Multiple sequence alignment - TraesCS4B01G258500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G258500 chr4B 100.000 8522 0 0 1 8522 525170602 525179123 0.000000e+00 15738.0
1 TraesCS4B01G258500 chr4B 94.737 57 2 1 8327 8383 525178898 525178953 4.240000e-13 87.9
2 TraesCS4B01G258500 chr4D 94.680 3778 130 24 4511 8258 428525238 428521502 0.000000e+00 5797.0
3 TraesCS4B01G258500 chr4D 94.187 3664 157 36 774 4424 428528859 428525239 0.000000e+00 5535.0
4 TraesCS4B01G258500 chr4D 96.296 108 4 0 8313 8420 428487771 428487664 2.440000e-40 178.0
5 TraesCS4B01G258500 chr4D 94.203 69 4 0 8454 8522 428487658 428487590 1.170000e-18 106.0
6 TraesCS4B01G258500 chr4D 90.789 76 6 1 8259 8334 61701639 61701565 5.440000e-17 100.0
7 TraesCS4B01G258500 chr4D 87.805 82 7 3 8297 8376 428487757 428487677 9.110000e-15 93.5
8 TraesCS4B01G258500 chr4A 95.572 1739 62 5 4483 6220 37991188 37992912 0.000000e+00 2771.0
9 TraesCS4B01G258500 chr4A 96.781 1491 42 5 6142 7629 37992892 37994379 0.000000e+00 2483.0
10 TraesCS4B01G258500 chr4A 96.949 1344 33 6 2946 4287 37986323 37987660 0.000000e+00 2248.0
11 TraesCS4B01G258500 chr4A 95.377 1341 47 7 1617 2944 37984868 37986206 0.000000e+00 2119.0
12 TraesCS4B01G258500 chr4A 86.427 862 84 26 777 1625 37978298 37979139 0.000000e+00 913.0
13 TraesCS4B01G258500 chr4A 86.896 786 64 19 7665 8420 37994375 37995151 0.000000e+00 845.0
14 TraesCS4B01G258500 chr4A 85.660 523 69 4 6460 6977 17756603 17756082 5.820000e-151 545.0
15 TraesCS4B01G258500 chr4A 78.798 599 104 16 4690 5276 17758059 17757472 1.740000e-101 381.0
16 TraesCS4B01G258500 chr4A 93.909 197 7 3 4289 4485 37989851 37990042 8.370000e-75 292.0
17 TraesCS4B01G258500 chr4A 85.549 173 24 1 5303 5475 17845722 17845551 6.800000e-41 180.0
18 TraesCS4B01G258500 chr4A 88.618 123 11 3 8256 8376 37995017 37995138 6.890000e-31 147.0
19 TraesCS4B01G258500 chr4A 97.101 69 2 0 8454 8522 37995157 37995225 5.400000e-22 117.0
20 TraesCS4B01G258500 chr4A 82.069 145 17 6 6981 7123 17755919 17755782 1.940000e-21 115.0
21 TraesCS4B01G258500 chr4A 87.000 100 6 4 7110 7204 17754824 17754727 1.170000e-18 106.0
22 TraesCS4B01G258500 chr4A 94.231 52 1 1 8409 8460 576588677 576588726 2.550000e-10 78.7
23 TraesCS4B01G258500 chr5D 83.015 524 62 13 6460 6977 4413127 4413629 4.690000e-122 449.0
24 TraesCS4B01G258500 chr5D 82.983 523 64 11 6460 6977 4716594 4717096 4.690000e-122 449.0
25 TraesCS4B01G258500 chr5D 82.792 523 65 11 6460 6977 4481375 4481877 2.180000e-120 444.0
26 TraesCS4B01G258500 chr5D 89.565 115 12 0 2726 2840 449691357 449691471 6.890000e-31 147.0
27 TraesCS4B01G258500 chr5D 83.740 123 15 2 6985 7107 4363043 4363160 2.510000e-20 111.0
28 TraesCS4B01G258500 chr5D 83.065 124 15 3 6985 7107 4413790 4413908 3.250000e-19 108.0
29 TraesCS4B01G258500 chr5D 83.065 124 15 3 6985 7107 4482038 4482156 3.250000e-19 108.0
30 TraesCS4B01G258500 chr5D 83.065 124 15 3 6985 7107 4560873 4560991 3.250000e-19 108.0
31 TraesCS4B01G258500 chr5D 83.065 124 15 3 6985 7107 4625663 4625781 3.250000e-19 108.0
32 TraesCS4B01G258500 chr5D 83.065 124 15 3 6985 7107 4717257 4717375 3.250000e-19 108.0
33 TraesCS4B01G258500 chr5D 88.608 79 6 3 8259 8336 70413920 70413996 9.110000e-15 93.5
34 TraesCS4B01G258500 chr2B 84.872 390 48 5 322 710 108200195 108200574 4.830000e-102 383.0
35 TraesCS4B01G258500 chr2B 91.515 165 12 2 48 211 384042503 384042666 8.610000e-55 226.0
36 TraesCS4B01G258500 chr2B 90.506 158 11 3 1 154 711257788 711257945 1.120000e-48 206.0
37 TraesCS4B01G258500 chr2B 91.743 109 9 0 2732 2840 254290506 254290398 1.480000e-32 152.0
38 TraesCS4B01G258500 chr2B 90.698 86 6 2 8259 8343 178054262 178054346 6.990000e-21 113.0
39 TraesCS4B01G258500 chr2B 89.706 68 6 1 8455 8522 736993004 736992938 1.520000e-12 86.1
40 TraesCS4B01G258500 chr2B 94.340 53 0 2 8408 8459 726596805 726596755 2.550000e-10 78.7
41 TraesCS4B01G258500 chr5A 78.763 598 105 16 4690 5276 4009727 4010313 1.740000e-101 381.0
42 TraesCS4B01G258500 chr5A 83.660 306 45 4 6460 6760 4011183 4011488 5.040000e-72 283.0
43 TraesCS4B01G258500 chr5A 83.696 184 29 1 5292 5475 4031460 4031278 1.140000e-38 172.0
44 TraesCS4B01G258500 chr5A 92.063 63 5 0 8456 8518 687155915 687155853 1.180000e-13 89.8
45 TraesCS4B01G258500 chr5A 89.231 65 5 2 8397 8459 482550118 482550182 7.090000e-11 80.5
46 TraesCS4B01G258500 chr1B 83.333 390 54 5 322 710 38933514 38933893 4.900000e-92 350.0
47 TraesCS4B01G258500 chr1B 82.952 393 56 5 322 713 383060052 383059670 2.280000e-90 344.0
48 TraesCS4B01G258500 chr1B 91.720 157 7 4 4 154 383060555 383060399 6.700000e-51 213.0
49 TraesCS4B01G258500 chr1B 94.231 52 2 1 8408 8459 585711329 585711379 2.550000e-10 78.7
50 TraesCS4B01G258500 chr5B 78.393 560 103 15 4672 5223 48419544 48420093 1.760000e-91 348.0
51 TraesCS4B01G258500 chr5B 85.404 322 42 3 6660 6977 48314029 48313709 6.380000e-86 329.0
52 TraesCS4B01G258500 chr5B 84.914 232 31 4 6445 6673 48316507 48316277 1.850000e-56 231.0
53 TraesCS4B01G258500 chr5B 82.759 145 17 6 6981 7123 48313552 48313414 1.160000e-23 122.0
54 TraesCS4B01G258500 chr5B 90.625 64 6 0 8456 8519 689342634 689342697 1.520000e-12 86.1
55 TraesCS4B01G258500 chr5B 97.872 47 1 0 8413 8459 585695655 585695701 1.970000e-11 82.4
56 TraesCS4B01G258500 chr3B 85.169 236 32 3 322 556 517204977 517205210 1.110000e-58 239.0
57 TraesCS4B01G258500 chr3B 91.515 165 12 2 48 211 811736838 811737001 8.610000e-55 226.0
58 TraesCS4B01G258500 chr7B 91.071 168 13 2 48 214 158308781 158308615 8.610000e-55 226.0
59 TraesCS4B01G258500 chr7B 90.476 168 14 2 48 214 711670306 711670140 4.000000e-53 220.0
60 TraesCS4B01G258500 chr7B 86.508 126 15 2 2716 2840 157803101 157802977 4.150000e-28 137.0
61 TraesCS4B01G258500 chr7B 92.188 64 5 0 8454 8517 614866920 614866983 3.280000e-14 91.6
62 TraesCS4B01G258500 chr3D 81.667 240 40 4 472 709 593800122 593800359 6.750000e-46 196.0
63 TraesCS4B01G258500 chr3D 90.476 84 6 2 8261 8343 577147864 577147782 9.040000e-20 110.0
64 TraesCS4B01G258500 chr3D 85.882 85 11 1 8259 8343 61238442 61238359 1.180000e-13 89.8
65 TraesCS4B01G258500 chr3D 92.727 55 0 3 8405 8459 346851809 346851859 9.170000e-10 76.8
66 TraesCS4B01G258500 chr7D 92.593 108 8 0 2732 2839 194080822 194080715 1.150000e-33 156.0
67 TraesCS4B01G258500 chr7D 90.598 117 11 0 2732 2848 485106568 485106452 1.150000e-33 156.0
68 TraesCS4B01G258500 chr1D 90.741 108 10 0 2733 2840 77379734 77379841 2.480000e-30 145.0
69 TraesCS4B01G258500 chr1D 87.500 120 13 2 2723 2840 457853803 457853684 4.150000e-28 137.0
70 TraesCS4B01G258500 chr1D 86.905 84 9 2 8261 8343 35596038 35596120 9.110000e-15 93.5
71 TraesCS4B01G258500 chr1D 85.556 90 11 2 8256 8343 397212194 397212105 9.110000e-15 93.5
72 TraesCS4B01G258500 chr1A 76.166 193 41 5 492 681 487104078 487104268 7.040000e-16 97.1
73 TraesCS4B01G258500 chr1A 97.872 47 1 0 8414 8460 103073905 103073859 1.970000e-11 82.4
74 TraesCS4B01G258500 chr6D 92.188 64 5 0 8456 8519 406113349 406113412 3.280000e-14 91.6
75 TraesCS4B01G258500 chr3A 92.188 64 5 0 8454 8517 86377378 86377441 3.280000e-14 91.6
76 TraesCS4B01G258500 chr7A 92.063 63 5 0 8455 8517 565361966 565361904 1.180000e-13 89.8
77 TraesCS4B01G258500 chr7A 97.917 48 1 0 8412 8459 564832706 564832659 5.480000e-12 84.2
78 TraesCS4B01G258500 chr2A 92.857 56 2 2 8405 8459 766564876 766564822 7.090000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G258500 chr4B 525170602 525179123 8521 False 7912.950000 15738 97.368500 1 8522 2 chr4B.!!$F1 8521
1 TraesCS4B01G258500 chr4D 428521502 428528859 7357 True 5666.000000 5797 94.433500 774 8258 2 chr4D.!!$R3 7484
2 TraesCS4B01G258500 chr4A 37984868 37995225 10357 False 1377.750000 2771 93.900375 1617 8522 8 chr4A.!!$F3 6905
3 TraesCS4B01G258500 chr4A 37978298 37979139 841 False 913.000000 913 86.427000 777 1625 1 chr4A.!!$F1 848
4 TraesCS4B01G258500 chr4A 17754727 17758059 3332 True 286.750000 545 83.381750 4690 7204 4 chr4A.!!$R2 2514
5 TraesCS4B01G258500 chr5D 4413127 4413908 781 False 278.500000 449 83.040000 6460 7107 2 chr5D.!!$F6 647
6 TraesCS4B01G258500 chr5D 4716594 4717375 781 False 278.500000 449 83.024000 6460 7107 2 chr5D.!!$F8 647
7 TraesCS4B01G258500 chr5D 4481375 4482156 781 False 276.000000 444 82.928500 6460 7107 2 chr5D.!!$F7 647
8 TraesCS4B01G258500 chr5A 4009727 4011488 1761 False 332.000000 381 81.211500 4690 6760 2 chr5A.!!$F2 2070
9 TraesCS4B01G258500 chr1B 383059670 383060555 885 True 278.500000 344 87.336000 4 713 2 chr1B.!!$R1 709
10 TraesCS4B01G258500 chr5B 48419544 48420093 549 False 348.000000 348 78.393000 4672 5223 1 chr5B.!!$F1 551
11 TraesCS4B01G258500 chr5B 48313414 48316507 3093 True 227.333333 329 84.359000 6445 7123 3 chr5B.!!$R1 678

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
896 1105 0.035056 AGTTGAGATTGAAGGGGCGG 60.035 55.000 0.00 0.00 0.00 6.13 F
1108 1317 0.254462 GGAGGAAGGGCAGGAAGAAG 59.746 60.000 0.00 0.00 0.00 2.85 F
1262 1477 0.264657 TCTCCCCATCCTCCGAATCA 59.735 55.000 0.00 0.00 0.00 2.57 F
1366 1590 0.891904 TGAGCACTTTAAACCCCCGC 60.892 55.000 0.00 0.00 0.00 6.13 F
1491 1715 0.929244 ATATGCTGCCCTCTGGGTTT 59.071 50.000 4.42 0.00 46.51 3.27 F
1498 1725 3.019564 CTGCCCTCTGGGTTTAAGATTG 58.980 50.000 4.42 0.00 46.51 2.67 F
2871 3118 3.380479 TGTATATACCCTGTTGCGAGC 57.620 47.619 10.38 0.00 0.00 5.03 F
3789 4154 2.912956 AGATGGCACTAGTGAAAAGGGA 59.087 45.455 27.08 1.57 0.00 4.20 F
4406 6961 1.630369 AGCTGGGCATGTTGAGACTTA 59.370 47.619 0.00 0.00 0.00 2.24 F
5648 9715 0.657840 ATTTCGCTTCGTATGCCTGC 59.342 50.000 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1873 2111 0.593128 GTTGCACACAGGGTAAGCAG 59.407 55.000 0.00 0.00 36.47 4.24 R
2588 2835 2.562298 GGTTGAATGGATGAACAAGCCA 59.438 45.455 0.00 0.00 35.59 4.75 R
2645 2892 6.013725 AGAGGTAGTCACATAAATTCCACACA 60.014 38.462 0.00 0.00 0.00 3.72 R
3233 3596 6.666113 TGGTTAACTAGACATACACATCAGGA 59.334 38.462 5.42 0.00 0.00 3.86 R
3477 3840 2.957006 GGAAGTATACTCTTCTCCGCCA 59.043 50.000 5.70 0.00 42.19 5.69 R
3699 4063 6.992063 ACATTCTGAGTAATGCCTACAAAG 57.008 37.500 0.00 0.00 39.93 2.77 R
4384 6939 1.065854 AGTCTCAACATGCCCAGCTAC 60.066 52.381 0.00 0.00 0.00 3.58 R
4819 8531 1.153958 GCTTGATGGCCTCAAACGC 60.154 57.895 15.54 13.10 43.20 4.84 R
6092 10159 0.440758 CCGCATTGCAGCAAATTGTG 59.559 50.000 12.97 13.17 0.00 3.33 R
7730 15256 0.033781 TTCAAGCTGCCAAATGTGCC 59.966 50.000 0.00 0.00 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 6.149973 CCATCTACAACAGTCACATGTCAATT 59.850 38.462 0.00 0.00 31.50 2.32
36 37 9.114952 TCTACAACAGTCACATGTCAATTTTTA 57.885 29.630 0.00 0.00 31.50 1.52
39 40 9.248291 ACAACAGTCACATGTCAATTTTTAATC 57.752 29.630 0.00 0.00 31.50 1.75
40 41 9.467258 CAACAGTCACATGTCAATTTTTAATCT 57.533 29.630 0.00 0.00 31.50 2.40
78 83 8.166061 ACTAAGCATACATCAATCCATACCAAT 58.834 33.333 0.00 0.00 0.00 3.16
166 171 7.792374 TTTTTGCTAAATGTTGCATACCAAA 57.208 28.000 0.00 0.00 39.07 3.28
202 207 4.548494 TGACATCAATCACATGTTTGCAC 58.452 39.130 0.00 0.00 34.49 4.57
215 247 2.030363 TGTTTGCACCATCGAAACCATC 60.030 45.455 0.00 0.00 0.00 3.51
219 251 1.750778 GCACCATCGAAACCATCCAAT 59.249 47.619 0.00 0.00 0.00 3.16
226 258 4.788925 TCGAAACCATCCAATATTCCCT 57.211 40.909 0.00 0.00 0.00 4.20
236 268 2.481795 CCAATATTCCCTTGCTTTGCCG 60.482 50.000 0.00 0.00 0.00 5.69
237 269 1.402787 ATATTCCCTTGCTTTGCCGG 58.597 50.000 0.00 0.00 0.00 6.13
257 395 2.764547 GGAGGGAAGGAGGGTCGG 60.765 72.222 0.00 0.00 0.00 4.79
259 397 3.986116 GAGGGAAGGAGGGTCGGCT 62.986 68.421 0.00 0.00 0.00 5.52
262 400 3.003763 GAAGGAGGGTCGGCTGGT 61.004 66.667 0.00 0.00 0.00 4.00
292 479 3.449227 CGCGTCCTACTGCAGGGA 61.449 66.667 19.93 13.26 45.58 4.20
343 544 2.844839 GGCGTCATAGGGGCCTCT 60.845 66.667 11.71 11.71 43.52 3.69
359 560 2.105128 CTCGCCGGTGGATCTGAC 59.895 66.667 16.49 0.00 0.00 3.51
360 561 2.678580 TCGCCGGTGGATCTGACA 60.679 61.111 16.49 0.00 0.00 3.58
364 565 1.292223 CCGGTGGATCTGACAACGT 59.708 57.895 7.05 0.00 46.90 3.99
371 572 3.310860 ATCTGACAACGTCGGGGCC 62.311 63.158 0.00 0.00 39.23 5.80
407 608 2.511600 CGCCAAACCCTAGCTCGG 60.512 66.667 0.00 0.00 0.00 4.63
416 617 2.759973 CTAGCTCGGGGTGGCTGA 60.760 66.667 0.00 0.00 39.31 4.26
417 618 2.759973 TAGCTCGGGGTGGCTGAG 60.760 66.667 0.00 0.00 39.31 3.35
418 619 3.296842 TAGCTCGGGGTGGCTGAGA 62.297 63.158 0.00 0.00 39.31 3.27
419 620 4.459089 GCTCGGGGTGGCTGAGAC 62.459 72.222 0.00 0.00 31.31 3.36
420 621 4.135153 CTCGGGGTGGCTGAGACG 62.135 72.222 0.00 0.00 31.31 4.18
421 622 4.671590 TCGGGGTGGCTGAGACGA 62.672 66.667 0.00 0.00 0.00 4.20
422 623 3.461773 CGGGGTGGCTGAGACGAT 61.462 66.667 0.00 0.00 0.00 3.73
423 624 2.187946 GGGGTGGCTGAGACGATG 59.812 66.667 0.00 0.00 0.00 3.84
425 626 2.660064 GGGTGGCTGAGACGATGGT 61.660 63.158 0.00 0.00 0.00 3.55
430 632 0.320771 GGCTGAGACGATGGTTGTGT 60.321 55.000 0.00 0.00 0.00 3.72
435 637 1.072505 GACGATGGTTGTGTGGGGT 59.927 57.895 0.00 0.00 0.00 4.95
439 641 0.893727 GATGGTTGTGTGGGGTGGAC 60.894 60.000 0.00 0.00 0.00 4.02
507 709 3.252284 CCCTGGTGGCACTCTGGT 61.252 66.667 18.45 0.00 0.00 4.00
508 710 2.348998 CCTGGTGGCACTCTGGTC 59.651 66.667 18.45 0.00 0.00 4.02
546 748 6.207691 CAATAGGGGTATTGGTTCAAAGTG 57.792 41.667 0.00 0.00 34.65 3.16
567 769 5.009310 AGTGAACCGTTTTATTTTGAGGGAC 59.991 40.000 0.00 0.00 0.00 4.46
570 772 3.824443 ACCGTTTTATTTTGAGGGACTGG 59.176 43.478 0.00 0.00 41.55 4.00
572 774 3.506067 CGTTTTATTTTGAGGGACTGGCT 59.494 43.478 0.00 0.00 41.55 4.75
579 781 5.772393 TTTTGAGGGACTGGCTAGAATTA 57.228 39.130 3.17 0.00 41.55 1.40
580 782 5.975988 TTTGAGGGACTGGCTAGAATTAT 57.024 39.130 3.17 0.00 41.55 1.28
581 783 4.963318 TGAGGGACTGGCTAGAATTATG 57.037 45.455 3.17 0.00 41.55 1.90
583 785 4.590647 TGAGGGACTGGCTAGAATTATGAG 59.409 45.833 3.17 0.00 41.55 2.90
584 786 4.820775 AGGGACTGGCTAGAATTATGAGA 58.179 43.478 3.17 0.00 37.18 3.27
585 787 5.219739 AGGGACTGGCTAGAATTATGAGAA 58.780 41.667 3.17 0.00 37.18 2.87
587 789 6.331307 AGGGACTGGCTAGAATTATGAGAATT 59.669 38.462 3.17 0.00 37.18 2.17
588 790 6.429385 GGGACTGGCTAGAATTATGAGAATTG 59.571 42.308 3.17 0.00 0.00 2.32
589 791 6.072783 GGACTGGCTAGAATTATGAGAATTGC 60.073 42.308 3.17 0.00 0.00 3.56
590 792 5.468072 ACTGGCTAGAATTATGAGAATTGCG 59.532 40.000 3.17 0.00 0.00 4.85
591 793 5.610398 TGGCTAGAATTATGAGAATTGCGA 58.390 37.500 0.00 0.00 0.00 5.10
592 794 6.054941 TGGCTAGAATTATGAGAATTGCGAA 58.945 36.000 0.00 0.00 0.00 4.70
593 795 6.203530 TGGCTAGAATTATGAGAATTGCGAAG 59.796 38.462 0.00 0.00 0.00 3.79
594 796 6.203723 GGCTAGAATTATGAGAATTGCGAAGT 59.796 38.462 0.00 0.00 0.00 3.01
595 797 7.254932 GGCTAGAATTATGAGAATTGCGAAGTT 60.255 37.037 0.00 0.00 0.00 2.66
596 798 8.125448 GCTAGAATTATGAGAATTGCGAAGTTT 58.875 33.333 0.00 0.00 0.00 2.66
597 799 9.643652 CTAGAATTATGAGAATTGCGAAGTTTC 57.356 33.333 0.00 0.00 0.00 2.78
616 818 9.141400 GAAGTTTCGATGATTCTAAACTACACT 57.859 33.333 6.19 0.00 43.32 3.55
617 819 8.467402 AGTTTCGATGATTCTAAACTACACTG 57.533 34.615 4.42 0.00 42.70 3.66
618 820 8.088981 AGTTTCGATGATTCTAAACTACACTGT 58.911 33.333 4.42 0.00 42.70 3.55
619 821 9.350357 GTTTCGATGATTCTAAACTACACTGTA 57.650 33.333 0.00 0.00 35.64 2.74
620 822 9.917129 TTTCGATGATTCTAAACTACACTGTAA 57.083 29.630 0.00 0.00 0.00 2.41
627 829 9.262472 GATTCTAAACTACACTGTAATTTTGCG 57.738 33.333 1.22 0.00 0.00 4.85
628 830 7.949903 TCTAAACTACACTGTAATTTTGCGA 57.050 32.000 1.22 0.00 0.00 5.10
629 831 8.542497 TCTAAACTACACTGTAATTTTGCGAT 57.458 30.769 1.22 0.00 0.00 4.58
630 832 9.642327 TCTAAACTACACTGTAATTTTGCGATA 57.358 29.630 1.22 0.00 0.00 2.92
637 839 8.238481 ACACTGTAATTTTGCGATAATTTTGG 57.762 30.769 0.00 0.00 0.00 3.28
638 840 8.085296 ACACTGTAATTTTGCGATAATTTTGGA 58.915 29.630 0.00 0.00 0.00 3.53
639 841 8.372521 CACTGTAATTTTGCGATAATTTTGGAC 58.627 33.333 0.00 0.00 0.00 4.02
640 842 8.085296 ACTGTAATTTTGCGATAATTTTGGACA 58.915 29.630 0.00 0.00 0.00 4.02
641 843 8.818141 TGTAATTTTGCGATAATTTTGGACAA 57.182 26.923 0.00 0.00 0.00 3.18
642 844 8.920665 TGTAATTTTGCGATAATTTTGGACAAG 58.079 29.630 0.00 0.00 0.00 3.16
643 845 7.961325 AATTTTGCGATAATTTTGGACAAGT 57.039 28.000 0.00 0.00 0.00 3.16
644 846 7.581011 ATTTTGCGATAATTTTGGACAAGTC 57.419 32.000 0.00 0.00 0.00 3.01
645 847 5.697473 TTGCGATAATTTTGGACAAGTCA 57.303 34.783 2.29 0.00 0.00 3.41
646 848 5.895636 TGCGATAATTTTGGACAAGTCAT 57.104 34.783 2.29 0.00 0.00 3.06
647 849 5.639757 TGCGATAATTTTGGACAAGTCATG 58.360 37.500 2.29 0.00 0.00 3.07
648 850 5.414144 TGCGATAATTTTGGACAAGTCATGA 59.586 36.000 2.29 0.00 0.00 3.07
649 851 6.072230 TGCGATAATTTTGGACAAGTCATGAA 60.072 34.615 0.00 0.00 0.00 2.57
650 852 6.806249 GCGATAATTTTGGACAAGTCATGAAA 59.194 34.615 0.00 0.89 0.00 2.69
651 853 7.201350 GCGATAATTTTGGACAAGTCATGAAAC 60.201 37.037 0.00 0.00 0.00 2.78
652 854 7.807433 CGATAATTTTGGACAAGTCATGAAACA 59.193 33.333 0.00 0.00 0.00 2.83
653 855 9.132521 GATAATTTTGGACAAGTCATGAAACAG 57.867 33.333 0.00 0.00 0.00 3.16
654 856 6.713762 ATTTTGGACAAGTCATGAAACAGA 57.286 33.333 0.00 0.00 0.00 3.41
655 857 5.756195 TTTGGACAAGTCATGAAACAGAG 57.244 39.130 0.00 0.00 0.00 3.35
656 858 4.687901 TGGACAAGTCATGAAACAGAGA 57.312 40.909 0.00 0.00 0.00 3.10
657 859 5.233083 TGGACAAGTCATGAAACAGAGAT 57.767 39.130 0.00 0.00 0.00 2.75
658 860 6.358974 TGGACAAGTCATGAAACAGAGATA 57.641 37.500 0.00 0.00 0.00 1.98
659 861 6.768483 TGGACAAGTCATGAAACAGAGATAA 58.232 36.000 0.00 0.00 0.00 1.75
660 862 6.875726 TGGACAAGTCATGAAACAGAGATAAG 59.124 38.462 0.00 0.00 0.00 1.73
661 863 6.876257 GGACAAGTCATGAAACAGAGATAAGT 59.124 38.462 0.00 0.00 0.00 2.24
662 864 7.389053 GGACAAGTCATGAAACAGAGATAAGTT 59.611 37.037 0.00 0.00 0.00 2.66
663 865 8.316640 ACAAGTCATGAAACAGAGATAAGTTC 57.683 34.615 0.00 0.00 0.00 3.01
664 866 8.153550 ACAAGTCATGAAACAGAGATAAGTTCT 58.846 33.333 0.00 0.00 37.41 3.01
665 867 8.997323 CAAGTCATGAAACAGAGATAAGTTCTT 58.003 33.333 0.00 0.00 33.74 2.52
666 868 9.566432 AAGTCATGAAACAGAGATAAGTTCTTT 57.434 29.630 0.00 0.00 33.74 2.52
667 869 9.566432 AGTCATGAAACAGAGATAAGTTCTTTT 57.434 29.630 0.00 0.00 33.74 2.27
668 870 9.604626 GTCATGAAACAGAGATAAGTTCTTTTG 57.395 33.333 0.00 0.00 33.74 2.44
669 871 9.342308 TCATGAAACAGAGATAAGTTCTTTTGT 57.658 29.630 0.00 0.00 35.37 2.83
670 872 9.390795 CATGAAACAGAGATAAGTTCTTTTGTG 57.609 33.333 0.00 0.00 34.61 3.33
671 873 8.731275 TGAAACAGAGATAAGTTCTTTTGTGA 57.269 30.769 0.00 0.00 34.61 3.58
672 874 9.342308 TGAAACAGAGATAAGTTCTTTTGTGAT 57.658 29.630 0.00 0.00 34.61 3.06
683 885 7.637709 AGTTCTTTTGTGATTTTAATTCGCC 57.362 32.000 0.00 0.00 0.00 5.54
684 886 6.362283 AGTTCTTTTGTGATTTTAATTCGCCG 59.638 34.615 0.00 0.00 0.00 6.46
685 887 6.003234 TCTTTTGTGATTTTAATTCGCCGA 57.997 33.333 0.00 0.00 0.00 5.54
686 888 6.439599 TCTTTTGTGATTTTAATTCGCCGAA 58.560 32.000 0.33 0.33 0.00 4.30
687 889 6.361214 TCTTTTGTGATTTTAATTCGCCGAAC 59.639 34.615 0.00 0.00 0.00 3.95
688 890 4.750952 TGTGATTTTAATTCGCCGAACA 57.249 36.364 0.00 0.00 0.00 3.18
689 891 4.717991 TGTGATTTTAATTCGCCGAACAG 58.282 39.130 0.00 0.00 0.00 3.16
690 892 4.214545 TGTGATTTTAATTCGCCGAACAGT 59.785 37.500 0.00 0.00 0.00 3.55
691 893 5.408909 TGTGATTTTAATTCGCCGAACAGTA 59.591 36.000 0.00 0.00 0.00 2.74
692 894 6.073167 TGTGATTTTAATTCGCCGAACAGTAA 60.073 34.615 0.00 0.00 0.00 2.24
693 895 6.964934 GTGATTTTAATTCGCCGAACAGTAAT 59.035 34.615 0.00 0.24 0.00 1.89
694 896 7.483691 GTGATTTTAATTCGCCGAACAGTAATT 59.516 33.333 0.00 0.00 0.00 1.40
695 897 7.694784 TGATTTTAATTCGCCGAACAGTAATTC 59.305 33.333 0.00 2.06 0.00 2.17
696 898 6.730960 TTTAATTCGCCGAACAGTAATTCT 57.269 33.333 0.00 0.00 0.00 2.40
697 899 6.730960 TTAATTCGCCGAACAGTAATTCTT 57.269 33.333 0.00 0.00 0.00 2.52
698 900 4.859629 ATTCGCCGAACAGTAATTCTTC 57.140 40.909 0.00 0.00 0.00 2.87
699 901 3.306917 TCGCCGAACAGTAATTCTTCA 57.693 42.857 0.00 0.00 0.00 3.02
700 902 2.991190 TCGCCGAACAGTAATTCTTCAC 59.009 45.455 0.00 0.00 0.00 3.18
701 903 2.734606 CGCCGAACAGTAATTCTTCACA 59.265 45.455 0.00 0.00 0.00 3.58
702 904 3.185594 CGCCGAACAGTAATTCTTCACAA 59.814 43.478 0.00 0.00 0.00 3.33
703 905 4.142902 CGCCGAACAGTAATTCTTCACAAT 60.143 41.667 0.00 0.00 0.00 2.71
704 906 5.616866 CGCCGAACAGTAATTCTTCACAATT 60.617 40.000 0.00 0.00 0.00 2.32
705 907 5.569059 GCCGAACAGTAATTCTTCACAATTG 59.431 40.000 3.24 3.24 0.00 2.32
706 908 6.567701 GCCGAACAGTAATTCTTCACAATTGA 60.568 38.462 13.59 0.00 0.00 2.57
707 909 7.017645 CCGAACAGTAATTCTTCACAATTGAG 58.982 38.462 13.59 4.14 31.71 3.02
708 910 6.521133 CGAACAGTAATTCTTCACAATTGAGC 59.479 38.462 13.59 0.00 31.71 4.26
709 911 6.259550 ACAGTAATTCTTCACAATTGAGCC 57.740 37.500 13.59 0.00 31.71 4.70
710 912 5.183904 ACAGTAATTCTTCACAATTGAGCCC 59.816 40.000 13.59 0.00 31.71 5.19
711 913 5.183713 CAGTAATTCTTCACAATTGAGCCCA 59.816 40.000 13.59 0.00 31.71 5.36
712 914 5.774690 AGTAATTCTTCACAATTGAGCCCAA 59.225 36.000 13.59 0.00 36.61 4.12
713 915 4.525912 ATTCTTCACAATTGAGCCCAAC 57.474 40.909 13.59 0.00 34.72 3.77
714 916 3.228188 TCTTCACAATTGAGCCCAACT 57.772 42.857 13.59 0.00 34.72 3.16
715 917 2.886523 TCTTCACAATTGAGCCCAACTG 59.113 45.455 13.59 0.00 35.78 3.16
716 918 1.619654 TCACAATTGAGCCCAACTGG 58.380 50.000 13.59 0.00 34.13 4.00
725 927 4.153957 CCCAACTGGCCCTAGTCT 57.846 61.111 0.00 0.00 0.00 3.24
726 928 1.604378 CCCAACTGGCCCTAGTCTG 59.396 63.158 0.00 0.00 0.00 3.51
727 929 1.078143 CCAACTGGCCCTAGTCTGC 60.078 63.158 0.00 0.00 0.00 4.26
728 930 1.557269 CCAACTGGCCCTAGTCTGCT 61.557 60.000 0.00 0.00 0.00 4.24
729 931 0.107945 CAACTGGCCCTAGTCTGCTC 60.108 60.000 0.00 0.00 0.00 4.26
730 932 0.545309 AACTGGCCCTAGTCTGCTCA 60.545 55.000 0.00 0.00 0.00 4.26
731 933 0.545309 ACTGGCCCTAGTCTGCTCAA 60.545 55.000 0.00 0.00 0.00 3.02
732 934 0.615331 CTGGCCCTAGTCTGCTCAAA 59.385 55.000 0.00 0.00 0.00 2.69
733 935 1.003580 CTGGCCCTAGTCTGCTCAAAA 59.996 52.381 0.00 0.00 0.00 2.44
734 936 1.003580 TGGCCCTAGTCTGCTCAAAAG 59.996 52.381 0.00 0.00 0.00 2.27
735 937 1.279271 GGCCCTAGTCTGCTCAAAAGA 59.721 52.381 0.00 0.00 0.00 2.52
736 938 2.290323 GGCCCTAGTCTGCTCAAAAGAA 60.290 50.000 0.00 0.00 0.00 2.52
737 939 2.744741 GCCCTAGTCTGCTCAAAAGAAC 59.255 50.000 0.00 0.00 0.00 3.01
738 940 3.558109 GCCCTAGTCTGCTCAAAAGAACT 60.558 47.826 0.00 0.00 0.00 3.01
739 941 4.249661 CCCTAGTCTGCTCAAAAGAACTC 58.750 47.826 0.00 0.00 0.00 3.01
740 942 3.923461 CCTAGTCTGCTCAAAAGAACTCG 59.077 47.826 0.00 0.00 0.00 4.18
741 943 3.460857 AGTCTGCTCAAAAGAACTCGT 57.539 42.857 0.00 0.00 0.00 4.18
742 944 3.126831 AGTCTGCTCAAAAGAACTCGTG 58.873 45.455 0.00 0.00 0.00 4.35
743 945 1.867233 TCTGCTCAAAAGAACTCGTGC 59.133 47.619 0.00 0.00 0.00 5.34
744 946 1.599071 CTGCTCAAAAGAACTCGTGCA 59.401 47.619 0.00 0.00 0.00 4.57
745 947 2.013400 TGCTCAAAAGAACTCGTGCAA 58.987 42.857 0.00 0.00 0.00 4.08
746 948 2.618241 TGCTCAAAAGAACTCGTGCAAT 59.382 40.909 0.00 0.00 0.00 3.56
747 949 3.066621 TGCTCAAAAGAACTCGTGCAATT 59.933 39.130 0.00 0.00 0.00 2.32
748 950 4.044426 GCTCAAAAGAACTCGTGCAATTT 58.956 39.130 0.00 0.00 0.00 1.82
749 951 5.212194 GCTCAAAAGAACTCGTGCAATTTA 58.788 37.500 0.00 0.00 0.00 1.40
750 952 5.685511 GCTCAAAAGAACTCGTGCAATTTAA 59.314 36.000 0.00 0.00 0.00 1.52
751 953 6.363357 GCTCAAAAGAACTCGTGCAATTTAAT 59.637 34.615 0.00 0.00 0.00 1.40
752 954 7.537306 GCTCAAAAGAACTCGTGCAATTTAATA 59.463 33.333 0.00 0.00 0.00 0.98
753 955 9.393249 CTCAAAAGAACTCGTGCAATTTAATAA 57.607 29.630 0.00 0.00 0.00 1.40
754 956 9.906660 TCAAAAGAACTCGTGCAATTTAATAAT 57.093 25.926 0.00 0.00 0.00 1.28
781 983 1.807814 AGATCTTTACCGATGGGCCT 58.192 50.000 4.53 0.00 36.48 5.19
784 986 0.748450 TCTTTACCGATGGGCCTACG 59.252 55.000 4.53 10.52 36.48 3.51
792 994 0.759346 GATGGGCCTACGGAACAGAT 59.241 55.000 4.53 0.00 0.00 2.90
794 996 1.868713 TGGGCCTACGGAACAGATAA 58.131 50.000 4.53 0.00 0.00 1.75
797 999 2.609737 GGGCCTACGGAACAGATAATCG 60.610 54.545 0.84 0.00 0.00 3.34
798 1000 2.295349 GGCCTACGGAACAGATAATCGA 59.705 50.000 0.00 0.00 0.00 3.59
806 1008 0.102481 ACAGATAATCGAAGCGGCGT 59.898 50.000 9.37 0.00 0.00 5.68
807 1009 0.504384 CAGATAATCGAAGCGGCGTG 59.496 55.000 9.37 0.00 0.00 5.34
808 1010 0.597637 AGATAATCGAAGCGGCGTGG 60.598 55.000 9.37 0.00 0.00 4.94
835 1037 4.954118 AGGCGGTCCCACCTGTCA 62.954 66.667 0.00 0.00 35.66 3.58
840 1042 1.901085 GGTCCCACCTGTCAGCTAG 59.099 63.158 0.00 0.00 34.73 3.42
869 1072 2.368311 TTTTTACTGGAAACCCGGCT 57.632 45.000 0.00 0.00 33.23 5.52
875 1078 0.598065 CTGGAAACCCGGCTTCTTTG 59.402 55.000 12.65 0.00 0.00 2.77
885 1090 3.077359 CCGGCTTCTTTGAAGTTGAGAT 58.923 45.455 8.78 0.00 0.00 2.75
896 1105 0.035056 AGTTGAGATTGAAGGGGCGG 60.035 55.000 0.00 0.00 0.00 6.13
897 1106 1.378514 TTGAGATTGAAGGGGCGGC 60.379 57.895 0.00 0.00 0.00 6.53
898 1107 2.517166 GAGATTGAAGGGGCGGCC 60.517 66.667 22.00 22.00 0.00 6.13
899 1108 4.489771 AGATTGAAGGGGCGGCCG 62.490 66.667 24.05 24.05 0.00 6.13
940 1149 2.204461 TCGCAAGAGGTTCCGTCCA 61.204 57.895 0.00 0.00 45.01 4.02
949 1158 3.948719 TTCCGTCCACTGCCACCC 61.949 66.667 0.00 0.00 0.00 4.61
981 1190 0.397254 AGAGGGTGATTCGTCGGGAT 60.397 55.000 0.00 0.00 0.00 3.85
987 1196 0.686441 TGATTCGTCGGGATCCCAGT 60.686 55.000 30.42 7.62 35.37 4.00
988 1197 0.464452 GATTCGTCGGGATCCCAGTT 59.536 55.000 30.42 12.40 35.37 3.16
1012 1221 3.096092 AGAAAGAAGATGAGCTCGGACT 58.904 45.455 9.64 5.30 0.00 3.85
1082 1291 1.484240 CCTGGCGAAGAAGAGGAATCT 59.516 52.381 0.00 0.00 0.00 2.40
1088 1297 2.102252 CGAAGAAGAGGAATCTGGGGAG 59.898 54.545 0.00 0.00 0.00 4.30
1097 1306 0.327964 AATCTGGGGAGGGAGGAAGG 60.328 60.000 0.00 0.00 0.00 3.46
1098 1307 2.277126 ATCTGGGGAGGGAGGAAGGG 62.277 65.000 0.00 0.00 0.00 3.95
1099 1308 4.760220 TGGGGAGGGAGGAAGGGC 62.760 72.222 0.00 0.00 0.00 5.19
1100 1309 4.760220 GGGGAGGGAGGAAGGGCA 62.760 72.222 0.00 0.00 0.00 5.36
1101 1310 3.093172 GGGAGGGAGGAAGGGCAG 61.093 72.222 0.00 0.00 0.00 4.85
1102 1311 3.093172 GGAGGGAGGAAGGGCAGG 61.093 72.222 0.00 0.00 0.00 4.85
1103 1312 2.041265 GAGGGAGGAAGGGCAGGA 59.959 66.667 0.00 0.00 0.00 3.86
1104 1313 1.616628 GAGGGAGGAAGGGCAGGAA 60.617 63.158 0.00 0.00 0.00 3.36
1105 1314 1.617839 AGGGAGGAAGGGCAGGAAG 60.618 63.158 0.00 0.00 0.00 3.46
1106 1315 1.616628 GGGAGGAAGGGCAGGAAGA 60.617 63.158 0.00 0.00 0.00 2.87
1107 1316 1.208165 GGGAGGAAGGGCAGGAAGAA 61.208 60.000 0.00 0.00 0.00 2.52
1108 1317 0.254462 GGAGGAAGGGCAGGAAGAAG 59.746 60.000 0.00 0.00 0.00 2.85
1147 1362 0.913934 TGCTCTACTTCCCATGCCCA 60.914 55.000 0.00 0.00 0.00 5.36
1206 1421 0.819582 CCGCCAAGATTGCAAAGGAT 59.180 50.000 1.71 0.00 0.00 3.24
1210 1425 4.493547 CGCCAAGATTGCAAAGGATAAAA 58.506 39.130 1.71 0.00 0.00 1.52
1226 1441 4.815846 GGATAAAATGGATGCCGCAAAATT 59.184 37.500 0.00 0.00 0.00 1.82
1232 1447 2.024414 GGATGCCGCAAAATTAGGTCT 58.976 47.619 0.00 0.00 0.00 3.85
1256 1471 1.057275 GGTTCCTCTCCCCATCCTCC 61.057 65.000 0.00 0.00 0.00 4.30
1262 1477 0.264657 TCTCCCCATCCTCCGAATCA 59.735 55.000 0.00 0.00 0.00 2.57
1263 1478 1.131638 CTCCCCATCCTCCGAATCAA 58.868 55.000 0.00 0.00 0.00 2.57
1264 1479 1.701847 CTCCCCATCCTCCGAATCAAT 59.298 52.381 0.00 0.00 0.00 2.57
1269 1484 4.147321 CCCATCCTCCGAATCAATCAATT 58.853 43.478 0.00 0.00 0.00 2.32
1273 1488 7.362401 CCCATCCTCCGAATCAATCAATTAATC 60.362 40.741 0.00 0.00 0.00 1.75
1274 1489 7.175467 CCATCCTCCGAATCAATCAATTAATCA 59.825 37.037 0.00 0.00 0.00 2.57
1276 1491 6.486657 TCCTCCGAATCAATCAATTAATCACC 59.513 38.462 0.00 0.00 0.00 4.02
1321 1544 1.055849 TGTTCTTGTAGCAGCTCCCA 58.944 50.000 0.00 0.00 0.00 4.37
1322 1545 1.630369 TGTTCTTGTAGCAGCTCCCAT 59.370 47.619 0.00 0.00 0.00 4.00
1366 1590 0.891904 TGAGCACTTTAAACCCCCGC 60.892 55.000 0.00 0.00 0.00 6.13
1380 1604 2.203280 CCGCCCAGGTTTCACACA 60.203 61.111 0.00 0.00 34.51 3.72
1382 1606 2.892334 CGCCCAGGTTTCACACACG 61.892 63.158 0.00 0.00 0.00 4.49
1383 1607 2.551912 GCCCAGGTTTCACACACGG 61.552 63.158 0.00 0.00 0.00 4.94
1491 1715 0.929244 ATATGCTGCCCTCTGGGTTT 59.071 50.000 4.42 0.00 46.51 3.27
1498 1725 3.019564 CTGCCCTCTGGGTTTAAGATTG 58.980 50.000 4.42 0.00 46.51 2.67
1537 1764 8.372459 ACCAAATGCGTGGATAGATTTACTATA 58.628 33.333 7.81 0.00 41.32 1.31
1538 1765 9.383519 CCAAATGCGTGGATAGATTTACTATAT 57.616 33.333 0.00 0.00 41.32 0.86
1541 1768 9.751542 AATGCGTGGATAGATTTACTATATAGC 57.248 33.333 9.78 0.00 41.32 2.97
1542 1769 7.415229 TGCGTGGATAGATTTACTATATAGCG 58.585 38.462 9.78 2.04 41.32 4.26
1544 1771 7.914346 GCGTGGATAGATTTACTATATAGCGTT 59.086 37.037 9.78 0.00 41.32 4.84
1600 1829 7.905604 ATCTTCAAAGAAATCGTGTGATGTA 57.094 32.000 0.00 0.00 38.77 2.29
1601 1830 7.905604 TCTTCAAAGAAATCGTGTGATGTAT 57.094 32.000 0.00 0.00 34.24 2.29
1883 2121 7.606839 GTGACTATTAGTTTTTCTGCTTACCCT 59.393 37.037 0.00 0.00 0.00 4.34
1908 2146 5.175491 GTGTGCAACTGTTGTCCATTTAATG 59.825 40.000 20.57 0.00 38.04 1.90
2104 2343 3.433031 CGATGGGTCAGGCATAAACCTTA 60.433 47.826 2.57 0.00 38.26 2.69
2588 2835 5.836024 TGAGGAGTTAAACTATGGTGGTT 57.164 39.130 0.00 0.00 0.00 3.67
2666 2913 5.163754 GCCTGTGTGGAATTTATGTGACTAC 60.164 44.000 0.00 0.00 38.35 2.73
2871 3118 3.380479 TGTATATACCCTGTTGCGAGC 57.620 47.619 10.38 0.00 0.00 5.03
3065 3428 7.226720 TGCTTGAACGTCTCTTTCTTTTCTTAT 59.773 33.333 0.00 0.00 0.00 1.73
3066 3429 8.709646 GCTTGAACGTCTCTTTCTTTTCTTATA 58.290 33.333 0.00 0.00 0.00 0.98
3276 3639 7.345392 AGTTAACCATGGCCATTCATTTTCTAT 59.655 33.333 17.92 0.00 0.00 1.98
3477 3840 4.437682 TTCTCCTGTCAATGTCTGGTTT 57.562 40.909 3.76 0.00 0.00 3.27
3742 4107 9.917887 AGAATGTAATCTGATTCTTTCTCCAAT 57.082 29.630 6.10 0.00 35.78 3.16
3789 4154 2.912956 AGATGGCACTAGTGAAAAGGGA 59.087 45.455 27.08 1.57 0.00 4.20
3913 4278 3.513662 GAAGAAGTTCTTCGGCTAGGAC 58.486 50.000 25.68 4.90 42.78 3.85
3971 4336 3.647113 AGAGCTGCATATCAGAATCCAGT 59.353 43.478 1.02 0.00 45.72 4.00
4053 4418 9.256477 GATGACGAGGTAATATTTATTGTCACA 57.744 33.333 14.63 0.00 36.74 3.58
4406 6961 1.630369 AGCTGGGCATGTTGAGACTTA 59.370 47.619 0.00 0.00 0.00 2.24
4460 7015 7.872138 TGGAAAGAAGATGATTACCTTACCAT 58.128 34.615 0.00 0.00 0.00 3.55
4503 8206 2.135139 TCGTTTACAGCTCAAGTGCAG 58.865 47.619 0.00 0.00 34.99 4.41
4540 8243 4.611943 AGATCAATTGTGATAGTCGTCCG 58.388 43.478 5.13 0.00 44.83 4.79
4549 8252 4.082081 TGTGATAGTCGTCCGGTTTGTATT 60.082 41.667 0.00 0.00 0.00 1.89
4559 8262 6.036300 TCGTCCGGTTTGTATTGAAATATGTC 59.964 38.462 0.00 0.00 0.00 3.06
4614 8318 7.762382 TCCTTTTTGAGTCTTTTTCAACTCTC 58.238 34.615 4.37 0.00 41.97 3.20
4646 8354 8.548025 TGTATCATTCCCTTTGAACTCTATTCA 58.452 33.333 0.00 0.00 35.31 2.57
4652 8360 7.466746 TCCCTTTGAACTCTATTCAAATTGG 57.533 36.000 13.56 15.49 44.41 3.16
4663 8371 8.480501 ACTCTATTCAAATTGGCATATTGCTTT 58.519 29.630 7.64 0.00 44.28 3.51
4670 8378 8.259411 TCAAATTGGCATATTGCTTTCTATTGT 58.741 29.630 7.64 0.00 44.28 2.71
4671 8379 8.885722 CAAATTGGCATATTGCTTTCTATTGTT 58.114 29.630 0.00 0.00 44.28 2.83
4706 8414 6.479884 ACATGCTAGAAAGAAGTTGGATTCT 58.520 36.000 0.00 0.00 41.31 2.40
4819 8531 2.350458 CGGCCCCAACTTGGAATGG 61.350 63.158 9.61 3.44 40.96 3.16
5334 9096 5.796935 GCTAACAAATGTGTTATGCTGACTG 59.203 40.000 8.94 0.00 46.57 3.51
5335 9097 5.772825 AACAAATGTGTTATGCTGACTGT 57.227 34.783 0.00 0.00 46.33 3.55
5648 9715 0.657840 ATTTCGCTTCGTATGCCTGC 59.342 50.000 0.00 0.00 0.00 4.85
5658 9725 1.341209 CGTATGCCTGCAGATAGGACA 59.659 52.381 17.39 3.66 40.42 4.02
5750 9817 2.378634 CCCAATCCGCTTCTCCCCT 61.379 63.158 0.00 0.00 0.00 4.79
5821 9888 2.813908 CGACTTGCCGCCACTACC 60.814 66.667 0.00 0.00 0.00 3.18
5833 9900 1.002544 GCCACTACCTGTGCTCTTTCT 59.997 52.381 0.00 0.00 44.92 2.52
5962 10029 1.375908 CAACTGCCTTCGCTGCCTA 60.376 57.895 0.00 0.00 37.45 3.93
6092 10159 1.138247 GTATGTGCTGCAGCTTGCC 59.862 57.895 36.61 22.16 44.23 4.52
6353 10478 2.507484 TGAGCATCTGGTTCACCAAAG 58.493 47.619 0.00 0.00 46.97 2.77
6437 10564 8.184192 CACAAGTTCACAAAATACAAGTTCTCT 58.816 33.333 0.00 0.00 0.00 3.10
6556 10684 6.856426 CGAGGGAAAACATTAGTTTGAAGTTC 59.144 38.462 0.00 0.00 46.79 3.01
6601 10729 2.735151 TCATAAGAGTTCCTGCTCGGA 58.265 47.619 0.00 0.00 40.26 4.55
6613 10741 0.105593 TGCTCGGATTCTGGCTCATC 59.894 55.000 7.26 0.00 0.00 2.92
6759 13151 2.687935 AGTGTACTTTGCAACCCAAGTG 59.312 45.455 11.01 0.00 34.34 3.16
6762 13154 2.086610 ACTTTGCAACCCAAGTGGAT 57.913 45.000 0.00 0.00 37.39 3.41
6766 13158 4.407296 ACTTTGCAACCCAAGTGGATTTTA 59.593 37.500 0.00 0.00 37.39 1.52
6967 13360 6.788243 TGCATGAACATGTGCTATCTTTTAG 58.212 36.000 14.82 0.00 41.78 1.85
6983 13535 2.736144 TTAGGTTCATGACGCGTCTT 57.264 45.000 36.27 28.72 0.00 3.01
7174 14700 3.005554 ACAGAGTTCATCCATGCTTTCG 58.994 45.455 0.00 0.00 0.00 3.46
7321 14847 3.768406 TGTGTGACATGTTGCAAAGAAC 58.232 40.909 0.00 0.00 0.00 3.01
7331 14857 4.854399 TGTTGCAAAGAACGTGGATTAAG 58.146 39.130 0.00 0.00 0.00 1.85
7364 14890 7.059788 TGCATTTTGCTCCCTCAGTTTATATA 58.940 34.615 0.75 0.00 45.31 0.86
7430 14956 7.061441 GCACTCATGTTGATGTTATTCTTTGTG 59.939 37.037 0.00 0.00 0.00 3.33
7510 15036 2.030562 GTGCTGGGCGTACTGTGT 59.969 61.111 0.00 0.00 0.00 3.72
7536 15062 1.279271 ACTTGACCTGTGACCATAGCC 59.721 52.381 0.00 0.00 0.00 3.93
7629 15155 2.552599 TTTGGGTGTGTCGAATAGCA 57.447 45.000 0.00 0.00 0.00 3.49
7730 15256 1.927174 GTGGGATGAACTTGATCGACG 59.073 52.381 0.00 0.00 0.00 5.12
7757 15283 0.106708 TGGCAGCTTGAACTTCGTCT 59.893 50.000 0.00 0.00 0.00 4.18
7803 15332 1.623542 GGCGGTGGGATACTCTTGGT 61.624 60.000 0.00 0.00 0.00 3.67
7927 15456 2.543777 TCTTTCTTGGCAACGCTACT 57.456 45.000 0.00 0.00 42.51 2.57
7939 15468 1.890876 ACGCTACTGTGCCAATTCAA 58.109 45.000 0.00 0.00 0.00 2.69
8087 15639 9.366216 AGTGTTAAAATCACCTTTTGAACTTTC 57.634 29.630 0.00 0.00 37.92 2.62
8180 15732 0.403271 AAGCCAGCCAACTCATGACT 59.597 50.000 0.00 0.00 0.00 3.41
8190 15742 4.320494 GCCAACTCATGACTTAAACAGTGG 60.320 45.833 0.00 0.00 35.01 4.00
8223 15775 5.222027 TGTGTTTTGAGAGGGACCAATCATA 60.222 40.000 0.00 0.00 0.00 2.15
8267 15851 9.337396 TGTGTACAATATGATAACCCAATTCTC 57.663 33.333 0.00 0.00 0.00 2.87
8288 15872 3.066621 TCTCAACATGCAAAGTGTTCACC 59.933 43.478 1.17 0.00 37.69 4.02
8336 15920 7.547370 GCATTTATGTCTTCTCTCACACTAAGT 59.453 37.037 0.00 0.00 0.00 2.24
8337 15921 9.081997 CATTTATGTCTTCTCTCACACTAAGTC 57.918 37.037 0.00 0.00 0.00 3.01
8338 15922 7.761038 TTATGTCTTCTCTCACACTAAGTCA 57.239 36.000 0.00 0.00 0.00 3.41
8339 15923 6.849085 ATGTCTTCTCTCACACTAAGTCAT 57.151 37.500 0.00 0.00 0.00 3.06
8340 15924 6.018589 TGTCTTCTCTCACACTAAGTCATG 57.981 41.667 0.00 0.00 0.00 3.07
8341 15925 4.862018 GTCTTCTCTCACACTAAGTCATGC 59.138 45.833 0.00 0.00 0.00 4.06
8342 15926 4.524328 TCTTCTCTCACACTAAGTCATGCA 59.476 41.667 0.00 0.00 0.00 3.96
8343 15927 5.186603 TCTTCTCTCACACTAAGTCATGCAT 59.813 40.000 0.00 0.00 0.00 3.96
8344 15928 5.411831 TCTCTCACACTAAGTCATGCATT 57.588 39.130 0.00 0.00 0.00 3.56
8345 15929 5.798132 TCTCTCACACTAAGTCATGCATTT 58.202 37.500 0.00 0.00 0.00 2.32
8346 15930 6.935167 TCTCTCACACTAAGTCATGCATTTA 58.065 36.000 0.00 0.00 0.00 1.40
8347 15931 7.559486 TCTCTCACACTAAGTCATGCATTTAT 58.441 34.615 0.00 0.00 0.00 1.40
8348 15932 7.493645 TCTCTCACACTAAGTCATGCATTTATG 59.506 37.037 0.00 0.00 0.00 1.90
8349 15933 7.105588 TCTCACACTAAGTCATGCATTTATGT 58.894 34.615 0.00 0.00 0.00 2.29
8350 15934 7.278646 TCTCACACTAAGTCATGCATTTATGTC 59.721 37.037 0.00 0.00 0.00 3.06
8351 15935 7.105588 TCACACTAAGTCATGCATTTATGTCT 58.894 34.615 0.00 0.00 0.00 3.41
8352 15936 7.607607 TCACACTAAGTCATGCATTTATGTCTT 59.392 33.333 0.00 0.00 38.97 3.01
8353 15937 7.907045 CACACTAAGTCATGCATTTATGTCTTC 59.093 37.037 0.00 0.00 37.52 2.87
8354 15938 7.826252 ACACTAAGTCATGCATTTATGTCTTCT 59.174 33.333 0.00 0.00 37.52 2.85
8355 15939 8.333908 CACTAAGTCATGCATTTATGTCTTCTC 58.666 37.037 0.00 0.00 37.52 2.87
8356 15940 8.263640 ACTAAGTCATGCATTTATGTCTTCTCT 58.736 33.333 0.00 0.00 37.52 3.10
8357 15941 7.551035 AAGTCATGCATTTATGTCTTCTCTC 57.449 36.000 0.00 0.00 33.28 3.20
8358 15942 6.647229 AGTCATGCATTTATGTCTTCTCTCA 58.353 36.000 0.00 0.00 0.00 3.27
8359 15943 7.281098 AGTCATGCATTTATGTCTTCTCTCAT 58.719 34.615 0.00 0.00 0.00 2.90
8360 15944 8.427276 AGTCATGCATTTATGTCTTCTCTCATA 58.573 33.333 0.00 0.00 0.00 2.15
8361 15945 8.494347 GTCATGCATTTATGTCTTCTCTCATAC 58.506 37.037 0.00 0.00 0.00 2.39
8362 15946 8.427276 TCATGCATTTATGTCTTCTCTCATACT 58.573 33.333 0.00 0.00 0.00 2.12
8363 15947 9.702494 CATGCATTTATGTCTTCTCTCATACTA 57.298 33.333 0.00 0.00 0.00 1.82
8365 15949 9.755804 TGCATTTATGTCTTCTCTCATACTAAG 57.244 33.333 0.00 0.00 0.00 2.18
8366 15950 9.757227 GCATTTATGTCTTCTCTCATACTAAGT 57.243 33.333 0.00 0.00 0.00 2.24
8382 15966 9.890629 TCATACTAAGTCATGCATTTTAAGTCT 57.109 29.630 0.00 0.00 0.00 3.24
8398 15982 1.167851 GTCTGCCACATAAGCAAGCA 58.832 50.000 0.00 0.00 40.35 3.91
8402 15986 1.205179 TGCCACATAAGCAAGCAATGG 59.795 47.619 10.73 4.70 37.28 3.16
8431 16015 9.605951 TTAACCTATAAATTATACTCCCTCCGT 57.394 33.333 0.00 0.00 0.00 4.69
8432 16016 8.502047 AACCTATAAATTATACTCCCTCCGTT 57.498 34.615 0.00 0.00 0.00 4.44
8433 16017 8.131847 ACCTATAAATTATACTCCCTCCGTTC 57.868 38.462 0.00 0.00 0.00 3.95
8434 16018 7.179872 ACCTATAAATTATACTCCCTCCGTTCC 59.820 40.741 0.00 0.00 0.00 3.62
8435 16019 7.399478 CCTATAAATTATACTCCCTCCGTTCCT 59.601 40.741 0.00 0.00 0.00 3.36
8436 16020 5.970501 AAATTATACTCCCTCCGTTCCTT 57.029 39.130 0.00 0.00 0.00 3.36
8437 16021 4.957684 ATTATACTCCCTCCGTTCCTTG 57.042 45.455 0.00 0.00 0.00 3.61
8438 16022 2.544844 ATACTCCCTCCGTTCCTTGA 57.455 50.000 0.00 0.00 0.00 3.02
8439 16023 2.544844 TACTCCCTCCGTTCCTTGAT 57.455 50.000 0.00 0.00 0.00 2.57
8440 16024 2.544844 ACTCCCTCCGTTCCTTGATA 57.455 50.000 0.00 0.00 0.00 2.15
8441 16025 3.047695 ACTCCCTCCGTTCCTTGATAT 57.952 47.619 0.00 0.00 0.00 1.63
8442 16026 4.194678 ACTCCCTCCGTTCCTTGATATA 57.805 45.455 0.00 0.00 0.00 0.86
8443 16027 4.553678 ACTCCCTCCGTTCCTTGATATAA 58.446 43.478 0.00 0.00 0.00 0.98
8444 16028 4.589374 ACTCCCTCCGTTCCTTGATATAAG 59.411 45.833 0.00 0.00 0.00 1.73
8445 16029 3.901844 TCCCTCCGTTCCTTGATATAAGG 59.098 47.826 0.00 0.00 38.78 2.69
8446 16030 3.646637 CCCTCCGTTCCTTGATATAAGGT 59.353 47.826 5.67 0.00 38.55 3.50
8447 16031 4.503296 CCCTCCGTTCCTTGATATAAGGTG 60.503 50.000 5.67 0.00 38.55 4.00
8448 16032 4.101119 CCTCCGTTCCTTGATATAAGGTGT 59.899 45.833 5.67 0.00 38.55 4.16
8449 16033 5.303589 CCTCCGTTCCTTGATATAAGGTGTA 59.696 44.000 5.67 0.00 38.55 2.90
8450 16034 6.014499 CCTCCGTTCCTTGATATAAGGTGTAT 60.014 42.308 5.67 0.00 38.55 2.29
8451 16035 7.177921 CCTCCGTTCCTTGATATAAGGTGTATA 59.822 40.741 5.67 0.00 38.55 1.47
8452 16036 8.118976 TCCGTTCCTTGATATAAGGTGTATAG 57.881 38.462 5.67 0.00 38.55 1.31
8487 16071 2.039418 TCTATGCATGTAACGCTCCCT 58.961 47.619 10.16 0.00 0.00 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.063880 GTGACTGTTGTAGATGGAAAAGGT 58.936 41.667 0.00 0.00 0.00 3.50
1 2 5.063204 TGTGACTGTTGTAGATGGAAAAGG 58.937 41.667 0.00 0.00 0.00 3.11
2 3 6.205464 ACATGTGACTGTTGTAGATGGAAAAG 59.795 38.462 0.00 0.00 0.00 2.27
60 65 9.693739 AACTTTGTATTGGTATGGATTGATGTA 57.306 29.630 0.00 0.00 0.00 2.29
166 171 9.630098 GTGATTGATGTCATACACTGAATTTTT 57.370 29.630 10.57 0.00 35.07 1.94
170 175 7.555195 ACATGTGATTGATGTCATACACTGAAT 59.445 33.333 0.00 0.00 35.07 2.57
177 182 6.252015 GTGCAAACATGTGATTGATGTCATAC 59.748 38.462 13.30 0.00 32.74 2.39
178 183 6.324042 GTGCAAACATGTGATTGATGTCATA 58.676 36.000 13.30 0.00 32.74 2.15
182 187 3.321396 TGGTGCAAACATGTGATTGATGT 59.679 39.130 13.30 0.00 35.49 3.06
202 207 4.218417 GGGAATATTGGATGGTTTCGATGG 59.782 45.833 0.00 0.00 0.00 3.51
215 247 2.481795 CGGCAAAGCAAGGGAATATTGG 60.482 50.000 0.00 0.00 0.00 3.16
219 251 1.319614 GCCGGCAAAGCAAGGGAATA 61.320 55.000 24.80 0.00 0.00 1.75
239 271 3.148279 CGACCCTCCTTCCCTCCG 61.148 72.222 0.00 0.00 0.00 4.63
241 273 3.471806 GCCGACCCTCCTTCCCTC 61.472 72.222 0.00 0.00 0.00 4.30
244 276 3.787001 CCAGCCGACCCTCCTTCC 61.787 72.222 0.00 0.00 0.00 3.46
245 277 3.003763 ACCAGCCGACCCTCCTTC 61.004 66.667 0.00 0.00 0.00 3.46
246 278 3.003763 GACCAGCCGACCCTCCTT 61.004 66.667 0.00 0.00 0.00 3.36
247 279 4.316823 TGACCAGCCGACCCTCCT 62.317 66.667 0.00 0.00 0.00 3.69
249 387 3.775654 CCTGACCAGCCGACCCTC 61.776 72.222 0.00 0.00 0.00 4.30
300 487 4.779733 TCCTCCACTCCTCCCGGC 62.780 72.222 0.00 0.00 0.00 6.13
303 490 0.689412 CCTTCTCCTCCACTCCTCCC 60.689 65.000 0.00 0.00 0.00 4.30
343 544 2.279810 TTGTCAGATCCACCGGCGA 61.280 57.895 9.30 0.00 0.00 5.54
349 550 0.736325 CCCGACGTTGTCAGATCCAC 60.736 60.000 1.30 0.00 32.09 4.02
350 551 1.589630 CCCGACGTTGTCAGATCCA 59.410 57.895 1.30 0.00 32.09 3.41
387 588 2.359975 AGCTAGGGTTTGGCGCAC 60.360 61.111 10.83 0.00 0.00 5.34
388 589 2.046314 GAGCTAGGGTTTGGCGCA 60.046 61.111 10.83 0.00 0.00 6.09
389 590 3.195698 CGAGCTAGGGTTTGGCGC 61.196 66.667 0.00 0.00 0.00 6.53
390 591 2.511600 CCGAGCTAGGGTTTGGCG 60.512 66.667 4.68 0.00 0.00 5.69
407 608 2.185310 AACCATCGTCTCAGCCACCC 62.185 60.000 0.00 0.00 0.00 4.61
408 609 1.021390 CAACCATCGTCTCAGCCACC 61.021 60.000 0.00 0.00 0.00 4.61
409 610 0.320771 ACAACCATCGTCTCAGCCAC 60.321 55.000 0.00 0.00 0.00 5.01
416 617 1.374947 CCCCACACAACCATCGTCT 59.625 57.895 0.00 0.00 0.00 4.18
417 618 1.072505 ACCCCACACAACCATCGTC 59.927 57.895 0.00 0.00 0.00 4.20
418 619 1.228124 CACCCCACACAACCATCGT 60.228 57.895 0.00 0.00 0.00 3.73
419 620 1.971167 CCACCCCACACAACCATCG 60.971 63.158 0.00 0.00 0.00 3.84
420 621 0.893727 GTCCACCCCACACAACCATC 60.894 60.000 0.00 0.00 0.00 3.51
421 622 1.152830 GTCCACCCCACACAACCAT 59.847 57.895 0.00 0.00 0.00 3.55
422 623 2.598467 GTCCACCCCACACAACCA 59.402 61.111 0.00 0.00 0.00 3.67
423 624 2.593436 CGTCCACCCCACACAACC 60.593 66.667 0.00 0.00 0.00 3.77
425 626 1.147376 CTTCGTCCACCCCACACAA 59.853 57.895 0.00 0.00 0.00 3.33
465 667 1.374252 GACCGAGCGAGGCAAAGAA 60.374 57.895 0.22 0.00 33.69 2.52
501 703 3.617263 GGCAACTGTATTTACGACCAGAG 59.383 47.826 0.00 0.00 0.00 3.35
507 709 5.120399 CCCTATTGGCAACTGTATTTACGA 58.880 41.667 0.00 0.00 37.61 3.43
508 710 4.274950 CCCCTATTGGCAACTGTATTTACG 59.725 45.833 0.00 0.00 37.61 3.18
545 747 5.009210 CAGTCCCTCAAAATAAAACGGTTCA 59.991 40.000 0.00 0.00 0.00 3.18
546 748 5.458015 CAGTCCCTCAAAATAAAACGGTTC 58.542 41.667 0.00 0.00 0.00 3.62
556 758 4.870021 ATTCTAGCCAGTCCCTCAAAAT 57.130 40.909 0.00 0.00 0.00 1.82
557 759 4.657814 AATTCTAGCCAGTCCCTCAAAA 57.342 40.909 0.00 0.00 0.00 2.44
562 764 4.820775 TCTCATAATTCTAGCCAGTCCCT 58.179 43.478 0.00 0.00 0.00 4.20
567 769 5.698089 TCGCAATTCTCATAATTCTAGCCAG 59.302 40.000 0.00 0.00 0.00 4.85
570 772 7.183580 ACTTCGCAATTCTCATAATTCTAGC 57.816 36.000 0.00 0.00 0.00 3.42
572 774 8.328146 CGAAACTTCGCAATTCTCATAATTCTA 58.672 33.333 0.00 0.00 44.26 2.10
593 795 8.240883 ACAGTGTAGTTTAGAATCATCGAAAC 57.759 34.615 0.00 6.48 45.82 2.78
594 796 9.917129 TTACAGTGTAGTTTAGAATCATCGAAA 57.083 29.630 2.68 0.00 0.00 3.46
601 803 9.262472 CGCAAAATTACAGTGTAGTTTAGAATC 57.738 33.333 20.24 9.62 0.00 2.52
602 804 8.995220 TCGCAAAATTACAGTGTAGTTTAGAAT 58.005 29.630 20.24 5.95 0.00 2.40
603 805 8.367943 TCGCAAAATTACAGTGTAGTTTAGAA 57.632 30.769 20.24 7.49 0.00 2.10
604 806 7.949903 TCGCAAAATTACAGTGTAGTTTAGA 57.050 32.000 20.24 16.82 0.00 2.10
611 813 9.347934 CCAAAATTATCGCAAAATTACAGTGTA 57.652 29.630 0.00 0.00 0.00 2.90
612 814 8.085296 TCCAAAATTATCGCAAAATTACAGTGT 58.915 29.630 0.00 0.00 0.00 3.55
613 815 8.372521 GTCCAAAATTATCGCAAAATTACAGTG 58.627 33.333 0.00 0.00 0.00 3.66
614 816 8.085296 TGTCCAAAATTATCGCAAAATTACAGT 58.915 29.630 0.00 0.00 0.00 3.55
615 817 8.459521 TGTCCAAAATTATCGCAAAATTACAG 57.540 30.769 0.00 0.00 0.00 2.74
616 818 8.818141 TTGTCCAAAATTATCGCAAAATTACA 57.182 26.923 0.00 0.00 0.00 2.41
617 819 8.921670 ACTTGTCCAAAATTATCGCAAAATTAC 58.078 29.630 0.00 0.00 0.00 1.89
618 820 9.134734 GACTTGTCCAAAATTATCGCAAAATTA 57.865 29.630 0.00 0.00 0.00 1.40
619 821 7.655328 TGACTTGTCCAAAATTATCGCAAAATT 59.345 29.630 0.00 0.00 0.00 1.82
620 822 7.151308 TGACTTGTCCAAAATTATCGCAAAAT 58.849 30.769 0.00 0.00 0.00 1.82
621 823 6.507900 TGACTTGTCCAAAATTATCGCAAAA 58.492 32.000 0.00 0.00 0.00 2.44
622 824 6.078202 TGACTTGTCCAAAATTATCGCAAA 57.922 33.333 0.00 0.00 0.00 3.68
623 825 5.697473 TGACTTGTCCAAAATTATCGCAA 57.303 34.783 0.00 0.00 0.00 4.85
624 826 5.414144 TCATGACTTGTCCAAAATTATCGCA 59.586 36.000 0.00 0.00 0.00 5.10
625 827 5.879237 TCATGACTTGTCCAAAATTATCGC 58.121 37.500 0.00 0.00 0.00 4.58
626 828 7.807433 TGTTTCATGACTTGTCCAAAATTATCG 59.193 33.333 0.00 0.00 0.00 2.92
627 829 9.132521 CTGTTTCATGACTTGTCCAAAATTATC 57.867 33.333 0.00 0.00 0.00 1.75
628 830 8.859090 TCTGTTTCATGACTTGTCCAAAATTAT 58.141 29.630 0.00 0.00 0.00 1.28
629 831 8.231692 TCTGTTTCATGACTTGTCCAAAATTA 57.768 30.769 0.00 0.00 0.00 1.40
630 832 7.068593 TCTCTGTTTCATGACTTGTCCAAAATT 59.931 33.333 0.00 0.00 0.00 1.82
631 833 6.547141 TCTCTGTTTCATGACTTGTCCAAAAT 59.453 34.615 0.00 0.00 0.00 1.82
632 834 5.885352 TCTCTGTTTCATGACTTGTCCAAAA 59.115 36.000 0.00 0.00 0.00 2.44
633 835 5.436175 TCTCTGTTTCATGACTTGTCCAAA 58.564 37.500 0.00 0.00 0.00 3.28
634 836 5.034852 TCTCTGTTTCATGACTTGTCCAA 57.965 39.130 0.00 0.00 0.00 3.53
635 837 4.687901 TCTCTGTTTCATGACTTGTCCA 57.312 40.909 0.00 0.00 0.00 4.02
636 838 6.876257 ACTTATCTCTGTTTCATGACTTGTCC 59.124 38.462 0.00 0.00 0.00 4.02
637 839 7.897575 ACTTATCTCTGTTTCATGACTTGTC 57.102 36.000 0.00 0.00 0.00 3.18
638 840 8.153550 AGAACTTATCTCTGTTTCATGACTTGT 58.846 33.333 0.00 0.00 30.46 3.16
639 841 8.545229 AGAACTTATCTCTGTTTCATGACTTG 57.455 34.615 0.00 0.00 30.46 3.16
640 842 9.566432 AAAGAACTTATCTCTGTTTCATGACTT 57.434 29.630 0.00 0.00 37.42 3.01
641 843 9.566432 AAAAGAACTTATCTCTGTTTCATGACT 57.434 29.630 0.00 0.00 37.42 3.41
642 844 9.604626 CAAAAGAACTTATCTCTGTTTCATGAC 57.395 33.333 0.00 0.00 37.42 3.06
643 845 9.342308 ACAAAAGAACTTATCTCTGTTTCATGA 57.658 29.630 0.00 0.00 37.42 3.07
644 846 9.390795 CACAAAAGAACTTATCTCTGTTTCATG 57.609 33.333 0.00 0.00 37.42 3.07
645 847 9.342308 TCACAAAAGAACTTATCTCTGTTTCAT 57.658 29.630 0.00 0.00 37.42 2.57
646 848 8.731275 TCACAAAAGAACTTATCTCTGTTTCA 57.269 30.769 0.00 0.00 37.42 2.69
657 859 9.187455 GGCGAATTAAAATCACAAAAGAACTTA 57.813 29.630 0.00 0.00 0.00 2.24
658 860 7.096230 CGGCGAATTAAAATCACAAAAGAACTT 60.096 33.333 0.00 0.00 0.00 2.66
659 861 6.362283 CGGCGAATTAAAATCACAAAAGAACT 59.638 34.615 0.00 0.00 0.00 3.01
660 862 6.361214 TCGGCGAATTAAAATCACAAAAGAAC 59.639 34.615 7.35 0.00 0.00 3.01
661 863 6.439599 TCGGCGAATTAAAATCACAAAAGAA 58.560 32.000 7.35 0.00 0.00 2.52
662 864 6.003234 TCGGCGAATTAAAATCACAAAAGA 57.997 33.333 7.35 0.00 0.00 2.52
663 865 6.143118 TGTTCGGCGAATTAAAATCACAAAAG 59.857 34.615 26.42 0.00 0.00 2.27
664 866 5.977725 TGTTCGGCGAATTAAAATCACAAAA 59.022 32.000 26.42 0.00 0.00 2.44
665 867 5.520632 TGTTCGGCGAATTAAAATCACAAA 58.479 33.333 26.42 0.00 0.00 2.83
666 868 5.109662 TGTTCGGCGAATTAAAATCACAA 57.890 34.783 26.42 0.00 0.00 3.33
667 869 4.214545 ACTGTTCGGCGAATTAAAATCACA 59.785 37.500 26.42 14.75 0.00 3.58
668 870 4.719040 ACTGTTCGGCGAATTAAAATCAC 58.281 39.130 26.42 10.59 0.00 3.06
669 871 6.483385 TTACTGTTCGGCGAATTAAAATCA 57.517 33.333 26.42 15.30 0.00 2.57
670 872 7.908601 AGAATTACTGTTCGGCGAATTAAAATC 59.091 33.333 26.42 20.62 33.36 2.17
671 873 7.758495 AGAATTACTGTTCGGCGAATTAAAAT 58.242 30.769 26.42 18.63 33.36 1.82
672 874 7.136289 AGAATTACTGTTCGGCGAATTAAAA 57.864 32.000 26.42 17.30 33.36 1.52
673 875 6.730960 AGAATTACTGTTCGGCGAATTAAA 57.269 33.333 26.42 16.96 33.36 1.52
674 876 6.369340 TGAAGAATTACTGTTCGGCGAATTAA 59.631 34.615 26.42 21.09 33.36 1.40
675 877 5.870433 TGAAGAATTACTGTTCGGCGAATTA 59.130 36.000 26.42 16.42 33.36 1.40
676 878 4.693566 TGAAGAATTACTGTTCGGCGAATT 59.306 37.500 26.42 14.49 33.36 2.17
677 879 4.092968 GTGAAGAATTACTGTTCGGCGAAT 59.907 41.667 26.42 12.59 33.36 3.34
678 880 3.430895 GTGAAGAATTACTGTTCGGCGAA 59.569 43.478 19.83 19.83 33.36 4.70
679 881 2.991190 GTGAAGAATTACTGTTCGGCGA 59.009 45.455 4.99 4.99 33.36 5.54
680 882 2.734606 TGTGAAGAATTACTGTTCGGCG 59.265 45.455 0.00 0.00 33.36 6.46
681 883 4.742438 TTGTGAAGAATTACTGTTCGGC 57.258 40.909 0.00 0.00 33.36 5.54
682 884 6.898041 TCAATTGTGAAGAATTACTGTTCGG 58.102 36.000 5.13 0.00 33.36 4.30
683 885 6.521133 GCTCAATTGTGAAGAATTACTGTTCG 59.479 38.462 11.59 0.00 31.88 3.95
684 886 6.803807 GGCTCAATTGTGAAGAATTACTGTTC 59.196 38.462 11.59 0.00 31.88 3.18
685 887 6.294731 GGGCTCAATTGTGAAGAATTACTGTT 60.295 38.462 11.59 0.00 31.88 3.16
686 888 5.183904 GGGCTCAATTGTGAAGAATTACTGT 59.816 40.000 11.59 0.00 31.88 3.55
687 889 5.183713 TGGGCTCAATTGTGAAGAATTACTG 59.816 40.000 11.59 0.00 31.88 2.74
688 890 5.324409 TGGGCTCAATTGTGAAGAATTACT 58.676 37.500 11.59 0.00 31.88 2.24
689 891 5.643379 TGGGCTCAATTGTGAAGAATTAC 57.357 39.130 11.59 0.00 31.88 1.89
690 892 5.774690 AGTTGGGCTCAATTGTGAAGAATTA 59.225 36.000 0.27 0.00 35.10 1.40
691 893 4.590222 AGTTGGGCTCAATTGTGAAGAATT 59.410 37.500 0.27 0.00 35.10 2.17
692 894 4.021719 CAGTTGGGCTCAATTGTGAAGAAT 60.022 41.667 13.40 0.00 36.32 2.40
693 895 3.318839 CAGTTGGGCTCAATTGTGAAGAA 59.681 43.478 13.40 0.00 36.32 2.52
694 896 2.886523 CAGTTGGGCTCAATTGTGAAGA 59.113 45.455 13.40 0.00 36.32 2.87
695 897 2.029649 CCAGTTGGGCTCAATTGTGAAG 60.030 50.000 19.24 1.65 38.45 3.02
696 898 1.962807 CCAGTTGGGCTCAATTGTGAA 59.037 47.619 19.24 0.00 38.45 3.18
697 899 1.619654 CCAGTTGGGCTCAATTGTGA 58.380 50.000 19.24 0.00 38.45 3.58
708 910 1.604378 CAGACTAGGGCCAGTTGGG 59.396 63.158 6.18 0.00 40.85 4.12
709 911 1.078143 GCAGACTAGGGCCAGTTGG 60.078 63.158 6.18 5.15 38.53 3.77
710 912 0.107945 GAGCAGACTAGGGCCAGTTG 60.108 60.000 6.18 9.41 0.00 3.16
711 913 0.545309 TGAGCAGACTAGGGCCAGTT 60.545 55.000 6.18 0.00 0.00 3.16
712 914 0.545309 TTGAGCAGACTAGGGCCAGT 60.545 55.000 6.18 7.38 0.00 4.00
713 915 0.615331 TTTGAGCAGACTAGGGCCAG 59.385 55.000 6.18 3.63 0.00 4.85
714 916 1.003580 CTTTTGAGCAGACTAGGGCCA 59.996 52.381 6.18 0.00 0.00 5.36
715 917 1.279271 TCTTTTGAGCAGACTAGGGCC 59.721 52.381 0.00 0.00 0.00 5.80
716 918 2.744741 GTTCTTTTGAGCAGACTAGGGC 59.255 50.000 0.00 0.00 0.00 5.19
717 919 4.249661 GAGTTCTTTTGAGCAGACTAGGG 58.750 47.826 0.00 0.00 31.68 3.53
718 920 3.923461 CGAGTTCTTTTGAGCAGACTAGG 59.077 47.826 0.00 0.00 31.68 3.02
719 921 4.384247 CACGAGTTCTTTTGAGCAGACTAG 59.616 45.833 0.00 0.00 31.68 2.57
720 922 4.299155 CACGAGTTCTTTTGAGCAGACTA 58.701 43.478 0.00 0.00 31.68 2.59
721 923 3.126831 CACGAGTTCTTTTGAGCAGACT 58.873 45.455 0.00 0.00 31.68 3.24
722 924 2.348966 GCACGAGTTCTTTTGAGCAGAC 60.349 50.000 0.00 0.00 31.68 3.51
723 925 1.867233 GCACGAGTTCTTTTGAGCAGA 59.133 47.619 0.00 0.00 31.68 4.26
724 926 1.599071 TGCACGAGTTCTTTTGAGCAG 59.401 47.619 0.00 0.00 31.68 4.24
725 927 1.662517 TGCACGAGTTCTTTTGAGCA 58.337 45.000 0.00 0.00 31.68 4.26
726 928 2.755836 TTGCACGAGTTCTTTTGAGC 57.244 45.000 0.00 0.00 0.00 4.26
727 929 7.858052 ATTAAATTGCACGAGTTCTTTTGAG 57.142 32.000 0.00 0.00 0.00 3.02
728 930 9.906660 ATTATTAAATTGCACGAGTTCTTTTGA 57.093 25.926 0.00 0.00 0.00 2.69
756 958 4.640647 GCCCATCGGTAAAGATCTTTTCTT 59.359 41.667 25.02 4.29 46.92 2.52
757 959 4.200092 GCCCATCGGTAAAGATCTTTTCT 58.800 43.478 25.02 4.67 35.70 2.52
758 960 3.315470 GGCCCATCGGTAAAGATCTTTTC 59.685 47.826 25.02 19.43 34.23 2.29
759 961 3.053619 AGGCCCATCGGTAAAGATCTTTT 60.054 43.478 25.02 10.16 34.23 2.27
760 962 2.509964 AGGCCCATCGGTAAAGATCTTT 59.490 45.455 23.53 23.53 36.63 2.52
761 963 2.127708 AGGCCCATCGGTAAAGATCTT 58.872 47.619 0.88 0.88 0.00 2.40
762 964 1.807814 AGGCCCATCGGTAAAGATCT 58.192 50.000 0.00 0.00 0.00 2.75
763 965 2.609737 CGTAGGCCCATCGGTAAAGATC 60.610 54.545 0.00 0.00 0.00 2.75
764 966 1.343465 CGTAGGCCCATCGGTAAAGAT 59.657 52.381 0.00 0.00 0.00 2.40
765 967 0.748450 CGTAGGCCCATCGGTAAAGA 59.252 55.000 0.00 0.00 0.00 2.52
766 968 0.249741 CCGTAGGCCCATCGGTAAAG 60.250 60.000 18.68 0.00 46.14 1.85
767 969 1.824658 CCGTAGGCCCATCGGTAAA 59.175 57.895 18.68 0.00 46.14 2.01
768 970 3.541072 CCGTAGGCCCATCGGTAA 58.459 61.111 18.68 0.00 46.14 2.85
781 983 3.549423 CCGCTTCGATTATCTGTTCCGTA 60.549 47.826 0.00 0.00 0.00 4.02
784 986 1.527311 GCCGCTTCGATTATCTGTTCC 59.473 52.381 0.00 0.00 0.00 3.62
787 989 0.102481 ACGCCGCTTCGATTATCTGT 59.898 50.000 1.50 0.00 0.00 3.41
792 994 2.202824 CCCACGCCGCTTCGATTA 60.203 61.111 1.50 0.00 0.00 1.75
853 1056 1.061546 AGAAGCCGGGTTTCCAGTAA 58.938 50.000 21.73 0.00 0.00 2.24
854 1057 1.061546 AAGAAGCCGGGTTTCCAGTA 58.938 50.000 21.73 0.00 0.00 2.74
855 1058 0.185175 AAAGAAGCCGGGTTTCCAGT 59.815 50.000 21.73 0.00 0.00 4.00
856 1059 0.598065 CAAAGAAGCCGGGTTTCCAG 59.402 55.000 21.73 7.83 0.00 3.86
857 1060 0.183971 TCAAAGAAGCCGGGTTTCCA 59.816 50.000 21.73 0.29 0.00 3.53
869 1072 5.536161 CCCCTTCAATCTCAACTTCAAAGAA 59.464 40.000 0.00 0.00 0.00 2.52
875 1078 1.740025 CGCCCCTTCAATCTCAACTTC 59.260 52.381 0.00 0.00 0.00 3.01
937 1146 3.000819 CGTAGGGGTGGCAGTGGA 61.001 66.667 0.00 0.00 0.00 4.02
940 1149 3.246112 TTGCGTAGGGGTGGCAGT 61.246 61.111 0.00 0.00 38.04 4.40
949 1158 1.134965 CACCCTCTTCTCTTGCGTAGG 60.135 57.143 0.00 0.00 0.00 3.18
981 1190 3.832490 TCATCTTCTTTCTCGAACTGGGA 59.168 43.478 0.00 0.00 0.00 4.37
987 1196 3.428180 CCGAGCTCATCTTCTTTCTCGAA 60.428 47.826 15.40 0.00 44.08 3.71
988 1197 2.098280 CCGAGCTCATCTTCTTTCTCGA 59.902 50.000 15.40 0.00 44.08 4.04
1064 1273 1.208052 CCAGATTCCTCTTCTTCGCCA 59.792 52.381 0.00 0.00 0.00 5.69
1082 1291 4.760220 GCCCTTCCTCCCTCCCCA 62.760 72.222 0.00 0.00 0.00 4.96
1088 1297 1.208165 TTCTTCCTGCCCTTCCTCCC 61.208 60.000 0.00 0.00 0.00 4.30
1097 1306 4.217334 CCTTTTTCTCTTCTTCTTCCTGCC 59.783 45.833 0.00 0.00 0.00 4.85
1098 1307 5.049060 GTCCTTTTTCTCTTCTTCTTCCTGC 60.049 44.000 0.00 0.00 0.00 4.85
1099 1308 6.295249 AGTCCTTTTTCTCTTCTTCTTCCTG 58.705 40.000 0.00 0.00 0.00 3.86
1100 1309 6.508030 AGTCCTTTTTCTCTTCTTCTTCCT 57.492 37.500 0.00 0.00 0.00 3.36
1101 1310 5.407084 CGAGTCCTTTTTCTCTTCTTCTTCC 59.593 44.000 0.00 0.00 0.00 3.46
1102 1311 5.107259 GCGAGTCCTTTTTCTCTTCTTCTTC 60.107 44.000 0.00 0.00 0.00 2.87
1103 1312 4.752604 GCGAGTCCTTTTTCTCTTCTTCTT 59.247 41.667 0.00 0.00 0.00 2.52
1104 1313 4.311606 GCGAGTCCTTTTTCTCTTCTTCT 58.688 43.478 0.00 0.00 0.00 2.85
1105 1314 3.433957 GGCGAGTCCTTTTTCTCTTCTTC 59.566 47.826 0.00 0.00 0.00 2.87
1106 1315 3.071747 AGGCGAGTCCTTTTTCTCTTCTT 59.928 43.478 0.00 0.00 44.75 2.52
1107 1316 2.635427 AGGCGAGTCCTTTTTCTCTTCT 59.365 45.455 0.00 0.00 44.75 2.85
1108 1317 2.739379 CAGGCGAGTCCTTTTTCTCTTC 59.261 50.000 0.00 0.00 44.75 2.87
1131 1340 1.500474 CTCTGGGCATGGGAAGTAGA 58.500 55.000 0.00 0.00 0.00 2.59
1155 1370 1.493950 GATCGATGAAGCAGCCACGG 61.494 60.000 0.54 0.00 0.00 4.94
1188 1403 3.781079 TTATCCTTTGCAATCTTGGCG 57.219 42.857 0.00 0.00 0.00 5.69
1206 1421 5.105146 ACCTAATTTTGCGGCATCCATTTTA 60.105 36.000 2.28 0.00 0.00 1.52
1210 1425 2.362077 GACCTAATTTTGCGGCATCCAT 59.638 45.455 2.28 0.00 0.00 3.41
1226 1441 3.375699 GGAGAGGAACCAATCAGACCTA 58.624 50.000 0.00 0.00 0.00 3.08
1232 1447 1.846439 GATGGGGAGAGGAACCAATCA 59.154 52.381 0.00 0.00 37.89 2.57
1256 1471 9.304731 ACAATTGGTGATTAATTGATTGATTCG 57.695 29.630 10.83 0.00 44.37 3.34
1274 1489 2.162208 GCATCGATCACACACAATTGGT 59.838 45.455 10.83 2.02 0.00 3.67
1276 1491 3.165890 GTGCATCGATCACACACAATTG 58.834 45.455 18.70 3.24 34.43 2.32
1321 1544 0.551396 GGAATCTTCACCGGGGGAAT 59.449 55.000 13.05 0.00 0.00 3.01
1322 1545 0.549169 AGGAATCTTCACCGGGGGAA 60.549 55.000 11.97 11.97 0.00 3.97
1366 1590 1.896660 CCCGTGTGTGAAACCTGGG 60.897 63.158 0.00 0.00 34.36 4.45
1491 1715 3.133003 GGTCAGCCAGCTAGTCAATCTTA 59.867 47.826 0.00 0.00 34.09 2.10
1498 1725 2.012673 CATTTGGTCAGCCAGCTAGTC 58.987 52.381 0.00 0.00 46.91 2.59
1539 1766 9.517868 AATCAGAGGTAGTACTAATATAACGCT 57.482 33.333 3.61 0.00 0.00 5.07
1540 1767 9.557338 CAATCAGAGGTAGTACTAATATAACGC 57.443 37.037 3.61 0.00 0.00 4.84
1573 1802 7.387673 ACATCACACGATTTCTTTGAAGATACA 59.612 33.333 0.00 0.00 34.49 2.29
1600 1829 5.779771 ACATGTTCCCCAACAGTATCAAAAT 59.220 36.000 0.00 0.00 45.85 1.82
1601 1830 5.144100 ACATGTTCCCCAACAGTATCAAAA 58.856 37.500 0.00 0.00 45.85 2.44
1873 2111 0.593128 GTTGCACACAGGGTAAGCAG 59.407 55.000 0.00 0.00 36.47 4.24
1883 2121 1.761449 ATGGACAACAGTTGCACACA 58.239 45.000 13.56 7.61 0.00 3.72
2104 2343 6.825721 GGTCATGGAAGACAAATAGAGAACAT 59.174 38.462 0.00 0.00 40.29 2.71
2165 2404 7.789202 ACTAGACTCATGATATGGCACTAAT 57.211 36.000 0.00 0.00 0.00 1.73
2376 2622 6.688637 TCGGAATCAACTTATAGAAGACGA 57.311 37.500 3.65 0.08 36.45 4.20
2452 2698 8.274322 TGGAATAAGAGGCATAAGAAAATCAGA 58.726 33.333 0.00 0.00 0.00 3.27
2588 2835 2.562298 GGTTGAATGGATGAACAAGCCA 59.438 45.455 0.00 0.00 35.59 4.75
2645 2892 6.013725 AGAGGTAGTCACATAAATTCCACACA 60.014 38.462 0.00 0.00 0.00 3.72
2814 3061 7.039722 ACTCCCTCCATTTTTATTTACTCCA 57.960 36.000 0.00 0.00 0.00 3.86
2944 3307 8.177119 AGATGAACTTGCACAGGTAAATAAAA 57.823 30.769 0.00 0.00 0.00 1.52
3233 3596 6.666113 TGGTTAACTAGACATACACATCAGGA 59.334 38.462 5.42 0.00 0.00 3.86
3234 3597 6.873997 TGGTTAACTAGACATACACATCAGG 58.126 40.000 5.42 0.00 0.00 3.86
3477 3840 2.957006 GGAAGTATACTCTTCTCCGCCA 59.043 50.000 5.70 0.00 42.19 5.69
3699 4063 6.992063 ACATTCTGAGTAATGCCTACAAAG 57.008 37.500 0.00 0.00 39.93 2.77
3742 4107 8.514330 AGTAAATGAACAGTGACCTAAAAACA 57.486 30.769 0.00 0.00 0.00 2.83
3913 4278 7.130303 TCCGTAGATCTAACATATTGTCTCG 57.870 40.000 3.40 0.00 0.00 4.04
4286 4651 8.172484 CAGCTATTTACGCAAACATAGTTTACA 58.828 33.333 0.00 0.00 0.00 2.41
4301 6856 7.192913 TGAATTAACCATTGCAGCTATTTACG 58.807 34.615 0.00 0.00 0.00 3.18
4384 6939 1.065854 AGTCTCAACATGCCCAGCTAC 60.066 52.381 0.00 0.00 0.00 3.58
4406 6961 5.239087 GTGGTTGGCATCATGAATTGTTTTT 59.761 36.000 0.00 0.00 0.00 1.94
4614 8318 8.511604 AGTTCAAAGGGAATGATACATTAGTG 57.488 34.615 0.00 0.00 37.93 2.74
4646 8354 9.452287 AAACAATAGAAAGCAATATGCCAATTT 57.548 25.926 0.00 0.00 46.52 1.82
4706 8414 4.492494 TCTAAATGAGCCATCTTCAGCA 57.508 40.909 0.00 0.00 0.00 4.41
4819 8531 1.153958 GCTTGATGGCCTCAAACGC 60.154 57.895 15.54 13.10 43.20 4.84
5334 9096 4.023726 TGTGAAACACCCCAACCTATAC 57.976 45.455 0.00 0.00 45.67 1.47
5402 9164 5.582269 TCTTGCAATAACTTCTCCAAGATCG 59.418 40.000 0.00 0.00 35.22 3.69
5648 9715 6.358178 TCTCTACAGGTAAGTGTCCTATCTG 58.642 44.000 0.00 0.00 33.54 2.90
5658 9725 6.599638 GGCAAATTTGATCTCTACAGGTAAGT 59.400 38.462 22.31 0.00 0.00 2.24
5821 9888 4.314121 AGCTAACTGAAGAAAGAGCACAG 58.686 43.478 0.00 0.00 32.28 3.66
5962 10029 1.779569 GTGACGACTCGAACATTGGT 58.220 50.000 5.20 0.00 0.00 3.67
6092 10159 0.440758 CCGCATTGCAGCAAATTGTG 59.559 50.000 12.97 13.17 0.00 3.33
6353 10478 7.181143 ACTTGCATGTTTGAACATTGAAATC 57.819 32.000 6.62 0.00 46.95 2.17
6437 10564 5.574891 ACTTGTCAACTGTATTTTGTGCA 57.425 34.783 0.00 0.00 0.00 4.57
6556 10684 2.455674 TCTGATGTTGGTGAAGACCG 57.544 50.000 0.00 0.00 46.62 4.79
6613 10741 2.923020 GGCCATACAAAGAAAACATGCG 59.077 45.455 0.00 0.00 0.00 4.73
6967 13360 0.992802 GAGAAGACGCGTCATGAACC 59.007 55.000 37.85 19.89 0.00 3.62
6983 13535 9.613428 CTCATTATGGGTAAGTTTAATGTGAGA 57.387 33.333 0.00 0.00 34.91 3.27
7174 14700 4.705023 ACCTAACATGGATGCTTTGGTAAC 59.295 41.667 0.00 0.00 31.35 2.50
7321 14847 3.000041 TGCAAGCAGTACTTAATCCACG 59.000 45.455 0.00 0.00 36.04 4.94
7364 14890 7.782049 TCTATCGAGGTCAATGTTTTGTATCT 58.218 34.615 0.00 0.00 34.32 1.98
7430 14956 4.099266 AGTTCATGAGACAGTAGGATCTGC 59.901 45.833 0.00 0.00 38.84 4.26
7510 15036 2.976185 TGGTCACAGGTCAAGTATCCAA 59.024 45.455 0.00 0.00 0.00 3.53
7571 15097 8.864024 CGGATTGTGCAGTTTACTCATATATAG 58.136 37.037 0.00 0.00 0.00 1.31
7629 15155 2.270352 ACGGATCAATGTGGTGTGTT 57.730 45.000 0.00 0.00 0.00 3.32
7730 15256 0.033781 TTCAAGCTGCCAAATGTGCC 59.966 50.000 0.00 0.00 0.00 5.01
7803 15332 0.984230 AAGAGGAAGAATGCACGGGA 59.016 50.000 0.00 0.00 0.00 5.14
7845 15374 3.976701 AATCTGCGGCGGACCAAGG 62.977 63.158 14.78 0.00 34.57 3.61
7927 15456 1.000060 GCTCTTGCTTGAATTGGCACA 60.000 47.619 0.00 0.00 38.23 4.57
8158 15710 0.809385 CATGAGTTGGCTGGCTTCAG 59.191 55.000 2.00 0.00 41.30 3.02
8180 15732 3.125487 CACACACGTTGTCCACTGTTTAA 59.875 43.478 0.00 0.00 35.67 1.52
8190 15742 3.485216 CCTCTCAAAACACACACGTTGTC 60.485 47.826 0.00 0.00 35.67 3.18
8223 15775 5.396057 ACACACCTCTAGAGTCTATCCAT 57.604 43.478 18.42 0.00 0.00 3.41
8267 15851 3.067180 AGGTGAACACTTTGCATGTTGAG 59.933 43.478 8.84 0.00 40.36 3.02
8288 15872 4.376413 GCATGACTTAGTGTGAACGTTGAG 60.376 45.833 5.00 0.00 0.00 3.02
8336 15920 8.427276 AGTATGAGAGAAGACATAAATGCATGA 58.573 33.333 0.00 0.00 32.07 3.07
8337 15921 8.604640 AGTATGAGAGAAGACATAAATGCATG 57.395 34.615 0.00 0.00 32.07 4.06
8339 15923 9.755804 CTTAGTATGAGAGAAGACATAAATGCA 57.244 33.333 0.00 0.00 32.07 3.96
8340 15924 9.757227 ACTTAGTATGAGAGAAGACATAAATGC 57.243 33.333 0.00 0.00 32.07 3.56
8345 15929 8.572185 GCATGACTTAGTATGAGAGAAGACATA 58.428 37.037 0.00 0.00 34.21 2.29
8346 15930 7.069208 TGCATGACTTAGTATGAGAGAAGACAT 59.931 37.037 0.00 0.00 35.61 3.06
8347 15931 6.378280 TGCATGACTTAGTATGAGAGAAGACA 59.622 38.462 0.00 0.00 0.00 3.41
8348 15932 6.800543 TGCATGACTTAGTATGAGAGAAGAC 58.199 40.000 0.00 0.00 0.00 3.01
8349 15933 7.594351 ATGCATGACTTAGTATGAGAGAAGA 57.406 36.000 0.00 0.00 0.00 2.87
8350 15934 8.659925 AAATGCATGACTTAGTATGAGAGAAG 57.340 34.615 0.00 0.00 0.00 2.85
8354 15938 9.890629 ACTTAAAATGCATGACTTAGTATGAGA 57.109 29.630 0.00 0.00 0.00 3.27
8356 15940 9.890629 AGACTTAAAATGCATGACTTAGTATGA 57.109 29.630 0.00 0.00 0.00 2.15
8357 15941 9.926751 CAGACTTAAAATGCATGACTTAGTATG 57.073 33.333 0.00 4.87 0.00 2.39
8358 15942 8.616076 GCAGACTTAAAATGCATGACTTAGTAT 58.384 33.333 0.00 0.00 39.75 2.12
8359 15943 7.065803 GGCAGACTTAAAATGCATGACTTAGTA 59.934 37.037 0.00 0.00 41.78 1.82
8360 15944 6.127897 GGCAGACTTAAAATGCATGACTTAGT 60.128 38.462 0.00 0.45 41.78 2.24
8361 15945 6.127925 TGGCAGACTTAAAATGCATGACTTAG 60.128 38.462 0.00 0.00 41.78 2.18
8362 15946 5.709631 TGGCAGACTTAAAATGCATGACTTA 59.290 36.000 0.00 0.00 41.78 2.24
8363 15947 4.523943 TGGCAGACTTAAAATGCATGACTT 59.476 37.500 0.00 0.00 41.78 3.01
8364 15948 4.081406 TGGCAGACTTAAAATGCATGACT 58.919 39.130 0.00 0.00 41.78 3.41
8365 15949 4.168760 GTGGCAGACTTAAAATGCATGAC 58.831 43.478 0.00 0.00 41.78 3.06
8366 15950 3.825585 TGTGGCAGACTTAAAATGCATGA 59.174 39.130 0.00 0.00 41.78 3.07
8382 15966 1.205179 CCATTGCTTGCTTATGTGGCA 59.795 47.619 0.00 0.00 37.97 4.92
8420 16004 2.544844 ATCAAGGAACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
8422 16006 4.021016 CCTTATATCAAGGAACGGAGGGAG 60.021 50.000 0.00 0.00 39.81 4.30
8424 16008 3.646637 ACCTTATATCAAGGAACGGAGGG 59.353 47.826 9.96 0.00 39.81 4.30
8425 16009 4.101119 ACACCTTATATCAAGGAACGGAGG 59.899 45.833 9.96 0.00 39.81 4.30
8426 16010 5.277857 ACACCTTATATCAAGGAACGGAG 57.722 43.478 9.96 0.00 39.81 4.63
8427 16011 6.989155 ATACACCTTATATCAAGGAACGGA 57.011 37.500 9.96 0.00 39.81 4.69
8428 16012 8.118976 TCTATACACCTTATATCAAGGAACGG 57.881 38.462 9.96 0.05 39.81 4.44
8480 16064 4.937620 ACATGCATGTATAATAAGGGAGCG 59.062 41.667 30.50 0.00 39.68 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.