 ATTTCACTGTGCGGATTCCA 57.801 45.000 2.12 0.00 0.00 3.53
2289 2809 0.107643 TTCACTGTGCGGATTCCACA 59.892 50.000 2.12 0.00 40.61 4.17
2291 2811 1.552792 TCACTGTGCGGATTCCACATA 59.447 47.619 2.12 0.00 41.84 2.29
2306 2834 4.415596 TCCACATAATTTTCCAACCAGCT 58.584 39.130 0.00 0.00 0.00 4.24
2326 2854 0.520404 GTTGCCACATCAGTCTGCAG 59.480 55.000 7.63 7.63 34.95 4.41
2328 2856 1.002868 GCCACATCAGTCTGCAGGT 60.003 57.895 15.13 0.00 0.00 4.00
2337 2869 3.334691 TCAGTCTGCAGGTTTAAATCCG 58.665 45.455 15.13 0.00 0.00 4.18
2360 2892 9.888878 TCCGTAAGATTTACTAGTCATTAATCG 57.111 33.333 0.00 0.00 43.02 3.34
2361 2893 9.888878 CCGTAAGATTTACTAGTCATTAATCGA 57.111 33.333 0.00 0.00 43.02 3.59
2364 2896 8.508800 AAGATTTACTAGTCATTAATCGAGCG 57.491 34.615 0.00 0.00 32.05 5.03
2365 2897 7.649973 AGATTTACTAGTCATTAATCGAGCGT 58.350 34.615 0.00 0.00 32.05 5.07
2366 2898 7.804129 AGATTTACTAGTCATTAATCGAGCGTC 59.196 37.037 0.00 0.00 32.05 5.19
2367 2899 6.615264 TTACTAGTCATTAATCGAGCGTCT 57.385 37.500 0.00 0.00 0.00 4.18
2368 2900 5.502153 ACTAGTCATTAATCGAGCGTCTT 57.498 39.130 0.00 0.00 0.00 3.01
2369 2901 5.274718 ACTAGTCATTAATCGAGCGTCTTG 58.725 41.667 0.00 0.00 0.00 3.02
2370 2902 2.860735 AGTCATTAATCGAGCGTCTTGC 59.139 45.455 0.00 0.00 46.98 4.01
2395 2927 1.068127 ACGACGCCACACTTTTACTCT 59.932 47.619 0.00 0.00 0.00 3.24
2398 2930 2.987821 GACGCCACACTTTTACTCTCTC 59.012 50.000 0.00 0.00 0.00 3.20
2417 2949 9.411189 ACTCTCTCCGTAAAGAAATATAAGAGT 57.589 33.333 0.00 0.00 31.80 3.24
2418 2950 9.672086 CTCTCTCCGTAAAGAAATATAAGAGTG 57.328 37.037 0.00 0.00 31.80 3.51
2419 2951 9.186837 TCTCTCCGTAAAGAAATATAAGAGTGT 57.813 33.333 0.00 0.00 31.80 3.55
2450 3109 3.008049 AGAAGTACTTTTCAGGCACCGAT 59.992 43.478 10.02 0.00 0.00 4.18
2474 3136 1.607148 ACACGATTGAGTGACTCACGA 59.393 47.619 25.71 10.52 44.43 4.35
2490 3156 6.092955 ACTCACGAGGTAACAAGATTAACA 57.907 37.500 0.00 0.00 41.41 2.41
2551 3217 3.689649 ACGTCACTTTCTTGTCTGCTTTT 59.310 39.130 0.00 0.00 0.00 2.27
2552 3218 4.873827 ACGTCACTTTCTTGTCTGCTTTTA 59.126 37.500 0.00 0.00 0.00 1.52
2553 3219 5.527582 ACGTCACTTTCTTGTCTGCTTTTAT 59.472 36.000 0.00 0.00 0.00 1.40
2625 3291 1.201429 AAAGGGATGGTCGAGGTGCT 61.201 55.000 0.00 0.00 0.00 4.40
2674 3340 1.264826 GCTCGTCCCTATCGTCTTCTC 59.735 57.143 0.00 0.00 0.00 2.87
2675 3341 2.562635 CTCGTCCCTATCGTCTTCTCA 58.437 52.381 0.00 0.00 0.00 3.27
2676 3342 2.546368 CTCGTCCCTATCGTCTTCTCAG 59.454 54.545 0.00 0.00 0.00 3.35
2678 3344 2.025155 GTCCCTATCGTCTTCTCAGCA 58.975 52.381 0.00 0.00 0.00 4.41
2705 3373 4.276642 TGCCACATGATATTGGTAGCAAA 58.723 39.130 12.00 1.93 35.09 3.68
2716 3384 1.539388 TGGTAGCAAAGGACAAATGCG 59.461 47.619 0.00 0.00 44.60 4.73
2736 3404 1.459450 GTCTTAATTTCCCAGGCGCA 58.541 50.000 10.83 0.00 0.00 6.09
2738 3406 1.004277 TCTTAATTTCCCAGGCGCACT 59.996 47.619 10.83 0.02 0.00 4.40
2765 3435 3.373748 CGCACAAGAATACAAGCACCATA 59.626 43.478 0.00 0.00 0.00 2.74
2768 3438 5.335583 GCACAAGAATACAAGCACCATAACA 60.336 40.000 0.00 0.00 0.00 2.41
2769 3439 6.086222 CACAAGAATACAAGCACCATAACAC 58.914 40.000 0.00 0.00 0.00 3.32
2770 3440 5.767665 ACAAGAATACAAGCACCATAACACA 59.232 36.000 0.00 0.00 0.00 3.72
2773 3443 5.415701 AGAATACAAGCACCATAACACAAGG 59.584 40.000 0.00 0.00 0.00 3.61
2774 3444 1.613437 ACAAGCACCATAACACAAGGC 59.387 47.619 0.00 0.00 0.00 4.35
2775 3445 1.612950 CAAGCACCATAACACAAGGCA 59.387 47.619 0.00 0.00 0.00 4.75
2776 3446 1.247567 AGCACCATAACACAAGGCAC 58.752 50.000 0.00 0.00 0.00 5.01
2778 3448 1.335872 GCACCATAACACAAGGCACAC 60.336 52.381 0.00 0.00 0.00 3.82
2779 3449 1.069296 CACCATAACACAAGGCACACG 60.069 52.381 0.00 0.00 0.00 4.49
2780 3450 0.109781 CCATAACACAAGGCACACGC 60.110 55.000 0.00 0.00 37.44 5.34
2782 3452 0.874390 ATAACACAAGGCACACGCAG 59.126 50.000 0.00 0.00 41.24 5.18
2783 3453 0.179070 TAACACAAGGCACACGCAGA 60.179 50.000 0.00 0.00 41.24 4.26
2784 3454 0.819259 AACACAAGGCACACGCAGAT 60.819 50.000 0.00 0.00 41.24 2.90
2864 3549 9.450807 AAAAACTTTCAATCTATTCGTCAACTG 57.549 29.630 0.00 0.00 0.00 3.16
2865 3550 7.730364 AACTTTCAATCTATTCGTCAACTGT 57.270 32.000 0.00 0.00 0.00 3.55
2867 3552 6.929049 ACTTTCAATCTATTCGTCAACTGTCA 59.071 34.615 0.00 0.00 0.00 3.58
2868 3553 7.441157 ACTTTCAATCTATTCGTCAACTGTCAA 59.559 33.333 0.00 0.00 0.00 3.18
2872 3557 8.466798 TCAATCTATTCGTCAACTGTCAAGATA 58.533 33.333 0.00 0.00 0.00 1.98
2873 3558 8.750416 CAATCTATTCGTCAACTGTCAAGATAG 58.250 37.037 0.00 0.00 0.00 2.08
2875 3560 3.934457 TCGTCAACTGTCAAGATAGCA 57.066 42.857 0.00 0.00 0.00 3.49
2876 3561 3.575630 TCGTCAACTGTCAAGATAGCAC 58.424 45.455 0.00 0.00 0.00 4.40
2877 3562 3.005367 TCGTCAACTGTCAAGATAGCACA 59.995 43.478 0.00 0.00 0.00 4.57
2878 3563 3.740832 CGTCAACTGTCAAGATAGCACAA 59.259 43.478 0.00 0.00 0.00 3.33
2879 3564 4.211164 CGTCAACTGTCAAGATAGCACAAA 59.789 41.667 0.00 0.00 0.00 2.83
2880 3565 5.277297 CGTCAACTGTCAAGATAGCACAAAA 60.277 40.000 0.00 0.00 0.00 2.44
2881 3566 6.494842 GTCAACTGTCAAGATAGCACAAAAA 58.505 36.000 0.00 0.00 0.00 1.94
2918 3603 4.689612 ATTCCTCCTCTTAATTAGCGCA 57.310 40.909 11.47 0.00 0.00 6.09
2923 3608 5.304614 TCCTCCTCTTAATTAGCGCATACTT 59.695 40.000 11.47 2.60 0.00 2.24
2924 3609 6.492429 TCCTCCTCTTAATTAGCGCATACTTA 59.508 38.462 11.47 1.62 0.00 2.24
2925 3610 7.014905 TCCTCCTCTTAATTAGCGCATACTTAA 59.985 37.037 11.47 9.19 0.00 1.85
2927 3612 9.209175 CTCCTCTTAATTAGCGCATACTTAATT 57.791 33.333 11.47 13.04 0.00 1.40
2935 3620 7.792383 TTAGCGCATACTTAATTAGATCGAC 57.208 36.000 11.47 0.00 0.00 4.20
2936 3621 6.015027 AGCGCATACTTAATTAGATCGACT 57.985 37.500 11.47 0.00 0.00 4.18
2939 3624 8.244802 AGCGCATACTTAATTAGATCGACTATT 58.755 33.333 11.47 0.00 0.00 1.73
3000 3744 4.987832 TCGACTATTTTCTGACAGAGCTC 58.012 43.478 5.27 5.27 0.00 4.09
3001 3745 4.459337 TCGACTATTTTCTGACAGAGCTCA 59.541 41.667 17.77 0.00 0.00 4.26
3002 3746 5.048013 TCGACTATTTTCTGACAGAGCTCAA 60.048 40.000 17.77 0.00 0.00 3.02
3016 3760 5.052481 CAGAGCTCAATAATTGGATCGACA 58.948 41.667 17.77 0.00 0.00 4.35
3017 3761 5.177142 CAGAGCTCAATAATTGGATCGACAG 59.823 44.000 17.77 0.00 0.00 3.51
3034 3778 7.544566 GGATCGACAGAAATGTTAGTAGAACAA 59.455 37.037 0.00 0.00 33.42 2.83
3038 3782 8.162880 CGACAGAAATGTTAGTAGAACAATGAC 58.837 37.037 0.00 0.00 33.42 3.06
3039 3783 8.018677 ACAGAAATGTTAGTAGAACAATGACG 57.981 34.615 0.00 0.00 33.42 4.35
3043 3787 6.282199 ATGTTAGTAGAACAATGACGGAGT 57.718 37.500 0.00 0.00 37.24 3.85
3090 3834 4.081322 GAGATCTCCTCTCGGTAGTTCT 57.919 50.000 12.00 0.00 41.07 3.01
3091 3835 5.217978 GAGATCTCCTCTCGGTAGTTCTA 57.782 47.826 12.00 0.00 41.07 2.10
3092 3836 4.964593 AGATCTCCTCTCGGTAGTTCTAC 58.035 47.826 0.00 1.76 0.00 2.59
3095 3841 5.946942 TCTCCTCTCGGTAGTTCTACTAA 57.053 43.478 9.40 0.00 31.62 2.24
3098 3844 8.027524 TCTCCTCTCGGTAGTTCTACTAATAA 57.972 38.462 9.40 0.00 31.62 1.40
3102 3848 7.256756 TCTCGGTAGTTCTACTAATAAGTGC 57.743 40.000 9.40 0.00 36.36 4.40
3107 3853 7.414873 CGGTAGTTCTACTAATAAGTGCTGTCA 60.415 40.741 9.40 0.00 36.36 3.58
3143 3921 4.803426 GGTCCCGTGAGCAGAGCG 62.803 72.222 0.00 0.00 38.87 5.03
3265 4057 3.076079 AGAACATCACCACATGCATGA 57.924 42.857 32.75 11.83 0.00 3.07
3266 4058 3.628008 AGAACATCACCACATGCATGAT 58.372 40.909 32.75 13.78 33.28 2.45
3268 4060 2.134201 CATCACCACATGCATGATGC 57.866 50.000 32.75 11.12 42.27 3.91
3327 4119 1.184431 TCGGACAAATGTAGGGCGTA 58.816 50.000 0.00 0.00 0.00 4.42
3329 4121 1.134907 CGGACAAATGTAGGGCGTACT 60.135 52.381 17.26 1.91 32.19 2.73
3331 4123 2.354403 GGACAAATGTAGGGCGTACTGT 60.354 50.000 17.26 13.20 32.19 3.55
3345 4137 2.975851 CGTACTGTACCTTCGTGTGAAC 59.024 50.000 12.08 0.00 0.00 3.18
3373 4221 2.817258 GACTCTGCTACTGTCTGACTGT 59.183 50.000 21.38 21.38 34.59 3.55
3374 4222 4.004314 GACTCTGCTACTGTCTGACTGTA 58.996 47.826 21.33 21.33 32.45 2.74
3375 4223 4.594970 ACTCTGCTACTGTCTGACTGTAT 58.405 43.478 22.42 8.64 33.16 2.29
3376 4224 4.397730 ACTCTGCTACTGTCTGACTGTATG 59.602 45.833 22.42 17.73 33.16 2.39
3392 4240 9.457110 CTGACTGTATGTATCTAATGTGACTTC 57.543 37.037 0.00 0.00 0.00 3.01
3527 4375 5.506686 TCTCCGATATCTTCAGTCACTTG 57.493 43.478 0.34 0.00 0.00 3.16
3528 4376 4.046938 TCCGATATCTTCAGTCACTTGC 57.953 45.455 0.34 0.00 0.00 4.01
3544 4392 3.127548 CACTTGCTTTACTGGATCGCAAT 59.872 43.478 2.99 0.00 39.52 3.56
3545 4393 3.375299 ACTTGCTTTACTGGATCGCAATC 59.625 43.478 2.99 0.00 39.52 2.67
3546 4394 2.984562 TGCTTTACTGGATCGCAATCA 58.015 42.857 0.00 0.00 33.21 2.57
3549 4397 4.119862 GCTTTACTGGATCGCAATCACTA 58.880 43.478 0.00 0.00 33.21 2.74
3553 4401 4.142609 ACTGGATCGCAATCACTAACAT 57.857 40.909 0.00 0.00 33.21 2.71
3554 4402 3.873361 ACTGGATCGCAATCACTAACATG 59.127 43.478 0.00 0.00 33.21 3.21
3556 4404 4.122046 TGGATCGCAATCACTAACATGAG 58.878 43.478 0.00 0.00 33.21 2.90
3557 4405 4.122776 GGATCGCAATCACTAACATGAGT 58.877 43.478 0.00 0.00 33.21 3.41
3558 4406 4.025396 GGATCGCAATCACTAACATGAGTG 60.025 45.833 0.00 3.67 45.29 3.51
3562 4410 3.127548 GCAATCACTAACATGAGTGGTGG 59.872 47.826 13.06 6.32 45.79 4.61
3817 4674 2.802816 GCTCACGGTAACCATCATCATC 59.197 50.000 0.00 0.00 0.00 2.92
3818 4675 3.393800 CTCACGGTAACCATCATCATCC 58.606 50.000 0.00 0.00 0.00 3.51
3819 4676 3.038280 TCACGGTAACCATCATCATCCT 58.962 45.455 0.00 0.00 0.00 3.24
3829 4686 3.933332 CCATCATCATCCTCATCATCACG 59.067 47.826 0.00 0.00 0.00 4.35
3836 4693 0.659427 CCTCATCATCACGCGCAAAT 59.341 50.000 5.73 0.00 0.00 2.32
3838 4695 2.369600 CTCATCATCACGCGCAAATTC 58.630 47.619 5.73 0.00 0.00 2.17
3839 4696 1.736681 TCATCATCACGCGCAAATTCA 59.263 42.857 5.73 0.00 0.00 2.57
3840 4697 2.106418 CATCATCACGCGCAAATTCAG 58.894 47.619 5.73 0.00 0.00 3.02
3841 4698 0.179192 TCATCACGCGCAAATTCAGC 60.179 50.000 5.73 0.00 0.00 4.26
3843 4700 2.582202 ATCACGCGCAAATTCAGCCG 62.582 55.000 5.73 10.11 33.79 5.52
3844 4701 3.047280 ACGCGCAAATTCAGCCGA 61.047 55.556 5.73 0.00 32.57 5.54
3845 4702 2.398554 ACGCGCAAATTCAGCCGAT 61.399 52.632 5.73 0.00 32.57 4.18
3846 4703 1.935917 CGCGCAAATTCAGCCGATG 60.936 57.895 8.75 0.00 0.00 3.84
3847 4704 1.137404 GCGCAAATTCAGCCGATGT 59.863 52.632 0.30 0.00 0.00 3.06
3848 4705 0.376852 GCGCAAATTCAGCCGATGTA 59.623 50.000 0.30 0.00 0.00 2.29
3858 4715 4.418013 TCAGCCGATGTATGTTTGTTTG 57.582 40.909 0.00 0.00 0.00 2.93
3886 4743 2.436596 AAATGCAGGCTGGGCTGACT 62.437 55.000 24.81 9.99 0.00 3.41
3893 4750 0.610232 GGCTGGGCTGACTGAACAAT 60.610 55.000 0.00 0.00 0.00 2.71
3896 4753 2.819608 GCTGGGCTGACTGAACAATTTA 59.180 45.455 0.00 0.00 0.00 1.40
3928 4792 2.033448 AAGCCATTGCCGTCGGAA 59.967 55.556 17.49 0.00 38.69 4.30
4044 4908 2.444624 CGTCGCAACAGGTGATCGG 61.445 63.158 0.00 0.00 38.50 4.18
4061 4925 0.852777 CGGTCGATGCCTGTAAATCG 59.147 55.000 0.00 0.00 45.46 3.34
4071 4935 2.678336 GCCTGTAAATCGTCTGGAAAGG 59.322 50.000 0.00 0.00 0.00 3.11
4075 4939 3.991773 TGTAAATCGTCTGGAAAGGAACG 59.008 43.478 0.00 0.00 0.00 3.95
4336 5216 2.231478 TCGACAAGATGGACTTCCTCAC 59.769 50.000 0.00 0.00 36.61 3.51
4403 5287 2.693762 CCTCGGAGTCGCGGTAACA 61.694 63.158 6.13 0.00 36.59 2.41
4422 5307 2.609459 ACAATCGATCGACATTGCCTTC 59.391 45.455 24.35 0.00 0.00 3.46
4423 5308 2.868583 CAATCGATCGACATTGCCTTCT 59.131 45.455 22.06 0.00 0.00 2.85
4424 5309 1.926561 TCGATCGACATTGCCTTCTG 58.073 50.000 15.15 0.00 0.00 3.02
4427 5312 1.596727 GATCGACATTGCCTTCTGCTC 59.403 52.381 0.00 0.00 42.00 4.26
4428 5313 0.610174 TCGACATTGCCTTCTGCTCT 59.390 50.000 0.00 0.00 42.00 4.09
4429 5314 0.725686 CGACATTGCCTTCTGCTCTG 59.274 55.000 0.00 0.00 42.00 3.35
4430 5315 1.673923 CGACATTGCCTTCTGCTCTGA 60.674 52.381 0.00 0.00 42.00 3.27
4449 5365 2.768527 TGAAGGAGTATCTTCCAGCAGG 59.231 50.000 0.00 0.00 41.67 4.85
4713 5637 7.327032 GTGATCAAAGAAAGTTAACTTGGCATC 59.673 37.037 21.22 14.40 36.12 3.91
4731 5655 4.496341 GGCATCATGTAAAGTTCGATGTGG 60.496 45.833 0.00 0.00 36.64 4.17
4744 5668 4.192429 TCGATGTGGGTGCTCATATATG 57.808 45.455 6.36 6.36 0.00 1.78
4860 5784 5.868043 TGACATGTCAAGTAAGCATCTTG 57.132 39.130 26.02 8.54 42.25 3.02
4876 5803 5.947443 GCATCTTGCAGAGAAGTTTTACAT 58.053 37.500 3.27 0.00 44.26 2.29
4987 5914 1.143073 ACTTGTGGGACTGGAGGAAAC 59.857 52.381 0.00 0.00 0.00 2.78
5039 5966 6.715280 ACAGGTGAAGTGATTTACTGATGAT 58.285 36.000 0.00 0.00 40.26 2.45
5040 5967 6.596888 ACAGGTGAAGTGATTTACTGATGATG 59.403 38.462 0.00 0.00 40.26 3.07
5044 5971 6.314648 GTGAAGTGATTTACTGATGATGAGCA 59.685 38.462 0.00 0.00 40.26 4.26
5045 5972 7.012138 GTGAAGTGATTTACTGATGATGAGCAT 59.988 37.037 0.00 0.00 40.26 3.79
5070 6001 8.485976 TCAAAATTGTACCTTTGTCCAAAAAG 57.514 30.769 10.31 0.00 36.99 2.27
5568 6510 1.301009 GGATTGAGCCGATCCGTCC 60.301 63.158 5.89 0.00 35.06 4.79
5569 6511 1.661821 GATTGAGCCGATCCGTCCG 60.662 63.158 0.00 0.00 0.00 4.79
5570 6512 3.792053 ATTGAGCCGATCCGTCCGC 62.792 63.158 0.00 0.00 0.00 5.54
5572 6514 4.632458 GAGCCGATCCGTCCGCTC 62.632 72.222 3.70 3.70 44.39 5.03
5574 6516 4.508128 GCCGATCCGTCCGCTCAA 62.508 66.667 0.00 0.00 0.00 3.02
5575 6517 2.278857 CCGATCCGTCCGCTCAAG 60.279 66.667 0.00 0.00 0.00 3.02
5576 6518 2.771639 CCGATCCGTCCGCTCAAGA 61.772 63.158 0.00 0.00 0.00 3.02
5577 6519 1.138883 CGATCCGTCCGCTCAAGAA 59.861 57.895 0.00 0.00 0.00 2.52
5578 6520 1.140407 CGATCCGTCCGCTCAAGAAC 61.140 60.000 0.00 0.00 0.00 3.01
5579 6521 0.806492 GATCCGTCCGCTCAAGAACC 60.806 60.000 0.00 0.00 0.00 3.62
5580 6522 1.541310 ATCCGTCCGCTCAAGAACCA 61.541 55.000 0.00 0.00 0.00 3.67
5581 6523 1.079127 CCGTCCGCTCAAGAACCAT 60.079 57.895 0.00 0.00 0.00 3.55
5582 6524 1.361668 CCGTCCGCTCAAGAACCATG 61.362 60.000 0.00 0.00 0.00 3.66
5583 6525 1.361668 CGTCCGCTCAAGAACCATGG 61.362 60.000 11.19 11.19 0.00 3.66
5584 6526 1.026718 GTCCGCTCAAGAACCATGGG 61.027 60.000 18.09 0.00 0.00 4.00
5585 6527 2.409870 CCGCTCAAGAACCATGGGC 61.410 63.158 18.09 7.79 40.96 5.36
5586 6528 2.409870 CGCTCAAGAACCATGGGCC 61.410 63.158 18.09 7.13 41.33 5.80
5587 6529 2.409870 GCTCAAGAACCATGGGCCG 61.410 63.158 18.09 2.35 38.37 6.13
5588 6530 1.002134 CTCAAGAACCATGGGCCGT 60.002 57.895 18.09 2.29 0.00 5.68
5589 6531 0.609131 CTCAAGAACCATGGGCCGTT 60.609 55.000 18.09 0.00 0.00 4.44
5590 6532 0.893270 TCAAGAACCATGGGCCGTTG 60.893 55.000 18.09 13.49 0.00 4.10
5591 6533 1.606313 AAGAACCATGGGCCGTTGG 60.606 57.895 18.09 20.48 39.02 3.77
5592 6534 2.034999 GAACCATGGGCCGTTGGA 59.965 61.111 26.84 0.00 36.79 3.53
5593 6535 1.379843 GAACCATGGGCCGTTGGAT 60.380 57.895 26.84 17.85 36.79 3.41
5594 6536 0.106918 GAACCATGGGCCGTTGGATA 60.107 55.000 26.84 0.00 36.79 2.59
5595 6537 0.555769 AACCATGGGCCGTTGGATAT 59.444 50.000 26.84 12.69 36.79 1.63
5596 6538 0.178992 ACCATGGGCCGTTGGATATG 60.179 55.000 26.84 10.93 36.79 1.78
5597 6539 0.178992 CCATGGGCCGTTGGATATGT 60.179 55.000 18.04 0.00 34.81 2.29
5598 6540 1.691196 CATGGGCCGTTGGATATGTT 58.309 50.000 0.00 0.00 0.00 2.71
5599 6541 2.031120 CATGGGCCGTTGGATATGTTT 58.969 47.619 0.00 0.00 0.00 2.83
5600 6542 2.223803 TGGGCCGTTGGATATGTTTT 57.776 45.000 0.00 0.00 0.00 2.43
5601 6543 2.530701 TGGGCCGTTGGATATGTTTTT 58.469 42.857 0.00 0.00 0.00 1.94
5602 6544 2.494073 TGGGCCGTTGGATATGTTTTTC 59.506 45.455 0.00 0.00 0.00 2.29
5603 6545 2.494073 GGGCCGTTGGATATGTTTTTCA 59.506 45.455 0.00 0.00 0.00 2.69
5604 6546 3.428862 GGGCCGTTGGATATGTTTTTCAG 60.429 47.826 0.00 0.00 0.00 3.02
5605 6547 3.442273 GGCCGTTGGATATGTTTTTCAGA 59.558 43.478 0.00 0.00 0.00 3.27
5606 6548 4.082463 GGCCGTTGGATATGTTTTTCAGAA 60.082 41.667 0.00 0.00 0.00 3.02
5607 6549 4.857037 GCCGTTGGATATGTTTTTCAGAAC 59.143 41.667 0.00 0.00 0.00 3.01
5608 6550 5.563867 GCCGTTGGATATGTTTTTCAGAACA 60.564 40.000 0.00 0.00 43.08 3.18
5609 6551 5.856455 CCGTTGGATATGTTTTTCAGAACAC 59.144 40.000 0.00 0.00 41.86 3.32
5610 6552 6.434596 CGTTGGATATGTTTTTCAGAACACA 58.565 36.000 0.00 0.00 41.86 3.72
5611 6553 6.915300 CGTTGGATATGTTTTTCAGAACACAA 59.085 34.615 0.00 0.00 41.86 3.33
5612 6554 7.113404 CGTTGGATATGTTTTTCAGAACACAAG 59.887 37.037 0.00 0.00 41.86 3.16
5613 6555 7.815840 TGGATATGTTTTTCAGAACACAAGA 57.184 32.000 0.00 0.00 41.86 3.02
5614 6556 8.231692 TGGATATGTTTTTCAGAACACAAGAA 57.768 30.769 0.00 0.00 41.86 2.52
5615 6557 8.859090 TGGATATGTTTTTCAGAACACAAGAAT 58.141 29.630 0.00 0.00 41.86 2.40
5616 6558 9.346725 GGATATGTTTTTCAGAACACAAGAATC 57.653 33.333 0.00 3.81 41.86 2.52
5619 6561 8.862550 ATGTTTTTCAGAACACAAGAATCTTC 57.137 30.769 0.00 0.00 41.86 2.87
5620 6562 7.257722 TGTTTTTCAGAACACAAGAATCTTCC 58.742 34.615 0.00 0.00 34.77 3.46
5621 6563 6.391227 TTTTCAGAACACAAGAATCTTCCC 57.609 37.500 0.00 0.00 0.00 3.97
5622 6564 4.021102 TCAGAACACAAGAATCTTCCCC 57.979 45.455 0.00 0.00 0.00 4.81
5623 6565 3.394274 TCAGAACACAAGAATCTTCCCCA 59.606 43.478 0.00 0.00 0.00 4.96
5624 6566 3.503748 CAGAACACAAGAATCTTCCCCAC 59.496 47.826 0.00 0.00 0.00 4.61
5625 6567 3.395941 AGAACACAAGAATCTTCCCCACT 59.604 43.478 0.00 0.00 0.00 4.00
5626 6568 3.884037 ACACAAGAATCTTCCCCACTT 57.116 42.857 0.00 0.00 0.00 3.16
5627 6569 4.993705 ACACAAGAATCTTCCCCACTTA 57.006 40.909 0.00 0.00 0.00 2.24
5628 6570 4.652822 ACACAAGAATCTTCCCCACTTAC 58.347 43.478 0.00 0.00 0.00 2.34
5785 6732 3.438434 GCCAAAAACACAAAAGCCAAGAA 59.562 39.130 0.00 0.00 0.00 2.52
5845 6792 6.859112 AATCGCCTATCCTATTACATGACT 57.141 37.500 0.00 0.00 0.00 3.41
5916 6863 2.567615 AGATCCAGTAACCAAACGCTCT 59.432 45.455 0.00 0.00 0.00 4.09
5941 6888 1.451067 CTCCGTCGGAGTGAGTAACT 58.549 55.000 29.66 0.00 44.25 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.586643 GGAAGTCCTCAATGTGTCCTTTATC 59.413 44.000 0.00 0.00 0.00 1.75
1 2 5.014123 TGGAAGTCCTCAATGTGTCCTTTAT 59.986 40.000 0.00 0.00 36.82 1.40
3 4 3.138283 TGGAAGTCCTCAATGTGTCCTTT 59.862 43.478 0.00 0.00 36.82 3.11
4 5 2.711009 TGGAAGTCCTCAATGTGTCCTT 59.289 45.455 0.00 0.00 36.82 3.36
5 6 2.338809 TGGAAGTCCTCAATGTGTCCT 58.661 47.619 0.00 0.00 36.82 3.85
6 7 2.859165 TGGAAGTCCTCAATGTGTCC 57.141 50.000 0.00 0.00 36.82 4.02
7 8 2.421424 GCATGGAAGTCCTCAATGTGTC 59.579 50.000 0.00 0.00 37.74 3.67
8 9 2.440409 GCATGGAAGTCCTCAATGTGT 58.560 47.619 0.00 0.00 37.74 3.72
9 10 1.747355 GGCATGGAAGTCCTCAATGTG 59.253 52.381 0.00 0.00 37.74 3.21
10 11 1.355381 TGGCATGGAAGTCCTCAATGT 59.645 47.619 0.00 0.00 37.74 2.71
11 12 2.133281 TGGCATGGAAGTCCTCAATG 57.867 50.000 0.00 0.00 38.40 2.82
12 13 2.905415 TTGGCATGGAAGTCCTCAAT 57.095 45.000 0.00 0.00 36.82 2.57
13 14 2.905415 ATTGGCATGGAAGTCCTCAA 57.095 45.000 0.00 0.00 36.82 3.02
14 15 2.621407 GGAATTGGCATGGAAGTCCTCA 60.621 50.000 0.00 0.00 35.21 3.86
15 16 2.027385 GGAATTGGCATGGAAGTCCTC 58.973 52.381 0.00 0.00 35.21 3.71
16 17 1.642762 AGGAATTGGCATGGAAGTCCT 59.357 47.619 0.25 0.25 41.86 3.85
17 18 2.027385 GAGGAATTGGCATGGAAGTCC 58.973 52.381 0.00 0.00 37.75 3.85
18 19 3.010200 AGAGGAATTGGCATGGAAGTC 57.990 47.619 0.00 0.00 0.00 3.01
19 20 3.463048 AAGAGGAATTGGCATGGAAGT 57.537 42.857 0.00 0.00 0.00 3.01
20 21 7.255730 CCTTATTAAGAGGAATTGGCATGGAAG 60.256 40.741 4.96 0.00 36.33 3.46
21 22 6.550854 CCTTATTAAGAGGAATTGGCATGGAA 59.449 38.462 4.96 0.00 36.33 3.53
22 23 6.070656 CCTTATTAAGAGGAATTGGCATGGA 58.929 40.000 4.96 0.00 36.33 3.41
23 24 5.835280 ACCTTATTAAGAGGAATTGGCATGG 59.165 40.000 13.15 0.00 37.72 3.66
24 25 6.966534 ACCTTATTAAGAGGAATTGGCATG 57.033 37.500 13.15 0.00 37.72 4.06
48 49 9.894783 GTCGCAGAGTCATTCTTACTAAATATA 57.105 33.333 0.00 0.00 36.95 0.86
49 50 7.591795 CGTCGCAGAGTCATTCTTACTAAATAT 59.408 37.037 0.00 0.00 36.95 1.28
50 51 6.910972 CGTCGCAGAGTCATTCTTACTAAATA 59.089 38.462 0.00 0.00 36.95 1.40
51 52 5.744345 CGTCGCAGAGTCATTCTTACTAAAT 59.256 40.000 0.00 0.00 36.95 1.40
52 53 5.093457 CGTCGCAGAGTCATTCTTACTAAA 58.907 41.667 0.00 0.00 36.95 1.85
53 54 4.393990 TCGTCGCAGAGTCATTCTTACTAA 59.606 41.667 0.00 0.00 36.95 2.24
54 55 3.937079 TCGTCGCAGAGTCATTCTTACTA 59.063 43.478 0.00 0.00 36.95 1.82
55 56 2.747989 TCGTCGCAGAGTCATTCTTACT 59.252 45.455 0.00 0.00 36.95 2.24
56 57 3.132629 TCGTCGCAGAGTCATTCTTAC 57.867 47.619 0.00 0.00 36.95 2.34
57 58 3.439129 TCTTCGTCGCAGAGTCATTCTTA 59.561 43.478 0.00 0.00 36.95 2.10
58 59 2.229062 TCTTCGTCGCAGAGTCATTCTT 59.771 45.455 0.00 0.00 36.95 2.52
59 60 1.813178 TCTTCGTCGCAGAGTCATTCT 59.187 47.619 0.00 0.00 36.95 2.40
60 61 2.264109 TCTTCGTCGCAGAGTCATTC 57.736 50.000 0.00 0.00 36.95 2.67
61 62 2.949451 ATCTTCGTCGCAGAGTCATT 57.051 45.000 0.33 0.00 36.95 2.57
62 63 2.033550 GGTATCTTCGTCGCAGAGTCAT 59.966 50.000 0.33 0.00 36.95 3.06
63 64 1.400846 GGTATCTTCGTCGCAGAGTCA 59.599 52.381 0.33 0.00 36.95 3.41
64 65 1.400846 TGGTATCTTCGTCGCAGAGTC 59.599 52.381 0.33 0.00 36.95 3.36
65 66 1.460504 TGGTATCTTCGTCGCAGAGT 58.539 50.000 0.33 0.00 36.95 3.24
66 67 2.389059 CATGGTATCTTCGTCGCAGAG 58.611 52.381 0.33 0.00 36.95 3.35
67 68 1.536072 GCATGGTATCTTCGTCGCAGA 60.536 52.381 0.00 0.00 0.00 4.26
68 69 0.855349 GCATGGTATCTTCGTCGCAG 59.145 55.000 0.00 0.00 0.00 5.18
69 70 0.869880 CGCATGGTATCTTCGTCGCA 60.870 55.000 0.00 0.00 0.00 5.10
70 71 0.594028 TCGCATGGTATCTTCGTCGC 60.594 55.000 0.00 0.00 0.00 5.19
71 72 1.781429 CTTCGCATGGTATCTTCGTCG 59.219 52.381 0.00 0.00 0.00 5.12
72 73 3.079960 TCTTCGCATGGTATCTTCGTC 57.920 47.619 0.00 0.00 0.00 4.20
73 74 3.735237 ATCTTCGCATGGTATCTTCGT 57.265 42.857 0.00 0.00 0.00 3.85
74 75 5.409643 AAAATCTTCGCATGGTATCTTCG 57.590 39.130 0.00 0.00 0.00 3.79
75 76 9.209175 AGTATAAAATCTTCGCATGGTATCTTC 57.791 33.333 0.00 0.00 0.00 2.87
76 77 9.561069 AAGTATAAAATCTTCGCATGGTATCTT 57.439 29.630 0.00 0.00 0.00 2.40
81 82 8.958119 TCTTAAGTATAAAATCTTCGCATGGT 57.042 30.769 1.63 0.00 0.00 3.55
82 83 8.499162 CCTCTTAAGTATAAAATCTTCGCATGG 58.501 37.037 1.63 0.00 0.00 3.66
83 84 8.012241 GCCTCTTAAGTATAAAATCTTCGCATG 58.988 37.037 1.63 0.00 0.00 4.06
84 85 7.715249 TGCCTCTTAAGTATAAAATCTTCGCAT 59.285 33.333 1.63 0.00 0.00 4.73
85 86 7.045416 TGCCTCTTAAGTATAAAATCTTCGCA 58.955 34.615 1.63 0.00 0.00 5.10
86 87 7.478520 TGCCTCTTAAGTATAAAATCTTCGC 57.521 36.000 1.63 0.00 0.00 4.70
87 88 9.482627 AGATGCCTCTTAAGTATAAAATCTTCG 57.517 33.333 1.63 0.00 0.00 3.79
95 96 9.988815 GAAGATGAAGATGCCTCTTAAGTATAA 57.011 33.333 4.06 0.00 41.87 0.98
96 97 8.589338 GGAAGATGAAGATGCCTCTTAAGTATA 58.411 37.037 4.06 0.00 41.87 1.47
97 98 7.071698 TGGAAGATGAAGATGCCTCTTAAGTAT 59.928 37.037 4.06 0.00 41.87 2.12
98 99 6.384015 TGGAAGATGAAGATGCCTCTTAAGTA 59.616 38.462 4.06 0.00 41.87 2.24
99 100 5.190528 TGGAAGATGAAGATGCCTCTTAAGT 59.809 40.000 4.06 0.00 41.87 2.24
100 101 5.678583 TGGAAGATGAAGATGCCTCTTAAG 58.321 41.667 4.06 0.00 41.87 1.85
101 102 5.426509 TCTGGAAGATGAAGATGCCTCTTAA 59.573 40.000 4.06 0.00 39.06 1.85
102 103 4.964897 TCTGGAAGATGAAGATGCCTCTTA 59.035 41.667 4.06 0.00 39.06 2.10
103 104 3.779183 TCTGGAAGATGAAGATGCCTCTT 59.221 43.478 3.68 3.68 40.77 2.85
104 105 3.382278 TCTGGAAGATGAAGATGCCTCT 58.618 45.455 0.00 0.00 38.67 3.69
105 106 3.834489 TCTGGAAGATGAAGATGCCTC 57.166 47.619 0.00 0.00 38.67 4.70
118 119 9.050601 GTGGATAATAACAAGAAGATCTGGAAG 57.949 37.037 0.00 0.00 0.00 3.46
119 120 8.772250 AGTGGATAATAACAAGAAGATCTGGAA 58.228 33.333 0.00 0.00 0.00 3.53
120 121 8.206867 CAGTGGATAATAACAAGAAGATCTGGA 58.793 37.037 0.00 0.00 0.00 3.86
121 122 8.206867 TCAGTGGATAATAACAAGAAGATCTGG 58.793 37.037 0.00 0.00 0.00 3.86
122 123 9.039870 GTCAGTGGATAATAACAAGAAGATCTG 57.960 37.037 0.00 0.00 0.00 2.90
123 124 8.762645 TGTCAGTGGATAATAACAAGAAGATCT 58.237 33.333 0.00 0.00 0.00 2.75
124 125 8.821894 GTGTCAGTGGATAATAACAAGAAGATC 58.178 37.037 0.00 0.00 0.00 2.75
125 126 8.321353 TGTGTCAGTGGATAATAACAAGAAGAT 58.679 33.333 0.00 0.00 0.00 2.40
126 127 7.676004 TGTGTCAGTGGATAATAACAAGAAGA 58.324 34.615 0.00 0.00 0.00 2.87
127 128 7.905604 TGTGTCAGTGGATAATAACAAGAAG 57.094 36.000 0.00 0.00 0.00 2.85
128 129 8.100164 TGATGTGTCAGTGGATAATAACAAGAA 58.900 33.333 0.00 0.00 0.00 2.52
129 130 7.619965 TGATGTGTCAGTGGATAATAACAAGA 58.380 34.615 0.00 0.00 0.00 3.02
130 131 7.848223 TGATGTGTCAGTGGATAATAACAAG 57.152 36.000 0.00 0.00 0.00 3.16
131 132 7.848223 CTGATGTGTCAGTGGATAATAACAA 57.152 36.000 0.00 0.00 45.51 2.83
135 136 7.071071 TCCAATCTGATGTGTCAGTGGATAATA 59.929 37.037 11.54 0.00 45.47 0.98
136 137 6.126681 TCCAATCTGATGTGTCAGTGGATAAT 60.127 38.462 11.54 0.00 45.47 1.28
137 138 5.189539 TCCAATCTGATGTGTCAGTGGATAA 59.810 40.000 11.54 0.00 45.47 1.75
138 139 4.716287 TCCAATCTGATGTGTCAGTGGATA 59.284 41.667 11.54 0.00 45.47 2.59
139 140 3.520721 TCCAATCTGATGTGTCAGTGGAT 59.479 43.478 11.54 0.00 45.47 3.41
140 141 2.905736 TCCAATCTGATGTGTCAGTGGA 59.094 45.455 11.54 11.54 46.88 4.02
145 146 4.877823 GCACTAATCCAATCTGATGTGTCA 59.122 41.667 0.00 0.00 0.00 3.58
146 147 5.121811 AGCACTAATCCAATCTGATGTGTC 58.878 41.667 0.00 0.00 0.00 3.67
147 148 5.104610 AGAGCACTAATCCAATCTGATGTGT 60.105 40.000 0.00 0.00 0.00 3.72
148 149 5.366460 AGAGCACTAATCCAATCTGATGTG 58.634 41.667 0.00 0.00 0.00 3.21
149 150 5.627182 AGAGCACTAATCCAATCTGATGT 57.373 39.130 0.00 0.00 0.00 3.06
150 151 8.309656 TGTATAGAGCACTAATCCAATCTGATG 58.690 37.037 0.00 0.00 32.04 3.07
151 152 8.427902 TGTATAGAGCACTAATCCAATCTGAT 57.572 34.615 0.00 0.00 32.04 2.90
152 153 7.839680 TGTATAGAGCACTAATCCAATCTGA 57.160 36.000 0.00 0.00 32.04 3.27
153 154 9.800433 CTATGTATAGAGCACTAATCCAATCTG 57.200 37.037 0.00 0.00 32.05 2.90
154 155 9.760926 TCTATGTATAGAGCACTAATCCAATCT 57.239 33.333 0.00 0.00 34.63 2.40
172 173 8.753133 TGACAATTCTCAGTGAACTCTATGTAT 58.247 33.333 0.00 0.00 37.52 2.29
173 174 8.122472 TGACAATTCTCAGTGAACTCTATGTA 57.878 34.615 0.00 0.00 37.52 2.29
174 175 6.997655 TGACAATTCTCAGTGAACTCTATGT 58.002 36.000 0.00 0.00 37.52 2.29
175 176 7.895975 TTGACAATTCTCAGTGAACTCTATG 57.104 36.000 0.00 0.00 37.52 2.23
176 177 9.512588 AAATTGACAATTCTCAGTGAACTCTAT 57.487 29.630 13.68 0.00 37.52 1.98
177 178 8.908786 AAATTGACAATTCTCAGTGAACTCTA 57.091 30.769 13.68 0.00 37.52 2.43
178 179 7.040823 GGAAATTGACAATTCTCAGTGAACTCT 60.041 37.037 13.68 0.00 37.52 3.24
179 180 7.080724 GGAAATTGACAATTCTCAGTGAACTC 58.919 38.462 13.68 4.06 37.52 3.01
180 181 6.547141 TGGAAATTGACAATTCTCAGTGAACT 59.453 34.615 13.68 0.00 37.52 3.01
181 182 6.638468 GTGGAAATTGACAATTCTCAGTGAAC 59.362 38.462 13.68 2.02 37.52 3.18
182 183 6.513230 CGTGGAAATTGACAATTCTCAGTGAA 60.513 38.462 13.68 0.00 39.24 3.18
183 184 5.049474 CGTGGAAATTGACAATTCTCAGTGA 60.049 40.000 13.68 0.00 0.00 3.41
184 185 5.149273 CGTGGAAATTGACAATTCTCAGTG 58.851 41.667 13.68 7.30 0.00 3.66
185 186 4.821805 ACGTGGAAATTGACAATTCTCAGT 59.178 37.500 13.68 8.12 0.00 3.41
186 187 5.362556 ACGTGGAAATTGACAATTCTCAG 57.637 39.130 13.68 7.58 0.00 3.35
187 188 6.869315 TTACGTGGAAATTGACAATTCTCA 57.131 33.333 13.68 11.71 0.00 3.27
188 189 8.237267 AGATTTACGTGGAAATTGACAATTCTC 58.763 33.333 13.68 12.36 0.00 2.87
189 190 8.110860 AGATTTACGTGGAAATTGACAATTCT 57.889 30.769 13.68 4.86 0.00 2.40
190 191 8.742554 AAGATTTACGTGGAAATTGACAATTC 57.257 30.769 13.68 7.62 0.00 2.17
191 192 9.541143 AAAAGATTTACGTGGAAATTGACAATT 57.459 25.926 7.62 7.62 0.00 2.32
192 193 9.541143 AAAAAGATTTACGTGGAAATTGACAAT 57.459 25.926 0.00 0.00 0.00 2.71
193 194 8.934507 AAAAAGATTTACGTGGAAATTGACAA 57.065 26.923 0.00 0.00 0.00 3.18
196 197 9.685828 CCTTAAAAAGATTTACGTGGAAATTGA 57.314 29.630 0.00 0.00 30.86 2.57
197 198 9.685828 TCCTTAAAAAGATTTACGTGGAAATTG 57.314 29.630 0.00 0.00 30.86 2.32
200 201 9.518906 GTTTCCTTAAAAAGATTTACGTGGAAA 57.481 29.630 0.00 0.73 39.51 3.13
201 202 8.684520 TGTTTCCTTAAAAAGATTTACGTGGAA 58.315 29.630 0.00 0.00 35.56 3.53
202 203 8.223177 TGTTTCCTTAAAAAGATTTACGTGGA 57.777 30.769 0.00 0.00 30.86 4.02
203 204 8.859517 TTGTTTCCTTAAAAAGATTTACGTGG 57.140 30.769 0.00 0.00 30.86 4.94
365 368 7.638295 TGTATCATTGATTTTACGCGAACATTC 59.362 33.333 15.93 4.55 0.00 2.67
366 369 7.468441 TGTATCATTGATTTTACGCGAACATT 58.532 30.769 15.93 0.00 0.00 2.71
368 371 6.410243 TGTATCATTGATTTTACGCGAACA 57.590 33.333 15.93 0.03 0.00 3.18
369 372 5.901884 CCTGTATCATTGATTTTACGCGAAC 59.098 40.000 15.93 0.00 0.00 3.95
371 374 5.353111 TCCTGTATCATTGATTTTACGCGA 58.647 37.500 15.93 0.00 0.00 5.87
372 375 5.651172 TCCTGTATCATTGATTTTACGCG 57.349 39.130 3.53 3.53 0.00 6.01
373 376 9.599322 CTAAATCCTGTATCATTGATTTTACGC 57.401 33.333 4.14 0.00 38.17 4.42
379 382 7.361542 GCGCATCTAAATCCTGTATCATTGATT 60.362 37.037 0.30 0.00 0.00 2.57
381 384 5.409520 GCGCATCTAAATCCTGTATCATTGA 59.590 40.000 0.30 0.00 0.00 2.57
382 385 5.179929 TGCGCATCTAAATCCTGTATCATTG 59.820 40.000 5.66 0.00 0.00 2.82
386 550 5.869753 ATTGCGCATCTAAATCCTGTATC 57.130 39.130 12.75 0.00 0.00 2.24
388 552 5.853936 AGTATTGCGCATCTAAATCCTGTA 58.146 37.500 12.75 0.00 0.00 2.74
391 555 5.934625 CCTAAGTATTGCGCATCTAAATCCT 59.065 40.000 12.75 0.00 0.00 3.24
395 559 5.522460 GTGTCCTAAGTATTGCGCATCTAAA 59.478 40.000 12.75 0.00 0.00 1.85
414 578 4.515191 TGTTCTGTTTTGCTAGATGTGTCC 59.485 41.667 0.00 0.00 0.00 4.02
416 580 6.449635 TTTGTTCTGTTTTGCTAGATGTGT 57.550 33.333 0.00 0.00 0.00 3.72
417 581 7.275341 TGTTTTTGTTCTGTTTTGCTAGATGTG 59.725 33.333 0.00 0.00 0.00 3.21
451 615 6.493189 ACTTCCAATTCTTCTCCCTATCTC 57.507 41.667 0.00 0.00 0.00 2.75
461 625 4.558697 CGGTCCCAAAACTTCCAATTCTTC 60.559 45.833 0.00 0.00 0.00 2.87
462 626 3.320826 CGGTCCCAAAACTTCCAATTCTT 59.679 43.478 0.00 0.00 0.00 2.52
463 627 2.890945 CGGTCCCAAAACTTCCAATTCT 59.109 45.455 0.00 0.00 0.00 2.40
464 628 2.029380 CCGGTCCCAAAACTTCCAATTC 60.029 50.000 0.00 0.00 0.00 2.17
465 629 1.967779 CCGGTCCCAAAACTTCCAATT 59.032 47.619 0.00 0.00 0.00 2.32
466 630 1.627864 CCGGTCCCAAAACTTCCAAT 58.372 50.000 0.00 0.00 0.00 3.16
467 631 0.468400 CCCGGTCCCAAAACTTCCAA 60.468 55.000 0.00 0.00 0.00 3.53
468 632 1.151908 CCCGGTCCCAAAACTTCCA 59.848 57.895 0.00 0.00 0.00 3.53
469 633 1.605451 CCCCGGTCCCAAAACTTCC 60.605 63.158 0.00 0.00 0.00 3.46
470 634 1.605451 CCCCCGGTCCCAAAACTTC 60.605 63.158 0.00 0.00 0.00 3.01
471 635 2.361865 GACCCCCGGTCCCAAAACTT 62.362 60.000 0.00 0.00 46.19 2.66
472 636 2.779598 ACCCCCGGTCCCAAAACT 60.780 61.111 0.00 0.00 0.00 2.66
473 637 2.282674 GACCCCCGGTCCCAAAAC 60.283 66.667 0.00 0.00 46.19 2.43
483 647 4.704833 CAGCCAGTGTGACCCCCG 62.705 72.222 0.00 0.00 0.00 5.73
484 648 4.351054 CCAGCCAGTGTGACCCCC 62.351 72.222 0.00 0.00 0.00 5.40
485 649 2.640581 AAACCAGCCAGTGTGACCCC 62.641 60.000 0.00 0.00 0.00 4.95
486 650 0.109723 TAAACCAGCCAGTGTGACCC 59.890 55.000 0.00 0.00 0.00 4.46
487 651 1.523758 CTAAACCAGCCAGTGTGACC 58.476 55.000 0.00 0.00 0.00 4.02
488 652 0.875059 GCTAAACCAGCCAGTGTGAC 59.125 55.000 0.00 0.00 45.23 3.67
489 653 3.322514 GCTAAACCAGCCAGTGTGA 57.677 52.632 0.00 0.00 45.23 3.58
498 662 0.605319 TCCCGTTGCAGCTAAACCAG 60.605 55.000 0.00 0.00 0.00 4.00
499 663 0.605319 CTCCCGTTGCAGCTAAACCA 60.605 55.000 0.00 0.00 0.00 3.67
500 664 1.305930 CCTCCCGTTGCAGCTAAACC 61.306 60.000 0.00 0.00 0.00 3.27
501 665 1.305930 CCCTCCCGTTGCAGCTAAAC 61.306 60.000 0.00 0.00 0.00 2.01
502 666 1.002624 CCCTCCCGTTGCAGCTAAA 60.003 57.895 0.00 0.00 0.00 1.85
503 667 2.668632 CCCTCCCGTTGCAGCTAA 59.331 61.111 0.00 0.00 0.00 3.09
504 668 3.399181 CCCCTCCCGTTGCAGCTA 61.399 66.667 0.00 0.00 0.00 3.32
507 671 2.478335 TTTAGCCCCTCCCGTTGCAG 62.478 60.000 0.00 0.00 0.00 4.41
508 672 2.478335 CTTTAGCCCCTCCCGTTGCA 62.478 60.000 0.00 0.00 0.00 4.08
509 673 1.749258 CTTTAGCCCCTCCCGTTGC 60.749 63.158 0.00 0.00 0.00 4.17
510 674 0.546598 ATCTTTAGCCCCTCCCGTTG 59.453 55.000 0.00 0.00 0.00 4.10
511 675 0.546598 CATCTTTAGCCCCTCCCGTT 59.453 55.000 0.00 0.00 0.00 4.44
512 676 1.984288 GCATCTTTAGCCCCTCCCGT 61.984 60.000 0.00 0.00 0.00 5.28
513 677 1.227973 GCATCTTTAGCCCCTCCCG 60.228 63.158 0.00 0.00 0.00 5.14
514 678 0.179006 CTGCATCTTTAGCCCCTCCC 60.179 60.000 0.00 0.00 0.00 4.30
515 679 0.821301 GCTGCATCTTTAGCCCCTCC 60.821 60.000 0.00 0.00 33.89 4.30
516 680 0.107017 TGCTGCATCTTTAGCCCCTC 60.107 55.000 0.00 0.00 39.15 4.30
517 681 0.106819 CTGCTGCATCTTTAGCCCCT 60.107 55.000 1.31 0.00 39.15 4.79
518 682 1.732417 GCTGCTGCATCTTTAGCCCC 61.732 60.000 11.11 0.00 39.15 5.80
519 683 1.033746 TGCTGCTGCATCTTTAGCCC 61.034 55.000 14.93 0.00 45.31 5.19
520 684 2.485677 TGCTGCTGCATCTTTAGCC 58.514 52.632 14.93 0.00 45.31 3.93
544 835 2.064762 GATTCCTCGATGATTGGCTCG 58.935 52.381 0.00 0.00 36.25 5.03
606 897 1.725665 CTGCCATGGACAATGCTCG 59.274 57.895 18.40 0.00 34.67 5.03
821 1129 3.202097 GTTGCTCTAGATTTCCTCTGGC 58.798 50.000 0.00 0.00 35.28 4.85
902 1210 5.249393 GGATAGATGGAGAGAGAGAGAGAGT 59.751 48.000 0.00 0.00 0.00 3.24
908 1216 5.394562 TGTTGGATAGATGGAGAGAGAGA 57.605 43.478 0.00 0.00 0.00 3.10
909 1217 5.362143 TGTTGTTGGATAGATGGAGAGAGAG 59.638 44.000 0.00 0.00 0.00 3.20
910 1218 5.272402 TGTTGTTGGATAGATGGAGAGAGA 58.728 41.667 0.00 0.00 0.00 3.10
911 1219 5.453057 CCTGTTGTTGGATAGATGGAGAGAG 60.453 48.000 0.00 0.00 0.00 3.20
912 1220 4.406972 CCTGTTGTTGGATAGATGGAGAGA 59.593 45.833 0.00 0.00 0.00 3.10
913 1221 4.406972 TCCTGTTGTTGGATAGATGGAGAG 59.593 45.833 0.00 0.00 0.00 3.20
914 1222 4.361783 TCCTGTTGTTGGATAGATGGAGA 58.638 43.478 0.00 0.00 0.00 3.71
943 1251 3.182152 TCCCTCCTCCTTGGTCTTAAAG 58.818 50.000 0.00 0.00 37.07 1.85
1023 1340 4.034258 GTGACGGCCGTCTCGACA 62.034 66.667 46.72 31.32 44.80 4.35
1407 1727 7.818997 ATCTGTTACATATACGTGGAAGAGA 57.181 36.000 0.00 0.00 43.81 3.10
1420 1740 8.450964 GTCAAAAAGCTAGCAATCTGTTACATA 58.549 33.333 18.83 0.00 0.00 2.29
1422 1742 6.293955 GGTCAAAAAGCTAGCAATCTGTTACA 60.294 38.462 18.83 0.00 0.00 2.41
1424 1744 5.767665 TGGTCAAAAAGCTAGCAATCTGTTA 59.232 36.000 18.83 0.00 0.00 2.41
1453 1773 3.664107 TCCTTGTTGATGTCAGTAGTGC 58.336 45.455 0.00 0.00 0.00 4.40
1454 1774 5.056480 TGTTCCTTGTTGATGTCAGTAGTG 58.944 41.667 0.00 0.00 0.00 2.74
1455 1775 5.290493 TGTTCCTTGTTGATGTCAGTAGT 57.710 39.130 0.00 0.00 0.00 2.73
1456 1776 6.808008 AATGTTCCTTGTTGATGTCAGTAG 57.192 37.500 0.00 0.00 0.00 2.57
1497 1829 8.202745 TGAGCATCACGATATGTATACTCTAG 57.797 38.462 4.17 0.00 42.56 2.43
1521 1853 7.495606 TCTGCACACAGTGGATTAATTACTATG 59.504 37.037 5.31 9.31 44.77 2.23
1523 1855 6.941857 TCTGCACACAGTGGATTAATTACTA 58.058 36.000 5.31 0.00 44.77 1.82
1605 1974 2.233271 ACAAAAGCTGGTGATGGTGAG 58.767 47.619 3.99 0.00 0.00 3.51
1606 1975 2.363306 ACAAAAGCTGGTGATGGTGA 57.637 45.000 3.99 0.00 0.00 4.02
1607 1976 4.789012 ATTACAAAAGCTGGTGATGGTG 57.211 40.909 3.99 0.00 0.00 4.17
1611 1980 8.049117 TCAGAAGATATTACAAAAGCTGGTGAT 58.951 33.333 3.99 0.79 0.00 3.06
1612 1981 7.394016 TCAGAAGATATTACAAAAGCTGGTGA 58.606 34.615 3.99 0.00 0.00 4.02
1614 1983 8.635765 TTTCAGAAGATATTACAAAAGCTGGT 57.364 30.769 0.00 0.00 0.00 4.00
1633 2016 4.979943 TGGCGATGCAAATTATTTCAGA 57.020 36.364 0.00 0.00 0.00 3.27
1656 2039 3.157087 AGCAGTGGGATCGAAACAAAAT 58.843 40.909 0.00 0.00 0.00 1.82
1713 2105 4.228567 TCGTGTCTGCCGCCACAA 62.229 61.111 0.00 0.00 0.00 3.33
1943 2344 1.797635 GTACTACTACCTAGAGGCGCG 59.202 57.143 0.00 0.00 39.32 6.86
1944 2345 2.807392 CTGTACTACTACCTAGAGGCGC 59.193 54.545 0.00 0.00 39.32 6.53
1945 2346 4.070630 ACTGTACTACTACCTAGAGGCG 57.929 50.000 0.00 0.00 39.32 5.52
1946 2347 7.452562 AGATAACTGTACTACTACCTAGAGGC 58.547 42.308 0.00 0.00 39.32 4.70
1984 2387 2.483877 CTGCTCCGCATGTGAACTTTAA 59.516 45.455 8.11 0.00 38.13 1.52
1985 2388 2.076100 CTGCTCCGCATGTGAACTTTA 58.924 47.619 8.11 0.00 38.13 1.85
2025 2428 1.534595 ACACTCGGTCAGTCGTTAGTC 59.465 52.381 0.00 0.00 30.26 2.59
2027 2430 1.266175 ACACACTCGGTCAGTCGTTAG 59.734 52.381 0.00 0.00 30.26 2.34
2028 2431 1.002142 CACACACTCGGTCAGTCGTTA 60.002 52.381 0.00 0.00 30.26 3.18
2029 2432 0.248907 CACACACTCGGTCAGTCGTT 60.249 55.000 0.00 0.00 30.26 3.85
2244 2751 1.927371 GGGGAAGGAAGGTTAATGGGA 59.073 52.381 0.00 0.00 0.00 4.37
2261 2768 1.472480 CCGCACAGTGAAATTTAGGGG 59.528 52.381 4.15 0.00 0.00 4.79
2287 2807 5.806654 AACAGCTGGTTGGAAAATTATGT 57.193 34.783 19.93 0.00 38.60 2.29
2350 2882 3.226029 GCAAGACGCTCGATTAATGAC 57.774 47.619 0.00 0.00 37.77 3.06
2362 2894 2.853914 GTCGTTGGAGCAAGACGC 59.146 61.111 0.00 0.00 42.91 5.19
2364 2896 2.668280 GGCGTCGTTGGAGCAAGAC 61.668 63.158 0.00 0.00 0.00 3.01
2365 2897 2.357034 GGCGTCGTTGGAGCAAGA 60.357 61.111 0.00 0.00 0.00 3.02
2366 2898 2.664851 TGGCGTCGTTGGAGCAAG 60.665 61.111 0.00 0.00 0.00 4.01
2367 2899 2.970324 GTGGCGTCGTTGGAGCAA 60.970 61.111 0.00 0.00 0.00 3.91
2368 2900 4.228567 TGTGGCGTCGTTGGAGCA 62.229 61.111 0.00 0.00 0.00 4.26
2369 2901 3.712881 GTGTGGCGTCGTTGGAGC 61.713 66.667 0.00 0.00 0.00 4.70
2370 2902 1.157870 AAAGTGTGGCGTCGTTGGAG 61.158 55.000 0.00 0.00 0.00 3.86
2371 2903 0.745128 AAAAGTGTGGCGTCGTTGGA 60.745 50.000 0.00 0.00 0.00 3.53
2372 2904 0.938713 TAAAAGTGTGGCGTCGTTGG 59.061 50.000 0.00 0.00 0.00 3.77
2373 2905 1.595794 AGTAAAAGTGTGGCGTCGTTG 59.404 47.619 0.00 0.00 0.00 4.10
2374 2906 1.862827 GAGTAAAAGTGTGGCGTCGTT 59.137 47.619 0.00 0.00 0.00 3.85
2375 2907 1.068127 AGAGTAAAAGTGTGGCGTCGT 59.932 47.619 0.00 0.00 0.00 4.34
2376 2908 1.719780 GAGAGTAAAAGTGTGGCGTCG 59.280 52.381 0.00 0.00 0.00 5.12
2377 2909 2.987821 GAGAGAGTAAAAGTGTGGCGTC 59.012 50.000 0.00 0.00 0.00 5.19
2378 2910 2.288886 GGAGAGAGTAAAAGTGTGGCGT 60.289 50.000 0.00 0.00 0.00 5.68
2417 2949 9.760077 CCTGAAAAGTACTTCTTAGTCTAAACA 57.240 33.333 8.95 0.00 35.02 2.83
2418 2950 8.710551 GCCTGAAAAGTACTTCTTAGTCTAAAC 58.289 37.037 8.95 0.00 35.02 2.01
2419 2951 8.426489 TGCCTGAAAAGTACTTCTTAGTCTAAA 58.574 33.333 8.95 0.00 35.02 1.85
2421 2953 7.376615 GTGCCTGAAAAGTACTTCTTAGTCTA 58.623 38.462 8.95 0.00 35.02 2.59
2422 2954 6.224584 GTGCCTGAAAAGTACTTCTTAGTCT 58.775 40.000 8.95 0.00 35.02 3.24
2425 2957 4.389077 CGGTGCCTGAAAAGTACTTCTTAG 59.611 45.833 8.95 0.69 35.02 2.18
2426 2958 4.039488 TCGGTGCCTGAAAAGTACTTCTTA 59.961 41.667 8.95 0.00 35.02 2.10
2428 2960 2.367567 TCGGTGCCTGAAAAGTACTTCT 59.632 45.455 8.95 0.00 0.00 2.85
2429 2961 2.762745 TCGGTGCCTGAAAAGTACTTC 58.237 47.619 8.95 0.00 0.00 3.01
2430 2962 2.922740 TCGGTGCCTGAAAAGTACTT 57.077 45.000 1.12 1.12 0.00 2.24
2431 2963 3.369157 GGTATCGGTGCCTGAAAAGTACT 60.369 47.826 0.00 0.00 0.00 2.73
2432 2964 2.934553 GGTATCGGTGCCTGAAAAGTAC 59.065 50.000 0.00 0.00 0.00 2.73
2433 2965 2.568062 TGGTATCGGTGCCTGAAAAGTA 59.432 45.455 3.88 0.00 0.00 2.24
2434 2966 1.349688 TGGTATCGGTGCCTGAAAAGT 59.650 47.619 3.88 0.00 0.00 2.66
2436 2968 1.072489 TGTGGTATCGGTGCCTGAAAA 59.928 47.619 3.88 0.00 0.00 2.29
2437 2969 0.687920 TGTGGTATCGGTGCCTGAAA 59.312 50.000 3.88 0.00 0.00 2.69
2438 2970 0.036765 GTGTGGTATCGGTGCCTGAA 60.037 55.000 3.88 0.00 0.00 3.02
2439 2971 1.594833 GTGTGGTATCGGTGCCTGA 59.405 57.895 3.88 0.00 0.00 3.86
2440 2972 1.809619 CGTGTGGTATCGGTGCCTG 60.810 63.158 3.88 0.00 0.00 4.85
2450 3109 2.888414 TGAGTCACTCAATCGTGTGGTA 59.112 45.455 4.55 0.00 37.57 3.25
2553 3219 9.929180 GTCCAACTGAGTATAGCATATAATGAA 57.071 33.333 0.00 0.00 0.00 2.57
2678 3344 6.720748 TGCTACCAATATCATGTGGCATATTT 59.279 34.615 0.00 0.00 40.82 1.40
2705 3373 4.157840 GGAAATTAAGACCGCATTTGTCCT 59.842 41.667 0.00 0.00 33.09 3.85
2716 3384 0.738975 GCGCCTGGGAAATTAAGACC 59.261 55.000 0.00 0.00 0.00 3.85
2736 3404 3.106242 TGTATTCTTGTGCGTCACAGT 57.894 42.857 11.48 4.54 45.39 3.55
2738 3406 2.223144 GCTTGTATTCTTGTGCGTCACA 59.777 45.455 8.32 8.32 43.02 3.58
2765 3435 0.819259 ATCTGCGTGTGCCTTGTGTT 60.819 50.000 0.00 0.00 41.78 3.32
2768 3438 1.968017 CCATCTGCGTGTGCCTTGT 60.968 57.895 0.00 0.00 41.78 3.16
2769 3439 1.518056 AACCATCTGCGTGTGCCTTG 61.518 55.000 0.00 0.00 41.78 3.61
2770 3440 1.228245 AACCATCTGCGTGTGCCTT 60.228 52.632 0.00 0.00 41.78 4.35
2773 3443 2.562912 CCAACCATCTGCGTGTGC 59.437 61.111 0.00 0.00 43.20 4.57
2774 3444 1.577328 GACCCAACCATCTGCGTGTG 61.577 60.000 0.00 0.00 0.00 3.82
2775 3445 1.302511 GACCCAACCATCTGCGTGT 60.303 57.895 0.00 0.00 0.00 4.49
2776 3446 2.040544 GGACCCAACCATCTGCGTG 61.041 63.158 0.00 0.00 0.00 5.34
2778 3448 0.609131 AAAGGACCCAACCATCTGCG 60.609 55.000 0.00 0.00 0.00 5.18
2779 3449 1.273327 CAAAAGGACCCAACCATCTGC 59.727 52.381 0.00 0.00 0.00 4.26
2780 3450 1.895131 CCAAAAGGACCCAACCATCTG 59.105 52.381 0.00 0.00 0.00 2.90
2782 3452 2.302587 TCCAAAAGGACCCAACCATC 57.697 50.000 0.00 0.00 0.00 3.51
2783 3453 2.785357 TTCCAAAAGGACCCAACCAT 57.215 45.000 0.00 0.00 0.00 3.55
2784 3454 2.703007 CAATTCCAAAAGGACCCAACCA 59.297 45.455 0.00 0.00 0.00 3.67
2838 3523 9.450807 CAGTTGACGAATAGATTGAAAGTTTTT 57.549 29.630 0.00 0.00 0.00 1.94
2840 3525 8.154649 ACAGTTGACGAATAGATTGAAAGTTT 57.845 30.769 0.00 0.00 0.00 2.66
2841 3526 7.441157 TGACAGTTGACGAATAGATTGAAAGTT 59.559 33.333 0.00 0.00 0.00 2.66
2842 3527 6.929049 TGACAGTTGACGAATAGATTGAAAGT 59.071 34.615 0.00 0.00 0.00 2.66
2844 3529 7.655732 TCTTGACAGTTGACGAATAGATTGAAA 59.344 33.333 0.00 0.00 0.00 2.69
2845 3530 7.151976 TCTTGACAGTTGACGAATAGATTGAA 58.848 34.615 0.00 0.00 0.00 2.69
2846 3531 6.687604 TCTTGACAGTTGACGAATAGATTGA 58.312 36.000 0.00 0.00 0.00 2.57
2847 3532 6.951256 TCTTGACAGTTGACGAATAGATTG 57.049 37.500 0.00 0.00 0.00 2.67
2848 3533 7.436673 GCTATCTTGACAGTTGACGAATAGATT 59.563 37.037 0.00 0.00 0.00 2.40
2849 3534 6.920758 GCTATCTTGACAGTTGACGAATAGAT 59.079 38.462 0.00 0.00 0.00 1.98
2850 3535 6.127730 TGCTATCTTGACAGTTGACGAATAGA 60.128 38.462 0.00 0.00 0.00 1.98
2851 3536 6.020281 GTGCTATCTTGACAGTTGACGAATAG 60.020 42.308 0.00 0.00 0.00 1.73
2853 3538 4.627467 GTGCTATCTTGACAGTTGACGAAT 59.373 41.667 0.00 0.00 0.00 3.34
2854 3539 3.987868 GTGCTATCTTGACAGTTGACGAA 59.012 43.478 0.00 0.00 0.00 3.85
2855 3540 3.005367 TGTGCTATCTTGACAGTTGACGA 59.995 43.478 0.00 0.00 0.00 4.20
2856 3541 3.317150 TGTGCTATCTTGACAGTTGACG 58.683 45.455 0.00 0.00 0.00 4.35
2857 3542 5.673337 TTTGTGCTATCTTGACAGTTGAC 57.327 39.130 0.00 0.00 0.00 3.18
2858 3543 6.691754 TTTTTGTGCTATCTTGACAGTTGA 57.308 33.333 0.00 0.00 0.00 3.18
2878 3563 9.378551 GGAGGAATTTTTACTTCTGTTGTTTTT 57.621 29.630 0.00 0.00 0.00 1.94
2879 3564 8.758829 AGGAGGAATTTTTACTTCTGTTGTTTT 58.241 29.630 0.00 0.00 0.00 2.43
2880 3565 8.306313 AGGAGGAATTTTTACTTCTGTTGTTT 57.694 30.769 0.00 0.00 0.00 2.83
2881 3566 7.780271 AGAGGAGGAATTTTTACTTCTGTTGTT 59.220 33.333 0.00 0.00 0.00 2.83
2882 3567 7.290813 AGAGGAGGAATTTTTACTTCTGTTGT 58.709 34.615 0.00 0.00 0.00 3.32
2883 3568 7.751768 AGAGGAGGAATTTTTACTTCTGTTG 57.248 36.000 0.00 0.00 0.00 3.33
2884 3569 9.862149 TTAAGAGGAGGAATTTTTACTTCTGTT 57.138 29.630 0.00 0.00 29.67 3.16
2890 3575 9.110502 CGCTAATTAAGAGGAGGAATTTTTACT 57.889 33.333 0.00 0.00 0.00 2.24
2891 3576 7.856398 GCGCTAATTAAGAGGAGGAATTTTTAC 59.144 37.037 0.00 0.00 0.00 2.01
2892 3577 7.554835 TGCGCTAATTAAGAGGAGGAATTTTTA 59.445 33.333 9.73 0.00 0.00 1.52
2893 3578 6.377146 TGCGCTAATTAAGAGGAGGAATTTTT 59.623 34.615 9.73 0.00 0.00 1.94
2894 3579 5.885912 TGCGCTAATTAAGAGGAGGAATTTT 59.114 36.000 9.73 0.00 0.00 1.82
2895 3580 5.437060 TGCGCTAATTAAGAGGAGGAATTT 58.563 37.500 9.73 0.00 0.00 1.82
2896 3581 5.036117 TGCGCTAATTAAGAGGAGGAATT 57.964 39.130 9.73 0.00 0.00 2.17
2897 3582 4.689612 TGCGCTAATTAAGAGGAGGAAT 57.310 40.909 9.73 0.00 0.00 3.01
2899 3584 4.833380 AGTATGCGCTAATTAAGAGGAGGA 59.167 41.667 9.73 0.00 0.00 3.71
2900 3585 5.140747 AGTATGCGCTAATTAAGAGGAGG 57.859 43.478 9.73 0.00 0.00 4.30
2965 3708 1.713005 TAGTCGATCTAGGCCGGGGT 61.713 60.000 2.18 0.00 0.00 4.95
3000 3744 9.655769 CTAACATTTCTGTCGATCCAATTATTG 57.344 33.333 0.00 0.00 33.36 1.90
3001 3745 9.396022 ACTAACATTTCTGTCGATCCAATTATT 57.604 29.630 0.00 0.00 33.36 1.40
3002 3746 8.964476 ACTAACATTTCTGTCGATCCAATTAT 57.036 30.769 0.00 0.00 33.36 1.28
3016 3760 7.383687 TCCGTCATTGTTCTACTAACATTTCT 58.616 34.615 0.00 0.00 0.00 2.52
3017 3761 7.331193 ACTCCGTCATTGTTCTACTAACATTTC 59.669 37.037 0.00 0.00 0.00 2.17
3034 3778 3.811083 CTGAGGTCTACTACTCCGTCAT 58.189 50.000 0.00 0.00 32.80 3.06
3038 3782 2.158871 AGAGCTGAGGTCTACTACTCCG 60.159 54.545 13.18 0.00 38.70 4.63
3039 3783 3.118186 TCAGAGCTGAGGTCTACTACTCC 60.118 52.174 14.46 0.00 38.40 3.85
3043 3787 3.459969 TCCATCAGAGCTGAGGTCTACTA 59.540 47.826 14.46 3.55 43.61 1.82
3091 3835 9.539825 CAATCTCTTATGACAGCACTTATTAGT 57.460 33.333 0.00 0.00 34.00 2.24
3092 3836 9.755804 TCAATCTCTTATGACAGCACTTATTAG 57.244 33.333 0.00 0.00 0.00 1.73
3095 3841 7.790027 AGTCAATCTCTTATGACAGCACTTAT 58.210 34.615 8.43 0.00 46.55 1.73
3098 3844 5.674052 AGTCAATCTCTTATGACAGCACT 57.326 39.130 8.43 0.00 46.55 4.40
3102 3848 8.037758 ACCTGTTTAGTCAATCTCTTATGACAG 58.962 37.037 8.43 0.00 46.55 3.51
3107 3853 6.407074 CGGGACCTGTTTAGTCAATCTCTTAT 60.407 42.308 0.00 0.00 35.89 1.73
3143 3921 1.338655 CTCTAGGCTTCTTCTACCCGC 59.661 57.143 0.00 0.00 0.00 6.13
3182 3970 3.449746 AATCATTCCAAGGGTTCCGAA 57.550 42.857 0.00 0.00 0.00 4.30
3282 4074 4.284746 AGTGGGTTCCAAAACACTGAAAAA 59.715 37.500 0.00 0.00 42.14 1.94
3327 4119 2.691526 TGAGTTCACACGAAGGTACAGT 59.308 45.455 0.00 0.00 0.00 3.55
3329 4121 3.088194 GTGAGTTCACACGAAGGTACA 57.912 47.619 7.37 0.00 45.75 2.90
3345 4137 0.453793 CAGTAGCAGAGTCGGGTGAG 59.546 60.000 5.17 0.00 0.00 3.51
3374 4222 8.200792 GGACAGAAGAAGTCACATTAGATACAT 58.799 37.037 0.00 0.00 37.74 2.29
3375 4223 7.178451 TGGACAGAAGAAGTCACATTAGATACA 59.822 37.037 0.00 0.00 37.74 2.29
3376 4224 7.548097 TGGACAGAAGAAGTCACATTAGATAC 58.452 38.462 0.00 0.00 37.74 2.24
3492 4340 7.954788 AGATATCGGAGAGCTAATTTGTTTC 57.045 36.000 0.00 0.00 43.63 2.78
3493 4341 7.987458 TGAAGATATCGGAGAGCTAATTTGTTT 59.013 33.333 0.00 0.00 43.63 2.83
3496 4344 7.151308 ACTGAAGATATCGGAGAGCTAATTTG 58.849 38.462 0.00 0.00 43.63 2.32
3497 4345 7.014711 TGACTGAAGATATCGGAGAGCTAATTT 59.985 37.037 0.00 0.00 43.63 1.82
3498 4346 6.491745 TGACTGAAGATATCGGAGAGCTAATT 59.508 38.462 0.00 0.00 43.63 1.40
3500 4348 5.239744 GTGACTGAAGATATCGGAGAGCTAA 59.760 44.000 0.00 0.00 43.63 3.09
3501 4349 4.757657 GTGACTGAAGATATCGGAGAGCTA 59.242 45.833 0.00 0.00 43.63 3.32
3502 4350 3.568007 GTGACTGAAGATATCGGAGAGCT 59.432 47.826 0.00 0.00 43.63 4.09
3503 4351 3.568007 AGTGACTGAAGATATCGGAGAGC 59.432 47.826 0.00 0.00 43.63 4.09
3527 4375 2.939103 AGTGATTGCGATCCAGTAAAGC 59.061 45.455 11.55 0.00 0.00 3.51
3528 4376 5.580691 TGTTAGTGATTGCGATCCAGTAAAG 59.419 40.000 11.55 0.00 0.00 1.85
3544 4392 6.796208 GTGATTACCACCACTCATGTTAGTGA 60.796 42.308 14.48 0.00 45.39 3.41
3545 4393 5.351465 GTGATTACCACCACTCATGTTAGTG 59.649 44.000 7.43 7.43 45.33 2.74
3546 4394 5.012664 TGTGATTACCACCACTCATGTTAGT 59.987 40.000 0.00 0.00 45.09 2.24
3549 4397 4.326826 CTGTGATTACCACCACTCATGTT 58.673 43.478 0.00 0.00 45.09 2.71
3553 4401 1.628340 CCCTGTGATTACCACCACTCA 59.372 52.381 0.00 0.00 45.09 3.41
3554 4402 1.065418 CCCCTGTGATTACCACCACTC 60.065 57.143 0.00 0.00 45.09 3.51
3556 4404 0.988832 TCCCCTGTGATTACCACCAC 59.011 55.000 0.00 0.00 45.09 4.16
3557 4405 1.285280 CTCCCCTGTGATTACCACCA 58.715 55.000 0.00 0.00 45.09 4.17
3558 4406 0.546598 CCTCCCCTGTGATTACCACC 59.453 60.000 0.00 0.00 45.09 4.61
3562 4410 3.773119 TGTACTTCCTCCCCTGTGATTAC 59.227 47.826 0.00 0.00 0.00 1.89
3817 4674 0.659427 ATTTGCGCGTGATGATGAGG 59.341 50.000 8.43 0.00 0.00 3.86
3818 4675 2.223089 TGAATTTGCGCGTGATGATGAG 60.223 45.455 8.43 0.00 0.00 2.90
3819 4676 1.736681 TGAATTTGCGCGTGATGATGA 59.263 42.857 8.43 0.00 0.00 2.92
3829 4686 0.376852 TACATCGGCTGAATTTGCGC 59.623 50.000 0.00 0.00 0.00 6.09
3836 4693 4.793071 CAAACAAACATACATCGGCTGAA 58.207 39.130 0.00 0.00 0.00 3.02
3838 4695 2.916716 GCAAACAAACATACATCGGCTG 59.083 45.455 0.00 0.00 0.00 4.85
3839 4696 2.556189 TGCAAACAAACATACATCGGCT 59.444 40.909 0.00 0.00 0.00 5.52
3840 4697 2.661195 GTGCAAACAAACATACATCGGC 59.339 45.455 0.00 0.00 0.00 5.54
3841 4698 2.908009 CGTGCAAACAAACATACATCGG 59.092 45.455 0.00 0.00 0.00 4.18
3843 4700 2.661195 GCCGTGCAAACAAACATACATC 59.339 45.455 0.00 0.00 0.00 3.06
3844 4701 2.671596 GCCGTGCAAACAAACATACAT 58.328 42.857 0.00 0.00 0.00 2.29
3845 4702 1.598183 CGCCGTGCAAACAAACATACA 60.598 47.619 0.00 0.00 0.00 2.29
3846 4703 1.049251 CGCCGTGCAAACAAACATAC 58.951 50.000 0.00 0.00 0.00 2.39
3847 4704 0.945099 TCGCCGTGCAAACAAACATA 59.055 45.000 0.00 0.00 0.00 2.29
3848 4705 0.101399 TTCGCCGTGCAAACAAACAT 59.899 45.000 0.00 0.00 0.00 2.71
3858 4715 2.504681 CCTGCATTTTCGCCGTGC 60.505 61.111 0.00 0.00 39.26 5.34
3886 4743 6.222389 CCTGAAACAGGCAATAAATTGTTCA 58.778 36.000 4.84 5.40 45.13 3.18
3928 4792 1.751351 TCTGATCGTGGCGAAAGATCT 59.249 47.619 13.69 0.00 42.41 2.75
4044 4908 2.535984 CAGACGATTTACAGGCATCGAC 59.464 50.000 10.61 5.11 44.18 4.20
4061 4925 3.564225 ACACATTTCGTTCCTTTCCAGAC 59.436 43.478 0.00 0.00 0.00 3.51
4071 4935 2.155155 GTCCGTCAGACACATTTCGTTC 59.845 50.000 0.41 0.00 45.55 3.95
4403 5287 2.868583 CAGAAGGCAATGTCGATCGATT 59.131 45.455 22.50 9.76 0.00 3.34
4422 5307 4.202141 CTGGAAGATACTCCTTCAGAGCAG 60.202 50.000 0.00 0.00 41.36 4.24
4423 5308 3.703556 CTGGAAGATACTCCTTCAGAGCA 59.296 47.826 0.00 0.00 41.36 4.26
4424 5309 3.492482 GCTGGAAGATACTCCTTCAGAGC 60.492 52.174 0.00 0.00 41.36 4.09
4427 5312 3.181467 CCTGCTGGAAGATACTCCTTCAG 60.181 52.174 2.92 0.00 43.19 3.02
4428 5313 2.768527 CCTGCTGGAAGATACTCCTTCA 59.231 50.000 2.92 0.00 43.19 3.02
4429 5314 2.769095 ACCTGCTGGAAGATACTCCTTC 59.231 50.000 17.64 0.00 41.26 3.46
4430 5315 2.769095 GACCTGCTGGAAGATACTCCTT 59.231 50.000 17.64 0.00 36.35 3.36
4449 5365 3.449018 TCAGCCCTAAGAATGTCAGAGAC 59.551 47.826 0.00 0.00 0.00 3.36
4713 5637 3.426159 GCACCCACATCGAACTTTACATG 60.426 47.826 0.00 0.00 0.00 3.21
4731 5655 5.611374 ACAACACCTACATATATGAGCACC 58.389 41.667 19.63 0.00 0.00 5.01
4744 5668 5.245531 TGATCCTGAATCAACAACACCTAC 58.754 41.667 0.00 0.00 41.49 3.18
4859 5783 4.136796 AGCACATGTAAAACTTCTCTGCA 58.863 39.130 0.00 0.00 0.00 4.41
4860 5784 4.756084 AGCACATGTAAAACTTCTCTGC 57.244 40.909 0.00 0.00 0.00 4.26
4876 5803 5.921962 ATGTTCAGTATCAGTCTAGCACA 57.078 39.130 0.00 0.00 0.00 4.57
4934 5861 2.865119 TGTTCACCACATCTGCAGAT 57.135 45.000 23.75 23.75 34.56 2.90
4987 5914 3.378112 CAGAGACTCTAGCTCCTTGTGAG 59.622 52.174 4.22 0.00 44.47 3.51
5000 5927 1.007721 ACCTGTATGCCCAGAGACTCT 59.992 52.381 0.00 0.00 34.23 3.24
5002 5929 1.198713 CACCTGTATGCCCAGAGACT 58.801 55.000 0.00 0.00 34.23 3.24
5039 5966 6.403866 ACAAAGGTACAATTTTGATGCTCA 57.596 33.333 17.99 0.00 37.63 4.26
5040 5967 5.863935 GGACAAAGGTACAATTTTGATGCTC 59.136 40.000 17.99 8.84 37.63 4.26
5044 5971 9.108284 CTTTTTGGACAAAGGTACAATTTTGAT 57.892 29.630 17.99 7.27 46.92 2.57
5045 5972 7.550906 CCTTTTTGGACAAAGGTACAATTTTGA 59.449 33.333 17.99 0.56 46.92 2.69
5046 5973 7.550906 TCCTTTTTGGACAAAGGTACAATTTTG 59.449 33.333 11.15 12.44 46.92 2.44
5047 5974 7.625469 TCCTTTTTGGACAAAGGTACAATTTT 58.375 30.769 11.15 0.00 46.92 1.82
5070 6001 9.274206 GACCAGTAATAACTTGGAGATATTTCC 57.726 37.037 5.31 5.31 33.88 3.13
5405 6343 6.993902 AGTTAAATGTCTTTGGTTTCTACGGA 59.006 34.615 0.00 0.00 0.00 4.69
5415 6353 6.391227 ACCACTTCAGTTAAATGTCTTTGG 57.609 37.500 2.43 8.08 0.00 3.28
5420 6358 8.773404 ACTGTATACCACTTCAGTTAAATGTC 57.227 34.615 2.43 0.00 37.81 3.06
5568 6510 2.409870 GGCCCATGGTTCTTGAGCG 61.410 63.158 11.73 0.00 0.00 5.03
5569 6511 2.409870 CGGCCCATGGTTCTTGAGC 61.410 63.158 11.73 4.58 0.00 4.26
5570 6512 0.609131 AACGGCCCATGGTTCTTGAG 60.609 55.000 11.73 0.00 0.00 3.02
5571 6513 0.893270 CAACGGCCCATGGTTCTTGA 60.893 55.000 11.73 0.00 0.00 3.02
5572 6514 1.586028 CAACGGCCCATGGTTCTTG 59.414 57.895 11.73 2.83 0.00 3.02
5573 6515 1.606313 CCAACGGCCCATGGTTCTT 60.606 57.895 11.73 0.00 31.84 2.52
5574 6516 1.863155 ATCCAACGGCCCATGGTTCT 61.863 55.000 18.44 5.16 37.94 3.01
5575 6517 0.106918 TATCCAACGGCCCATGGTTC 60.107 55.000 18.44 1.51 37.94 3.62
5576 6518 0.555769 ATATCCAACGGCCCATGGTT 59.444 50.000 18.44 13.77 37.94 3.67
5577 6519 0.178992 CATATCCAACGGCCCATGGT 60.179 55.000 18.44 10.27 37.94 3.55
5578 6520 0.178992 ACATATCCAACGGCCCATGG 60.179 55.000 14.11 14.11 38.09 3.66
5579 6521 1.691196 AACATATCCAACGGCCCATG 58.309 50.000 0.00 0.00 0.00 3.66
5580 6522 2.452600 AAACATATCCAACGGCCCAT 57.547 45.000 0.00 0.00 0.00 4.00
5581 6523 2.223803 AAAACATATCCAACGGCCCA 57.776 45.000 0.00 0.00 0.00 5.36
5582 6524 2.494073 TGAAAAACATATCCAACGGCCC 59.506 45.455 0.00 0.00 0.00 5.80
5583 6525 3.442273 TCTGAAAAACATATCCAACGGCC 59.558 43.478 0.00 0.00 0.00 6.13
5584 6526 4.695217 TCTGAAAAACATATCCAACGGC 57.305 40.909 0.00 0.00 0.00 5.68
5585 6527 5.856455 GTGTTCTGAAAAACATATCCAACGG 59.144 40.000 0.00 0.00 40.96 4.44
5586 6528 6.434596 TGTGTTCTGAAAAACATATCCAACG 58.565 36.000 3.73 0.00 40.96 4.10
5587 6529 8.134895 TCTTGTGTTCTGAAAAACATATCCAAC 58.865 33.333 7.70 0.00 40.96 3.77
5588 6530 8.231692 TCTTGTGTTCTGAAAAACATATCCAA 57.768 30.769 7.70 0.00 40.96 3.53
5589 6531 7.815840 TCTTGTGTTCTGAAAAACATATCCA 57.184 32.000 7.70 0.00 40.96 3.41
5590 6532 9.346725 GATTCTTGTGTTCTGAAAAACATATCC 57.653 33.333 7.70 0.00 40.96 2.59
5593 6535 9.950680 GAAGATTCTTGTGTTCTGAAAAACATA 57.049 29.630 3.03 0.00 40.96 2.29
5594 6536 7.922811 GGAAGATTCTTGTGTTCTGAAAAACAT 59.077 33.333 3.03 0.00 40.96 2.71
5595 6537 7.257722 GGAAGATTCTTGTGTTCTGAAAAACA 58.742 34.615 3.03 3.73 36.82 2.83
5596 6538 6.697455 GGGAAGATTCTTGTGTTCTGAAAAAC 59.303 38.462 3.03 0.00 0.00 2.43
5597 6539 6.183360 GGGGAAGATTCTTGTGTTCTGAAAAA 60.183 38.462 3.03 0.00 0.00 1.94
5598 6540 5.301805 GGGGAAGATTCTTGTGTTCTGAAAA 59.698 40.000 3.03 0.00 0.00 2.29
5599 6541 4.827284 GGGGAAGATTCTTGTGTTCTGAAA 59.173 41.667 3.03 0.00 0.00 2.69
5600 6542 4.141274 TGGGGAAGATTCTTGTGTTCTGAA 60.141 41.667 3.03 0.00 0.00 3.02
5601 6543 3.394274 TGGGGAAGATTCTTGTGTTCTGA 59.606 43.478 3.03 0.00 0.00 3.27
5602 6544 3.503748 GTGGGGAAGATTCTTGTGTTCTG 59.496 47.826 3.03 0.00 0.00 3.02
5603 6545 3.395941 AGTGGGGAAGATTCTTGTGTTCT 59.604 43.478 3.03 0.00 0.00 3.01
5604 6546 3.756117 AGTGGGGAAGATTCTTGTGTTC 58.244 45.455 3.03 0.00 0.00 3.18
5605 6547 3.884037 AGTGGGGAAGATTCTTGTGTT 57.116 42.857 3.03 0.00 0.00 3.32
5606 6548 3.884037 AAGTGGGGAAGATTCTTGTGT 57.116 42.857 3.03 0.00 0.00 3.72
5607 6549 4.911390 AGTAAGTGGGGAAGATTCTTGTG 58.089 43.478 3.03 0.00 0.00 3.33
5608 6550 5.584551 AAGTAAGTGGGGAAGATTCTTGT 57.415 39.130 3.03 0.00 0.00 3.16
5609 6551 6.901081 AAAAGTAAGTGGGGAAGATTCTTG 57.099 37.500 3.03 0.00 0.00 3.02
5662 6604 0.675208 TGGCCGTATGCATCGTTTGT 60.675 50.000 0.19 0.00 43.89 2.83
5721 6667 5.985530 GCTTGCCTTTACTTTTGTTTCAGAT 59.014 36.000 0.00 0.00 0.00 2.90
5941 6888 0.031585 GCGCTGATCCGTATGTGGTA 59.968 55.000 0.00 0.00 0.00 3.25
5991 6938 8.810652 TGGCTTTTAACAGAACAACAAATATC 57.189 30.769 0.00 0.00 0.00 1.63
6252 7203 0.948678 GGTAAAGCGCAACTGGACAA 59.051 50.000 11.47 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.