Multiple sequence alignment - TraesCS4B01G263200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G263200 chr4B 100.000 2075 0 0 793 2867 533499464 533501538 0.000000e+00 3832
1 TraesCS4B01G263200 chr4B 100.000 564 0 0 1 564 533498672 533499235 0.000000e+00 1042
2 TraesCS4B01G263200 chr4D 94.238 1857 75 15 793 2629 434274350 434276194 0.000000e+00 2808
3 TraesCS4B01G263200 chr4D 82.353 255 29 10 121 372 434273676 434273917 1.040000e-49 207
4 TraesCS4B01G263200 chr4A 94.926 1143 44 6 793 1931 35626455 35627587 0.000000e+00 1777
5 TraesCS4B01G263200 chr4A 91.483 681 40 6 1967 2629 35627584 35628264 0.000000e+00 920


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G263200 chr4B 533498672 533501538 2866 False 2437.0 3832 100.0000 1 2867 2 chr4B.!!$F1 2866
1 TraesCS4B01G263200 chr4D 434273676 434276194 2518 False 1507.5 2808 88.2955 121 2629 2 chr4D.!!$F1 2508
2 TraesCS4B01G263200 chr4A 35626455 35628264 1809 False 1348.5 1777 93.2045 793 2629 2 chr4A.!!$F1 1836

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
98 99 0.107831 AAGTCGGTGCACCTTAAGCA 59.892 50.0 32.28 7.31 40.19 3.91 F
99 100 0.324943 AGTCGGTGCACCTTAAGCAT 59.675 50.0 32.28 9.30 44.79 3.79 F
356 358 0.391927 TATGTGTGGGTAACAGCGGC 60.392 55.0 0.00 0.00 40.26 6.53 F
365 367 0.584876 GTAACAGCGGCGAAGTGTTT 59.415 50.0 21.99 10.70 35.95 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1029 1205 1.581447 GGCAGTAGCACCAAACAGC 59.419 57.895 0.00 0.0 44.61 4.40 R
1082 1258 1.649321 ATCACTGAAGGAGGAGTGCA 58.351 50.000 0.00 0.0 39.61 4.57 R
1593 1769 2.029290 ACGGTACATGAACTGTCCTGTC 60.029 50.000 0.00 0.0 39.39 3.51 R
1989 2165 2.880890 AGAAGCATGAACACTTCACACC 59.119 45.455 11.76 0.0 43.84 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.408182 GATAAGCATGGTGACTAGTGGT 57.592 45.455 0.00 0.00 0.00 4.16
22 23 5.531122 GATAAGCATGGTGACTAGTGGTA 57.469 43.478 0.00 0.00 0.00 3.25
23 24 6.102897 GATAAGCATGGTGACTAGTGGTAT 57.897 41.667 0.00 0.00 0.00 2.73
24 25 4.844349 AAGCATGGTGACTAGTGGTATT 57.156 40.909 0.00 0.00 0.00 1.89
25 26 5.950544 AAGCATGGTGACTAGTGGTATTA 57.049 39.130 0.00 0.00 0.00 0.98
26 27 6.500589 AAGCATGGTGACTAGTGGTATTAT 57.499 37.500 0.00 0.00 0.00 1.28
27 28 5.858381 AGCATGGTGACTAGTGGTATTATG 58.142 41.667 0.00 0.00 0.00 1.90
28 29 4.452455 GCATGGTGACTAGTGGTATTATGC 59.548 45.833 0.00 5.47 0.00 3.14
29 30 4.316205 TGGTGACTAGTGGTATTATGCG 57.684 45.455 0.00 0.00 0.00 4.73
30 31 3.069016 TGGTGACTAGTGGTATTATGCGG 59.931 47.826 0.00 0.00 0.00 5.69
31 32 3.069158 GGTGACTAGTGGTATTATGCGGT 59.931 47.826 0.00 0.00 0.00 5.68
32 33 4.049186 GTGACTAGTGGTATTATGCGGTG 58.951 47.826 0.00 0.00 0.00 4.94
33 34 3.702548 TGACTAGTGGTATTATGCGGTGT 59.297 43.478 0.00 0.00 0.00 4.16
34 35 4.888823 TGACTAGTGGTATTATGCGGTGTA 59.111 41.667 0.00 0.00 0.00 2.90
35 36 5.360429 TGACTAGTGGTATTATGCGGTGTAA 59.640 40.000 0.00 0.00 0.00 2.41
36 37 6.127394 TGACTAGTGGTATTATGCGGTGTAAA 60.127 38.462 0.00 0.00 0.00 2.01
37 38 6.642430 ACTAGTGGTATTATGCGGTGTAAAA 58.358 36.000 0.00 0.00 0.00 1.52
38 39 7.277396 ACTAGTGGTATTATGCGGTGTAAAAT 58.723 34.615 0.00 0.00 0.00 1.82
39 40 7.771826 ACTAGTGGTATTATGCGGTGTAAAATT 59.228 33.333 0.00 0.00 0.00 1.82
40 41 7.023197 AGTGGTATTATGCGGTGTAAAATTC 57.977 36.000 0.00 0.00 0.00 2.17
41 42 6.826741 AGTGGTATTATGCGGTGTAAAATTCT 59.173 34.615 0.00 0.00 0.00 2.40
42 43 7.338449 AGTGGTATTATGCGGTGTAAAATTCTT 59.662 33.333 0.00 0.00 0.00 2.52
43 44 7.642586 GTGGTATTATGCGGTGTAAAATTCTTC 59.357 37.037 0.00 0.00 0.00 2.87
44 45 7.337184 TGGTATTATGCGGTGTAAAATTCTTCA 59.663 33.333 0.00 0.00 0.00 3.02
45 46 7.642586 GGTATTATGCGGTGTAAAATTCTTCAC 59.357 37.037 0.00 0.00 0.00 3.18
46 47 3.529634 TGCGGTGTAAAATTCTTCACG 57.470 42.857 0.00 0.00 0.00 4.35
47 48 2.224549 TGCGGTGTAAAATTCTTCACGG 59.775 45.455 0.00 0.00 35.36 4.94
48 49 2.413634 GCGGTGTAAAATTCTTCACGGG 60.414 50.000 12.46 0.00 33.75 5.28
49 50 2.809696 CGGTGTAAAATTCTTCACGGGT 59.190 45.455 0.00 0.00 0.00 5.28
50 51 3.251487 CGGTGTAAAATTCTTCACGGGTT 59.749 43.478 0.00 0.00 0.00 4.11
51 52 4.612033 CGGTGTAAAATTCTTCACGGGTTC 60.612 45.833 0.00 0.00 0.00 3.62
52 53 4.517832 GGTGTAAAATTCTTCACGGGTTCT 59.482 41.667 0.00 0.00 0.00 3.01
53 54 5.009310 GGTGTAAAATTCTTCACGGGTTCTT 59.991 40.000 0.00 0.00 0.00 2.52
54 55 5.912955 GTGTAAAATTCTTCACGGGTTCTTG 59.087 40.000 0.00 0.00 0.00 3.02
55 56 4.584327 AAAATTCTTCACGGGTTCTTGG 57.416 40.909 0.00 0.00 0.00 3.61
56 57 2.951229 ATTCTTCACGGGTTCTTGGT 57.049 45.000 0.00 0.00 0.00 3.67
57 58 2.721425 TTCTTCACGGGTTCTTGGTT 57.279 45.000 0.00 0.00 0.00 3.67
58 59 3.842007 TTCTTCACGGGTTCTTGGTTA 57.158 42.857 0.00 0.00 0.00 2.85
59 60 3.396260 TCTTCACGGGTTCTTGGTTAG 57.604 47.619 0.00 0.00 0.00 2.34
60 61 2.967201 TCTTCACGGGTTCTTGGTTAGA 59.033 45.455 0.00 0.00 0.00 2.10
61 62 3.388676 TCTTCACGGGTTCTTGGTTAGAA 59.611 43.478 0.00 0.00 40.57 2.10
62 63 3.842007 TCACGGGTTCTTGGTTAGAAA 57.158 42.857 0.00 0.00 44.25 2.52
63 64 4.153673 TCACGGGTTCTTGGTTAGAAAA 57.846 40.909 0.00 0.00 44.25 2.29
64 65 4.525024 TCACGGGTTCTTGGTTAGAAAAA 58.475 39.130 0.00 0.00 44.25 1.94
65 66 5.134661 TCACGGGTTCTTGGTTAGAAAAAT 58.865 37.500 0.00 0.00 44.25 1.82
66 67 5.009210 TCACGGGTTCTTGGTTAGAAAAATG 59.991 40.000 0.00 0.00 44.25 2.32
67 68 4.279922 ACGGGTTCTTGGTTAGAAAAATGG 59.720 41.667 0.00 0.00 44.25 3.16
68 69 4.279922 CGGGTTCTTGGTTAGAAAAATGGT 59.720 41.667 0.00 0.00 44.25 3.55
69 70 5.538118 GGGTTCTTGGTTAGAAAAATGGTG 58.462 41.667 0.00 0.00 44.25 4.17
70 71 5.303333 GGGTTCTTGGTTAGAAAAATGGTGA 59.697 40.000 0.00 0.00 44.25 4.02
71 72 6.213677 GGTTCTTGGTTAGAAAAATGGTGAC 58.786 40.000 0.00 0.00 44.25 3.67
72 73 6.040504 GGTTCTTGGTTAGAAAAATGGTGACT 59.959 38.462 0.00 0.00 44.25 3.41
73 74 6.633500 TCTTGGTTAGAAAAATGGTGACTG 57.367 37.500 0.00 0.00 0.00 3.51
74 75 4.846779 TGGTTAGAAAAATGGTGACTGC 57.153 40.909 0.00 0.00 0.00 4.40
75 76 4.211125 TGGTTAGAAAAATGGTGACTGCA 58.789 39.130 0.00 0.00 0.00 4.41
76 77 4.832266 TGGTTAGAAAAATGGTGACTGCAT 59.168 37.500 0.00 0.00 0.00 3.96
77 78 5.304101 TGGTTAGAAAAATGGTGACTGCATT 59.696 36.000 0.00 0.00 0.00 3.56
78 79 6.183360 TGGTTAGAAAAATGGTGACTGCATTT 60.183 34.615 0.00 0.00 0.00 2.32
79 80 7.014711 TGGTTAGAAAAATGGTGACTGCATTTA 59.985 33.333 0.00 0.00 0.00 1.40
80 81 7.870445 GGTTAGAAAAATGGTGACTGCATTTAA 59.130 33.333 0.00 0.00 0.00 1.52
81 82 8.915654 GTTAGAAAAATGGTGACTGCATTTAAG 58.084 33.333 0.00 0.00 0.00 1.85
82 83 7.054491 AGAAAAATGGTGACTGCATTTAAGT 57.946 32.000 0.00 0.00 0.00 2.24
83 84 7.147976 AGAAAAATGGTGACTGCATTTAAGTC 58.852 34.615 0.00 0.00 43.62 3.01
84 85 4.685169 AATGGTGACTGCATTTAAGTCG 57.315 40.909 0.00 0.00 45.81 4.18
85 86 2.422597 TGGTGACTGCATTTAAGTCGG 58.577 47.619 0.00 0.00 45.81 4.79
86 87 2.224426 TGGTGACTGCATTTAAGTCGGT 60.224 45.455 0.00 0.00 45.81 4.69
87 88 2.159627 GGTGACTGCATTTAAGTCGGTG 59.840 50.000 0.00 0.00 45.81 4.94
88 89 1.804151 TGACTGCATTTAAGTCGGTGC 59.196 47.619 0.00 0.00 45.81 5.01
89 90 1.804151 GACTGCATTTAAGTCGGTGCA 59.196 47.619 0.00 0.00 44.50 4.57
90 91 1.535462 ACTGCATTTAAGTCGGTGCAC 59.465 47.619 8.80 8.80 42.13 4.57
91 92 0.878416 TGCATTTAAGTCGGTGCACC 59.122 50.000 26.78 26.78 42.13 5.01
92 93 1.165270 GCATTTAAGTCGGTGCACCT 58.835 50.000 32.28 17.06 37.52 4.00
93 94 1.539827 GCATTTAAGTCGGTGCACCTT 59.460 47.619 32.28 22.13 37.52 3.50
94 95 2.745281 GCATTTAAGTCGGTGCACCTTA 59.255 45.455 32.28 21.09 37.52 2.69
95 96 3.189702 GCATTTAAGTCGGTGCACCTTAA 59.810 43.478 32.28 25.10 37.52 1.85
96 97 4.671766 GCATTTAAGTCGGTGCACCTTAAG 60.672 45.833 32.28 17.60 37.52 1.85
97 98 2.088950 TAAGTCGGTGCACCTTAAGC 57.911 50.000 32.28 17.04 0.00 3.09
98 99 0.107831 AAGTCGGTGCACCTTAAGCA 59.892 50.000 32.28 7.31 40.19 3.91
99 100 0.324943 AGTCGGTGCACCTTAAGCAT 59.675 50.000 32.28 9.30 44.79 3.79
100 101 1.165270 GTCGGTGCACCTTAAGCATT 58.835 50.000 32.28 0.00 44.79 3.56
101 102 1.539827 GTCGGTGCACCTTAAGCATTT 59.460 47.619 32.28 0.00 44.79 2.32
102 103 1.539388 TCGGTGCACCTTAAGCATTTG 59.461 47.619 32.28 13.53 44.79 2.32
103 104 1.539388 CGGTGCACCTTAAGCATTTGA 59.461 47.619 32.28 0.00 44.79 2.69
104 105 2.668279 CGGTGCACCTTAAGCATTTGAC 60.668 50.000 32.28 2.08 44.79 3.18
105 106 2.558359 GGTGCACCTTAAGCATTTGACT 59.442 45.455 29.12 0.00 44.79 3.41
106 107 3.005791 GGTGCACCTTAAGCATTTGACTT 59.994 43.478 29.12 0.00 44.79 3.01
107 108 3.983344 GTGCACCTTAAGCATTTGACTTG 59.017 43.478 5.22 0.00 44.79 3.16
108 109 3.636300 TGCACCTTAAGCATTTGACTTGT 59.364 39.130 0.00 0.00 37.02 3.16
109 110 4.824537 TGCACCTTAAGCATTTGACTTGTA 59.175 37.500 0.00 0.00 37.02 2.41
110 111 5.300539 TGCACCTTAAGCATTTGACTTGTAA 59.699 36.000 0.00 0.00 37.02 2.41
111 112 6.183360 TGCACCTTAAGCATTTGACTTGTAAA 60.183 34.615 0.00 0.00 37.02 2.01
112 113 6.868339 GCACCTTAAGCATTTGACTTGTAAAT 59.132 34.615 0.00 0.00 0.00 1.40
113 114 7.384932 GCACCTTAAGCATTTGACTTGTAAATT 59.615 33.333 0.00 0.00 0.00 1.82
114 115 8.702438 CACCTTAAGCATTTGACTTGTAAATTG 58.298 33.333 0.00 0.00 0.00 2.32
115 116 8.421002 ACCTTAAGCATTTGACTTGTAAATTGT 58.579 29.630 0.00 0.00 0.00 2.71
116 117 9.906660 CCTTAAGCATTTGACTTGTAAATTGTA 57.093 29.630 0.00 0.00 0.00 2.41
156 157 2.955660 GAGTGTGTTTTGGATGTGGGAA 59.044 45.455 0.00 0.00 0.00 3.97
178 179 4.882842 TGCTGTGTCACCTTAGATAACA 57.117 40.909 0.00 0.00 0.00 2.41
190 191 8.696374 TCACCTTAGATAACATGAAGTCCTTAG 58.304 37.037 0.00 0.00 0.00 2.18
196 197 8.779354 AGATAACATGAAGTCCTTAGTGTTTC 57.221 34.615 0.00 10.17 34.38 2.78
197 198 8.375506 AGATAACATGAAGTCCTTAGTGTTTCA 58.624 33.333 0.00 0.00 34.38 2.69
202 203 6.677781 TGAAGTCCTTAGTGTTTCACTTTG 57.322 37.500 7.70 2.25 42.59 2.77
204 205 3.883489 AGTCCTTAGTGTTTCACTTTGGC 59.117 43.478 7.70 7.18 42.59 4.52
210 211 6.183360 CCTTAGTGTTTCACTTTGGCTGTTAA 60.183 38.462 7.70 0.00 42.59 2.01
223 224 3.202906 GGCTGTTAATGAGTTATGCCGA 58.797 45.455 0.00 0.00 0.00 5.54
229 230 6.636705 TGTTAATGAGTTATGCCGAGTTACT 58.363 36.000 0.00 0.00 0.00 2.24
230 231 7.774134 TGTTAATGAGTTATGCCGAGTTACTA 58.226 34.615 0.00 0.00 0.00 1.82
231 232 7.703621 TGTTAATGAGTTATGCCGAGTTACTAC 59.296 37.037 0.00 0.00 0.00 2.73
244 245 4.278669 CGAGTTACTACCACTAGCCATCAT 59.721 45.833 0.00 0.00 0.00 2.45
246 247 4.962995 AGTTACTACCACTAGCCATCATGT 59.037 41.667 0.00 0.00 0.00 3.21
248 249 4.142609 ACTACCACTAGCCATCATGTTG 57.857 45.455 0.00 0.00 0.00 3.33
252 253 2.941064 CCACTAGCCATCATGTTGTCTG 59.059 50.000 3.19 0.00 0.00 3.51
261 262 2.771089 TCATGTTGTCTGAGAGGTTGC 58.229 47.619 0.00 0.00 0.00 4.17
265 266 2.158769 TGTTGTCTGAGAGGTTGCACAT 60.159 45.455 0.00 0.00 0.00 3.21
271 272 4.937620 GTCTGAGAGGTTGCACATGAAATA 59.062 41.667 0.00 0.00 0.00 1.40
272 273 5.587844 GTCTGAGAGGTTGCACATGAAATAT 59.412 40.000 0.00 0.00 0.00 1.28
273 274 6.094603 GTCTGAGAGGTTGCACATGAAATATT 59.905 38.462 0.00 0.00 0.00 1.28
274 275 6.094464 TCTGAGAGGTTGCACATGAAATATTG 59.906 38.462 0.00 0.00 0.00 1.90
275 276 5.945191 TGAGAGGTTGCACATGAAATATTGA 59.055 36.000 0.00 0.00 0.00 2.57
276 277 6.433716 TGAGAGGTTGCACATGAAATATTGAA 59.566 34.615 0.00 0.00 0.00 2.69
277 278 7.039853 TGAGAGGTTGCACATGAAATATTGAAA 60.040 33.333 0.00 0.00 0.00 2.69
278 279 7.844009 AGAGGTTGCACATGAAATATTGAAAT 58.156 30.769 0.00 0.00 0.00 2.17
281 282 7.332430 AGGTTGCACATGAAATATTGAAATGTG 59.668 33.333 22.26 22.26 46.92 3.21
304 305 8.729756 TGTGGTGATATACATTTTGAAGTCTTG 58.270 33.333 0.00 0.00 0.00 3.02
319 320 3.365472 AGTCTTGCCTTTTCAACCAAGT 58.635 40.909 0.00 0.00 36.82 3.16
322 323 3.960102 TCTTGCCTTTTCAACCAAGTGAT 59.040 39.130 0.00 0.00 36.82 3.06
327 328 4.262164 GCCTTTTCAACCAAGTGATGATGT 60.262 41.667 0.00 0.00 0.00 3.06
328 329 5.464168 CCTTTTCAACCAAGTGATGATGTC 58.536 41.667 0.00 0.00 0.00 3.06
329 330 5.009911 CCTTTTCAACCAAGTGATGATGTCA 59.990 40.000 0.00 0.00 0.00 3.58
330 331 6.294899 CCTTTTCAACCAAGTGATGATGTCAT 60.295 38.462 0.00 0.00 39.48 3.06
346 348 3.684908 TGTCATCCAAGTTATGTGTGGG 58.315 45.455 0.00 0.00 32.95 4.61
353 355 3.190535 CCAAGTTATGTGTGGGTAACAGC 59.809 47.826 0.00 0.00 40.26 4.40
355 357 1.735571 GTTATGTGTGGGTAACAGCGG 59.264 52.381 0.00 0.00 40.26 5.52
356 358 0.391927 TATGTGTGGGTAACAGCGGC 60.392 55.000 0.00 0.00 40.26 6.53
362 364 2.388232 GGGTAACAGCGGCGAAGTG 61.388 63.158 12.98 6.97 39.74 3.16
365 367 0.584876 GTAACAGCGGCGAAGTGTTT 59.415 50.000 21.99 10.70 35.95 2.83
368 370 0.884704 ACAGCGGCGAAGTGTTTCAT 60.885 50.000 12.98 0.00 32.67 2.57
380 508 2.765699 AGTGTTTCATGTTGTGCCCTTT 59.234 40.909 0.00 0.00 0.00 3.11
391 519 4.532916 TGTTGTGCCCTTTACCTGTCTATA 59.467 41.667 0.00 0.00 0.00 1.31
392 520 5.190925 TGTTGTGCCCTTTACCTGTCTATAT 59.809 40.000 0.00 0.00 0.00 0.86
425 553 4.219115 TGAACACTTTCTCCTCTCACTCT 58.781 43.478 0.00 0.00 32.36 3.24
429 557 5.141182 ACACTTTCTCCTCTCACTCTTGTA 58.859 41.667 0.00 0.00 0.00 2.41
443 572 4.623167 CACTCTTGTAGTTTCTCCATGTCG 59.377 45.833 0.00 0.00 35.76 4.35
446 575 4.279922 TCTTGTAGTTTCTCCATGTCGACA 59.720 41.667 22.48 22.48 0.00 4.35
447 576 4.801330 TGTAGTTTCTCCATGTCGACAT 57.199 40.909 25.18 25.18 36.96 3.06
454 583 5.914898 TTCTCCATGTCGACATTCTTCTA 57.085 39.130 28.04 9.72 33.61 2.10
459 588 7.492669 TCTCCATGTCGACATTCTTCTAAATTC 59.507 37.037 28.04 0.00 33.61 2.17
461 590 7.824289 TCCATGTCGACATTCTTCTAAATTCTT 59.176 33.333 28.04 0.00 33.61 2.52
462 591 8.119226 CCATGTCGACATTCTTCTAAATTCTTC 58.881 37.037 28.04 0.00 33.61 2.87
463 592 8.877779 CATGTCGACATTCTTCTAAATTCTTCT 58.122 33.333 28.04 0.00 33.61 2.85
464 593 8.467402 TGTCGACATTCTTCTAAATTCTTCTC 57.533 34.615 15.76 0.00 0.00 2.87
465 594 8.307483 TGTCGACATTCTTCTAAATTCTTCTCT 58.693 33.333 15.76 0.00 0.00 3.10
487 659 9.988815 TCTCTAATCTTCTGTTCTATATTTGCC 57.011 33.333 0.00 0.00 0.00 4.52
490 662 7.814264 AATCTTCTGTTCTATATTTGCCCAG 57.186 36.000 0.00 0.00 0.00 4.45
499 671 7.947332 TGTTCTATATTTGCCCAGCCATTATTA 59.053 33.333 0.00 0.00 0.00 0.98
500 672 8.971073 GTTCTATATTTGCCCAGCCATTATTAT 58.029 33.333 0.00 0.00 0.00 1.28
507 679 5.024785 TGCCCAGCCATTATTATTGCATAT 58.975 37.500 0.00 0.00 0.00 1.78
508 680 6.193504 TGCCCAGCCATTATTATTGCATATA 58.806 36.000 0.00 0.00 0.00 0.86
509 681 6.666980 TGCCCAGCCATTATTATTGCATATAA 59.333 34.615 0.00 0.00 0.00 0.98
510 682 7.345132 TGCCCAGCCATTATTATTGCATATAAT 59.655 33.333 14.42 14.42 0.00 1.28
511 683 8.859090 GCCCAGCCATTATTATTGCATATAATA 58.141 33.333 13.06 13.06 0.00 0.98
555 727 8.535335 ACGATATATCAGCATTATCCTTTCTGT 58.465 33.333 13.11 0.00 0.00 3.41
557 729 9.881649 GATATATCAGCATTATCCTTTCTGTGA 57.118 33.333 7.89 0.00 0.00 3.58
822 994 8.103935 CCTTTTAGGAATAATCTAGGGATGGTC 58.896 40.741 0.00 0.00 37.67 4.02
827 999 4.810191 ATAATCTAGGGATGGTCGCTTC 57.190 45.455 1.79 0.00 40.36 3.86
882 1054 9.587772 TCTAACTGCTGACTTCTAATATTGTTC 57.412 33.333 0.00 0.00 0.00 3.18
891 1063 7.117236 TGACTTCTAATATTGTTCGTGTTGGTC 59.883 37.037 0.00 0.00 0.00 4.02
988 1164 3.442273 TCCTTTCTTGCTTCACGTTTGTT 59.558 39.130 0.00 0.00 0.00 2.83
990 1166 5.298276 TCCTTTCTTGCTTCACGTTTGTTAT 59.702 36.000 0.00 0.00 0.00 1.89
993 1169 6.804534 TTCTTGCTTCACGTTTGTTATTTG 57.195 33.333 0.00 0.00 0.00 2.32
1011 1187 4.418013 TTTGTTAAGCATGTCCATCGTG 57.582 40.909 0.00 0.00 36.25 4.35
1029 1205 0.664224 TGCATGTCTGTGTGCAGTTG 59.336 50.000 0.00 0.00 45.60 3.16
1063 1239 1.266989 CTGCCGGGAAAGAAACTGTTC 59.733 52.381 2.18 0.00 0.00 3.18
1107 1283 3.913163 ACTCCTCCTTCAGTGATTCCTTT 59.087 43.478 0.00 0.00 0.00 3.11
1108 1284 4.260170 CTCCTCCTTCAGTGATTCCTTTG 58.740 47.826 0.00 0.00 0.00 2.77
1289 1465 8.864069 ACATCAGAGAAGATTAGTGTATTTCG 57.136 34.615 0.00 0.00 0.00 3.46
1321 1497 3.831323 TCTGGCAATGGAGAAAGTGAAA 58.169 40.909 0.00 0.00 0.00 2.69
1347 1523 7.980099 AGTACATTTCAGTATGGCAACTACTAC 59.020 37.037 0.67 0.00 36.16 2.73
1370 1546 5.359009 ACAAAGAGGTGGATGATTTGCATAG 59.641 40.000 0.00 0.00 37.34 2.23
1483 1659 7.094334 GGTCCATGTATCAAGATGTATCTCGTA 60.094 40.741 0.00 0.00 35.76 3.43
1593 1769 1.511850 TCATTGACGTGGCACAGAAG 58.488 50.000 19.09 3.40 41.80 2.85
1638 1814 6.431234 GTGTAACCAAAGAAAGTCTGATGGAT 59.569 38.462 14.17 7.48 36.78 3.41
1716 1892 2.483013 CCTGACAGTTCACGGTTCTGAA 60.483 50.000 0.93 0.00 33.93 3.02
1820 1996 9.203163 AGCTGATCATAGATATTCATCTCATCA 57.797 33.333 0.00 0.00 40.81 3.07
1867 2043 6.647334 TGAAATTTGTTACATCTGGCTGAA 57.353 33.333 0.00 0.00 0.00 3.02
1872 2048 6.899393 TTTGTTACATCTGGCTGAAAGAAT 57.101 33.333 0.00 0.00 34.07 2.40
1919 2095 2.898612 TGATGCATGTTTGACCCAATGT 59.101 40.909 2.46 0.00 0.00 2.71
1953 2129 3.860378 GCGTTGCCATCAATTTCTTTCCA 60.860 43.478 0.00 0.00 34.29 3.53
1959 2135 5.221682 TGCCATCAATTTCTTTCCAACATGT 60.222 36.000 0.00 0.00 0.00 3.21
1974 2150 6.987386 TCCAACATGTTACAAAATTACCCTG 58.013 36.000 11.53 0.00 0.00 4.45
1989 2165 9.981114 AAAATTACCCTGTCAAATTTAGTTGAG 57.019 29.630 0.00 0.00 38.17 3.02
2054 2230 5.824624 CCATCATACCTTAGTCAACTGCATT 59.175 40.000 0.00 0.00 0.00 3.56
2056 2232 7.498900 CCATCATACCTTAGTCAACTGCATTTA 59.501 37.037 0.00 0.00 0.00 1.40
2057 2233 8.892723 CATCATACCTTAGTCAACTGCATTTAA 58.107 33.333 0.00 0.00 0.00 1.52
2058 2234 8.856153 TCATACCTTAGTCAACTGCATTTAAA 57.144 30.769 0.00 0.00 0.00 1.52
2068 2258 8.196771 AGTCAACTGCATTTAAAGTTTCATTGA 58.803 29.630 0.00 0.00 34.41 2.57
2074 2265 7.715657 TGCATTTAAAGTTTCATTGAGTCACT 58.284 30.769 0.00 0.00 0.00 3.41
2124 2316 8.506168 AACTAACACCATTGGTATCACTATTG 57.494 34.615 8.31 0.00 32.11 1.90
2126 2318 8.107095 ACTAACACCATTGGTATCACTATTGTT 58.893 33.333 8.31 7.76 32.11 2.83
2267 2459 2.266055 GGTCCTGTTCCTCTGCCG 59.734 66.667 0.00 0.00 0.00 5.69
2306 2498 0.603975 GTGTGCTCAACTCTCCCCAC 60.604 60.000 0.00 0.00 0.00 4.61
2390 2582 4.143333 CCGACCGCCCAGACGATT 62.143 66.667 0.00 0.00 34.06 3.34
2618 2812 2.344741 GCAGTTAAAGAAGTACCGAGCG 59.655 50.000 0.00 0.00 0.00 5.03
2629 2823 2.494870 AGTACCGAGCGAGGTTATTTGT 59.505 45.455 11.26 0.00 43.00 2.83
2630 2824 2.467566 ACCGAGCGAGGTTATTTGTT 57.532 45.000 0.07 0.00 43.00 2.83
2631 2825 2.774687 ACCGAGCGAGGTTATTTGTTT 58.225 42.857 0.07 0.00 43.00 2.83
2632 2826 2.740447 ACCGAGCGAGGTTATTTGTTTC 59.260 45.455 0.07 0.00 43.00 2.78
2633 2827 2.095372 CCGAGCGAGGTTATTTGTTTCC 59.905 50.000 0.00 0.00 0.00 3.13
2634 2828 3.000727 CGAGCGAGGTTATTTGTTTCCT 58.999 45.455 0.00 0.00 0.00 3.36
2635 2829 3.181520 CGAGCGAGGTTATTTGTTTCCTG 60.182 47.826 0.00 0.00 0.00 3.86
2636 2830 3.751518 AGCGAGGTTATTTGTTTCCTGT 58.248 40.909 0.00 0.00 0.00 4.00
2637 2831 3.751698 AGCGAGGTTATTTGTTTCCTGTC 59.248 43.478 0.00 0.00 0.00 3.51
2638 2832 3.119955 GCGAGGTTATTTGTTTCCTGTCC 60.120 47.826 0.00 0.00 0.00 4.02
2639 2833 3.439129 CGAGGTTATTTGTTTCCTGTCCC 59.561 47.826 0.00 0.00 0.00 4.46
2640 2834 4.403734 GAGGTTATTTGTTTCCTGTCCCA 58.596 43.478 0.00 0.00 0.00 4.37
2641 2835 4.407365 AGGTTATTTGTTTCCTGTCCCAG 58.593 43.478 0.00 0.00 0.00 4.45
2642 2836 4.105697 AGGTTATTTGTTTCCTGTCCCAGA 59.894 41.667 0.00 0.00 32.44 3.86
2643 2837 4.830600 GGTTATTTGTTTCCTGTCCCAGAA 59.169 41.667 0.00 0.00 32.44 3.02
2644 2838 5.278808 GGTTATTTGTTTCCTGTCCCAGAAC 60.279 44.000 0.00 0.00 32.44 3.01
2645 2839 3.662759 TTTGTTTCCTGTCCCAGAACT 57.337 42.857 0.00 0.00 32.44 3.01
2646 2840 2.638480 TGTTTCCTGTCCCAGAACTG 57.362 50.000 0.00 0.00 32.44 3.16
2647 2841 2.123589 TGTTTCCTGTCCCAGAACTGA 58.876 47.619 3.19 0.00 32.44 3.41
2648 2842 2.711009 TGTTTCCTGTCCCAGAACTGAT 59.289 45.455 3.19 0.00 32.44 2.90
2649 2843 3.138283 TGTTTCCTGTCCCAGAACTGATT 59.862 43.478 3.19 0.00 32.44 2.57
2650 2844 3.703001 TTCCTGTCCCAGAACTGATTC 57.297 47.619 3.19 0.00 32.44 2.52
2651 2845 2.619931 TCCTGTCCCAGAACTGATTCA 58.380 47.619 3.19 0.00 37.29 2.57
2652 2846 3.184628 TCCTGTCCCAGAACTGATTCAT 58.815 45.455 3.19 0.00 37.29 2.57
2653 2847 3.198635 TCCTGTCCCAGAACTGATTCATC 59.801 47.826 3.19 0.00 37.29 2.92
2654 2848 3.199508 CCTGTCCCAGAACTGATTCATCT 59.800 47.826 3.19 0.00 37.29 2.90
2655 2849 4.406972 CCTGTCCCAGAACTGATTCATCTA 59.593 45.833 3.19 0.00 37.29 1.98
2656 2850 5.453057 CCTGTCCCAGAACTGATTCATCTAG 60.453 48.000 3.19 0.00 37.29 2.43
2657 2851 5.272402 TGTCCCAGAACTGATTCATCTAGA 58.728 41.667 0.00 0.00 37.29 2.43
2658 2852 5.721480 TGTCCCAGAACTGATTCATCTAGAA 59.279 40.000 0.00 0.00 41.28 2.10
2659 2853 6.213397 TGTCCCAGAACTGATTCATCTAGAAA 59.787 38.462 0.00 0.00 40.22 2.52
2660 2854 7.092712 TGTCCCAGAACTGATTCATCTAGAAAT 60.093 37.037 0.00 0.00 40.22 2.17
2661 2855 7.772757 GTCCCAGAACTGATTCATCTAGAAATT 59.227 37.037 0.00 0.00 40.22 1.82
2662 2856 7.772292 TCCCAGAACTGATTCATCTAGAAATTG 59.228 37.037 0.00 0.00 40.22 2.32
2663 2857 7.416022 CCAGAACTGATTCATCTAGAAATTGC 58.584 38.462 0.00 0.00 40.22 3.56
2664 2858 7.282675 CCAGAACTGATTCATCTAGAAATTGCT 59.717 37.037 0.00 0.00 40.22 3.91
2665 2859 8.336806 CAGAACTGATTCATCTAGAAATTGCTC 58.663 37.037 0.00 0.00 40.22 4.26
2666 2860 7.498570 AGAACTGATTCATCTAGAAATTGCTCC 59.501 37.037 0.00 0.00 40.22 4.70
2667 2861 6.656902 ACTGATTCATCTAGAAATTGCTCCA 58.343 36.000 0.00 0.00 40.22 3.86
2668 2862 7.288560 ACTGATTCATCTAGAAATTGCTCCAT 58.711 34.615 0.00 0.00 40.22 3.41
2669 2863 7.778853 ACTGATTCATCTAGAAATTGCTCCATT 59.221 33.333 0.00 0.00 40.22 3.16
2670 2864 8.162878 TGATTCATCTAGAAATTGCTCCATTC 57.837 34.615 0.00 0.00 40.22 2.67
2671 2865 7.776500 TGATTCATCTAGAAATTGCTCCATTCA 59.224 33.333 0.00 0.00 40.22 2.57
2672 2866 8.707796 ATTCATCTAGAAATTGCTCCATTCAT 57.292 30.769 0.00 0.00 40.22 2.57
2673 2867 9.803507 ATTCATCTAGAAATTGCTCCATTCATA 57.196 29.630 0.00 0.00 40.22 2.15
2674 2868 8.613060 TCATCTAGAAATTGCTCCATTCATAC 57.387 34.615 0.00 0.00 0.00 2.39
2675 2869 8.435187 TCATCTAGAAATTGCTCCATTCATACT 58.565 33.333 0.00 0.00 0.00 2.12
2676 2870 9.716531 CATCTAGAAATTGCTCCATTCATACTA 57.283 33.333 0.00 0.00 0.00 1.82
2677 2871 9.941325 ATCTAGAAATTGCTCCATTCATACTAG 57.059 33.333 0.00 0.00 0.00 2.57
2678 2872 8.928448 TCTAGAAATTGCTCCATTCATACTAGT 58.072 33.333 0.00 0.00 0.00 2.57
2679 2873 9.553064 CTAGAAATTGCTCCATTCATACTAGTT 57.447 33.333 0.00 0.00 0.00 2.24
2680 2874 8.218338 AGAAATTGCTCCATTCATACTAGTTG 57.782 34.615 0.00 0.00 0.00 3.16
2681 2875 6.382869 AATTGCTCCATTCATACTAGTTGC 57.617 37.500 0.00 0.00 0.00 4.17
2682 2876 4.486125 TGCTCCATTCATACTAGTTGCA 57.514 40.909 0.00 0.00 0.00 4.08
2683 2877 4.191544 TGCTCCATTCATACTAGTTGCAC 58.808 43.478 0.00 0.00 0.00 4.57
2684 2878 4.191544 GCTCCATTCATACTAGTTGCACA 58.808 43.478 0.00 0.00 0.00 4.57
2685 2879 4.272018 GCTCCATTCATACTAGTTGCACAG 59.728 45.833 0.00 0.00 0.00 3.66
2686 2880 5.664457 CTCCATTCATACTAGTTGCACAGA 58.336 41.667 0.00 0.00 0.00 3.41
2687 2881 6.239217 TCCATTCATACTAGTTGCACAGAT 57.761 37.500 0.00 0.00 0.00 2.90
2688 2882 6.653020 TCCATTCATACTAGTTGCACAGATT 58.347 36.000 0.00 0.00 0.00 2.40
2689 2883 7.112122 TCCATTCATACTAGTTGCACAGATTT 58.888 34.615 0.00 0.00 0.00 2.17
2690 2884 7.611467 TCCATTCATACTAGTTGCACAGATTTT 59.389 33.333 0.00 0.00 0.00 1.82
2691 2885 7.699391 CCATTCATACTAGTTGCACAGATTTTG 59.301 37.037 0.00 0.00 0.00 2.44
2692 2886 7.744087 TTCATACTAGTTGCACAGATTTTGT 57.256 32.000 0.00 0.00 41.94 2.83
2702 2896 3.207474 ACAGATTTTGTGCGCTGATTC 57.793 42.857 9.73 0.00 38.99 2.52
2703 2897 2.553602 ACAGATTTTGTGCGCTGATTCA 59.446 40.909 9.73 0.00 38.99 2.57
2704 2898 3.004629 ACAGATTTTGTGCGCTGATTCAA 59.995 39.130 9.73 3.80 38.99 2.69
2705 2899 3.362831 CAGATTTTGTGCGCTGATTCAAC 59.637 43.478 9.73 0.00 0.00 3.18
2706 2900 2.859526 TTTTGTGCGCTGATTCAACA 57.140 40.000 9.73 0.00 0.00 3.33
2707 2901 3.367992 TTTTGTGCGCTGATTCAACAT 57.632 38.095 9.73 0.00 0.00 2.71
2708 2902 4.495911 TTTTGTGCGCTGATTCAACATA 57.504 36.364 9.73 0.00 0.00 2.29
2709 2903 4.700268 TTTGTGCGCTGATTCAACATAT 57.300 36.364 9.73 0.00 0.00 1.78
2710 2904 4.700268 TTGTGCGCTGATTCAACATATT 57.300 36.364 9.73 0.00 0.00 1.28
2711 2905 4.018649 TGTGCGCTGATTCAACATATTG 57.981 40.909 9.73 0.00 37.14 1.90
2712 2906 3.181498 TGTGCGCTGATTCAACATATTGG 60.181 43.478 9.73 0.00 36.39 3.16
2713 2907 2.223548 TGCGCTGATTCAACATATTGGC 60.224 45.455 9.73 0.00 36.39 4.52
2714 2908 2.223548 GCGCTGATTCAACATATTGGCA 60.224 45.455 0.00 0.00 36.39 4.92
2715 2909 3.734597 GCGCTGATTCAACATATTGGCAA 60.735 43.478 0.68 0.68 36.39 4.52
2716 2910 4.422840 CGCTGATTCAACATATTGGCAAA 58.577 39.130 3.01 0.00 36.39 3.68
2717 2911 4.501559 CGCTGATTCAACATATTGGCAAAG 59.498 41.667 3.01 0.00 36.39 2.77
2718 2912 4.269363 GCTGATTCAACATATTGGCAAAGC 59.731 41.667 3.01 0.00 36.39 3.51
2719 2913 5.657474 CTGATTCAACATATTGGCAAAGCT 58.343 37.500 3.01 0.00 36.39 3.74
2720 2914 6.040209 TGATTCAACATATTGGCAAAGCTT 57.960 33.333 3.01 0.00 36.39 3.74
2721 2915 6.465948 TGATTCAACATATTGGCAAAGCTTT 58.534 32.000 5.69 5.69 36.39 3.51
2722 2916 6.591062 TGATTCAACATATTGGCAAAGCTTTC 59.409 34.615 9.23 4.47 36.39 2.62
2723 2917 5.726980 TCAACATATTGGCAAAGCTTTCT 57.273 34.783 9.23 0.00 36.39 2.52
2724 2918 6.100404 TCAACATATTGGCAAAGCTTTCTT 57.900 33.333 9.23 0.00 36.39 2.52
2725 2919 7.225784 TCAACATATTGGCAAAGCTTTCTTA 57.774 32.000 9.23 0.00 36.39 2.10
2726 2920 7.839907 TCAACATATTGGCAAAGCTTTCTTAT 58.160 30.769 9.23 3.56 36.39 1.73
2727 2921 8.313292 TCAACATATTGGCAAAGCTTTCTTATT 58.687 29.630 9.23 0.00 36.39 1.40
2728 2922 8.938906 CAACATATTGGCAAAGCTTTCTTATTT 58.061 29.630 9.23 0.00 31.63 1.40
2729 2923 8.707938 ACATATTGGCAAAGCTTTCTTATTTC 57.292 30.769 9.23 0.00 31.02 2.17
2730 2924 8.534496 ACATATTGGCAAAGCTTTCTTATTTCT 58.466 29.630 9.23 0.00 31.02 2.52
2731 2925 9.028185 CATATTGGCAAAGCTTTCTTATTTCTC 57.972 33.333 9.23 0.00 31.02 2.87
2732 2926 5.391312 TGGCAAAGCTTTCTTATTTCTCC 57.609 39.130 9.23 0.71 31.02 3.71
2733 2927 5.079643 TGGCAAAGCTTTCTTATTTCTCCT 58.920 37.500 9.23 0.00 31.02 3.69
2734 2928 5.047802 TGGCAAAGCTTTCTTATTTCTCCTG 60.048 40.000 9.23 0.00 31.02 3.86
2735 2929 5.183904 GGCAAAGCTTTCTTATTTCTCCTGA 59.816 40.000 9.23 0.00 31.02 3.86
2736 2930 6.294731 GGCAAAGCTTTCTTATTTCTCCTGAA 60.295 38.462 9.23 0.00 31.02 3.02
2737 2931 7.147976 GCAAAGCTTTCTTATTTCTCCTGAAA 58.852 34.615 9.23 0.00 44.99 2.69
2738 2932 7.653311 GCAAAGCTTTCTTATTTCTCCTGAAAA 59.347 33.333 9.23 0.00 44.22 2.29
2739 2933 9.702494 CAAAGCTTTCTTATTTCTCCTGAAAAT 57.298 29.630 9.23 0.00 44.22 1.82
2742 2936 9.746457 AGCTTTCTTATTTCTCCTGAAAATAGT 57.254 29.630 0.00 0.00 44.22 2.12
2751 2945 8.758633 TTTCTCCTGAAAATAGTAGAAGTTCG 57.241 34.615 0.00 0.00 39.02 3.95
2752 2946 6.331061 TCTCCTGAAAATAGTAGAAGTTCGC 58.669 40.000 0.00 0.00 0.00 4.70
2753 2947 6.032956 TCCTGAAAATAGTAGAAGTTCGCA 57.967 37.500 0.00 0.00 0.00 5.10
2754 2948 6.460781 TCCTGAAAATAGTAGAAGTTCGCAA 58.539 36.000 0.00 0.00 0.00 4.85
2755 2949 6.590292 TCCTGAAAATAGTAGAAGTTCGCAAG 59.410 38.462 0.00 0.00 0.00 4.01
2756 2950 6.165659 TGAAAATAGTAGAAGTTCGCAAGC 57.834 37.500 0.00 0.00 37.18 4.01
2757 2951 5.932303 TGAAAATAGTAGAAGTTCGCAAGCT 59.068 36.000 0.00 0.00 37.18 3.74
2758 2952 7.094631 TGAAAATAGTAGAAGTTCGCAAGCTA 58.905 34.615 0.00 0.00 37.18 3.32
2759 2953 7.275779 TGAAAATAGTAGAAGTTCGCAAGCTAG 59.724 37.037 0.00 0.00 37.18 3.42
2760 2954 5.838531 ATAGTAGAAGTTCGCAAGCTAGT 57.161 39.130 0.00 0.00 37.18 2.57
2761 2955 4.522722 AGTAGAAGTTCGCAAGCTAGTT 57.477 40.909 0.00 0.00 37.18 2.24
2762 2956 4.884247 AGTAGAAGTTCGCAAGCTAGTTT 58.116 39.130 0.00 0.00 37.18 2.66
2763 2957 4.686554 AGTAGAAGTTCGCAAGCTAGTTTG 59.313 41.667 14.43 14.43 37.18 2.93
2764 2958 3.728845 AGAAGTTCGCAAGCTAGTTTGA 58.271 40.909 21.97 0.11 37.18 2.69
2765 2959 4.319177 AGAAGTTCGCAAGCTAGTTTGAT 58.681 39.130 21.97 1.54 37.18 2.57
2766 2960 4.390297 AGAAGTTCGCAAGCTAGTTTGATC 59.610 41.667 21.97 5.34 37.18 2.92
2767 2961 3.664107 AGTTCGCAAGCTAGTTTGATCA 58.336 40.909 21.97 0.00 37.18 2.92
2768 2962 3.681897 AGTTCGCAAGCTAGTTTGATCAG 59.318 43.478 21.97 9.99 37.18 2.90
2769 2963 2.621338 TCGCAAGCTAGTTTGATCAGG 58.379 47.619 21.97 6.09 37.18 3.86
2770 2964 1.667724 CGCAAGCTAGTTTGATCAGGG 59.332 52.381 21.97 0.37 0.00 4.45
2771 2965 1.403323 GCAAGCTAGTTTGATCAGGGC 59.597 52.381 21.97 1.91 0.00 5.19
2772 2966 2.715046 CAAGCTAGTTTGATCAGGGCA 58.285 47.619 13.61 0.00 0.00 5.36
2773 2967 3.285484 CAAGCTAGTTTGATCAGGGCAT 58.715 45.455 13.61 0.00 0.00 4.40
2774 2968 2.928334 AGCTAGTTTGATCAGGGCATG 58.072 47.619 0.00 0.00 0.00 4.06
2775 2969 2.240667 AGCTAGTTTGATCAGGGCATGT 59.759 45.455 0.00 0.00 0.00 3.21
2776 2970 3.019564 GCTAGTTTGATCAGGGCATGTT 58.980 45.455 0.00 0.00 0.00 2.71
2777 2971 3.065925 GCTAGTTTGATCAGGGCATGTTC 59.934 47.826 0.00 0.54 0.00 3.18
2778 2972 3.159213 AGTTTGATCAGGGCATGTTCA 57.841 42.857 8.69 8.69 36.14 3.18
2779 2973 3.499338 AGTTTGATCAGGGCATGTTCAA 58.501 40.909 18.54 18.54 42.94 2.69
2781 2975 4.524316 TTTGATCAGGGCATGTTCAAAG 57.476 40.909 25.75 0.00 45.84 2.77
2782 2976 3.159213 TGATCAGGGCATGTTCAAAGT 57.841 42.857 10.20 0.00 35.23 2.66
2783 2977 3.499338 TGATCAGGGCATGTTCAAAGTT 58.501 40.909 10.20 0.00 35.23 2.66
2784 2978 3.896888 TGATCAGGGCATGTTCAAAGTTT 59.103 39.130 10.20 0.00 35.23 2.66
2785 2979 4.344679 TGATCAGGGCATGTTCAAAGTTTT 59.655 37.500 10.20 0.00 35.23 2.43
2786 2980 4.751767 TCAGGGCATGTTCAAAGTTTTT 57.248 36.364 0.00 0.00 0.00 1.94
2787 2981 4.440880 TCAGGGCATGTTCAAAGTTTTTG 58.559 39.130 0.00 0.00 0.00 2.44
2788 2982 4.081198 TCAGGGCATGTTCAAAGTTTTTGT 60.081 37.500 0.00 0.00 0.00 2.83
2789 2983 4.635324 CAGGGCATGTTCAAAGTTTTTGTT 59.365 37.500 0.00 0.00 0.00 2.83
2790 2984 4.635324 AGGGCATGTTCAAAGTTTTTGTTG 59.365 37.500 0.00 0.00 0.00 3.33
2791 2985 4.201901 GGGCATGTTCAAAGTTTTTGTTGG 60.202 41.667 0.00 0.00 0.00 3.77
2792 2986 4.633565 GGCATGTTCAAAGTTTTTGTTGGA 59.366 37.500 0.00 0.00 0.00 3.53
2793 2987 5.123027 GGCATGTTCAAAGTTTTTGTTGGAA 59.877 36.000 0.00 0.00 0.00 3.53
2794 2988 6.183360 GGCATGTTCAAAGTTTTTGTTGGAAT 60.183 34.615 0.00 0.00 0.00 3.01
2795 2989 7.249858 GCATGTTCAAAGTTTTTGTTGGAATT 58.750 30.769 0.00 0.00 0.00 2.17
2796 2990 7.754475 GCATGTTCAAAGTTTTTGTTGGAATTT 59.246 29.630 0.00 0.00 0.00 1.82
2797 2991 9.623350 CATGTTCAAAGTTTTTGTTGGAATTTT 57.377 25.926 1.92 0.00 0.00 1.82
2825 3019 9.959749 TCATGTTCTATGTTTTGACCTAAAAAC 57.040 29.630 5.76 5.76 45.91 2.43
2826 3020 9.191995 CATGTTCTATGTTTTGACCTAAAAACC 57.808 33.333 9.37 0.00 45.39 3.27
2827 3021 8.294954 TGTTCTATGTTTTGACCTAAAAACCA 57.705 30.769 9.37 0.56 45.39 3.67
2828 3022 8.192110 TGTTCTATGTTTTGACCTAAAAACCAC 58.808 33.333 9.37 1.69 45.39 4.16
2829 3023 6.961576 TCTATGTTTTGACCTAAAAACCACG 58.038 36.000 9.37 0.00 45.39 4.94
2830 3024 4.373348 TGTTTTGACCTAAAAACCACGG 57.627 40.909 9.37 0.00 45.39 4.94
2831 3025 4.015084 TGTTTTGACCTAAAAACCACGGA 58.985 39.130 9.37 0.00 45.39 4.69
2832 3026 4.461781 TGTTTTGACCTAAAAACCACGGAA 59.538 37.500 9.37 0.00 45.39 4.30
2833 3027 5.047519 TGTTTTGACCTAAAAACCACGGAAA 60.048 36.000 9.37 0.00 45.39 3.13
2834 3028 4.904253 TTGACCTAAAAACCACGGAAAG 57.096 40.909 0.00 0.00 0.00 2.62
2835 3029 2.619646 TGACCTAAAAACCACGGAAAGC 59.380 45.455 0.00 0.00 0.00 3.51
2836 3030 2.882761 GACCTAAAAACCACGGAAAGCT 59.117 45.455 0.00 0.00 0.00 3.74
2837 3031 2.621526 ACCTAAAAACCACGGAAAGCTG 59.378 45.455 0.00 0.00 0.00 4.24
2838 3032 2.621526 CCTAAAAACCACGGAAAGCTGT 59.378 45.455 0.00 0.00 0.00 4.40
2844 3038 3.289128 CACGGAAAGCTGTGTCTGA 57.711 52.632 7.87 0.00 44.61 3.27
2845 3039 1.800805 CACGGAAAGCTGTGTCTGAT 58.199 50.000 7.87 0.00 44.61 2.90
2846 3040 2.146342 CACGGAAAGCTGTGTCTGATT 58.854 47.619 7.87 0.00 44.61 2.57
2847 3041 2.096069 CACGGAAAGCTGTGTCTGATTG 60.096 50.000 7.87 0.00 44.61 2.67
2848 3042 1.466167 CGGAAAGCTGTGTCTGATTGG 59.534 52.381 0.00 0.00 0.00 3.16
2849 3043 2.508526 GGAAAGCTGTGTCTGATTGGT 58.491 47.619 0.00 0.00 0.00 3.67
2850 3044 2.485814 GGAAAGCTGTGTCTGATTGGTC 59.514 50.000 0.00 0.00 0.00 4.02
2851 3045 3.406764 GAAAGCTGTGTCTGATTGGTCT 58.593 45.455 0.00 0.00 0.00 3.85
2852 3046 2.469274 AGCTGTGTCTGATTGGTCTG 57.531 50.000 0.00 0.00 0.00 3.51
2853 3047 1.696336 AGCTGTGTCTGATTGGTCTGT 59.304 47.619 0.00 0.00 0.00 3.41
2854 3048 2.899900 AGCTGTGTCTGATTGGTCTGTA 59.100 45.455 0.00 0.00 0.00 2.74
2855 3049 3.056250 AGCTGTGTCTGATTGGTCTGTAG 60.056 47.826 0.00 0.00 0.00 2.74
2856 3050 3.257393 CTGTGTCTGATTGGTCTGTAGC 58.743 50.000 0.00 0.00 0.00 3.58
2857 3051 2.028112 TGTGTCTGATTGGTCTGTAGCC 60.028 50.000 0.00 0.00 0.00 3.93
2858 3052 2.028112 GTGTCTGATTGGTCTGTAGCCA 60.028 50.000 0.00 0.00 0.00 4.75
2859 3053 2.234661 TGTCTGATTGGTCTGTAGCCAG 59.765 50.000 0.00 0.00 40.25 4.85
2860 3054 2.234908 GTCTGATTGGTCTGTAGCCAGT 59.765 50.000 0.00 0.00 39.82 4.00
2861 3055 2.497675 TCTGATTGGTCTGTAGCCAGTC 59.502 50.000 9.34 9.34 41.38 3.51
2862 3056 2.499289 CTGATTGGTCTGTAGCCAGTCT 59.501 50.000 14.13 0.00 41.51 3.24
2863 3057 3.701542 CTGATTGGTCTGTAGCCAGTCTA 59.298 47.826 14.13 5.48 41.51 2.59
2864 3058 3.701542 TGATTGGTCTGTAGCCAGTCTAG 59.298 47.826 14.13 0.00 41.51 2.43
2865 3059 1.475403 TGGTCTGTAGCCAGTCTAGC 58.525 55.000 0.00 0.00 39.82 3.42
2866 3060 1.272480 TGGTCTGTAGCCAGTCTAGCA 60.272 52.381 0.00 0.00 39.82 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.408182 ACCACTAGTCACCATGCTTATC 57.592 45.455 0.00 0.00 0.00 1.75
1 2 6.500589 AATACCACTAGTCACCATGCTTAT 57.499 37.500 0.00 0.00 0.00 1.73
2 3 5.950544 AATACCACTAGTCACCATGCTTA 57.049 39.130 0.00 0.00 0.00 3.09
3 4 4.844349 AATACCACTAGTCACCATGCTT 57.156 40.909 0.00 0.00 0.00 3.91
4 5 5.743130 GCATAATACCACTAGTCACCATGCT 60.743 44.000 12.82 0.00 33.89 3.79
5 6 4.452455 GCATAATACCACTAGTCACCATGC 59.548 45.833 0.00 0.35 0.00 4.06
6 7 4.686091 CGCATAATACCACTAGTCACCATG 59.314 45.833 0.00 0.00 0.00 3.66
7 8 4.262463 CCGCATAATACCACTAGTCACCAT 60.262 45.833 0.00 0.00 0.00 3.55
8 9 3.069016 CCGCATAATACCACTAGTCACCA 59.931 47.826 0.00 0.00 0.00 4.17
9 10 3.069158 ACCGCATAATACCACTAGTCACC 59.931 47.826 0.00 0.00 0.00 4.02
10 11 4.049186 CACCGCATAATACCACTAGTCAC 58.951 47.826 0.00 0.00 0.00 3.67
11 12 3.702548 ACACCGCATAATACCACTAGTCA 59.297 43.478 0.00 0.00 0.00 3.41
12 13 4.317671 ACACCGCATAATACCACTAGTC 57.682 45.455 0.00 0.00 0.00 2.59
13 14 5.857471 TTACACCGCATAATACCACTAGT 57.143 39.130 0.00 0.00 0.00 2.57
14 15 7.724305 ATTTTACACCGCATAATACCACTAG 57.276 36.000 0.00 0.00 0.00 2.57
15 16 7.988599 AGAATTTTACACCGCATAATACCACTA 59.011 33.333 0.00 0.00 0.00 2.74
16 17 6.826741 AGAATTTTACACCGCATAATACCACT 59.173 34.615 0.00 0.00 0.00 4.00
17 18 7.023197 AGAATTTTACACCGCATAATACCAC 57.977 36.000 0.00 0.00 0.00 4.16
18 19 7.337184 TGAAGAATTTTACACCGCATAATACCA 59.663 33.333 0.00 0.00 0.00 3.25
19 20 7.642586 GTGAAGAATTTTACACCGCATAATACC 59.357 37.037 0.00 0.00 0.00 2.73
20 21 7.372396 CGTGAAGAATTTTACACCGCATAATAC 59.628 37.037 0.00 0.00 0.00 1.89
21 22 7.403421 CGTGAAGAATTTTACACCGCATAATA 58.597 34.615 0.00 0.00 0.00 0.98
22 23 6.255215 CGTGAAGAATTTTACACCGCATAAT 58.745 36.000 0.00 0.00 0.00 1.28
23 24 5.391097 CCGTGAAGAATTTTACACCGCATAA 60.391 40.000 0.00 0.00 0.00 1.90
24 25 4.093703 CCGTGAAGAATTTTACACCGCATA 59.906 41.667 0.00 0.00 0.00 3.14
25 26 3.119990 CCGTGAAGAATTTTACACCGCAT 60.120 43.478 0.00 0.00 0.00 4.73
26 27 2.224549 CCGTGAAGAATTTTACACCGCA 59.775 45.455 0.00 0.00 0.00 5.69
27 28 2.413634 CCCGTGAAGAATTTTACACCGC 60.414 50.000 0.00 0.00 0.00 5.68
28 29 2.809696 ACCCGTGAAGAATTTTACACCG 59.190 45.455 0.00 0.00 0.00 4.94
29 30 4.517832 AGAACCCGTGAAGAATTTTACACC 59.482 41.667 0.00 0.00 0.00 4.16
30 31 5.684550 AGAACCCGTGAAGAATTTTACAC 57.315 39.130 0.00 0.00 0.00 2.90
31 32 5.009210 CCAAGAACCCGTGAAGAATTTTACA 59.991 40.000 0.00 0.00 0.00 2.41
32 33 5.009310 ACCAAGAACCCGTGAAGAATTTTAC 59.991 40.000 0.00 0.00 0.00 2.01
33 34 5.134661 ACCAAGAACCCGTGAAGAATTTTA 58.865 37.500 0.00 0.00 0.00 1.52
34 35 3.958147 ACCAAGAACCCGTGAAGAATTTT 59.042 39.130 0.00 0.00 0.00 1.82
35 36 3.562182 ACCAAGAACCCGTGAAGAATTT 58.438 40.909 0.00 0.00 0.00 1.82
36 37 3.223674 ACCAAGAACCCGTGAAGAATT 57.776 42.857 0.00 0.00 0.00 2.17
37 38 2.951229 ACCAAGAACCCGTGAAGAAT 57.049 45.000 0.00 0.00 0.00 2.40
38 39 2.721425 AACCAAGAACCCGTGAAGAA 57.279 45.000 0.00 0.00 0.00 2.52
39 40 2.967201 TCTAACCAAGAACCCGTGAAGA 59.033 45.455 0.00 0.00 0.00 2.87
40 41 3.396260 TCTAACCAAGAACCCGTGAAG 57.604 47.619 0.00 0.00 0.00 3.02
41 42 3.842007 TTCTAACCAAGAACCCGTGAA 57.158 42.857 0.00 0.00 39.36 3.18
42 43 3.842007 TTTCTAACCAAGAACCCGTGA 57.158 42.857 0.00 0.00 44.02 4.35
43 44 4.904253 TTTTTCTAACCAAGAACCCGTG 57.096 40.909 0.00 0.00 44.02 4.94
44 45 4.279922 CCATTTTTCTAACCAAGAACCCGT 59.720 41.667 0.00 0.00 44.02 5.28
45 46 4.279922 ACCATTTTTCTAACCAAGAACCCG 59.720 41.667 0.00 0.00 44.02 5.28
46 47 5.303333 TCACCATTTTTCTAACCAAGAACCC 59.697 40.000 0.00 0.00 44.02 4.11
47 48 6.040504 AGTCACCATTTTTCTAACCAAGAACC 59.959 38.462 0.00 0.00 44.02 3.62
48 49 6.918022 CAGTCACCATTTTTCTAACCAAGAAC 59.082 38.462 0.00 0.00 44.02 3.01
49 50 6.460953 GCAGTCACCATTTTTCTAACCAAGAA 60.461 38.462 0.00 0.00 42.62 2.52
50 51 5.009610 GCAGTCACCATTTTTCTAACCAAGA 59.990 40.000 0.00 0.00 0.00 3.02
51 52 5.221224 TGCAGTCACCATTTTTCTAACCAAG 60.221 40.000 0.00 0.00 0.00 3.61
52 53 4.646945 TGCAGTCACCATTTTTCTAACCAA 59.353 37.500 0.00 0.00 0.00 3.67
53 54 4.211125 TGCAGTCACCATTTTTCTAACCA 58.789 39.130 0.00 0.00 0.00 3.67
54 55 4.846779 TGCAGTCACCATTTTTCTAACC 57.153 40.909 0.00 0.00 0.00 2.85
55 56 8.810652 TTAAATGCAGTCACCATTTTTCTAAC 57.189 30.769 4.90 0.00 41.60 2.34
56 57 8.637986 ACTTAAATGCAGTCACCATTTTTCTAA 58.362 29.630 4.90 0.00 41.60 2.10
57 58 8.177119 ACTTAAATGCAGTCACCATTTTTCTA 57.823 30.769 4.90 0.00 41.60 2.10
58 59 7.054491 ACTTAAATGCAGTCACCATTTTTCT 57.946 32.000 4.90 0.00 41.60 2.52
59 60 6.088085 CGACTTAAATGCAGTCACCATTTTTC 59.912 38.462 4.90 0.84 41.60 2.29
60 61 5.920273 CGACTTAAATGCAGTCACCATTTTT 59.080 36.000 4.90 0.00 41.60 1.94
61 62 5.460646 CGACTTAAATGCAGTCACCATTTT 58.539 37.500 4.90 0.00 41.60 1.82
62 63 4.082787 CCGACTTAAATGCAGTCACCATTT 60.083 41.667 0.00 4.95 43.25 2.32
63 64 3.440173 CCGACTTAAATGCAGTCACCATT 59.560 43.478 0.00 0.00 40.78 3.16
64 65 3.009723 CCGACTTAAATGCAGTCACCAT 58.990 45.455 0.00 0.00 40.78 3.55
65 66 2.224426 ACCGACTTAAATGCAGTCACCA 60.224 45.455 0.00 0.00 40.78 4.17
66 67 2.159627 CACCGACTTAAATGCAGTCACC 59.840 50.000 0.00 0.00 40.78 4.02
67 68 2.412847 GCACCGACTTAAATGCAGTCAC 60.413 50.000 0.00 0.00 40.78 3.67
68 69 1.804151 GCACCGACTTAAATGCAGTCA 59.196 47.619 0.00 0.00 40.78 3.41
69 70 1.804151 TGCACCGACTTAAATGCAGTC 59.196 47.619 0.00 0.00 42.92 3.51
70 71 1.890876 TGCACCGACTTAAATGCAGT 58.109 45.000 0.00 0.00 42.92 4.40
72 73 0.878416 GGTGCACCGACTTAAATGCA 59.122 50.000 22.49 0.00 45.45 3.96
73 74 1.165270 AGGTGCACCGACTTAAATGC 58.835 50.000 29.68 1.50 42.08 3.56
74 75 4.671766 GCTTAAGGTGCACCGACTTAAATG 60.672 45.833 29.68 17.28 42.08 2.32
75 76 3.439129 GCTTAAGGTGCACCGACTTAAAT 59.561 43.478 29.68 7.25 42.08 1.40
76 77 2.809696 GCTTAAGGTGCACCGACTTAAA 59.190 45.455 29.68 16.48 42.08 1.52
77 78 2.224329 TGCTTAAGGTGCACCGACTTAA 60.224 45.455 29.68 24.63 42.08 1.85
78 79 1.345089 TGCTTAAGGTGCACCGACTTA 59.655 47.619 29.68 19.62 42.08 2.24
79 80 0.107831 TGCTTAAGGTGCACCGACTT 59.892 50.000 29.68 20.67 42.08 3.01
80 81 0.324943 ATGCTTAAGGTGCACCGACT 59.675 50.000 29.68 20.00 43.59 4.18
81 82 1.165270 AATGCTTAAGGTGCACCGAC 58.835 50.000 29.68 18.03 43.59 4.79
82 83 1.539388 CAAATGCTTAAGGTGCACCGA 59.461 47.619 29.68 19.27 43.59 4.69
83 84 1.539388 TCAAATGCTTAAGGTGCACCG 59.461 47.619 29.68 16.74 43.59 4.94
84 85 2.558359 AGTCAAATGCTTAAGGTGCACC 59.442 45.455 29.22 29.22 43.59 5.01
85 86 3.923017 AGTCAAATGCTTAAGGTGCAC 57.077 42.857 8.80 8.80 43.59 4.57
86 87 3.636300 ACAAGTCAAATGCTTAAGGTGCA 59.364 39.130 4.29 0.00 44.95 4.57
87 88 4.243007 ACAAGTCAAATGCTTAAGGTGC 57.757 40.909 4.29 0.00 0.00 5.01
88 89 8.702438 CAATTTACAAGTCAAATGCTTAAGGTG 58.298 33.333 4.29 0.00 0.00 4.00
89 90 8.421002 ACAATTTACAAGTCAAATGCTTAAGGT 58.579 29.630 4.29 0.00 0.00 3.50
90 91 8.816640 ACAATTTACAAGTCAAATGCTTAAGG 57.183 30.769 4.29 0.00 0.00 2.69
106 107 9.988815 ACCAGCAACATTTTATTACAATTTACA 57.011 25.926 0.00 0.00 0.00 2.41
108 109 9.988815 ACACCAGCAACATTTTATTACAATTTA 57.011 25.926 0.00 0.00 0.00 1.40
109 110 8.772705 CACACCAGCAACATTTTATTACAATTT 58.227 29.630 0.00 0.00 0.00 1.82
110 111 8.147058 TCACACCAGCAACATTTTATTACAATT 58.853 29.630 0.00 0.00 0.00 2.32
111 112 7.665690 TCACACCAGCAACATTTTATTACAAT 58.334 30.769 0.00 0.00 0.00 2.71
112 113 7.043961 TCACACCAGCAACATTTTATTACAA 57.956 32.000 0.00 0.00 0.00 2.41
113 114 6.264292 ACTCACACCAGCAACATTTTATTACA 59.736 34.615 0.00 0.00 0.00 2.41
114 115 6.582295 CACTCACACCAGCAACATTTTATTAC 59.418 38.462 0.00 0.00 0.00 1.89
115 116 6.264292 ACACTCACACCAGCAACATTTTATTA 59.736 34.615 0.00 0.00 0.00 0.98
116 117 5.068987 ACACTCACACCAGCAACATTTTATT 59.931 36.000 0.00 0.00 0.00 1.40
117 118 4.584325 ACACTCACACCAGCAACATTTTAT 59.416 37.500 0.00 0.00 0.00 1.40
118 119 3.951037 ACACTCACACCAGCAACATTTTA 59.049 39.130 0.00 0.00 0.00 1.52
119 120 2.760092 ACACTCACACCAGCAACATTTT 59.240 40.909 0.00 0.00 0.00 1.82
156 157 5.420725 TGTTATCTAAGGTGACACAGCAT 57.579 39.130 8.08 0.00 33.95 3.79
178 179 6.263168 CCAAAGTGAAACACTAAGGACTTCAT 59.737 38.462 13.50 0.00 44.62 2.57
190 191 5.587289 TCATTAACAGCCAAAGTGAAACAC 58.413 37.500 0.00 0.00 41.43 3.32
196 197 5.801947 GCATAACTCATTAACAGCCAAAGTG 59.198 40.000 0.00 0.00 0.00 3.16
197 198 5.105756 GGCATAACTCATTAACAGCCAAAGT 60.106 40.000 0.00 0.00 37.04 2.66
202 203 3.202906 TCGGCATAACTCATTAACAGCC 58.797 45.455 0.00 0.00 35.26 4.85
204 205 6.757010 AGTAACTCGGCATAACTCATTAACAG 59.243 38.462 0.00 0.00 0.00 3.16
210 211 4.647853 TGGTAGTAACTCGGCATAACTCAT 59.352 41.667 0.00 0.00 0.00 2.90
223 224 4.962995 ACATGATGGCTAGTGGTAGTAACT 59.037 41.667 0.00 0.00 0.00 2.24
229 230 3.774766 AGACAACATGATGGCTAGTGGTA 59.225 43.478 10.04 0.00 36.73 3.25
230 231 2.573462 AGACAACATGATGGCTAGTGGT 59.427 45.455 10.04 0.00 36.73 4.16
231 232 2.941064 CAGACAACATGATGGCTAGTGG 59.059 50.000 11.51 0.00 36.18 4.00
244 245 1.209261 TGTGCAACCTCTCAGACAACA 59.791 47.619 0.00 0.00 34.36 3.33
246 247 2.104622 TCATGTGCAACCTCTCAGACAA 59.895 45.455 0.00 0.00 34.36 3.18
248 249 2.462456 TCATGTGCAACCTCTCAGAC 57.538 50.000 0.00 0.00 34.36 3.51
252 253 6.441093 TCAATATTTCATGTGCAACCTCTC 57.559 37.500 0.00 0.00 34.36 3.20
261 262 8.936070 ATCACCACATTTCAATATTTCATGTG 57.064 30.769 17.32 17.32 42.89 3.21
276 277 9.466497 AGACTTCAAAATGTATATCACCACATT 57.534 29.630 0.00 0.00 45.03 2.71
277 278 9.466497 AAGACTTCAAAATGTATATCACCACAT 57.534 29.630 0.00 0.00 36.96 3.21
278 279 8.729756 CAAGACTTCAAAATGTATATCACCACA 58.270 33.333 0.00 0.00 0.00 4.17
281 282 7.067494 AGGCAAGACTTCAAAATGTATATCACC 59.933 37.037 0.00 0.00 0.00 4.02
287 288 7.725251 TGAAAAGGCAAGACTTCAAAATGTAT 58.275 30.769 0.00 0.00 0.00 2.29
290 291 6.238184 GGTTGAAAAGGCAAGACTTCAAAATG 60.238 38.462 0.00 0.00 38.97 2.32
296 297 4.142160 ACTTGGTTGAAAAGGCAAGACTTC 60.142 41.667 0.00 0.00 0.00 3.01
304 305 4.240096 CATCATCACTTGGTTGAAAAGGC 58.760 43.478 0.00 0.00 0.00 4.35
322 323 4.943093 CCACACATAACTTGGATGACATCA 59.057 41.667 17.08 1.04 31.39 3.07
327 328 5.221945 TGTTACCCACACATAACTTGGATGA 60.222 40.000 0.00 0.00 33.32 2.92
328 329 5.007034 TGTTACCCACACATAACTTGGATG 58.993 41.667 0.00 0.00 33.32 3.51
329 330 5.249780 TGTTACCCACACATAACTTGGAT 57.750 39.130 0.00 0.00 33.32 3.41
330 331 4.647611 CTGTTACCCACACATAACTTGGA 58.352 43.478 0.00 0.00 33.32 3.53
339 340 2.281208 GCCGCTGTTACCCACACA 60.281 61.111 0.00 0.00 0.00 3.72
340 341 3.419759 CGCCGCTGTTACCCACAC 61.420 66.667 0.00 0.00 0.00 3.82
346 348 0.584876 AAACACTTCGCCGCTGTTAC 59.415 50.000 0.00 0.00 0.00 2.50
353 355 1.002900 ACAACATGAAACACTTCGCCG 60.003 47.619 0.00 0.00 33.94 6.46
355 357 1.780860 GCACAACATGAAACACTTCGC 59.219 47.619 0.00 0.00 33.94 4.70
356 358 2.384382 GGCACAACATGAAACACTTCG 58.616 47.619 0.00 0.00 33.94 3.79
362 364 3.320826 AGGTAAAGGGCACAACATGAAAC 59.679 43.478 0.00 0.00 0.00 2.78
365 367 2.158534 ACAGGTAAAGGGCACAACATGA 60.159 45.455 0.00 0.00 0.00 3.07
368 370 1.493022 AGACAGGTAAAGGGCACAACA 59.507 47.619 0.00 0.00 0.00 3.33
380 508 6.604396 TCAACAAGAACGGATATAGACAGGTA 59.396 38.462 0.00 0.00 0.00 3.08
410 538 6.551601 AGAAACTACAAGAGTGAGAGGAGAAA 59.448 38.462 0.00 0.00 38.87 2.52
413 541 5.105917 GGAGAAACTACAAGAGTGAGAGGAG 60.106 48.000 0.00 0.00 38.87 3.69
415 543 4.524714 TGGAGAAACTACAAGAGTGAGAGG 59.475 45.833 0.00 0.00 38.87 3.69
425 553 4.594123 TGTCGACATGGAGAAACTACAA 57.406 40.909 15.76 0.00 0.00 2.41
429 557 4.543590 AGAATGTCGACATGGAGAAACT 57.456 40.909 30.57 13.11 36.56 2.66
461 590 9.988815 GGCAAATATAGAACAGAAGATTAGAGA 57.011 33.333 0.00 0.00 0.00 3.10
462 591 9.213799 GGGCAAATATAGAACAGAAGATTAGAG 57.786 37.037 0.00 0.00 0.00 2.43
463 592 8.713971 TGGGCAAATATAGAACAGAAGATTAGA 58.286 33.333 0.00 0.00 0.00 2.10
464 593 8.908786 TGGGCAAATATAGAACAGAAGATTAG 57.091 34.615 0.00 0.00 0.00 1.73
465 594 7.445402 GCTGGGCAAATATAGAACAGAAGATTA 59.555 37.037 0.00 0.00 0.00 1.75
475 647 9.545928 AATAATAATGGCTGGGCAAATATAGAA 57.454 29.630 0.12 0.00 0.00 2.10
477 649 7.707893 GCAATAATAATGGCTGGGCAAATATAG 59.292 37.037 0.12 0.00 0.00 1.31
531 703 9.881649 TCACAGAAAGGATAATGCTGATATATC 57.118 33.333 5.73 5.73 0.00 1.63
535 707 9.716531 CTAATCACAGAAAGGATAATGCTGATA 57.283 33.333 0.00 0.00 0.00 2.15
536 708 7.174599 GCTAATCACAGAAAGGATAATGCTGAT 59.825 37.037 0.00 0.00 0.00 2.90
537 709 6.484643 GCTAATCACAGAAAGGATAATGCTGA 59.515 38.462 0.00 0.00 0.00 4.26
799 971 6.295688 GCGACCATCCCTAGATTATTCCTAAA 60.296 42.308 0.00 0.00 0.00 1.85
814 986 1.740025 CAAAAGAGAAGCGACCATCCC 59.260 52.381 0.00 0.00 0.00 3.85
822 994 2.222027 AGTTCCCACAAAAGAGAAGCG 58.778 47.619 0.00 0.00 0.00 4.68
827 999 5.228945 TCTAAGGAGTTCCCACAAAAGAG 57.771 43.478 0.00 0.00 37.41 2.85
882 1054 5.204833 CACAAAATCTACTTGACCAACACG 58.795 41.667 0.00 0.00 0.00 4.49
917 1089 7.778382 TCACTGGCAGATTACTATCAAGTACTA 59.222 37.037 23.66 0.00 37.94 1.82
918 1090 6.607600 TCACTGGCAGATTACTATCAAGTACT 59.392 38.462 23.66 0.00 37.94 2.73
919 1091 6.806751 TCACTGGCAGATTACTATCAAGTAC 58.193 40.000 23.66 0.00 37.94 2.73
920 1092 7.603180 ATCACTGGCAGATTACTATCAAGTA 57.397 36.000 23.66 0.00 37.15 2.24
921 1093 5.939764 TCACTGGCAGATTACTATCAAGT 57.060 39.130 23.66 0.00 39.91 3.16
949 1121 5.888161 AGAAAGGAAGCACATAATGTTAGGG 59.112 40.000 0.00 0.00 0.00 3.53
988 1164 5.448496 GCACGATGGACATGCTTAACAAATA 60.448 40.000 0.00 0.00 36.40 1.40
990 1166 3.365868 GCACGATGGACATGCTTAACAAA 60.366 43.478 0.00 0.00 36.40 2.83
993 1169 1.737236 TGCACGATGGACATGCTTAAC 59.263 47.619 0.00 0.00 40.13 2.01
1029 1205 1.581447 GGCAGTAGCACCAAACAGC 59.419 57.895 0.00 0.00 44.61 4.40
1063 1239 3.663176 CTGTGCACGTGCCCTTGG 61.663 66.667 35.72 17.85 41.18 3.61
1082 1258 1.649321 ATCACTGAAGGAGGAGTGCA 58.351 50.000 0.00 0.00 39.61 4.57
1089 1265 5.251764 ACATCAAAGGAATCACTGAAGGAG 58.748 41.667 0.00 0.00 0.00 3.69
1107 1283 7.521669 TCACTATCCTCTCTTGAGATACATCA 58.478 38.462 0.41 0.00 42.73 3.07
1108 1284 7.994425 TCACTATCCTCTCTTGAGATACATC 57.006 40.000 0.41 0.00 42.73 3.06
1289 1465 4.640364 TCCATTGCCAGAAAAATCAAACC 58.360 39.130 0.00 0.00 0.00 3.27
1321 1497 6.947464 AGTAGTTGCCATACTGAAATGTACT 58.053 36.000 0.00 0.00 32.27 2.73
1347 1523 4.730949 ATGCAAATCATCCACCTCTTTG 57.269 40.909 0.00 0.00 0.00 2.77
1370 1546 6.806739 GTGTTCCTTAAAATGCTGGATTACAC 59.193 38.462 6.23 6.23 34.96 2.90
1457 1633 6.096036 CGAGATACATCTTGATACATGGACC 58.904 44.000 0.00 0.00 40.12 4.46
1483 1659 6.942005 TCAAATCTGCCCGATATGTTGATAAT 59.058 34.615 0.00 0.00 27.11 1.28
1593 1769 2.029290 ACGGTACATGAACTGTCCTGTC 60.029 50.000 0.00 0.00 39.39 3.51
1638 1814 7.371159 CACTTTGCATATCTATCCTAAGACGA 58.629 38.462 0.00 0.00 0.00 4.20
1773 1949 6.208007 CAGCTCCCTCAATAATATGCAATTCA 59.792 38.462 0.00 0.00 0.00 2.57
1777 1953 5.308976 TCAGCTCCCTCAATAATATGCAA 57.691 39.130 0.00 0.00 0.00 4.08
1791 1967 7.364149 AGATGAATATCTATGATCAGCTCCC 57.636 40.000 0.09 0.00 41.82 4.30
1820 1996 3.490348 ACAATGTTAGCCAACTCAAGCT 58.510 40.909 0.00 0.00 43.20 3.74
1867 2043 7.872483 GGTTACATTTGTTCCAACATCATTCTT 59.128 33.333 0.00 0.00 38.95 2.52
1872 2048 6.266330 TCATGGTTACATTTGTTCCAACATCA 59.734 34.615 9.98 0.00 35.29 3.07
1898 2074 2.898612 ACATTGGGTCAAACATGCATCA 59.101 40.909 0.00 0.00 0.00 3.07
1953 2129 7.589958 TGACAGGGTAATTTTGTAACATGTT 57.410 32.000 16.68 16.68 35.92 2.71
1974 2150 6.912591 CACTTCACACCTCAACTAAATTTGAC 59.087 38.462 0.00 0.00 32.02 3.18
1989 2165 2.880890 AGAAGCATGAACACTTCACACC 59.119 45.455 11.76 0.00 43.84 4.16
2054 2230 7.066887 TCTGCAAGTGACTCAATGAAACTTTAA 59.933 33.333 3.73 0.00 33.76 1.52
2056 2232 5.357878 TCTGCAAGTGACTCAATGAAACTTT 59.642 36.000 3.73 0.00 33.76 2.66
2057 2233 4.883585 TCTGCAAGTGACTCAATGAAACTT 59.116 37.500 0.00 1.28 33.76 2.66
2058 2234 4.454678 TCTGCAAGTGACTCAATGAAACT 58.545 39.130 0.00 0.00 33.76 2.66
2074 2265 9.935477 TTCTACAGAGAACAGCAACTTCTGCAA 62.935 40.741 0.00 0.00 44.25 4.08
2108 2299 7.598118 TGCAAACAAACAATAGTGATACCAATG 59.402 33.333 0.00 0.00 0.00 2.82
2147 2339 5.417754 TCAGCTTGATTCTGATCTTCTGT 57.582 39.130 0.00 0.00 35.81 3.41
2228 2420 3.511146 CCATGGTCTTGGCATTAGTTGTT 59.489 43.478 2.57 0.00 0.00 2.83
2267 2459 6.256757 GCACACAGTATATTCTCTTCTTGGTC 59.743 42.308 0.00 0.00 0.00 4.02
2306 2498 3.300009 GAACCTTGAATCTTTGTGCACG 58.700 45.455 13.13 0.00 0.00 5.34
2390 2582 0.390340 GGAGCTGCATCAACGAGTCA 60.390 55.000 0.00 0.00 0.00 3.41
2420 2612 0.979187 TAACCTCGACATCCACCCCC 60.979 60.000 0.00 0.00 0.00 5.40
2618 2812 4.403734 TGGGACAGGAAACAAATAACCTC 58.596 43.478 0.00 0.00 0.00 3.85
2633 2827 7.580302 TTTCTAGATGAATCAGTTCTGGGACAG 60.580 40.741 0.00 0.00 45.95 3.51
2634 2828 5.272402 TCTAGATGAATCAGTTCTGGGACA 58.728 41.667 0.00 0.00 35.33 4.02
2635 2829 5.860941 TCTAGATGAATCAGTTCTGGGAC 57.139 43.478 0.00 0.00 35.33 4.46
2636 2830 6.874278 TTTCTAGATGAATCAGTTCTGGGA 57.126 37.500 0.00 0.00 35.33 4.37
2637 2831 7.468357 GCAATTTCTAGATGAATCAGTTCTGGG 60.468 40.741 0.00 0.00 35.33 4.45
2638 2832 7.282675 AGCAATTTCTAGATGAATCAGTTCTGG 59.717 37.037 0.00 0.00 35.33 3.86
2639 2833 8.211116 AGCAATTTCTAGATGAATCAGTTCTG 57.789 34.615 0.00 0.00 35.33 3.02
2640 2834 7.498570 GGAGCAATTTCTAGATGAATCAGTTCT 59.501 37.037 0.00 0.00 35.33 3.01
2641 2835 7.281774 TGGAGCAATTTCTAGATGAATCAGTTC 59.718 37.037 0.00 0.00 34.24 3.01
2642 2836 7.114754 TGGAGCAATTTCTAGATGAATCAGTT 58.885 34.615 0.00 0.00 34.24 3.16
2643 2837 6.656902 TGGAGCAATTTCTAGATGAATCAGT 58.343 36.000 0.00 0.00 34.24 3.41
2644 2838 7.747155 ATGGAGCAATTTCTAGATGAATCAG 57.253 36.000 0.00 0.00 34.24 2.90
2645 2839 7.776500 TGAATGGAGCAATTTCTAGATGAATCA 59.224 33.333 0.00 0.00 34.24 2.57
2646 2840 8.162878 TGAATGGAGCAATTTCTAGATGAATC 57.837 34.615 0.00 0.00 34.24 2.52
2647 2841 8.707796 ATGAATGGAGCAATTTCTAGATGAAT 57.292 30.769 0.00 0.00 34.24 2.57
2648 2842 9.060347 GTATGAATGGAGCAATTTCTAGATGAA 57.940 33.333 0.00 0.00 0.00 2.57
2649 2843 8.435187 AGTATGAATGGAGCAATTTCTAGATGA 58.565 33.333 0.00 0.00 0.00 2.92
2650 2844 8.618702 AGTATGAATGGAGCAATTTCTAGATG 57.381 34.615 0.00 0.00 0.00 2.90
2651 2845 9.941325 CTAGTATGAATGGAGCAATTTCTAGAT 57.059 33.333 0.00 0.00 0.00 1.98
2652 2846 8.928448 ACTAGTATGAATGGAGCAATTTCTAGA 58.072 33.333 0.00 0.00 0.00 2.43
2653 2847 9.553064 AACTAGTATGAATGGAGCAATTTCTAG 57.447 33.333 0.00 0.00 0.00 2.43
2654 2848 9.330063 CAACTAGTATGAATGGAGCAATTTCTA 57.670 33.333 0.00 0.00 0.00 2.10
2655 2849 7.201767 GCAACTAGTATGAATGGAGCAATTTCT 60.202 37.037 0.00 0.00 0.00 2.52
2656 2850 6.914757 GCAACTAGTATGAATGGAGCAATTTC 59.085 38.462 0.00 0.00 0.00 2.17
2657 2851 6.377996 TGCAACTAGTATGAATGGAGCAATTT 59.622 34.615 0.00 0.00 0.00 1.82
2658 2852 5.887598 TGCAACTAGTATGAATGGAGCAATT 59.112 36.000 0.00 0.00 0.00 2.32
2659 2853 5.297776 GTGCAACTAGTATGAATGGAGCAAT 59.702 40.000 0.00 0.00 0.00 3.56
2660 2854 4.635765 GTGCAACTAGTATGAATGGAGCAA 59.364 41.667 0.00 0.00 0.00 3.91
2661 2855 4.191544 GTGCAACTAGTATGAATGGAGCA 58.808 43.478 0.00 0.00 0.00 4.26
2662 2856 4.191544 TGTGCAACTAGTATGAATGGAGC 58.808 43.478 0.00 0.00 38.04 4.70
2663 2857 5.664457 TCTGTGCAACTAGTATGAATGGAG 58.336 41.667 0.00 0.00 38.04 3.86
2664 2858 5.675684 TCTGTGCAACTAGTATGAATGGA 57.324 39.130 0.00 0.00 38.04 3.41
2665 2859 6.932356 AATCTGTGCAACTAGTATGAATGG 57.068 37.500 0.00 0.00 38.04 3.16
2666 2860 8.239314 ACAAAATCTGTGCAACTAGTATGAATG 58.761 33.333 0.00 0.00 36.69 2.67
2667 2861 8.340618 ACAAAATCTGTGCAACTAGTATGAAT 57.659 30.769 0.00 0.00 36.69 2.57
2668 2862 7.744087 ACAAAATCTGTGCAACTAGTATGAA 57.256 32.000 0.00 0.00 36.69 2.57
2682 2876 2.553602 TGAATCAGCGCACAAAATCTGT 59.446 40.909 11.47 0.00 39.56 3.41
2683 2877 3.206034 TGAATCAGCGCACAAAATCTG 57.794 42.857 11.47 0.00 0.00 2.90
2684 2878 3.004629 TGTTGAATCAGCGCACAAAATCT 59.995 39.130 11.47 0.00 0.00 2.40
2685 2879 3.307674 TGTTGAATCAGCGCACAAAATC 58.692 40.909 11.47 0.14 0.00 2.17
2686 2880 3.367992 TGTTGAATCAGCGCACAAAAT 57.632 38.095 11.47 0.00 0.00 1.82
2687 2881 2.859526 TGTTGAATCAGCGCACAAAA 57.140 40.000 11.47 0.04 0.00 2.44
2688 2882 4.700268 ATATGTTGAATCAGCGCACAAA 57.300 36.364 11.47 0.00 0.00 2.83
2689 2883 4.413969 CAATATGTTGAATCAGCGCACAA 58.586 39.130 11.47 5.04 37.53 3.33
2690 2884 3.181498 CCAATATGTTGAATCAGCGCACA 60.181 43.478 11.47 2.99 37.53 4.57
2691 2885 3.365832 CCAATATGTTGAATCAGCGCAC 58.634 45.455 11.47 0.00 37.53 5.34
2692 2886 2.223548 GCCAATATGTTGAATCAGCGCA 60.224 45.455 11.47 0.00 37.53 6.09
2693 2887 2.223548 TGCCAATATGTTGAATCAGCGC 60.224 45.455 0.00 0.00 37.53 5.92
2694 2888 3.696281 TGCCAATATGTTGAATCAGCG 57.304 42.857 3.41 0.00 37.53 5.18
2695 2889 4.269363 GCTTTGCCAATATGTTGAATCAGC 59.731 41.667 3.41 2.77 37.53 4.26
2696 2890 5.657474 AGCTTTGCCAATATGTTGAATCAG 58.343 37.500 3.41 0.00 37.53 2.90
2697 2891 5.664294 AGCTTTGCCAATATGTTGAATCA 57.336 34.783 3.41 0.00 37.53 2.57
2698 2892 6.815142 AGAAAGCTTTGCCAATATGTTGAATC 59.185 34.615 18.30 0.00 37.53 2.52
2699 2893 6.704310 AGAAAGCTTTGCCAATATGTTGAAT 58.296 32.000 18.30 0.00 37.53 2.57
2700 2894 6.100404 AGAAAGCTTTGCCAATATGTTGAA 57.900 33.333 18.30 0.00 37.53 2.69
2701 2895 5.726980 AGAAAGCTTTGCCAATATGTTGA 57.273 34.783 18.30 0.00 37.53 3.18
2702 2896 8.483307 AATAAGAAAGCTTTGCCAATATGTTG 57.517 30.769 18.30 0.00 35.56 3.33
2703 2897 9.154847 GAAATAAGAAAGCTTTGCCAATATGTT 57.845 29.630 18.30 0.00 35.56 2.71
2704 2898 8.534496 AGAAATAAGAAAGCTTTGCCAATATGT 58.466 29.630 18.30 2.96 35.56 2.29
2705 2899 8.937634 AGAAATAAGAAAGCTTTGCCAATATG 57.062 30.769 18.30 0.00 35.56 1.78
2706 2900 8.200120 GGAGAAATAAGAAAGCTTTGCCAATAT 58.800 33.333 18.30 4.91 35.56 1.28
2707 2901 7.397192 AGGAGAAATAAGAAAGCTTTGCCAATA 59.603 33.333 18.30 2.70 35.56 1.90
2708 2902 6.212187 AGGAGAAATAAGAAAGCTTTGCCAAT 59.788 34.615 18.30 1.83 35.56 3.16
2709 2903 5.539955 AGGAGAAATAAGAAAGCTTTGCCAA 59.460 36.000 18.30 0.00 35.56 4.52
2710 2904 5.047802 CAGGAGAAATAAGAAAGCTTTGCCA 60.048 40.000 18.30 0.75 35.56 4.92
2711 2905 5.183904 TCAGGAGAAATAAGAAAGCTTTGCC 59.816 40.000 18.30 2.73 35.56 4.52
2712 2906 6.259550 TCAGGAGAAATAAGAAAGCTTTGC 57.740 37.500 18.30 8.41 35.56 3.68
2713 2907 9.702494 ATTTTCAGGAGAAATAAGAAAGCTTTG 57.298 29.630 18.30 0.00 42.90 2.77
2716 2910 9.746457 ACTATTTTCAGGAGAAATAAGAAAGCT 57.254 29.630 0.00 0.00 42.90 3.74
2725 2919 9.372369 CGAACTTCTACTATTTTCAGGAGAAAT 57.628 33.333 0.00 0.00 43.41 2.17
2726 2920 7.331193 GCGAACTTCTACTATTTTCAGGAGAAA 59.669 37.037 0.00 0.00 43.41 2.52
2727 2921 6.812160 GCGAACTTCTACTATTTTCAGGAGAA 59.188 38.462 0.00 0.00 42.14 2.87
2728 2922 6.071560 TGCGAACTTCTACTATTTTCAGGAGA 60.072 38.462 0.00 0.00 33.46 3.71
2729 2923 6.100004 TGCGAACTTCTACTATTTTCAGGAG 58.900 40.000 0.00 0.00 0.00 3.69
2730 2924 6.032956 TGCGAACTTCTACTATTTTCAGGA 57.967 37.500 0.00 0.00 0.00 3.86
2731 2925 6.673316 GCTTGCGAACTTCTACTATTTTCAGG 60.673 42.308 0.00 0.00 0.00 3.86
2732 2926 6.091441 AGCTTGCGAACTTCTACTATTTTCAG 59.909 38.462 0.00 0.00 0.00 3.02
2733 2927 5.932303 AGCTTGCGAACTTCTACTATTTTCA 59.068 36.000 0.00 0.00 0.00 2.69
2734 2928 6.410243 AGCTTGCGAACTTCTACTATTTTC 57.590 37.500 0.00 0.00 0.00 2.29
2735 2929 7.097834 ACTAGCTTGCGAACTTCTACTATTTT 58.902 34.615 0.00 0.00 0.00 1.82
2736 2930 6.631962 ACTAGCTTGCGAACTTCTACTATTT 58.368 36.000 0.00 0.00 0.00 1.40
2737 2931 6.210287 ACTAGCTTGCGAACTTCTACTATT 57.790 37.500 0.00 0.00 0.00 1.73
2738 2932 5.838531 ACTAGCTTGCGAACTTCTACTAT 57.161 39.130 0.00 0.00 0.00 2.12
2739 2933 5.640189 AACTAGCTTGCGAACTTCTACTA 57.360 39.130 0.00 0.00 0.00 1.82
2740 2934 4.522722 AACTAGCTTGCGAACTTCTACT 57.477 40.909 0.00 0.00 0.00 2.57
2741 2935 4.684703 TCAAACTAGCTTGCGAACTTCTAC 59.315 41.667 0.76 0.00 0.00 2.59
2742 2936 4.878439 TCAAACTAGCTTGCGAACTTCTA 58.122 39.130 0.76 0.00 0.00 2.10
2743 2937 3.728845 TCAAACTAGCTTGCGAACTTCT 58.271 40.909 0.76 0.00 0.00 2.85
2744 2938 4.152402 TGATCAAACTAGCTTGCGAACTTC 59.848 41.667 0.76 0.00 0.00 3.01
2745 2939 4.065088 TGATCAAACTAGCTTGCGAACTT 58.935 39.130 0.76 0.00 0.00 2.66
2746 2940 3.664107 TGATCAAACTAGCTTGCGAACT 58.336 40.909 0.76 0.00 0.00 3.01
2747 2941 3.181516 CCTGATCAAACTAGCTTGCGAAC 60.182 47.826 0.76 0.00 0.00 3.95
2748 2942 3.002791 CCTGATCAAACTAGCTTGCGAA 58.997 45.455 0.76 0.00 0.00 4.70
2749 2943 2.621338 CCTGATCAAACTAGCTTGCGA 58.379 47.619 0.76 0.00 0.00 5.10
2750 2944 1.667724 CCCTGATCAAACTAGCTTGCG 59.332 52.381 0.76 0.00 0.00 4.85
2751 2945 1.403323 GCCCTGATCAAACTAGCTTGC 59.597 52.381 0.76 0.00 0.00 4.01
2752 2946 2.715046 TGCCCTGATCAAACTAGCTTG 58.285 47.619 0.00 0.00 0.00 4.01
2753 2947 3.285484 CATGCCCTGATCAAACTAGCTT 58.715 45.455 0.00 0.00 0.00 3.74
2754 2948 2.240667 ACATGCCCTGATCAAACTAGCT 59.759 45.455 0.00 0.00 0.00 3.32
2755 2949 2.648059 ACATGCCCTGATCAAACTAGC 58.352 47.619 0.00 0.00 0.00 3.42
2756 2950 4.264253 TGAACATGCCCTGATCAAACTAG 58.736 43.478 0.00 0.00 34.10 2.57
2757 2951 4.299586 TGAACATGCCCTGATCAAACTA 57.700 40.909 0.00 0.00 34.10 2.24
2758 2952 3.159213 TGAACATGCCCTGATCAAACT 57.841 42.857 0.00 0.00 34.10 2.66
2759 2953 3.940209 TTGAACATGCCCTGATCAAAC 57.060 42.857 0.00 0.00 41.89 2.93
2761 2955 3.499338 ACTTTGAACATGCCCTGATCAA 58.501 40.909 0.00 5.36 42.77 2.57
2762 2956 3.159213 ACTTTGAACATGCCCTGATCA 57.841 42.857 0.00 0.00 35.11 2.92
2763 2957 4.525912 AAACTTTGAACATGCCCTGATC 57.474 40.909 0.00 0.00 0.00 2.92
2764 2958 4.961438 AAAACTTTGAACATGCCCTGAT 57.039 36.364 0.00 0.00 0.00 2.90
2765 2959 4.081198 ACAAAAACTTTGAACATGCCCTGA 60.081 37.500 6.15 0.00 0.00 3.86
2766 2960 4.190772 ACAAAAACTTTGAACATGCCCTG 58.809 39.130 6.15 0.00 0.00 4.45
2767 2961 4.486125 ACAAAAACTTTGAACATGCCCT 57.514 36.364 6.15 0.00 0.00 5.19
2768 2962 4.201901 CCAACAAAAACTTTGAACATGCCC 60.202 41.667 6.15 0.00 0.00 5.36
2769 2963 4.633565 TCCAACAAAAACTTTGAACATGCC 59.366 37.500 6.15 0.00 0.00 4.40
2770 2964 5.793026 TCCAACAAAAACTTTGAACATGC 57.207 34.783 6.15 0.00 0.00 4.06
2771 2965 9.623350 AAAATTCCAACAAAAACTTTGAACATG 57.377 25.926 6.15 0.00 0.00 3.21
2799 2993 9.959749 GTTTTTAGGTCAAAACATAGAACATGA 57.040 29.630 0.00 0.00 43.41 3.07
2800 2994 9.191995 GGTTTTTAGGTCAAAACATAGAACATG 57.808 33.333 10.36 0.00 45.00 3.21
2801 2995 8.919145 TGGTTTTTAGGTCAAAACATAGAACAT 58.081 29.630 10.36 0.00 45.00 2.71
2802 2996 8.192110 GTGGTTTTTAGGTCAAAACATAGAACA 58.808 33.333 10.36 0.00 45.00 3.18
2803 2997 7.377662 CGTGGTTTTTAGGTCAAAACATAGAAC 59.622 37.037 10.36 0.00 45.00 3.01
2804 2998 7.419204 CGTGGTTTTTAGGTCAAAACATAGAA 58.581 34.615 10.36 0.00 45.00 2.10
2805 2999 6.016943 CCGTGGTTTTTAGGTCAAAACATAGA 60.017 38.462 10.36 0.00 45.00 1.98
2806 3000 6.016943 TCCGTGGTTTTTAGGTCAAAACATAG 60.017 38.462 10.36 2.27 45.00 2.23
2807 3001 5.826737 TCCGTGGTTTTTAGGTCAAAACATA 59.173 36.000 10.36 0.00 45.00 2.29
2808 3002 4.645588 TCCGTGGTTTTTAGGTCAAAACAT 59.354 37.500 10.36 0.00 45.00 2.71
2809 3003 4.015084 TCCGTGGTTTTTAGGTCAAAACA 58.985 39.130 10.36 0.00 45.00 2.83
2810 3004 4.635833 TCCGTGGTTTTTAGGTCAAAAC 57.364 40.909 1.20 1.20 43.26 2.43
2811 3005 5.652518 CTTTCCGTGGTTTTTAGGTCAAAA 58.347 37.500 0.00 0.00 34.26 2.44
2812 3006 4.440387 GCTTTCCGTGGTTTTTAGGTCAAA 60.440 41.667 0.00 0.00 0.00 2.69
2813 3007 3.067040 GCTTTCCGTGGTTTTTAGGTCAA 59.933 43.478 0.00 0.00 0.00 3.18
2814 3008 2.619646 GCTTTCCGTGGTTTTTAGGTCA 59.380 45.455 0.00 0.00 0.00 4.02
2815 3009 2.882761 AGCTTTCCGTGGTTTTTAGGTC 59.117 45.455 0.00 0.00 0.00 3.85
2816 3010 2.621526 CAGCTTTCCGTGGTTTTTAGGT 59.378 45.455 0.00 0.00 0.00 3.08
2817 3011 2.621526 ACAGCTTTCCGTGGTTTTTAGG 59.378 45.455 0.00 0.00 0.00 2.69
2818 3012 3.066203 ACACAGCTTTCCGTGGTTTTTAG 59.934 43.478 6.83 0.00 37.45 1.85
2819 3013 3.018149 ACACAGCTTTCCGTGGTTTTTA 58.982 40.909 6.83 0.00 37.45 1.52
2820 3014 1.822371 ACACAGCTTTCCGTGGTTTTT 59.178 42.857 6.83 0.00 37.45 1.94
2821 3015 1.404035 GACACAGCTTTCCGTGGTTTT 59.596 47.619 6.83 0.00 37.45 2.43
2822 3016 1.021968 GACACAGCTTTCCGTGGTTT 58.978 50.000 6.83 0.00 37.45 3.27
2823 3017 0.180406 AGACACAGCTTTCCGTGGTT 59.820 50.000 6.83 0.00 37.45 3.67
2824 3018 0.532862 CAGACACAGCTTTCCGTGGT 60.533 55.000 6.83 0.00 37.45 4.16
2825 3019 0.249868 TCAGACACAGCTTTCCGTGG 60.250 55.000 6.83 0.00 37.45 4.94
2826 3020 1.800805 ATCAGACACAGCTTTCCGTG 58.199 50.000 0.61 0.61 39.10 4.94
2827 3021 2.146342 CAATCAGACACAGCTTTCCGT 58.854 47.619 0.00 0.00 0.00 4.69
2828 3022 1.466167 CCAATCAGACACAGCTTTCCG 59.534 52.381 0.00 0.00 0.00 4.30
2829 3023 2.485814 GACCAATCAGACACAGCTTTCC 59.514 50.000 0.00 0.00 0.00 3.13
2830 3024 3.188048 CAGACCAATCAGACACAGCTTTC 59.812 47.826 0.00 0.00 0.00 2.62
2831 3025 3.144506 CAGACCAATCAGACACAGCTTT 58.855 45.455 0.00 0.00 0.00 3.51
2832 3026 2.105477 ACAGACCAATCAGACACAGCTT 59.895 45.455 0.00 0.00 0.00 3.74
2833 3027 1.696336 ACAGACCAATCAGACACAGCT 59.304 47.619 0.00 0.00 0.00 4.24
2834 3028 2.175878 ACAGACCAATCAGACACAGC 57.824 50.000 0.00 0.00 0.00 4.40
2835 3029 3.257393 GCTACAGACCAATCAGACACAG 58.743 50.000 0.00 0.00 0.00 3.66
2836 3030 2.028112 GGCTACAGACCAATCAGACACA 60.028 50.000 0.00 0.00 0.00 3.72
2837 3031 2.028112 TGGCTACAGACCAATCAGACAC 60.028 50.000 0.00 0.00 33.12 3.67
2838 3032 2.256306 TGGCTACAGACCAATCAGACA 58.744 47.619 0.00 0.00 33.12 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.