Multiple sequence alignment - TraesCS4B01G260700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G260700 chr4B 100.000 2825 0 0 1 2825 527645400 527642576 0.000000e+00 5217.0
1 TraesCS4B01G260700 chr4B 93.489 1628 74 10 487 2112 522669331 522670928 0.000000e+00 2390.0
2 TraesCS4B01G260700 chr4B 90.621 1418 69 17 477 1880 527781288 527779921 0.000000e+00 1823.0
3 TraesCS4B01G260700 chr4B 86.340 1369 140 27 524 1870 86132137 86130794 0.000000e+00 1448.0
4 TraesCS4B01G260700 chr4B 85.410 1316 142 25 583 1870 520298277 520296984 0.000000e+00 1321.0
5 TraesCS4B01G260700 chr4B 95.420 262 6 2 1861 2122 527748243 527747988 2.030000e-111 412.0
6 TraesCS4B01G260700 chr4D 93.815 1633 62 11 487 2119 426870179 426871772 0.000000e+00 2420.0
7 TraesCS4B01G260700 chr4D 85.852 1350 139 28 547 1870 424169602 424168279 0.000000e+00 1387.0
8 TraesCS4B01G260700 chr4D 85.551 1315 139 21 586 1870 423989826 423988533 0.000000e+00 1328.0
9 TraesCS4B01G260700 chr4D 84.926 1360 143 33 547 1870 424110588 424109255 0.000000e+00 1319.0
10 TraesCS4B01G260700 chr4D 83.257 1314 171 26 586 1870 424322715 424321422 0.000000e+00 1162.0
11 TraesCS4B01G260700 chr4D 86.845 783 81 9 1101 1870 424196577 424195804 0.000000e+00 856.0
12 TraesCS4B01G260700 chr4D 87.393 349 25 6 487 835 427209032 427209361 1.590000e-102 383.0
13 TraesCS4B01G260700 chr4D 86.364 264 14 8 1874 2119 427261690 427261949 4.640000e-68 268.0
14 TraesCS4B01G260700 chr4A 93.339 1276 52 9 560 1835 38682832 38681590 0.000000e+00 1855.0
15 TraesCS4B01G260700 chr4A 84.142 1381 148 37 535 1870 40260776 40262130 0.000000e+00 1271.0
16 TraesCS4B01G260700 chr4A 79.554 269 27 17 1874 2119 37834936 37835199 1.740000e-37 167.0
17 TraesCS4B01G260700 chr4A 82.381 210 11 5 1932 2119 38681481 38681276 2.910000e-35 159.0
18 TraesCS4B01G260700 chr4A 97.619 42 1 0 1874 1915 38681576 38681535 3.900000e-09 73.1
19 TraesCS4B01G260700 chr3D 86.679 1096 89 25 319 1386 543684153 543683087 0.000000e+00 1162.0
20 TraesCS4B01G260700 chr3D 96.862 478 12 1 1 475 572164487 572164964 0.000000e+00 797.0
21 TraesCS4B01G260700 chr3D 93.416 486 31 1 2155 2639 100469999 100469514 0.000000e+00 719.0
22 TraesCS4B01G260700 chr3D 96.030 403 13 1 1 400 585103660 585104062 0.000000e+00 652.0
23 TraesCS4B01G260700 chr3D 97.778 45 1 0 82 126 572164488 572164532 8.390000e-11 78.7
24 TraesCS4B01G260700 chr3B 98.947 475 5 0 1 475 71296693 71297167 0.000000e+00 850.0
25 TraesCS4B01G260700 chr3B 93.648 488 27 3 2155 2640 179653925 179654410 0.000000e+00 726.0
26 TraesCS4B01G260700 chr3B 97.326 187 5 0 2639 2825 775534006 775533820 4.540000e-83 318.0
27 TraesCS4B01G260700 chr2A 98.947 475 5 0 1 475 758749137 758749611 0.000000e+00 850.0
28 TraesCS4B01G260700 chr2A 92.476 412 13 7 82 475 8143792 8143381 8.780000e-160 573.0
29 TraesCS4B01G260700 chr2A 96.296 54 2 0 1 54 8143793 8143740 3.880000e-14 89.8
30 TraesCS4B01G260700 chr6B 94.661 487 24 2 2155 2640 4463755 4463270 0.000000e+00 754.0
31 TraesCS4B01G260700 chr6B 94.661 487 24 2 2155 2640 4466789 4466304 0.000000e+00 754.0
32 TraesCS4B01G260700 chr6B 93.539 356 20 1 123 475 166025587 166025232 6.930000e-146 527.0
33 TraesCS4B01G260700 chr6B 97.312 186 5 0 2640 2825 64433134 64432949 1.630000e-82 316.0
34 TraesCS4B01G260700 chr6B 97.312 186 5 0 2640 2825 71260426 71260241 1.630000e-82 316.0
35 TraesCS4B01G260700 chr6B 97.312 186 5 0 2640 2825 124382127 124381942 1.630000e-82 316.0
36 TraesCS4B01G260700 chr6B 94.059 202 10 2 2624 2825 30224173 30223974 3.540000e-79 305.0
37 TraesCS4B01G260700 chr6B 96.296 54 2 0 1 54 166025644 166025591 3.880000e-14 89.8
38 TraesCS4B01G260700 chr7D 94.297 491 22 5 2153 2640 133689855 133689368 0.000000e+00 747.0
39 TraesCS4B01G260700 chr5D 97.489 438 8 1 1 435 524493667 524494104 0.000000e+00 745.0
40 TraesCS4B01G260700 chr5D 97.778 45 1 0 82 126 524493668 524493712 8.390000e-11 78.7
41 TraesCS4B01G260700 chr3A 93.927 494 20 2 1 484 30762352 30761859 0.000000e+00 737.0
42 TraesCS4B01G260700 chr2D 94.070 489 21 7 2155 2640 362290902 362291385 0.000000e+00 736.0
43 TraesCS4B01G260700 chr2D 93.456 489 31 1 2153 2640 36579724 36580212 0.000000e+00 725.0
44 TraesCS4B01G260700 chr1B 94.328 476 22 4 2153 2625 623318061 623318534 0.000000e+00 725.0
45 TraesCS4B01G260700 chr1B 97.326 187 5 0 2639 2825 138558092 138557906 4.540000e-83 318.0
46 TraesCS4B01G260700 chr5B 93.443 488 31 1 2153 2640 417602289 417601803 0.000000e+00 723.0
47 TraesCS4B01G260700 chr5B 97.312 186 5 0 2640 2825 688931810 688931995 1.630000e-82 316.0
48 TraesCS4B01G260700 chr5B 96.354 192 6 1 2635 2825 592784570 592784379 5.870000e-82 315.0
49 TraesCS4B01G260700 chr1D 96.725 397 10 1 82 475 420085311 420085707 0.000000e+00 658.0
50 TraesCS4B01G260700 chr1D 100.000 45 0 0 1 45 420085310 420085354 1.800000e-12 84.2
51 TraesCS4B01G260700 chr2B 95.897 195 7 1 2631 2825 49361883 49361690 5.870000e-82 315.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G260700 chr4B 527642576 527645400 2824 True 5217.0 5217 100.000 1 2825 1 chr4B.!!$R3 2824
1 TraesCS4B01G260700 chr4B 522669331 522670928 1597 False 2390.0 2390 93.489 487 2112 1 chr4B.!!$F1 1625
2 TraesCS4B01G260700 chr4B 527779921 527781288 1367 True 1823.0 1823 90.621 477 1880 1 chr4B.!!$R5 1403
3 TraesCS4B01G260700 chr4B 86130794 86132137 1343 True 1448.0 1448 86.340 524 1870 1 chr4B.!!$R1 1346
4 TraesCS4B01G260700 chr4B 520296984 520298277 1293 True 1321.0 1321 85.410 583 1870 1 chr4B.!!$R2 1287
5 TraesCS4B01G260700 chr4D 426870179 426871772 1593 False 2420.0 2420 93.815 487 2119 1 chr4D.!!$F1 1632
6 TraesCS4B01G260700 chr4D 424168279 424169602 1323 True 1387.0 1387 85.852 547 1870 1 chr4D.!!$R3 1323
7 TraesCS4B01G260700 chr4D 423988533 423989826 1293 True 1328.0 1328 85.551 586 1870 1 chr4D.!!$R1 1284
8 TraesCS4B01G260700 chr4D 424109255 424110588 1333 True 1319.0 1319 84.926 547 1870 1 chr4D.!!$R2 1323
9 TraesCS4B01G260700 chr4D 424321422 424322715 1293 True 1162.0 1162 83.257 586 1870 1 chr4D.!!$R5 1284
10 TraesCS4B01G260700 chr4D 424195804 424196577 773 True 856.0 856 86.845 1101 1870 1 chr4D.!!$R4 769
11 TraesCS4B01G260700 chr4A 40260776 40262130 1354 False 1271.0 1271 84.142 535 1870 1 chr4A.!!$F2 1335
12 TraesCS4B01G260700 chr4A 38681276 38682832 1556 True 695.7 1855 91.113 560 2119 3 chr4A.!!$R1 1559
13 TraesCS4B01G260700 chr3D 543683087 543684153 1066 True 1162.0 1162 86.679 319 1386 1 chr3D.!!$R2 1067
14 TraesCS4B01G260700 chr6B 4463270 4466789 3519 True 754.0 754 94.661 2155 2640 2 chr6B.!!$R5 485

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
88 89 0.032952 TTGACACCGTCCTGCAGTAC 59.967 55.0 13.81 6.1 0.0 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1942 2098 1.324736 CGGCGATCAACTTCTACTTGC 59.675 52.381 0.0 0.0 0.0 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 6.748333 CTGATTAGCAATCTGAAACTGGAA 57.252 37.500 9.34 0.00 38.64 3.53
36 37 6.748333 TGATTAGCAATCTGAAACTGGAAG 57.252 37.500 9.34 0.00 38.72 3.46
37 38 5.124457 TGATTAGCAATCTGAAACTGGAAGC 59.876 40.000 9.34 0.00 36.66 3.86
38 39 1.808945 AGCAATCTGAAACTGGAAGCG 59.191 47.619 0.00 0.00 37.60 4.68
39 40 1.730446 GCAATCTGAAACTGGAAGCGC 60.730 52.381 0.00 0.00 37.60 5.92
40 41 1.135575 CAATCTGAAACTGGAAGCGCC 60.136 52.381 2.29 0.00 37.60 6.53
41 42 1.021390 ATCTGAAACTGGAAGCGCCG 61.021 55.000 2.29 0.00 40.66 6.46
42 43 1.667830 CTGAAACTGGAAGCGCCGA 60.668 57.895 2.29 0.00 40.66 5.54
43 44 1.003839 TGAAACTGGAAGCGCCGAT 60.004 52.632 2.29 0.00 40.66 4.18
44 45 1.298157 TGAAACTGGAAGCGCCGATG 61.298 55.000 2.29 0.00 40.66 3.84
45 46 2.583685 GAAACTGGAAGCGCCGATGC 62.584 60.000 2.29 0.00 40.66 3.91
46 47 3.899981 AACTGGAAGCGCCGATGCA 62.900 57.895 2.29 0.95 40.66 3.96
47 48 3.869272 CTGGAAGCGCCGATGCAC 61.869 66.667 2.29 0.00 40.66 4.57
48 49 4.695993 TGGAAGCGCCGATGCACA 62.696 61.111 2.29 0.00 40.66 4.57
49 50 3.204827 GGAAGCGCCGATGCACAT 61.205 61.111 2.29 0.00 37.32 3.21
50 51 1.887242 GGAAGCGCCGATGCACATA 60.887 57.895 2.29 0.00 37.32 2.29
51 52 1.276844 GAAGCGCCGATGCACATAC 59.723 57.895 2.29 0.00 37.32 2.39
52 53 2.105960 GAAGCGCCGATGCACATACC 62.106 60.000 2.29 0.00 37.32 2.73
53 54 2.588877 GCGCCGATGCACATACCT 60.589 61.111 0.00 0.00 37.32 3.08
54 55 2.598632 GCGCCGATGCACATACCTC 61.599 63.158 0.00 0.00 37.32 3.85
55 56 1.068083 CGCCGATGCACATACCTCT 59.932 57.895 0.00 0.00 37.32 3.69
56 57 0.530650 CGCCGATGCACATACCTCTT 60.531 55.000 0.00 0.00 37.32 2.85
57 58 0.940126 GCCGATGCACATACCTCTTG 59.060 55.000 0.00 0.00 37.47 3.02
58 59 1.473257 GCCGATGCACATACCTCTTGA 60.473 52.381 0.00 0.00 37.47 3.02
59 60 2.905075 CCGATGCACATACCTCTTGAA 58.095 47.619 0.00 0.00 0.00 2.69
60 61 3.270027 CCGATGCACATACCTCTTGAAA 58.730 45.455 0.00 0.00 0.00 2.69
61 62 3.310774 CCGATGCACATACCTCTTGAAAG 59.689 47.826 0.00 0.00 0.00 2.62
62 63 3.242543 CGATGCACATACCTCTTGAAAGC 60.243 47.826 0.00 0.00 0.00 3.51
63 64 3.138884 TGCACATACCTCTTGAAAGCA 57.861 42.857 0.00 0.00 0.00 3.91
64 65 2.813754 TGCACATACCTCTTGAAAGCAC 59.186 45.455 0.00 0.00 0.00 4.40
65 66 2.162408 GCACATACCTCTTGAAAGCACC 59.838 50.000 0.00 0.00 0.00 5.01
66 67 3.679389 CACATACCTCTTGAAAGCACCT 58.321 45.455 0.00 0.00 0.00 4.00
67 68 4.832248 CACATACCTCTTGAAAGCACCTA 58.168 43.478 0.00 0.00 0.00 3.08
68 69 4.631813 CACATACCTCTTGAAAGCACCTAC 59.368 45.833 0.00 0.00 0.00 3.18
69 70 4.532521 ACATACCTCTTGAAAGCACCTACT 59.467 41.667 0.00 0.00 0.00 2.57
70 71 5.013183 ACATACCTCTTGAAAGCACCTACTT 59.987 40.000 0.00 0.00 0.00 2.24
71 72 3.744660 ACCTCTTGAAAGCACCTACTTG 58.255 45.455 0.00 0.00 0.00 3.16
72 73 3.391296 ACCTCTTGAAAGCACCTACTTGA 59.609 43.478 0.00 0.00 0.00 3.02
73 74 3.748568 CCTCTTGAAAGCACCTACTTGAC 59.251 47.826 0.00 0.00 0.00 3.18
74 75 4.380531 CTCTTGAAAGCACCTACTTGACA 58.619 43.478 0.00 0.00 0.00 3.58
75 76 4.127171 TCTTGAAAGCACCTACTTGACAC 58.873 43.478 0.00 0.00 0.00 3.67
76 77 2.846193 TGAAAGCACCTACTTGACACC 58.154 47.619 0.00 0.00 0.00 4.16
77 78 1.798813 GAAAGCACCTACTTGACACCG 59.201 52.381 0.00 0.00 0.00 4.94
78 79 0.756903 AAGCACCTACTTGACACCGT 59.243 50.000 0.00 0.00 0.00 4.83
79 80 0.317479 AGCACCTACTTGACACCGTC 59.683 55.000 0.00 0.00 0.00 4.79
80 81 0.669625 GCACCTACTTGACACCGTCC 60.670 60.000 0.00 0.00 0.00 4.79
81 82 0.966920 CACCTACTTGACACCGTCCT 59.033 55.000 0.00 0.00 0.00 3.85
82 83 0.966920 ACCTACTTGACACCGTCCTG 59.033 55.000 0.00 0.00 0.00 3.86
83 84 0.389948 CCTACTTGACACCGTCCTGC 60.390 60.000 0.00 0.00 0.00 4.85
84 85 0.317160 CTACTTGACACCGTCCTGCA 59.683 55.000 0.00 0.00 0.00 4.41
85 86 0.317160 TACTTGACACCGTCCTGCAG 59.683 55.000 6.78 6.78 0.00 4.41
86 87 1.069765 CTTGACACCGTCCTGCAGT 59.930 57.895 13.81 0.00 0.00 4.40
87 88 0.317160 CTTGACACCGTCCTGCAGTA 59.683 55.000 13.81 0.00 0.00 2.74
88 89 0.032952 TTGACACCGTCCTGCAGTAC 59.967 55.000 13.81 6.10 0.00 2.73
89 90 1.110518 TGACACCGTCCTGCAGTACA 61.111 55.000 13.81 0.00 0.00 2.90
90 91 0.032952 GACACCGTCCTGCAGTACAA 59.967 55.000 13.81 0.00 0.00 2.41
91 92 0.033504 ACACCGTCCTGCAGTACAAG 59.966 55.000 13.81 3.91 0.00 3.16
92 93 1.004918 ACCGTCCTGCAGTACAAGC 60.005 57.895 13.81 0.00 0.00 4.01
93 94 1.293498 CCGTCCTGCAGTACAAGCT 59.707 57.895 13.81 0.00 0.00 3.74
94 95 1.016130 CCGTCCTGCAGTACAAGCTG 61.016 60.000 13.81 10.10 39.37 4.24
95 96 0.038251 CGTCCTGCAGTACAAGCTGA 60.038 55.000 13.81 0.00 38.70 4.26
96 97 1.404717 CGTCCTGCAGTACAAGCTGAT 60.405 52.381 13.81 0.00 38.70 2.90
97 98 2.704572 GTCCTGCAGTACAAGCTGATT 58.295 47.619 13.81 0.00 38.70 2.57
98 99 3.676049 CGTCCTGCAGTACAAGCTGATTA 60.676 47.826 13.81 2.50 38.70 1.75
99 100 3.868077 GTCCTGCAGTACAAGCTGATTAG 59.132 47.826 13.81 4.05 38.70 1.73
116 117 7.192148 CTGATTAGCAATCTGAATCTGGAAG 57.808 40.000 9.34 0.00 38.64 3.46
117 118 5.530171 TGATTAGCAATCTGAATCTGGAAGC 59.470 40.000 9.34 0.00 38.72 3.86
118 119 2.286872 AGCAATCTGAATCTGGAAGCG 58.713 47.619 0.00 0.00 0.00 4.68
119 120 1.268437 GCAATCTGAATCTGGAAGCGC 60.268 52.381 0.00 0.00 0.00 5.92
120 121 1.332997 CAATCTGAATCTGGAAGCGCC 59.667 52.381 2.29 0.00 37.10 6.53
121 122 0.531532 ATCTGAATCTGGAAGCGCCG 60.532 55.000 2.29 0.00 40.66 6.46
122 123 1.153568 CTGAATCTGGAAGCGCCGA 60.154 57.895 2.29 0.00 40.66 5.54
123 124 0.531532 CTGAATCTGGAAGCGCCGAT 60.532 55.000 2.29 0.00 40.66 4.18
124 125 0.811219 TGAATCTGGAAGCGCCGATG 60.811 55.000 2.29 0.00 40.66 3.84
125 126 0.811616 GAATCTGGAAGCGCCGATGT 60.812 55.000 2.29 0.00 40.66 3.06
126 127 1.091771 AATCTGGAAGCGCCGATGTG 61.092 55.000 2.29 0.00 40.66 3.21
135 136 2.183300 GCCGATGTGCTGACGGTA 59.817 61.111 0.00 0.00 46.95 4.02
136 137 1.447140 GCCGATGTGCTGACGGTAA 60.447 57.895 0.00 0.00 46.95 2.85
137 138 1.693083 GCCGATGTGCTGACGGTAAC 61.693 60.000 0.00 0.00 46.95 2.50
165 166 4.821589 GGCGGCGGAGTTCTCCAG 62.822 72.222 17.48 11.48 0.00 3.86
166 167 4.821589 GCGGCGGAGTTCTCCAGG 62.822 72.222 17.48 7.74 0.00 4.45
167 168 3.068691 CGGCGGAGTTCTCCAGGA 61.069 66.667 17.48 0.00 0.00 3.86
168 169 2.579738 GGCGGAGTTCTCCAGGAC 59.420 66.667 17.48 2.26 0.00 3.85
169 170 2.182030 GCGGAGTTCTCCAGGACG 59.818 66.667 17.48 5.59 0.00 4.79
170 171 2.341101 GCGGAGTTCTCCAGGACGA 61.341 63.158 17.48 0.00 0.00 4.20
171 172 1.803943 CGGAGTTCTCCAGGACGAG 59.196 63.158 17.48 0.00 0.00 4.18
172 173 1.513622 GGAGTTCTCCAGGACGAGC 59.486 63.158 13.31 0.00 0.00 5.03
173 174 0.968393 GGAGTTCTCCAGGACGAGCT 60.968 60.000 13.31 5.37 0.00 4.09
174 175 0.892063 GAGTTCTCCAGGACGAGCTT 59.108 55.000 6.69 0.00 0.00 3.74
175 176 0.605589 AGTTCTCCAGGACGAGCTTG 59.394 55.000 0.00 0.00 0.00 4.01
176 177 0.603569 GTTCTCCAGGACGAGCTTGA 59.396 55.000 8.31 0.00 0.00 3.02
177 178 1.205893 GTTCTCCAGGACGAGCTTGAT 59.794 52.381 8.31 0.00 0.00 2.57
178 179 0.820226 TCTCCAGGACGAGCTTGATG 59.180 55.000 8.31 3.41 0.00 3.07
179 180 0.534412 CTCCAGGACGAGCTTGATGT 59.466 55.000 8.31 0.00 0.00 3.06
180 181 0.976641 TCCAGGACGAGCTTGATGTT 59.023 50.000 8.31 0.00 0.00 2.71
181 182 1.081892 CCAGGACGAGCTTGATGTTG 58.918 55.000 8.31 0.61 0.00 3.33
182 183 1.081892 CAGGACGAGCTTGATGTTGG 58.918 55.000 8.31 0.00 0.00 3.77
183 184 0.674895 AGGACGAGCTTGATGTTGGC 60.675 55.000 8.31 0.00 0.00 4.52
184 185 0.955428 GGACGAGCTTGATGTTGGCA 60.955 55.000 8.31 0.00 0.00 4.92
185 186 0.445436 GACGAGCTTGATGTTGGCAG 59.555 55.000 8.31 0.00 0.00 4.85
186 187 0.035317 ACGAGCTTGATGTTGGCAGA 59.965 50.000 8.31 0.00 0.00 4.26
187 188 0.725686 CGAGCTTGATGTTGGCAGAG 59.274 55.000 0.00 0.00 0.00 3.35
188 189 1.673923 CGAGCTTGATGTTGGCAGAGA 60.674 52.381 0.00 0.00 0.00 3.10
189 190 2.641305 GAGCTTGATGTTGGCAGAGAT 58.359 47.619 0.00 0.00 0.00 2.75
190 191 2.355132 GAGCTTGATGTTGGCAGAGATG 59.645 50.000 0.00 0.00 0.00 2.90
191 192 1.202268 GCTTGATGTTGGCAGAGATGC 60.202 52.381 0.00 0.00 0.00 3.91
192 193 2.366533 CTTGATGTTGGCAGAGATGCT 58.633 47.619 0.00 0.00 34.73 3.79
193 194 3.538591 CTTGATGTTGGCAGAGATGCTA 58.461 45.455 0.00 0.00 34.73 3.49
194 195 2.910199 TGATGTTGGCAGAGATGCTAC 58.090 47.619 0.00 0.49 34.73 3.58
195 196 2.216898 GATGTTGGCAGAGATGCTACC 58.783 52.381 0.00 0.00 34.73 3.18
196 197 0.983467 TGTTGGCAGAGATGCTACCA 59.017 50.000 0.00 0.00 38.30 3.25
197 198 1.561076 TGTTGGCAGAGATGCTACCAT 59.439 47.619 0.00 0.00 39.79 3.55
198 199 2.771372 TGTTGGCAGAGATGCTACCATA 59.229 45.455 0.00 0.00 39.79 2.74
199 200 3.181462 TGTTGGCAGAGATGCTACCATAG 60.181 47.826 0.00 0.00 39.79 2.23
200 201 2.962859 TGGCAGAGATGCTACCATAGA 58.037 47.619 0.00 0.00 35.03 1.98
201 202 3.514539 TGGCAGAGATGCTACCATAGAT 58.485 45.455 0.00 0.00 35.03 1.98
202 203 3.260128 TGGCAGAGATGCTACCATAGATG 59.740 47.826 0.00 0.00 35.03 2.90
203 204 3.513119 GGCAGAGATGCTACCATAGATGA 59.487 47.826 0.00 0.00 29.70 2.92
204 205 4.020751 GGCAGAGATGCTACCATAGATGAA 60.021 45.833 0.00 0.00 29.70 2.57
205 206 4.928615 GCAGAGATGCTACCATAGATGAAC 59.071 45.833 0.00 0.00 0.00 3.18
206 207 5.279406 GCAGAGATGCTACCATAGATGAACT 60.279 44.000 0.00 0.00 0.00 3.01
207 208 6.157904 CAGAGATGCTACCATAGATGAACTG 58.842 44.000 0.00 0.00 0.00 3.16
208 209 4.892433 AGATGCTACCATAGATGAACTGC 58.108 43.478 0.00 0.00 0.00 4.40
209 210 3.475566 TGCTACCATAGATGAACTGCC 57.524 47.619 0.00 0.00 0.00 4.85
210 211 3.041211 TGCTACCATAGATGAACTGCCT 58.959 45.455 0.00 0.00 0.00 4.75
211 212 3.070159 TGCTACCATAGATGAACTGCCTC 59.930 47.826 0.00 0.00 0.00 4.70
212 213 3.323403 GCTACCATAGATGAACTGCCTCT 59.677 47.826 0.00 0.00 0.00 3.69
213 214 4.202305 GCTACCATAGATGAACTGCCTCTT 60.202 45.833 0.00 0.00 0.00 2.85
214 215 4.414337 ACCATAGATGAACTGCCTCTTC 57.586 45.455 0.00 0.00 0.00 2.87
215 216 3.181471 ACCATAGATGAACTGCCTCTTCG 60.181 47.826 0.00 0.00 0.00 3.79
216 217 3.181471 CCATAGATGAACTGCCTCTTCGT 60.181 47.826 0.00 0.00 0.00 3.85
217 218 2.376808 AGATGAACTGCCTCTTCGTG 57.623 50.000 0.00 0.00 0.00 4.35
218 219 1.620819 AGATGAACTGCCTCTTCGTGT 59.379 47.619 0.00 0.00 0.00 4.49
219 220 1.728971 GATGAACTGCCTCTTCGTGTG 59.271 52.381 0.00 0.00 0.00 3.82
220 221 0.880278 TGAACTGCCTCTTCGTGTGC 60.880 55.000 0.00 0.00 0.00 4.57
221 222 0.880278 GAACTGCCTCTTCGTGTGCA 60.880 55.000 0.00 0.00 0.00 4.57
222 223 3.559024 CTGCCTCTTCGTGTGCAG 58.441 61.111 0.00 0.00 44.43 4.41
223 224 2.666190 TGCCTCTTCGTGTGCAGC 60.666 61.111 0.00 0.00 0.00 5.25
224 225 2.666190 GCCTCTTCGTGTGCAGCA 60.666 61.111 0.00 0.00 0.00 4.41
225 226 2.253758 GCCTCTTCGTGTGCAGCAA 61.254 57.895 0.00 0.00 0.00 3.91
226 227 1.864862 CCTCTTCGTGTGCAGCAAG 59.135 57.895 0.00 0.00 0.00 4.01
227 228 1.206072 CTCTTCGTGTGCAGCAAGC 59.794 57.895 0.00 0.00 45.96 4.01
239 240 2.266055 GCAAGCAGCCGGAGTAGT 59.734 61.111 5.05 0.00 37.23 2.73
240 241 1.376037 GCAAGCAGCCGGAGTAGTT 60.376 57.895 5.05 0.00 37.23 2.24
241 242 1.639298 GCAAGCAGCCGGAGTAGTTG 61.639 60.000 5.05 2.33 37.23 3.16
242 243 0.037326 CAAGCAGCCGGAGTAGTTGA 60.037 55.000 5.05 0.00 0.00 3.18
243 244 0.905357 AAGCAGCCGGAGTAGTTGAT 59.095 50.000 5.05 0.00 0.00 2.57
244 245 0.461961 AGCAGCCGGAGTAGTTGATC 59.538 55.000 5.05 0.00 0.00 2.92
245 246 0.461961 GCAGCCGGAGTAGTTGATCT 59.538 55.000 5.05 0.00 0.00 2.75
246 247 1.134670 GCAGCCGGAGTAGTTGATCTT 60.135 52.381 5.05 0.00 0.00 2.40
247 248 2.678190 GCAGCCGGAGTAGTTGATCTTT 60.678 50.000 5.05 0.00 0.00 2.52
248 249 3.430374 GCAGCCGGAGTAGTTGATCTTTA 60.430 47.826 5.05 0.00 0.00 1.85
249 250 4.363999 CAGCCGGAGTAGTTGATCTTTAG 58.636 47.826 5.05 0.00 0.00 1.85
250 251 3.385111 AGCCGGAGTAGTTGATCTTTAGG 59.615 47.826 5.05 0.00 0.00 2.69
251 252 3.383825 GCCGGAGTAGTTGATCTTTAGGA 59.616 47.826 5.05 0.00 0.00 2.94
252 253 4.737055 GCCGGAGTAGTTGATCTTTAGGAC 60.737 50.000 5.05 0.00 0.00 3.85
253 254 4.401519 CCGGAGTAGTTGATCTTTAGGACA 59.598 45.833 0.00 0.00 0.00 4.02
254 255 5.450688 CCGGAGTAGTTGATCTTTAGGACAG 60.451 48.000 0.00 0.00 0.00 3.51
255 256 5.450688 CGGAGTAGTTGATCTTTAGGACAGG 60.451 48.000 0.00 0.00 0.00 4.00
256 257 5.163395 GGAGTAGTTGATCTTTAGGACAGGG 60.163 48.000 0.00 0.00 0.00 4.45
257 258 3.636153 AGTTGATCTTTAGGACAGGGC 57.364 47.619 0.00 0.00 0.00 5.19
258 259 2.912956 AGTTGATCTTTAGGACAGGGCA 59.087 45.455 0.00 0.00 0.00 5.36
259 260 3.010420 GTTGATCTTTAGGACAGGGCAC 58.990 50.000 0.00 0.00 0.00 5.01
260 261 1.207089 TGATCTTTAGGACAGGGCACG 59.793 52.381 0.00 0.00 0.00 5.34
261 262 1.480954 GATCTTTAGGACAGGGCACGA 59.519 52.381 0.00 0.00 0.00 4.35
262 263 0.606604 TCTTTAGGACAGGGCACGAC 59.393 55.000 0.00 0.00 0.00 4.34
263 264 0.736325 CTTTAGGACAGGGCACGACG 60.736 60.000 0.00 0.00 0.00 5.12
264 265 1.180456 TTTAGGACAGGGCACGACGA 61.180 55.000 0.00 0.00 0.00 4.20
265 266 1.870055 TTAGGACAGGGCACGACGAC 61.870 60.000 0.00 0.00 0.00 4.34
267 268 4.034258 GACAGGGCACGACGACGA 62.034 66.667 15.32 0.00 42.66 4.20
268 269 3.547249 GACAGGGCACGACGACGAA 62.547 63.158 15.32 0.00 42.66 3.85
269 270 3.103911 CAGGGCACGACGACGAAC 61.104 66.667 15.32 5.05 42.66 3.95
273 274 4.390584 GCACGACGACGAACGCAC 62.391 66.667 15.32 0.00 46.94 5.34
274 275 4.087079 CACGACGACGAACGCACG 62.087 66.667 15.32 17.37 46.94 5.34
296 297 4.671549 CGCAAGGCACACACGCAG 62.672 66.667 0.00 0.00 0.00 5.18
297 298 4.988486 GCAAGGCACACACGCAGC 62.988 66.667 0.00 0.00 0.00 5.25
298 299 3.282157 CAAGGCACACACGCAGCT 61.282 61.111 0.00 0.00 0.00 4.24
299 300 2.974698 AAGGCACACACGCAGCTC 60.975 61.111 0.00 0.00 0.00 4.09
300 301 3.755526 AAGGCACACACGCAGCTCA 62.756 57.895 0.00 0.00 0.00 4.26
301 302 4.017877 GGCACACACGCAGCTCAC 62.018 66.667 0.00 0.00 0.00 3.51
302 303 4.360027 GCACACACGCAGCTCACG 62.360 66.667 4.17 4.17 0.00 4.35
303 304 2.961721 CACACACGCAGCTCACGT 60.962 61.111 5.50 5.50 46.42 4.49
304 305 2.202878 ACACACGCAGCTCACGTT 60.203 55.556 8.53 0.00 42.96 3.99
305 306 2.237751 ACACACGCAGCTCACGTTC 61.238 57.895 8.53 0.00 42.96 3.95
306 307 2.661866 ACACGCAGCTCACGTTCC 60.662 61.111 8.53 0.00 42.96 3.62
307 308 3.414700 CACGCAGCTCACGTTCCC 61.415 66.667 8.53 0.00 42.96 3.97
308 309 4.681978 ACGCAGCTCACGTTCCCC 62.682 66.667 5.50 0.00 41.93 4.81
310 311 4.021925 GCAGCTCACGTTCCCCCT 62.022 66.667 0.00 0.00 0.00 4.79
311 312 2.266055 CAGCTCACGTTCCCCCTC 59.734 66.667 0.00 0.00 0.00 4.30
312 313 3.003763 AGCTCACGTTCCCCCTCC 61.004 66.667 0.00 0.00 0.00 4.30
313 314 3.319198 GCTCACGTTCCCCCTCCA 61.319 66.667 0.00 0.00 0.00 3.86
314 315 2.670148 GCTCACGTTCCCCCTCCAT 61.670 63.158 0.00 0.00 0.00 3.41
315 316 1.522569 CTCACGTTCCCCCTCCATC 59.477 63.158 0.00 0.00 0.00 3.51
316 317 2.186903 CACGTTCCCCCTCCATCG 59.813 66.667 0.00 0.00 0.00 3.84
317 318 3.782443 ACGTTCCCCCTCCATCGC 61.782 66.667 0.00 0.00 0.00 4.58
318 319 3.470888 CGTTCCCCCTCCATCGCT 61.471 66.667 0.00 0.00 0.00 4.93
319 320 2.506472 GTTCCCCCTCCATCGCTC 59.494 66.667 0.00 0.00 0.00 5.03
320 321 3.154473 TTCCCCCTCCATCGCTCG 61.154 66.667 0.00 0.00 0.00 5.03
323 324 3.917760 CCCCTCCATCGCTCGGTC 61.918 72.222 0.00 0.00 0.00 4.79
324 325 3.917760 CCCTCCATCGCTCGGTCC 61.918 72.222 0.00 0.00 0.00 4.46
330 331 4.816984 ATCGCTCGGTCCCTCGGT 62.817 66.667 0.00 0.00 0.00 4.69
346 347 1.976112 GGTCCTGACCGAGCTTTCT 59.024 57.895 0.00 0.00 42.29 2.52
349 350 0.251832 TCCTGACCGAGCTTTCTCCT 60.252 55.000 0.00 0.00 35.94 3.69
350 351 0.174617 CCTGACCGAGCTTTCTCCTC 59.825 60.000 0.00 0.00 35.94 3.71
371 372 2.666098 CGGTCCGGTCCAGGGAAAT 61.666 63.158 18.17 0.00 34.80 2.17
372 373 1.332144 CGGTCCGGTCCAGGGAAATA 61.332 60.000 18.17 0.00 34.80 1.40
373 374 0.468648 GGTCCGGTCCAGGGAAATAG 59.531 60.000 13.32 0.00 34.80 1.73
376 377 1.148498 CGGTCCAGGGAAATAGGCC 59.852 63.158 0.00 0.00 0.00 5.19
439 440 3.936203 TCCAAAGCACGGCTCGGT 61.936 61.111 11.47 0.00 38.25 4.69
441 442 2.664851 CAAAGCACGGCTCGGTCA 60.665 61.111 0.00 0.00 38.25 4.02
505 527 1.444553 GTCGATCGATCCATCCGCC 60.445 63.158 22.50 0.53 0.00 6.13
515 537 4.838152 CATCCGCCCGTCACCCAG 62.838 72.222 0.00 0.00 0.00 4.45
522 544 2.928396 CCGTCACCCAGTTCCCCT 60.928 66.667 0.00 0.00 0.00 4.79
1895 2051 6.864165 GGAGTAAATGCTAGGATAAACTCTCG 59.136 42.308 25.09 0.00 34.09 4.04
1896 2052 7.349412 AGTAAATGCTAGGATAAACTCTCGT 57.651 36.000 0.00 0.00 0.00 4.18
1942 2098 0.110678 AGCCATCCATGAGCCATCAG 59.889 55.000 0.00 0.00 39.29 2.90
1943 2099 1.524863 GCCATCCATGAGCCATCAGC 61.525 60.000 0.00 0.00 39.29 4.26
1996 2152 1.408702 TGTTGGCCTGCTTTTCTGAAC 59.591 47.619 3.32 0.00 0.00 3.18
2025 2200 4.024556 GTGCCATTATGCAGAGATGTGTAC 60.025 45.833 0.00 0.00 43.02 2.90
2101 2280 8.311109 TGCTCAGTTGTTATTGAGTTATAGTGA 58.689 33.333 3.74 0.00 42.17 3.41
2113 2292 7.920160 TGAGTTATAGTGATCAATTTGTGCA 57.080 32.000 0.00 0.00 0.00 4.57
2123 2302 8.723311 AGTGATCAATTTGTGCATTTTTATTGG 58.277 29.630 0.00 0.00 0.00 3.16
2124 2303 8.719648 GTGATCAATTTGTGCATTTTTATTGGA 58.280 29.630 0.00 0.00 0.00 3.53
2125 2304 8.719648 TGATCAATTTGTGCATTTTTATTGGAC 58.280 29.630 0.00 0.00 36.14 4.02
2126 2305 7.114882 TCAATTTGTGCATTTTTATTGGACG 57.885 32.000 0.00 0.00 38.16 4.79
2127 2306 4.981389 TTTGTGCATTTTTATTGGACGC 57.019 36.364 0.00 0.00 38.16 5.19
2128 2307 2.953020 TGTGCATTTTTATTGGACGCC 58.047 42.857 0.00 0.00 38.16 5.68
2129 2308 2.267426 GTGCATTTTTATTGGACGCCC 58.733 47.619 0.00 0.00 0.00 6.13
2130 2309 1.895798 TGCATTTTTATTGGACGCCCA 59.104 42.857 0.00 0.00 41.64 5.36
2131 2310 2.499289 TGCATTTTTATTGGACGCCCAT 59.501 40.909 0.00 0.00 43.12 4.00
2132 2311 3.701542 TGCATTTTTATTGGACGCCCATA 59.298 39.130 0.00 0.00 43.12 2.74
2133 2312 4.160439 TGCATTTTTATTGGACGCCCATAA 59.840 37.500 0.00 0.00 43.12 1.90
2134 2313 4.506288 GCATTTTTATTGGACGCCCATAAC 59.494 41.667 0.00 0.00 43.12 1.89
2135 2314 4.358494 TTTTTATTGGACGCCCATAACG 57.642 40.909 0.00 0.00 43.12 3.18
2136 2315 1.956297 TTATTGGACGCCCATAACGG 58.044 50.000 0.00 0.00 43.12 4.44
2137 2316 0.533308 TATTGGACGCCCATAACGGC 60.533 55.000 0.00 0.00 43.12 5.68
2140 2319 3.199891 GACGCCCATAACGGCCAC 61.200 66.667 2.24 0.00 46.98 5.01
2141 2320 3.961838 GACGCCCATAACGGCCACA 62.962 63.158 2.24 0.00 46.98 4.17
2142 2321 3.505184 CGCCCATAACGGCCACAC 61.505 66.667 2.24 0.00 46.98 3.82
2143 2322 3.505184 GCCCATAACGGCCACACG 61.505 66.667 2.24 0.00 43.66 4.49
2169 2348 2.482142 GGCGTTAGAGCAACTCTAGCAT 60.482 50.000 15.73 0.00 42.92 3.79
2182 2361 3.214328 CTCTAGCATACCCCGCAAAAAT 58.786 45.455 0.00 0.00 0.00 1.82
2199 2378 0.952010 AATACGACCCGCAAAACGCT 60.952 50.000 0.00 0.00 41.76 5.07
2219 2398 2.990066 TTTGCGGGTTCACCAAAATT 57.010 40.000 0.00 0.00 40.22 1.82
2233 2412 2.939103 CCAAAATTGTTTTTGCGGGTCA 59.061 40.909 5.81 0.00 46.77 4.02
2269 2448 3.546670 CCGAGCAGAACACGTATCTAAAC 59.453 47.826 3.00 0.00 0.00 2.01
2352 2532 8.712363 CATACTACATTGTTCATGGCATACTAC 58.288 37.037 0.00 0.00 37.17 2.73
2426 5639 0.861155 ACTAGGGGGTCGGATCTGAT 59.139 55.000 7.68 0.00 0.00 2.90
2439 5652 4.147449 CTGATGGCGGCGAGGTCA 62.147 66.667 12.98 9.73 0.00 4.02
2458 5671 4.980805 GGCAACTGGACGACGCCA 62.981 66.667 10.00 10.00 42.50 5.69
2602 5815 3.644606 CCTGCTGCCACTGGAGGT 61.645 66.667 0.00 0.00 36.49 3.85
2641 5854 4.828925 GCTGGCGCTCCTCCTCAC 62.829 72.222 7.64 0.00 0.00 3.51
2642 5855 3.073735 CTGGCGCTCCTCCTCACT 61.074 66.667 7.64 0.00 0.00 3.41
2643 5856 1.754621 CTGGCGCTCCTCCTCACTA 60.755 63.158 7.64 0.00 0.00 2.74
2644 5857 1.733402 CTGGCGCTCCTCCTCACTAG 61.733 65.000 7.64 0.00 0.00 2.57
2645 5858 1.755008 GGCGCTCCTCCTCACTAGT 60.755 63.158 7.64 0.00 0.00 2.57
2646 5859 0.465824 GGCGCTCCTCCTCACTAGTA 60.466 60.000 7.64 0.00 0.00 1.82
2647 5860 0.948678 GCGCTCCTCCTCACTAGTAG 59.051 60.000 0.00 0.00 0.00 2.57
2648 5861 1.475392 GCGCTCCTCCTCACTAGTAGA 60.475 57.143 3.59 0.00 0.00 2.59
2649 5862 2.920524 CGCTCCTCCTCACTAGTAGAA 58.079 52.381 3.59 0.00 0.00 2.10
2650 5863 3.280295 CGCTCCTCCTCACTAGTAGAAA 58.720 50.000 3.59 0.00 0.00 2.52
2651 5864 3.695060 CGCTCCTCCTCACTAGTAGAAAA 59.305 47.826 3.59 0.00 0.00 2.29
2652 5865 4.201970 CGCTCCTCCTCACTAGTAGAAAAG 60.202 50.000 3.59 0.00 0.00 2.27
2653 5866 4.098807 GCTCCTCCTCACTAGTAGAAAAGG 59.901 50.000 3.59 7.43 0.00 3.11
2654 5867 4.611367 TCCTCCTCACTAGTAGAAAAGGG 58.389 47.826 3.59 0.00 0.00 3.95
2655 5868 3.707102 CCTCCTCACTAGTAGAAAAGGGG 59.293 52.174 3.59 7.09 0.00 4.79
2656 5869 3.707102 CTCCTCACTAGTAGAAAAGGGGG 59.293 52.174 3.59 0.00 0.00 5.40
2657 5870 2.170817 CCTCACTAGTAGAAAAGGGGGC 59.829 54.545 3.59 0.00 0.00 5.80
2658 5871 2.838202 CTCACTAGTAGAAAAGGGGGCA 59.162 50.000 3.59 0.00 0.00 5.36
2659 5872 3.253220 TCACTAGTAGAAAAGGGGGCAA 58.747 45.455 3.59 0.00 0.00 4.52
2660 5873 3.850173 TCACTAGTAGAAAAGGGGGCAAT 59.150 43.478 3.59 0.00 0.00 3.56
2661 5874 3.947834 CACTAGTAGAAAAGGGGGCAATG 59.052 47.826 3.59 0.00 0.00 2.82
2662 5875 2.532250 AGTAGAAAAGGGGGCAATGG 57.468 50.000 0.00 0.00 0.00 3.16
2663 5876 1.716503 AGTAGAAAAGGGGGCAATGGT 59.283 47.619 0.00 0.00 0.00 3.55
2664 5877 2.100197 GTAGAAAAGGGGGCAATGGTC 58.900 52.381 0.00 0.00 0.00 4.02
2665 5878 0.252239 AGAAAAGGGGGCAATGGTCC 60.252 55.000 0.00 0.00 38.40 4.46
2666 5879 0.544120 GAAAAGGGGGCAATGGTCCA 60.544 55.000 0.00 0.00 42.08 4.02
2667 5880 0.545071 AAAAGGGGGCAATGGTCCAG 60.545 55.000 0.00 0.00 42.08 3.86
2668 5881 2.460476 AAAGGGGGCAATGGTCCAGG 62.460 60.000 0.00 0.00 42.08 4.45
2672 5885 2.757099 GGCAATGGTCCAGGCCAG 60.757 66.667 25.31 0.00 45.70 4.85
2673 5886 2.757099 GCAATGGTCCAGGCCAGG 60.757 66.667 8.15 8.15 42.47 4.45
2674 5887 2.765969 CAATGGTCCAGGCCAGGT 59.234 61.111 14.79 0.00 42.47 4.00
2675 5888 1.379044 CAATGGTCCAGGCCAGGTC 60.379 63.158 14.79 8.61 42.47 3.85
2676 5889 1.852157 AATGGTCCAGGCCAGGTCA 60.852 57.895 14.79 13.88 42.47 4.02
2677 5890 1.856539 AATGGTCCAGGCCAGGTCAG 61.857 60.000 14.79 0.00 42.47 3.51
2678 5891 4.416738 GGTCCAGGCCAGGTCAGC 62.417 72.222 14.79 1.35 0.00 4.26
2679 5892 3.325753 GTCCAGGCCAGGTCAGCT 61.326 66.667 14.79 0.00 0.00 4.24
2680 5893 3.005539 TCCAGGCCAGGTCAGCTC 61.006 66.667 14.79 0.00 0.00 4.09
2681 5894 3.324930 CCAGGCCAGGTCAGCTCA 61.325 66.667 5.01 0.00 0.00 4.26
2682 5895 2.677289 CCAGGCCAGGTCAGCTCAT 61.677 63.158 5.01 0.00 0.00 2.90
2683 5896 1.302285 CAGGCCAGGTCAGCTCATT 59.698 57.895 5.01 0.00 0.00 2.57
2684 5897 0.543277 CAGGCCAGGTCAGCTCATTA 59.457 55.000 5.01 0.00 0.00 1.90
2685 5898 0.835941 AGGCCAGGTCAGCTCATTAG 59.164 55.000 5.01 0.00 0.00 1.73
2686 5899 0.543749 GGCCAGGTCAGCTCATTAGT 59.456 55.000 0.00 0.00 0.00 2.24
2687 5900 1.474143 GGCCAGGTCAGCTCATTAGTC 60.474 57.143 0.00 0.00 0.00 2.59
2688 5901 1.474143 GCCAGGTCAGCTCATTAGTCC 60.474 57.143 0.00 0.00 0.00 3.85
2689 5902 1.139853 CCAGGTCAGCTCATTAGTCCC 59.860 57.143 0.00 0.00 0.00 4.46
2690 5903 1.115467 AGGTCAGCTCATTAGTCCCG 58.885 55.000 0.00 0.00 0.00 5.14
2691 5904 0.105039 GGTCAGCTCATTAGTCCCGG 59.895 60.000 0.00 0.00 0.00 5.73
2692 5905 0.824759 GTCAGCTCATTAGTCCCGGT 59.175 55.000 0.00 0.00 0.00 5.28
2693 5906 1.207329 GTCAGCTCATTAGTCCCGGTT 59.793 52.381 0.00 0.00 0.00 4.44
2694 5907 1.480954 TCAGCTCATTAGTCCCGGTTC 59.519 52.381 0.00 0.00 0.00 3.62
2695 5908 1.207089 CAGCTCATTAGTCCCGGTTCA 59.793 52.381 0.00 0.00 0.00 3.18
2696 5909 1.906574 AGCTCATTAGTCCCGGTTCAA 59.093 47.619 0.00 0.00 0.00 2.69
2697 5910 2.505819 AGCTCATTAGTCCCGGTTCAAT 59.494 45.455 0.00 0.00 0.00 2.57
2698 5911 2.872858 GCTCATTAGTCCCGGTTCAATC 59.127 50.000 0.00 0.00 0.00 2.67
2699 5912 3.467803 CTCATTAGTCCCGGTTCAATCC 58.532 50.000 0.00 0.00 0.00 3.01
2700 5913 2.841266 TCATTAGTCCCGGTTCAATCCA 59.159 45.455 0.00 0.00 0.00 3.41
2701 5914 3.118408 TCATTAGTCCCGGTTCAATCCAG 60.118 47.826 0.00 0.00 0.00 3.86
2702 5915 2.241281 TAGTCCCGGTTCAATCCAGA 57.759 50.000 0.00 0.00 0.00 3.86
2703 5916 1.358152 AGTCCCGGTTCAATCCAGAA 58.642 50.000 0.00 0.00 0.00 3.02
2704 5917 1.003233 AGTCCCGGTTCAATCCAGAAC 59.997 52.381 0.00 0.00 45.50 3.01
2709 5922 3.948735 GTTCAATCCAGAACCGGGA 57.051 52.632 6.32 0.00 41.52 5.14
2710 5923 1.450025 GTTCAATCCAGAACCGGGAC 58.550 55.000 6.32 0.00 41.52 4.46
2711 5924 0.326927 TTCAATCCAGAACCGGGACC 59.673 55.000 6.32 0.00 37.23 4.46
2712 5925 1.077716 CAATCCAGAACCGGGACCC 60.078 63.158 6.32 0.00 37.23 4.46
2713 5926 1.540367 AATCCAGAACCGGGACCCA 60.540 57.895 12.15 0.00 37.23 4.51
2714 5927 0.919289 AATCCAGAACCGGGACCCAT 60.919 55.000 12.15 0.00 37.23 4.00
2715 5928 1.635817 ATCCAGAACCGGGACCCATG 61.636 60.000 12.15 3.12 37.23 3.66
2716 5929 2.272146 CAGAACCGGGACCCATGG 59.728 66.667 12.15 4.14 0.00 3.66
2717 5930 3.015145 AGAACCGGGACCCATGGG 61.015 66.667 30.23 30.23 42.03 4.00
2728 5941 2.444517 CCATGGGGGCATTGGACC 60.445 66.667 2.85 0.00 43.93 4.46
2729 5942 2.691732 CATGGGGGCATTGGACCT 59.308 61.111 0.00 0.00 44.19 3.85
2730 5943 1.759299 CATGGGGGCATTGGACCTG 60.759 63.158 0.00 0.00 44.19 4.00
2731 5944 3.012775 ATGGGGGCATTGGACCTGG 62.013 63.158 0.00 0.00 44.19 4.45
2732 5945 3.672503 GGGGGCATTGGACCTGGT 61.673 66.667 0.00 0.00 44.19 4.00
2733 5946 2.445155 GGGGCATTGGACCTGGTT 59.555 61.111 0.00 0.00 44.19 3.67
2734 5947 1.682344 GGGGCATTGGACCTGGTTC 60.682 63.158 0.00 0.00 44.19 3.62
2735 5948 2.046285 GGGCATTGGACCTGGTTCG 61.046 63.158 0.00 0.00 40.08 3.95
2736 5949 1.303317 GGCATTGGACCTGGTTCGT 60.303 57.895 0.00 0.00 0.00 3.85
2737 5950 1.586154 GGCATTGGACCTGGTTCGTG 61.586 60.000 0.00 3.25 0.00 4.35
2738 5951 0.605319 GCATTGGACCTGGTTCGTGA 60.605 55.000 12.91 0.00 0.00 4.35
2739 5952 1.442769 CATTGGACCTGGTTCGTGAG 58.557 55.000 0.00 0.00 0.00 3.51
2740 5953 0.321653 ATTGGACCTGGTTCGTGAGC 60.322 55.000 0.00 0.00 0.00 4.26
2741 5954 2.047179 GGACCTGGTTCGTGAGCC 60.047 66.667 0.00 0.00 0.00 4.70
2742 5955 2.047179 GACCTGGTTCGTGAGCCC 60.047 66.667 0.00 0.00 0.00 5.19
2743 5956 3.607370 GACCTGGTTCGTGAGCCCC 62.607 68.421 0.00 0.00 0.00 5.80
2744 5957 4.760047 CCTGGTTCGTGAGCCCCG 62.760 72.222 0.00 0.00 0.00 5.73
2745 5958 4.760047 CTGGTTCGTGAGCCCCGG 62.760 72.222 0.00 0.00 0.00 5.73
2775 5988 2.600173 CCACGTGGGCCATTGGTT 60.600 61.111 27.57 0.03 0.00 3.67
2776 5989 2.635443 CCACGTGGGCCATTGGTTC 61.635 63.158 27.57 4.45 0.00 3.62
2777 5990 2.282887 ACGTGGGCCATTGGTTCC 60.283 61.111 10.70 7.35 0.00 3.62
2778 5991 3.439540 CGTGGGCCATTGGTTCCG 61.440 66.667 10.70 2.04 0.00 4.30
2779 5992 3.068064 GTGGGCCATTGGTTCCGG 61.068 66.667 10.70 0.00 0.00 5.14
2780 5993 3.585428 TGGGCCATTGGTTCCGGT 61.585 61.111 0.00 0.00 0.00 5.28
2781 5994 2.283604 GGGCCATTGGTTCCGGTT 60.284 61.111 4.39 0.00 0.00 4.44
2782 5995 2.348104 GGGCCATTGGTTCCGGTTC 61.348 63.158 4.39 0.00 0.00 3.62
2783 5996 2.696759 GGCCATTGGTTCCGGTTCG 61.697 63.158 0.00 0.00 0.00 3.95
2784 5997 1.969589 GCCATTGGTTCCGGTTCGT 60.970 57.895 0.00 0.00 0.00 3.85
2785 5998 1.918868 GCCATTGGTTCCGGTTCGTC 61.919 60.000 0.00 0.00 0.00 4.20
2786 5999 0.321298 CCATTGGTTCCGGTTCGTCT 60.321 55.000 0.00 0.00 0.00 4.18
2787 6000 0.796312 CATTGGTTCCGGTTCGTCTG 59.204 55.000 0.00 0.00 0.00 3.51
2788 6001 0.321298 ATTGGTTCCGGTTCGTCTGG 60.321 55.000 0.00 2.66 43.70 3.86
2792 6005 2.116772 TCCGGTTCGTCTGGACCT 59.883 61.111 0.00 0.00 45.77 3.85
2793 6006 1.532316 TCCGGTTCGTCTGGACCTT 60.532 57.895 0.00 0.00 45.77 3.50
2794 6007 1.117142 TCCGGTTCGTCTGGACCTTT 61.117 55.000 0.00 0.00 45.77 3.11
2795 6008 0.250166 CCGGTTCGTCTGGACCTTTT 60.250 55.000 0.00 0.00 45.09 2.27
2796 6009 0.865769 CGGTTCGTCTGGACCTTTTG 59.134 55.000 0.00 0.00 0.00 2.44
2807 6020 3.771978 CCTTTTGGTCCCGGTTGG 58.228 61.111 0.00 0.00 34.07 3.77
2808 6021 1.152631 CCTTTTGGTCCCGGTTGGT 60.153 57.895 0.00 0.00 34.77 3.67
2809 6022 1.460273 CCTTTTGGTCCCGGTTGGTG 61.460 60.000 0.00 0.00 34.77 4.17
2810 6023 1.455959 TTTTGGTCCCGGTTGGTGG 60.456 57.895 0.00 0.00 34.77 4.61
2817 6030 2.667199 CCGGTTGGTGGGACGAAC 60.667 66.667 0.00 0.00 36.30 3.95
2819 6032 2.667199 GGTTGGTGGGACGAACCG 60.667 66.667 5.08 0.00 44.79 4.44
2820 6033 2.667199 GTTGGTGGGACGAACCGG 60.667 66.667 0.00 0.00 40.86 5.28
2821 6034 3.943691 TTGGTGGGACGAACCGGG 61.944 66.667 6.32 0.00 40.86 5.73
2822 6035 4.938074 TGGTGGGACGAACCGGGA 62.938 66.667 6.32 0.00 40.86 5.14
2823 6036 4.383861 GGTGGGACGAACCGGGAC 62.384 72.222 6.32 0.00 40.11 4.46
2824 6037 4.383861 GTGGGACGAACCGGGACC 62.384 72.222 6.32 0.00 40.11 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 6.677431 GCTTCCAGTTTCAGATTGCTAATCAG 60.677 42.308 10.26 4.16 40.42 2.90
13 14 5.124457 GCTTCCAGTTTCAGATTGCTAATCA 59.876 40.000 10.26 0.00 40.42 2.57
14 15 5.576895 GCTTCCAGTTTCAGATTGCTAATC 58.423 41.667 0.00 0.00 38.20 1.75
15 16 4.095483 CGCTTCCAGTTTCAGATTGCTAAT 59.905 41.667 0.00 0.00 0.00 1.73
16 17 3.436704 CGCTTCCAGTTTCAGATTGCTAA 59.563 43.478 0.00 0.00 0.00 3.09
17 18 3.002791 CGCTTCCAGTTTCAGATTGCTA 58.997 45.455 0.00 0.00 0.00 3.49
18 19 1.808945 CGCTTCCAGTTTCAGATTGCT 59.191 47.619 0.00 0.00 0.00 3.91
19 20 1.730446 GCGCTTCCAGTTTCAGATTGC 60.730 52.381 0.00 0.00 0.00 3.56
20 21 1.135575 GGCGCTTCCAGTTTCAGATTG 60.136 52.381 7.64 0.00 34.01 2.67
21 22 1.168714 GGCGCTTCCAGTTTCAGATT 58.831 50.000 7.64 0.00 34.01 2.40
22 23 1.021390 CGGCGCTTCCAGTTTCAGAT 61.021 55.000 7.64 0.00 34.01 2.90
23 24 1.667830 CGGCGCTTCCAGTTTCAGA 60.668 57.895 7.64 0.00 34.01 3.27
24 25 1.021390 ATCGGCGCTTCCAGTTTCAG 61.021 55.000 7.64 0.00 34.01 3.02
25 26 1.003839 ATCGGCGCTTCCAGTTTCA 60.004 52.632 7.64 0.00 34.01 2.69
26 27 1.425428 CATCGGCGCTTCCAGTTTC 59.575 57.895 7.64 0.00 34.01 2.78
27 28 2.690778 GCATCGGCGCTTCCAGTTT 61.691 57.895 7.64 0.00 34.01 2.66
28 29 3.127533 GCATCGGCGCTTCCAGTT 61.128 61.111 7.64 0.00 34.01 3.16
29 30 4.393155 TGCATCGGCGCTTCCAGT 62.393 61.111 7.64 0.00 45.35 4.00
30 31 3.869272 GTGCATCGGCGCTTCCAG 61.869 66.667 7.64 0.00 46.90 3.86
37 38 0.530650 AAGAGGTATGTGCATCGGCG 60.531 55.000 0.00 0.00 45.35 6.46
38 39 0.940126 CAAGAGGTATGTGCATCGGC 59.060 55.000 0.00 0.00 41.68 5.54
39 40 2.602257 TCAAGAGGTATGTGCATCGG 57.398 50.000 0.00 0.00 0.00 4.18
40 41 3.242543 GCTTTCAAGAGGTATGTGCATCG 60.243 47.826 0.00 0.00 0.00 3.84
41 42 3.691118 TGCTTTCAAGAGGTATGTGCATC 59.309 43.478 0.00 0.00 0.00 3.91
42 43 3.441572 GTGCTTTCAAGAGGTATGTGCAT 59.558 43.478 0.00 0.00 0.00 3.96
43 44 2.813754 GTGCTTTCAAGAGGTATGTGCA 59.186 45.455 0.00 0.00 0.00 4.57
44 45 2.162408 GGTGCTTTCAAGAGGTATGTGC 59.838 50.000 0.00 0.00 0.00 4.57
45 46 3.679389 AGGTGCTTTCAAGAGGTATGTG 58.321 45.455 0.00 0.00 0.00 3.21
46 47 4.532521 AGTAGGTGCTTTCAAGAGGTATGT 59.467 41.667 0.00 0.00 0.00 2.29
47 48 5.091261 AGTAGGTGCTTTCAAGAGGTATG 57.909 43.478 0.00 0.00 0.00 2.39
48 49 5.248477 TCAAGTAGGTGCTTTCAAGAGGTAT 59.752 40.000 0.00 0.00 0.00 2.73
49 50 4.591498 TCAAGTAGGTGCTTTCAAGAGGTA 59.409 41.667 0.00 0.00 0.00 3.08
50 51 3.391296 TCAAGTAGGTGCTTTCAAGAGGT 59.609 43.478 0.00 0.00 0.00 3.85
51 52 3.748568 GTCAAGTAGGTGCTTTCAAGAGG 59.251 47.826 0.00 0.00 0.00 3.69
52 53 4.212214 GTGTCAAGTAGGTGCTTTCAAGAG 59.788 45.833 0.00 0.00 0.00 2.85
53 54 4.127171 GTGTCAAGTAGGTGCTTTCAAGA 58.873 43.478 0.00 0.00 0.00 3.02
54 55 3.251004 GGTGTCAAGTAGGTGCTTTCAAG 59.749 47.826 0.00 0.00 0.00 3.02
55 56 3.211045 GGTGTCAAGTAGGTGCTTTCAA 58.789 45.455 0.00 0.00 0.00 2.69
56 57 2.805295 CGGTGTCAAGTAGGTGCTTTCA 60.805 50.000 0.00 0.00 0.00 2.69
57 58 1.798813 CGGTGTCAAGTAGGTGCTTTC 59.201 52.381 0.00 0.00 0.00 2.62
58 59 1.140252 ACGGTGTCAAGTAGGTGCTTT 59.860 47.619 0.00 0.00 0.00 3.51
59 60 0.756903 ACGGTGTCAAGTAGGTGCTT 59.243 50.000 0.00 0.00 0.00 3.91
60 61 0.317479 GACGGTGTCAAGTAGGTGCT 59.683 55.000 0.00 0.00 32.09 4.40
61 62 0.669625 GGACGGTGTCAAGTAGGTGC 60.670 60.000 0.00 0.00 33.68 5.01
62 63 0.966920 AGGACGGTGTCAAGTAGGTG 59.033 55.000 0.00 0.00 33.68 4.00
63 64 0.966920 CAGGACGGTGTCAAGTAGGT 59.033 55.000 0.00 0.00 33.68 3.08
64 65 0.389948 GCAGGACGGTGTCAAGTAGG 60.390 60.000 0.00 0.00 33.68 3.18
65 66 0.317160 TGCAGGACGGTGTCAAGTAG 59.683 55.000 0.00 0.00 33.68 2.57
66 67 0.317160 CTGCAGGACGGTGTCAAGTA 59.683 55.000 5.57 0.00 33.68 2.24
67 68 1.069765 CTGCAGGACGGTGTCAAGT 59.930 57.895 5.57 0.00 33.68 3.16
68 69 0.317160 TACTGCAGGACGGTGTCAAG 59.683 55.000 19.93 0.00 38.72 3.02
69 70 0.032952 GTACTGCAGGACGGTGTCAA 59.967 55.000 14.67 0.00 38.72 3.18
70 71 1.110518 TGTACTGCAGGACGGTGTCA 61.111 55.000 23.93 2.27 38.72 3.58
71 72 0.032952 TTGTACTGCAGGACGGTGTC 59.967 55.000 23.93 0.00 38.72 3.67
72 73 0.033504 CTTGTACTGCAGGACGGTGT 59.966 55.000 23.93 0.80 38.72 4.16
73 74 1.291877 GCTTGTACTGCAGGACGGTG 61.292 60.000 23.93 16.38 38.72 4.94
74 75 1.004918 GCTTGTACTGCAGGACGGT 60.005 57.895 23.93 2.40 42.04 4.83
75 76 1.016130 CAGCTTGTACTGCAGGACGG 61.016 60.000 23.93 19.02 0.00 4.79
76 77 0.038251 TCAGCTTGTACTGCAGGACG 60.038 55.000 23.93 11.90 37.59 4.79
77 78 2.393271 ATCAGCTTGTACTGCAGGAC 57.607 50.000 22.94 22.94 37.59 3.85
78 79 3.679917 GCTAATCAGCTTGTACTGCAGGA 60.680 47.826 19.93 6.60 44.93 3.86
79 80 2.611292 GCTAATCAGCTTGTACTGCAGG 59.389 50.000 19.93 0.00 44.93 4.85
80 81 3.940657 GCTAATCAGCTTGTACTGCAG 57.059 47.619 13.48 13.48 44.93 4.41
92 93 6.293516 GCTTCCAGATTCAGATTGCTAATCAG 60.294 42.308 10.26 4.16 40.42 2.90
93 94 5.530171 GCTTCCAGATTCAGATTGCTAATCA 59.470 40.000 10.26 0.00 40.42 2.57
94 95 5.333952 CGCTTCCAGATTCAGATTGCTAATC 60.334 44.000 0.00 0.00 38.20 1.75
95 96 4.514441 CGCTTCCAGATTCAGATTGCTAAT 59.486 41.667 0.00 0.00 0.00 1.73
96 97 3.873361 CGCTTCCAGATTCAGATTGCTAA 59.127 43.478 0.00 0.00 0.00 3.09
97 98 3.461061 CGCTTCCAGATTCAGATTGCTA 58.539 45.455 0.00 0.00 0.00 3.49
98 99 2.286872 CGCTTCCAGATTCAGATTGCT 58.713 47.619 0.00 0.00 0.00 3.91
99 100 1.268437 GCGCTTCCAGATTCAGATTGC 60.268 52.381 0.00 0.00 0.00 3.56
100 101 1.332997 GGCGCTTCCAGATTCAGATTG 59.667 52.381 7.64 0.00 34.01 2.67
101 102 1.673168 GGCGCTTCCAGATTCAGATT 58.327 50.000 7.64 0.00 34.01 2.40
102 103 0.531532 CGGCGCTTCCAGATTCAGAT 60.532 55.000 7.64 0.00 34.01 2.90
103 104 1.153568 CGGCGCTTCCAGATTCAGA 60.154 57.895 7.64 0.00 34.01 3.27
104 105 0.531532 ATCGGCGCTTCCAGATTCAG 60.532 55.000 7.64 0.00 34.01 3.02
105 106 0.811219 CATCGGCGCTTCCAGATTCA 60.811 55.000 7.64 0.00 34.01 2.57
106 107 0.811616 ACATCGGCGCTTCCAGATTC 60.812 55.000 7.64 0.00 34.01 2.52
107 108 1.091771 CACATCGGCGCTTCCAGATT 61.092 55.000 7.64 0.00 34.01 2.40
108 109 1.522355 CACATCGGCGCTTCCAGAT 60.522 57.895 7.64 2.19 34.01 2.90
109 110 2.125552 CACATCGGCGCTTCCAGA 60.126 61.111 7.64 0.00 34.01 3.86
110 111 3.869272 GCACATCGGCGCTTCCAG 61.869 66.667 7.64 0.00 34.01 3.86
111 112 4.393155 AGCACATCGGCGCTTCCA 62.393 61.111 7.64 0.00 39.27 3.53
112 113 3.869272 CAGCACATCGGCGCTTCC 61.869 66.667 7.64 0.00 35.96 3.46
113 114 2.815211 TCAGCACATCGGCGCTTC 60.815 61.111 7.64 0.00 35.96 3.86
114 115 3.121030 GTCAGCACATCGGCGCTT 61.121 61.111 7.64 0.00 35.96 4.68
117 118 3.693382 TACCGTCAGCACATCGGCG 62.693 63.158 0.00 0.00 46.92 6.46
118 119 1.447140 TTACCGTCAGCACATCGGC 60.447 57.895 8.96 0.00 46.92 5.54
120 121 1.410737 CCGTTACCGTCAGCACATCG 61.411 60.000 0.00 0.00 0.00 3.84
121 122 0.389426 ACCGTTACCGTCAGCACATC 60.389 55.000 0.00 0.00 0.00 3.06
122 123 0.669318 CACCGTTACCGTCAGCACAT 60.669 55.000 0.00 0.00 0.00 3.21
123 124 1.300311 CACCGTTACCGTCAGCACA 60.300 57.895 0.00 0.00 0.00 4.57
124 125 2.664436 GCACCGTTACCGTCAGCAC 61.664 63.158 0.00 0.00 0.00 4.40
125 126 2.356553 GCACCGTTACCGTCAGCA 60.357 61.111 0.00 0.00 0.00 4.41
126 127 3.116531 GGCACCGTTACCGTCAGC 61.117 66.667 0.00 0.00 0.00 4.26
127 128 2.807895 CGGCACCGTTACCGTCAG 60.808 66.667 0.00 0.00 44.46 3.51
155 156 0.892063 AAGCTCGTCCTGGAGAACTC 59.108 55.000 0.00 0.00 36.08 3.01
156 157 0.605589 CAAGCTCGTCCTGGAGAACT 59.394 55.000 0.00 0.00 36.08 3.01
157 158 0.603569 TCAAGCTCGTCCTGGAGAAC 59.396 55.000 0.00 0.00 36.08 3.01
158 159 1.205655 CATCAAGCTCGTCCTGGAGAA 59.794 52.381 0.00 0.00 36.08 2.87
159 160 0.820226 CATCAAGCTCGTCCTGGAGA 59.180 55.000 0.00 0.00 36.08 3.71
160 161 0.534412 ACATCAAGCTCGTCCTGGAG 59.466 55.000 0.00 0.00 37.11 3.86
161 162 0.976641 AACATCAAGCTCGTCCTGGA 59.023 50.000 0.00 0.00 0.00 3.86
162 163 1.081892 CAACATCAAGCTCGTCCTGG 58.918 55.000 0.00 0.00 0.00 4.45
163 164 1.081892 CCAACATCAAGCTCGTCCTG 58.918 55.000 0.00 0.00 0.00 3.86
164 165 0.674895 GCCAACATCAAGCTCGTCCT 60.675 55.000 0.00 0.00 0.00 3.85
165 166 0.955428 TGCCAACATCAAGCTCGTCC 60.955 55.000 0.00 0.00 0.00 4.79
166 167 0.445436 CTGCCAACATCAAGCTCGTC 59.555 55.000 0.00 0.00 0.00 4.20
167 168 0.035317 TCTGCCAACATCAAGCTCGT 59.965 50.000 0.00 0.00 0.00 4.18
168 169 0.725686 CTCTGCCAACATCAAGCTCG 59.274 55.000 0.00 0.00 0.00 5.03
169 170 2.105006 TCTCTGCCAACATCAAGCTC 57.895 50.000 0.00 0.00 0.00 4.09
170 171 2.366533 CATCTCTGCCAACATCAAGCT 58.633 47.619 0.00 0.00 0.00 3.74
171 172 1.202268 GCATCTCTGCCAACATCAAGC 60.202 52.381 0.00 0.00 42.88 4.01
172 173 2.846039 GCATCTCTGCCAACATCAAG 57.154 50.000 0.00 0.00 42.88 3.02
183 184 6.157904 CAGTTCATCTATGGTAGCATCTCTG 58.842 44.000 11.40 7.34 0.00 3.35
184 185 5.279406 GCAGTTCATCTATGGTAGCATCTCT 60.279 44.000 11.40 0.00 0.00 3.10
185 186 4.928615 GCAGTTCATCTATGGTAGCATCTC 59.071 45.833 11.40 0.00 0.00 2.75
186 187 4.262808 GGCAGTTCATCTATGGTAGCATCT 60.263 45.833 11.40 0.00 0.00 2.90
187 188 3.999663 GGCAGTTCATCTATGGTAGCATC 59.000 47.826 11.40 0.00 0.00 3.91
188 189 3.649981 AGGCAGTTCATCTATGGTAGCAT 59.350 43.478 12.78 12.78 0.00 3.79
189 190 3.041211 AGGCAGTTCATCTATGGTAGCA 58.959 45.455 0.00 0.00 0.00 3.49
190 191 3.323403 AGAGGCAGTTCATCTATGGTAGC 59.677 47.826 0.00 0.00 33.47 3.58
191 192 5.537188 GAAGAGGCAGTTCATCTATGGTAG 58.463 45.833 0.00 0.00 34.25 3.18
192 193 4.038042 CGAAGAGGCAGTTCATCTATGGTA 59.962 45.833 0.00 0.00 34.25 3.25
193 194 3.181471 CGAAGAGGCAGTTCATCTATGGT 60.181 47.826 0.00 0.00 34.25 3.55
194 195 3.181471 ACGAAGAGGCAGTTCATCTATGG 60.181 47.826 0.00 0.00 34.25 2.74
195 196 3.801050 CACGAAGAGGCAGTTCATCTATG 59.199 47.826 0.00 0.00 34.25 2.23
196 197 3.449018 ACACGAAGAGGCAGTTCATCTAT 59.551 43.478 0.00 0.00 34.25 1.98
197 198 2.826128 ACACGAAGAGGCAGTTCATCTA 59.174 45.455 0.00 0.00 34.25 1.98
198 199 1.620819 ACACGAAGAGGCAGTTCATCT 59.379 47.619 0.00 0.00 37.44 2.90
199 200 1.728971 CACACGAAGAGGCAGTTCATC 59.271 52.381 0.00 0.00 0.00 2.92
200 201 1.800805 CACACGAAGAGGCAGTTCAT 58.199 50.000 0.00 0.00 0.00 2.57
201 202 0.880278 GCACACGAAGAGGCAGTTCA 60.880 55.000 0.00 0.00 0.00 3.18
202 203 0.880278 TGCACACGAAGAGGCAGTTC 60.880 55.000 0.00 0.00 0.00 3.01
203 204 0.882042 CTGCACACGAAGAGGCAGTT 60.882 55.000 15.88 0.00 46.47 3.16
204 205 1.301244 CTGCACACGAAGAGGCAGT 60.301 57.895 15.88 0.00 46.47 4.40
205 206 3.559024 CTGCACACGAAGAGGCAG 58.441 61.111 0.00 0.00 46.47 4.85
206 207 2.666190 GCTGCACACGAAGAGGCA 60.666 61.111 0.00 0.00 34.66 4.75
207 208 2.180131 CTTGCTGCACACGAAGAGGC 62.180 60.000 0.00 0.00 0.00 4.70
208 209 1.864862 CTTGCTGCACACGAAGAGG 59.135 57.895 0.00 0.00 0.00 3.69
209 210 1.206072 GCTTGCTGCACACGAAGAG 59.794 57.895 0.00 0.00 42.31 2.85
210 211 3.333414 GCTTGCTGCACACGAAGA 58.667 55.556 0.00 0.00 42.31 2.87
219 220 3.958147 TACTCCGGCTGCTTGCTGC 62.958 63.158 14.62 14.62 46.34 5.25
221 222 1.831652 AACTACTCCGGCTGCTTGCT 61.832 55.000 0.00 0.00 42.39 3.91
222 223 1.376037 AACTACTCCGGCTGCTTGC 60.376 57.895 0.00 0.00 41.94 4.01
223 224 0.037326 TCAACTACTCCGGCTGCTTG 60.037 55.000 0.00 0.00 0.00 4.01
224 225 0.905357 ATCAACTACTCCGGCTGCTT 59.095 50.000 0.00 0.00 0.00 3.91
225 226 0.461961 GATCAACTACTCCGGCTGCT 59.538 55.000 0.00 0.00 0.00 4.24
226 227 0.461961 AGATCAACTACTCCGGCTGC 59.538 55.000 0.00 0.00 0.00 5.25
227 228 2.969628 AAGATCAACTACTCCGGCTG 57.030 50.000 0.00 0.00 0.00 4.85
228 229 3.385111 CCTAAAGATCAACTACTCCGGCT 59.615 47.826 0.00 0.00 0.00 5.52
229 230 3.383825 TCCTAAAGATCAACTACTCCGGC 59.616 47.826 0.00 0.00 0.00 6.13
230 231 4.401519 TGTCCTAAAGATCAACTACTCCGG 59.598 45.833 0.00 0.00 0.00 5.14
231 232 5.450688 CCTGTCCTAAAGATCAACTACTCCG 60.451 48.000 0.00 0.00 0.00 4.63
232 233 5.163395 CCCTGTCCTAAAGATCAACTACTCC 60.163 48.000 0.00 0.00 0.00 3.85
233 234 5.682730 GCCCTGTCCTAAAGATCAACTACTC 60.683 48.000 0.00 0.00 0.00 2.59
234 235 4.162509 GCCCTGTCCTAAAGATCAACTACT 59.837 45.833 0.00 0.00 0.00 2.57
235 236 4.081087 TGCCCTGTCCTAAAGATCAACTAC 60.081 45.833 0.00 0.00 0.00 2.73
236 237 4.081087 GTGCCCTGTCCTAAAGATCAACTA 60.081 45.833 0.00 0.00 0.00 2.24
237 238 2.912956 TGCCCTGTCCTAAAGATCAACT 59.087 45.455 0.00 0.00 0.00 3.16
238 239 3.010420 GTGCCCTGTCCTAAAGATCAAC 58.990 50.000 0.00 0.00 0.00 3.18
239 240 2.354704 CGTGCCCTGTCCTAAAGATCAA 60.355 50.000 0.00 0.00 0.00 2.57
240 241 1.207089 CGTGCCCTGTCCTAAAGATCA 59.793 52.381 0.00 0.00 0.00 2.92
241 242 1.480954 TCGTGCCCTGTCCTAAAGATC 59.519 52.381 0.00 0.00 0.00 2.75
242 243 1.207329 GTCGTGCCCTGTCCTAAAGAT 59.793 52.381 0.00 0.00 0.00 2.40
243 244 0.606604 GTCGTGCCCTGTCCTAAAGA 59.393 55.000 0.00 0.00 0.00 2.52
244 245 0.736325 CGTCGTGCCCTGTCCTAAAG 60.736 60.000 0.00 0.00 0.00 1.85
245 246 1.180456 TCGTCGTGCCCTGTCCTAAA 61.180 55.000 0.00 0.00 0.00 1.85
246 247 1.604308 TCGTCGTGCCCTGTCCTAA 60.604 57.895 0.00 0.00 0.00 2.69
247 248 2.034532 TCGTCGTGCCCTGTCCTA 59.965 61.111 0.00 0.00 0.00 2.94
248 249 3.681835 GTCGTCGTGCCCTGTCCT 61.682 66.667 0.00 0.00 0.00 3.85
250 251 3.547249 TTCGTCGTCGTGCCCTGTC 62.547 63.158 1.33 0.00 38.33 3.51
251 252 3.598715 TTCGTCGTCGTGCCCTGT 61.599 61.111 1.33 0.00 38.33 4.00
252 253 3.103911 GTTCGTCGTCGTGCCCTG 61.104 66.667 1.33 0.00 38.33 4.45
253 254 4.695231 CGTTCGTCGTCGTGCCCT 62.695 66.667 1.33 0.00 38.33 5.19
256 257 4.390584 GTGCGTTCGTCGTCGTGC 62.391 66.667 1.33 5.94 42.13 5.34
257 258 4.087079 CGTGCGTTCGTCGTCGTG 62.087 66.667 1.33 0.00 42.13 4.35
279 280 4.671549 CTGCGTGTGTGCCTTGCG 62.672 66.667 0.00 0.00 0.00 4.85
280 281 4.988486 GCTGCGTGTGTGCCTTGC 62.988 66.667 0.00 0.00 0.00 4.01
281 282 3.245948 GAGCTGCGTGTGTGCCTTG 62.246 63.158 0.00 0.00 0.00 3.61
282 283 2.974698 GAGCTGCGTGTGTGCCTT 60.975 61.111 0.00 0.00 0.00 4.35
283 284 4.240103 TGAGCTGCGTGTGTGCCT 62.240 61.111 0.00 0.00 0.00 4.75
284 285 4.017877 GTGAGCTGCGTGTGTGCC 62.018 66.667 0.00 0.00 0.00 5.01
285 286 4.360027 CGTGAGCTGCGTGTGTGC 62.360 66.667 0.00 0.00 0.00 4.57
286 287 2.416372 GAACGTGAGCTGCGTGTGTG 62.416 60.000 12.77 0.00 42.10 3.82
287 288 2.202878 AACGTGAGCTGCGTGTGT 60.203 55.556 12.77 0.00 42.10 3.72
288 289 2.546321 GAACGTGAGCTGCGTGTG 59.454 61.111 12.77 0.00 42.10 3.82
289 290 2.661866 GGAACGTGAGCTGCGTGT 60.662 61.111 12.77 4.77 42.10 4.49
290 291 3.414700 GGGAACGTGAGCTGCGTG 61.415 66.667 12.77 0.00 42.10 5.34
291 292 4.681978 GGGGAACGTGAGCTGCGT 62.682 66.667 7.06 7.06 45.07 5.24
293 294 3.959991 GAGGGGGAACGTGAGCTGC 62.960 68.421 0.00 0.00 0.00 5.25
294 295 2.266055 GAGGGGGAACGTGAGCTG 59.734 66.667 0.00 0.00 0.00 4.24
295 296 3.003763 GGAGGGGGAACGTGAGCT 61.004 66.667 0.00 0.00 0.00 4.09
296 297 2.595009 GATGGAGGGGGAACGTGAGC 62.595 65.000 0.00 0.00 0.00 4.26
297 298 1.522569 GATGGAGGGGGAACGTGAG 59.477 63.158 0.00 0.00 0.00 3.51
298 299 2.355986 CGATGGAGGGGGAACGTGA 61.356 63.158 0.00 0.00 0.00 4.35
299 300 2.186903 CGATGGAGGGGGAACGTG 59.813 66.667 0.00 0.00 0.00 4.49
300 301 3.782443 GCGATGGAGGGGGAACGT 61.782 66.667 0.00 0.00 0.00 3.99
301 302 3.447025 GAGCGATGGAGGGGGAACG 62.447 68.421 0.00 0.00 0.00 3.95
302 303 2.506472 GAGCGATGGAGGGGGAAC 59.494 66.667 0.00 0.00 0.00 3.62
303 304 3.154473 CGAGCGATGGAGGGGGAA 61.154 66.667 0.00 0.00 0.00 3.97
306 307 3.917760 GACCGAGCGATGGAGGGG 61.918 72.222 0.00 0.00 0.00 4.79
307 308 3.917760 GGACCGAGCGATGGAGGG 61.918 72.222 0.00 0.00 0.00 4.30
308 309 3.917760 GGGACCGAGCGATGGAGG 61.918 72.222 0.00 0.00 0.00 4.30
309 310 2.835431 AGGGACCGAGCGATGGAG 60.835 66.667 0.00 0.00 0.00 3.86
310 311 2.833582 GAGGGACCGAGCGATGGA 60.834 66.667 0.00 0.00 0.00 3.41
311 312 4.271816 CGAGGGACCGAGCGATGG 62.272 72.222 0.00 0.00 0.00 3.51
312 313 4.271816 CCGAGGGACCGAGCGATG 62.272 72.222 0.00 0.00 0.00 3.84
313 314 4.816984 ACCGAGGGACCGAGCGAT 62.817 66.667 0.00 0.00 0.00 4.58
317 318 3.141488 CAGGACCGAGGGACCGAG 61.141 72.222 0.00 0.00 42.13 4.63
318 319 3.654143 TCAGGACCGAGGGACCGA 61.654 66.667 0.00 0.00 42.13 4.69
319 320 3.450115 GTCAGGACCGAGGGACCG 61.450 72.222 0.00 0.00 42.13 4.79
320 321 3.075641 GGTCAGGACCGAGGGACC 61.076 72.222 2.15 10.54 42.29 4.46
330 331 0.251832 AGGAGAAAGCTCGGTCAGGA 60.252 55.000 0.00 0.00 42.25 3.86
332 333 0.179150 CGAGGAGAAAGCTCGGTCAG 60.179 60.000 0.00 0.00 42.25 3.51
364 365 2.757124 CCAGCGGGCCTATTTCCCT 61.757 63.158 0.84 0.00 41.69 4.20
365 366 2.203351 CCAGCGGGCCTATTTCCC 60.203 66.667 0.84 0.00 40.43 3.97
366 367 2.203351 CCCAGCGGGCCTATTTCC 60.203 66.667 0.84 0.00 35.35 3.13
379 380 4.760047 CCGGACCGAAGTGCCCAG 62.760 72.222 17.49 0.00 0.00 4.45
428 429 4.373116 TTCCTGACCGAGCCGTGC 62.373 66.667 0.00 0.00 0.00 5.34
429 430 2.432628 GTTCCTGACCGAGCCGTG 60.433 66.667 0.00 0.00 0.00 4.94
505 527 2.465055 GAAGGGGAACTGGGTGACGG 62.465 65.000 0.00 0.00 0.00 4.79
515 537 2.001838 GGAGGAGGGGAAGGGGAAC 61.002 68.421 0.00 0.00 0.00 3.62
516 538 2.459710 GGAGGAGGGGAAGGGGAA 59.540 66.667 0.00 0.00 0.00 3.97
522 544 1.233369 GATCGAGGGAGGAGGGGAA 59.767 63.158 0.00 0.00 0.00 3.97
755 803 2.462782 CGGGTCTCCTCGTCGACTC 61.463 68.421 14.70 0.00 0.00 3.36
756 804 2.436292 CGGGTCTCCTCGTCGACT 60.436 66.667 14.70 0.00 0.00 4.18
757 805 4.176851 GCGGGTCTCCTCGTCGAC 62.177 72.222 5.18 5.18 0.00 4.20
760 808 3.519930 GAGGCGGGTCTCCTCGTC 61.520 72.222 0.00 0.00 40.51 4.20
1098 1153 3.314331 CTGGCACCGGTGAGGAGT 61.314 66.667 38.30 0.00 45.00 3.85
1895 2051 3.815401 ACTTCCAAGCACAGTTACATCAC 59.185 43.478 0.00 0.00 0.00 3.06
1896 2052 3.814842 CACTTCCAAGCACAGTTACATCA 59.185 43.478 0.00 0.00 0.00 3.07
1930 2086 3.189618 TCTACTTGCTGATGGCTCATG 57.810 47.619 0.00 0.00 42.39 3.07
1942 2098 1.324736 CGGCGATCAACTTCTACTTGC 59.675 52.381 0.00 0.00 0.00 4.01
1943 2099 1.927174 CCGGCGATCAACTTCTACTTG 59.073 52.381 9.30 0.00 0.00 3.16
1944 2100 1.822990 TCCGGCGATCAACTTCTACTT 59.177 47.619 9.30 0.00 0.00 2.24
1952 2108 3.338676 GGCGATCCGGCGATCAAC 61.339 66.667 9.30 4.83 44.55 3.18
1971 2127 2.887152 AGAAAAGCAGGCCAACACTAAG 59.113 45.455 5.01 0.00 0.00 2.18
2025 2200 6.257411 GGATCTCTCAACACTACATCACAATG 59.743 42.308 0.00 0.00 38.93 2.82
2101 2280 7.623925 GCGTCCAATAAAAATGCACAAATTGAT 60.624 33.333 0.00 0.00 0.00 2.57
2127 2306 2.046700 ACGTGTGGCCGTTATGGG 60.047 61.111 0.00 0.00 37.96 4.00
2128 2307 1.669760 ACACGTGTGGCCGTTATGG 60.670 57.895 22.71 0.00 39.45 2.74
2129 2308 1.495509 CACACGTGTGGCCGTTATG 59.504 57.895 35.65 11.41 42.10 1.90
2130 2309 3.960237 CACACGTGTGGCCGTTAT 58.040 55.556 35.65 1.93 42.10 1.89
2142 2321 1.666553 TTGCTCTAACGCCCACACG 60.667 57.895 0.00 0.00 39.50 4.49
2143 2322 0.602905 AGTTGCTCTAACGCCCACAC 60.603 55.000 0.00 0.00 44.15 3.82
2144 2323 0.320421 GAGTTGCTCTAACGCCCACA 60.320 55.000 0.00 0.00 44.15 4.17
2145 2324 0.037232 AGAGTTGCTCTAACGCCCAC 60.037 55.000 0.00 0.00 44.15 4.61
2146 2325 1.476891 CTAGAGTTGCTCTAACGCCCA 59.523 52.381 7.22 0.00 41.74 5.36
2147 2326 1.803252 GCTAGAGTTGCTCTAACGCCC 60.803 57.143 7.22 0.00 41.74 6.13
2148 2327 1.135083 TGCTAGAGTTGCTCTAACGCC 60.135 52.381 12.02 2.53 41.74 5.68
2149 2328 2.279582 TGCTAGAGTTGCTCTAACGC 57.720 50.000 7.22 8.33 41.74 4.84
2150 2329 4.291783 GGTATGCTAGAGTTGCTCTAACG 58.708 47.826 7.22 0.00 41.74 3.18
2151 2330 4.501743 GGGGTATGCTAGAGTTGCTCTAAC 60.502 50.000 7.22 4.03 41.74 2.34
2152 2331 3.641906 GGGGTATGCTAGAGTTGCTCTAA 59.358 47.826 7.22 0.00 41.74 2.10
2153 2332 3.231818 GGGGTATGCTAGAGTTGCTCTA 58.768 50.000 0.00 5.84 41.50 2.43
2169 2348 1.678425 GGGTCGTATTTTTGCGGGGTA 60.678 52.381 0.00 0.00 0.00 3.69
2199 2378 2.939103 CAATTTTGGTGAACCCGCAAAA 59.061 40.909 0.00 0.00 35.15 2.44
2233 2412 2.660612 CTCGGCCGCGTACGTTTTT 61.661 57.895 23.51 0.00 37.70 1.94
2239 2418 4.789075 TTCTGCTCGGCCGCGTAC 62.789 66.667 23.51 10.04 0.00 3.67
2258 2437 8.500753 TTCAAATTATGCAGGTTTAGATACGT 57.499 30.769 0.00 0.00 0.00 3.57
2295 2475 0.454452 GTTCGTGCAATTTCTCCCGC 60.454 55.000 0.00 0.00 0.00 6.13
2442 5655 2.742372 ATGGCGTCGTCCAGTTGC 60.742 61.111 12.72 0.00 39.89 4.17
2590 5803 1.533033 TCGAAGACCTCCAGTGGCA 60.533 57.895 3.51 0.00 0.00 4.92
2624 5837 4.828925 GTGAGGAGGAGCGCCAGC 62.829 72.222 9.88 0.00 45.58 4.85
2626 5839 1.754621 CTAGTGAGGAGGAGCGCCA 60.755 63.158 9.88 0.00 36.29 5.69
2629 5842 2.623878 TCTACTAGTGAGGAGGAGCG 57.376 55.000 5.39 0.00 33.89 5.03
2640 5853 3.053619 CCATTGCCCCCTTTTCTACTAGT 60.054 47.826 0.00 0.00 0.00 2.57
2641 5854 3.053619 ACCATTGCCCCCTTTTCTACTAG 60.054 47.826 0.00 0.00 0.00 2.57
2642 5855 2.923629 ACCATTGCCCCCTTTTCTACTA 59.076 45.455 0.00 0.00 0.00 1.82
2643 5856 1.716503 ACCATTGCCCCCTTTTCTACT 59.283 47.619 0.00 0.00 0.00 2.57
2644 5857 2.100197 GACCATTGCCCCCTTTTCTAC 58.900 52.381 0.00 0.00 0.00 2.59
2645 5858 1.006639 GGACCATTGCCCCCTTTTCTA 59.993 52.381 0.00 0.00 0.00 2.10
2646 5859 0.252239 GGACCATTGCCCCCTTTTCT 60.252 55.000 0.00 0.00 0.00 2.52
2647 5860 0.544120 TGGACCATTGCCCCCTTTTC 60.544 55.000 0.00 0.00 0.00 2.29
2648 5861 0.545071 CTGGACCATTGCCCCCTTTT 60.545 55.000 0.00 0.00 0.00 2.27
2649 5862 1.079073 CTGGACCATTGCCCCCTTT 59.921 57.895 0.00 0.00 0.00 3.11
2650 5863 2.772924 CTGGACCATTGCCCCCTT 59.227 61.111 0.00 0.00 0.00 3.95
2651 5864 3.350163 CCTGGACCATTGCCCCCT 61.350 66.667 0.00 0.00 0.00 4.79
2654 5867 4.380945 TGGCCTGGACCATTGCCC 62.381 66.667 24.94 11.31 43.35 5.36
2655 5868 2.757099 CTGGCCTGGACCATTGCC 60.757 66.667 22.49 22.49 44.27 4.52
2656 5869 2.757099 CCTGGCCTGGACCATTGC 60.757 66.667 23.89 7.45 39.54 3.56
2657 5870 1.379044 GACCTGGCCTGGACCATTG 60.379 63.158 33.43 6.95 39.54 2.82
2658 5871 1.852157 TGACCTGGCCTGGACCATT 60.852 57.895 33.43 12.10 39.54 3.16
2659 5872 2.204136 TGACCTGGCCTGGACCAT 60.204 61.111 33.43 12.51 39.54 3.55
2660 5873 2.930019 CTGACCTGGCCTGGACCA 60.930 66.667 33.43 25.80 38.29 4.02
2661 5874 4.416738 GCTGACCTGGCCTGGACC 62.417 72.222 33.43 23.04 0.00 4.46
2662 5875 3.322318 GAGCTGACCTGGCCTGGAC 62.322 68.421 33.43 27.09 0.00 4.02
2663 5876 3.005539 GAGCTGACCTGGCCTGGA 61.006 66.667 33.43 12.58 0.00 3.86
2664 5877 2.207501 AATGAGCTGACCTGGCCTGG 62.208 60.000 26.14 26.14 0.00 4.45
2665 5878 0.543277 TAATGAGCTGACCTGGCCTG 59.457 55.000 3.32 2.54 0.00 4.85
2666 5879 0.835941 CTAATGAGCTGACCTGGCCT 59.164 55.000 3.32 0.00 0.00 5.19
2667 5880 0.543749 ACTAATGAGCTGACCTGGCC 59.456 55.000 0.00 0.00 0.00 5.36
2668 5881 1.474143 GGACTAATGAGCTGACCTGGC 60.474 57.143 0.00 0.00 0.00 4.85
2669 5882 1.139853 GGGACTAATGAGCTGACCTGG 59.860 57.143 0.00 0.00 0.00 4.45
2670 5883 1.202463 CGGGACTAATGAGCTGACCTG 60.202 57.143 0.00 0.00 0.00 4.00
2671 5884 1.115467 CGGGACTAATGAGCTGACCT 58.885 55.000 0.00 0.00 0.00 3.85
2672 5885 0.105039 CCGGGACTAATGAGCTGACC 59.895 60.000 0.00 0.00 0.00 4.02
2673 5886 0.824759 ACCGGGACTAATGAGCTGAC 59.175 55.000 6.32 0.00 0.00 3.51
2674 5887 1.480954 GAACCGGGACTAATGAGCTGA 59.519 52.381 6.32 0.00 0.00 4.26
2675 5888 1.207089 TGAACCGGGACTAATGAGCTG 59.793 52.381 6.32 0.00 0.00 4.24
2676 5889 1.568504 TGAACCGGGACTAATGAGCT 58.431 50.000 6.32 0.00 0.00 4.09
2677 5890 2.396590 TTGAACCGGGACTAATGAGC 57.603 50.000 6.32 0.00 0.00 4.26
2678 5891 3.118408 TGGATTGAACCGGGACTAATGAG 60.118 47.826 6.32 0.00 0.00 2.90
2679 5892 2.841266 TGGATTGAACCGGGACTAATGA 59.159 45.455 6.32 0.00 0.00 2.57
2680 5893 3.118408 TCTGGATTGAACCGGGACTAATG 60.118 47.826 6.32 0.00 36.97 1.90
2681 5894 3.112263 TCTGGATTGAACCGGGACTAAT 58.888 45.455 6.32 0.27 36.97 1.73
2682 5895 2.542550 TCTGGATTGAACCGGGACTAA 58.457 47.619 6.32 0.00 36.97 2.24
2683 5896 2.235402 GTTCTGGATTGAACCGGGACTA 59.765 50.000 6.32 0.00 40.62 2.59
2684 5897 1.003233 GTTCTGGATTGAACCGGGACT 59.997 52.381 6.32 0.00 40.62 3.85
2685 5898 1.450025 GTTCTGGATTGAACCGGGAC 58.550 55.000 6.32 0.00 40.10 4.46
2686 5899 3.948735 GTTCTGGATTGAACCGGGA 57.051 52.632 6.32 0.00 40.10 5.14
2691 5904 1.450025 GTCCCGGTTCTGGATTGAAC 58.550 55.000 0.00 0.00 43.88 3.18
2692 5905 0.326927 GGTCCCGGTTCTGGATTGAA 59.673 55.000 0.00 0.00 33.65 2.69
2693 5906 1.559065 GGGTCCCGGTTCTGGATTGA 61.559 60.000 0.00 0.00 33.65 2.57
2694 5907 1.077716 GGGTCCCGGTTCTGGATTG 60.078 63.158 0.00 0.00 33.65 2.67
2695 5908 0.919289 ATGGGTCCCGGTTCTGGATT 60.919 55.000 2.65 0.00 33.65 3.01
2696 5909 1.307866 ATGGGTCCCGGTTCTGGAT 60.308 57.895 2.65 0.00 33.65 3.41
2697 5910 2.124085 ATGGGTCCCGGTTCTGGA 59.876 61.111 2.65 0.00 0.00 3.86
2698 5911 2.272146 CATGGGTCCCGGTTCTGG 59.728 66.667 2.65 0.00 0.00 3.86
2699 5912 2.272146 CCATGGGTCCCGGTTCTG 59.728 66.667 2.85 0.00 0.00 3.02
2700 5913 3.015145 CCCATGGGTCCCGGTTCT 61.015 66.667 23.93 0.00 0.00 3.01
2701 5914 4.123545 CCCCATGGGTCCCGGTTC 62.124 72.222 29.33 0.00 38.25 3.62
2711 5924 2.444517 GGTCCAATGCCCCCATGG 60.445 66.667 4.14 4.14 37.09 3.66
2712 5925 1.759299 CAGGTCCAATGCCCCCATG 60.759 63.158 0.00 0.00 0.00 3.66
2713 5926 2.691732 CAGGTCCAATGCCCCCAT 59.308 61.111 0.00 0.00 0.00 4.00
2714 5927 3.671410 CCAGGTCCAATGCCCCCA 61.671 66.667 0.00 0.00 0.00 4.96
2715 5928 3.238197 AACCAGGTCCAATGCCCCC 62.238 63.158 0.00 0.00 0.00 5.40
2716 5929 1.682344 GAACCAGGTCCAATGCCCC 60.682 63.158 0.00 0.00 0.00 5.80
2717 5930 2.046285 CGAACCAGGTCCAATGCCC 61.046 63.158 0.00 0.00 0.00 5.36
2718 5931 1.303317 ACGAACCAGGTCCAATGCC 60.303 57.895 0.00 0.00 0.00 4.40
2719 5932 0.605319 TCACGAACCAGGTCCAATGC 60.605 55.000 0.00 0.00 0.00 3.56
2720 5933 1.442769 CTCACGAACCAGGTCCAATG 58.557 55.000 0.00 0.00 0.00 2.82
2721 5934 0.321653 GCTCACGAACCAGGTCCAAT 60.322 55.000 0.00 0.00 0.00 3.16
2722 5935 1.070786 GCTCACGAACCAGGTCCAA 59.929 57.895 0.00 0.00 0.00 3.53
2723 5936 2.741092 GCTCACGAACCAGGTCCA 59.259 61.111 0.00 0.00 0.00 4.02
2724 5937 2.047179 GGCTCACGAACCAGGTCC 60.047 66.667 0.00 0.00 0.00 4.46
2725 5938 2.047179 GGGCTCACGAACCAGGTC 60.047 66.667 0.00 0.00 0.00 3.85
2726 5939 3.637273 GGGGCTCACGAACCAGGT 61.637 66.667 0.00 0.00 0.00 4.00
2727 5940 4.760047 CGGGGCTCACGAACCAGG 62.760 72.222 0.00 0.00 0.00 4.45
2728 5941 4.760047 CCGGGGCTCACGAACCAG 62.760 72.222 0.00 0.00 0.00 4.00
2758 5971 2.600173 AACCAATGGCCCACGTGG 60.600 61.111 28.26 28.26 37.09 4.94
2759 5972 2.635443 GGAACCAATGGCCCACGTG 61.635 63.158 9.08 9.08 0.00 4.49
2760 5973 2.282887 GGAACCAATGGCCCACGT 60.283 61.111 0.00 0.00 0.00 4.49
2761 5974 3.439540 CGGAACCAATGGCCCACG 61.440 66.667 0.00 0.00 0.00 4.94
2762 5975 3.068064 CCGGAACCAATGGCCCAC 61.068 66.667 0.00 0.00 0.00 4.61
2763 5976 3.153629 AACCGGAACCAATGGCCCA 62.154 57.895 9.46 0.00 0.00 5.36
2764 5977 2.283604 AACCGGAACCAATGGCCC 60.284 61.111 9.46 0.00 0.00 5.80
2765 5978 2.696759 CGAACCGGAACCAATGGCC 61.697 63.158 9.46 0.00 0.00 5.36
2766 5979 1.918868 GACGAACCGGAACCAATGGC 61.919 60.000 9.46 0.00 0.00 4.40
2767 5980 0.321298 AGACGAACCGGAACCAATGG 60.321 55.000 9.46 0.00 0.00 3.16
2768 5981 0.796312 CAGACGAACCGGAACCAATG 59.204 55.000 9.46 0.00 0.00 2.82
2769 5982 0.321298 CCAGACGAACCGGAACCAAT 60.321 55.000 9.46 0.00 0.00 3.16
2770 5983 1.070105 CCAGACGAACCGGAACCAA 59.930 57.895 9.46 0.00 0.00 3.67
2771 5984 1.833492 TCCAGACGAACCGGAACCA 60.833 57.895 9.46 0.00 0.00 3.67
2772 5985 1.373873 GTCCAGACGAACCGGAACC 60.374 63.158 9.46 0.00 0.00 3.62
2773 5986 1.373873 GGTCCAGACGAACCGGAAC 60.374 63.158 9.46 0.00 0.00 3.62
2774 5987 1.117142 AAGGTCCAGACGAACCGGAA 61.117 55.000 9.46 0.00 40.63 4.30
2775 5988 1.117142 AAAGGTCCAGACGAACCGGA 61.117 55.000 9.46 0.00 40.63 5.14
2776 5989 0.250166 AAAAGGTCCAGACGAACCGG 60.250 55.000 0.00 0.00 40.63 5.28
2777 5990 0.865769 CAAAAGGTCCAGACGAACCG 59.134 55.000 0.00 0.00 40.63 4.44
2778 5991 1.235724 CCAAAAGGTCCAGACGAACC 58.764 55.000 0.00 0.00 35.69 3.62
2779 5992 1.871676 GACCAAAAGGTCCAGACGAAC 59.128 52.381 3.27 0.00 33.21 3.95
2780 5993 2.249844 GACCAAAAGGTCCAGACGAA 57.750 50.000 3.27 0.00 33.21 3.85
2788 6001 1.176619 CCAACCGGGACCAAAAGGTC 61.177 60.000 6.32 6.11 40.01 3.85
2789 6002 1.152631 CCAACCGGGACCAAAAGGT 60.153 57.895 6.32 0.00 40.01 3.50
2790 6003 1.152631 ACCAACCGGGACCAAAAGG 60.153 57.895 6.32 0.00 41.15 3.11
2791 6004 1.460273 CCACCAACCGGGACCAAAAG 61.460 60.000 6.32 0.00 41.15 2.27
2792 6005 1.455959 CCACCAACCGGGACCAAAA 60.456 57.895 6.32 0.00 41.15 2.44
2793 6006 2.196229 CCACCAACCGGGACCAAA 59.804 61.111 6.32 0.00 41.15 3.28
2799 6012 3.943691 TTCGTCCCACCAACCGGG 61.944 66.667 6.32 0.00 46.03 5.73
2800 6013 2.667199 GTTCGTCCCACCAACCGG 60.667 66.667 0.00 0.00 38.77 5.28
2801 6014 2.667199 GGTTCGTCCCACCAACCG 60.667 66.667 0.00 0.00 34.04 4.44
2802 6015 2.667199 CGGTTCGTCCCACCAACC 60.667 66.667 0.00 0.00 36.91 3.77
2803 6016 2.667199 CCGGTTCGTCCCACCAAC 60.667 66.667 0.00 0.00 33.36 3.77
2804 6017 3.943691 CCCGGTTCGTCCCACCAA 61.944 66.667 0.00 0.00 33.36 3.67
2805 6018 4.938074 TCCCGGTTCGTCCCACCA 62.938 66.667 0.00 0.00 33.36 4.17
2806 6019 4.383861 GTCCCGGTTCGTCCCACC 62.384 72.222 0.00 0.00 0.00 4.61
2807 6020 4.383861 GGTCCCGGTTCGTCCCAC 62.384 72.222 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.