Multiple sequence alignment - TraesCS4B01G257400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G257400 chr4B 100.000 2816 0 0 1 2816 522668469 522671284 0.000000e+00 5201.0
1 TraesCS4B01G257400 chr4B 93.489 1628 74 10 863 2460 527644914 527643289 0.000000e+00 2390.0
2 TraesCS4B01G257400 chr4B 87.021 1618 136 33 639 2224 527781507 527779932 0.000000e+00 1757.0
3 TraesCS4B01G257400 chr4B 87.284 1392 136 27 868 2233 86132163 86130787 0.000000e+00 1552.0
4 TraesCS4B01G257400 chr4B 84.589 1460 175 32 802 2233 520298415 520296978 0.000000e+00 1404.0
5 TraesCS4B01G257400 chr4B 95.801 643 24 2 1 642 35154503 35153863 0.000000e+00 1035.0
6 TraesCS4B01G257400 chr4B 95.419 633 22 5 1 632 658635114 658634488 0.000000e+00 1002.0
7 TraesCS4B01G257400 chr4B 89.873 395 25 11 2225 2610 527748230 527747842 7.930000e-136 494.0
8 TraesCS4B01G257400 chr4B 98.171 164 3 0 1 164 658605034 658604871 1.440000e-73 287.0
9 TraesCS4B01G257400 chr4B 86.344 227 10 8 649 863 527646680 527646463 8.880000e-56 228.0
10 TraesCS4B01G257400 chr4B 76.667 330 36 19 2238 2541 522683418 522683732 9.200000e-31 145.0
11 TraesCS4B01G257400 chr4B 100.000 69 0 0 3114 3182 522671582 522671650 9.260000e-26 128.0
12 TraesCS4B01G257400 chr4B 87.500 88 4 3 2539 2626 522678641 522678721 9.400000e-16 95.3
13 TraesCS4B01G257400 chr4D 93.896 1966 88 16 705 2657 426870010 426871956 0.000000e+00 2937.0
14 TraesCS4B01G257400 chr4D 85.003 1467 168 32 790 2233 424169710 424168273 0.000000e+00 1443.0
15 TraesCS4B01G257400 chr4D 84.261 1474 176 32 790 2233 423989974 423988527 0.000000e+00 1386.0
16 TraesCS4B01G257400 chr4D 84.168 1478 170 39 790 2233 424110696 424109249 0.000000e+00 1375.0
17 TraesCS4B01G257400 chr4D 87.117 784 83 11 1464 2233 424196577 424195798 0.000000e+00 872.0
18 TraesCS4B01G257400 chr4D 90.300 567 40 7 640 1198 427208802 427209361 0.000000e+00 728.0
19 TraesCS4B01G257400 chr4D 86.508 504 35 15 2223 2706 427261688 427262178 1.010000e-144 523.0
20 TraesCS4B01G257400 chr4D 78.680 394 44 30 2263 2629 427323869 427324249 3.190000e-55 226.0
21 TraesCS4B01G257400 chr4D 79.261 352 30 21 2269 2597 428547191 428546860 4.160000e-49 206.0
22 TraesCS4B01G257400 chr4D 78.201 289 21 20 2241 2508 428557093 428556826 2.560000e-31 147.0
23 TraesCS4B01G257400 chr4D 93.548 93 6 0 2709 2801 426873654 426873746 4.280000e-29 139.0
24 TraesCS4B01G257400 chr4D 88.298 94 9 2 2703 2795 427262151 427262243 9.330000e-21 111.0
25 TraesCS4B01G257400 chr4D 90.244 82 6 1 2576 2657 427021211 427021290 4.340000e-19 106.0
26 TraesCS4B01G257400 chr4D 90.141 71 5 2 3114 3182 427262371 427262441 1.220000e-14 91.6
27 TraesCS4B01G257400 chr4D 92.857 56 4 0 635 690 426868784 426868839 7.320000e-12 82.4
28 TraesCS4B01G257400 chr4A 88.578 1646 94 26 635 2266 38683100 38681535 0.000000e+00 1912.0
29 TraesCS4B01G257400 chr4A 83.485 551 34 17 2184 2706 38681563 38681042 8.040000e-126 460.0
30 TraesCS4B01G257400 chr4A 80.398 352 35 19 2223 2548 37834934 37835277 1.480000e-58 237.0
31 TraesCS4B01G257400 chr4A 94.624 93 5 0 2709 2801 38681063 38680971 9.200000e-31 145.0
32 TraesCS4B01G257400 chr3D 91.205 921 64 11 829 1743 543683996 543683087 0.000000e+00 1236.0
33 TraesCS4B01G257400 chrUn 95.186 644 25 3 1 643 271041992 271042630 0.000000e+00 1013.0
34 TraesCS4B01G257400 chr7B 90.000 60 2 4 2736 2793 103083844 103083787 1.220000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G257400 chr4B 522668469 522671650 3181 False 2664.500000 5201 100.000000 1 3182 2 chr4B.!!$F3 3181
1 TraesCS4B01G257400 chr4B 527779932 527781507 1575 True 1757.000000 1757 87.021000 639 2224 1 chr4B.!!$R5 1585
2 TraesCS4B01G257400 chr4B 86130787 86132163 1376 True 1552.000000 1552 87.284000 868 2233 1 chr4B.!!$R2 1365
3 TraesCS4B01G257400 chr4B 520296978 520298415 1437 True 1404.000000 1404 84.589000 802 2233 1 chr4B.!!$R3 1431
4 TraesCS4B01G257400 chr4B 527643289 527646680 3391 True 1309.000000 2390 89.916500 649 2460 2 chr4B.!!$R8 1811
5 TraesCS4B01G257400 chr4B 35153863 35154503 640 True 1035.000000 1035 95.801000 1 642 1 chr4B.!!$R1 641
6 TraesCS4B01G257400 chr4B 658634488 658635114 626 True 1002.000000 1002 95.419000 1 632 1 chr4B.!!$R7 631
7 TraesCS4B01G257400 chr4D 424168273 424169710 1437 True 1443.000000 1443 85.003000 790 2233 1 chr4D.!!$R3 1443
8 TraesCS4B01G257400 chr4D 423988527 423989974 1447 True 1386.000000 1386 84.261000 790 2233 1 chr4D.!!$R1 1443
9 TraesCS4B01G257400 chr4D 424109249 424110696 1447 True 1375.000000 1375 84.168000 790 2233 1 chr4D.!!$R2 1443
10 TraesCS4B01G257400 chr4D 426868784 426873746 4962 False 1052.800000 2937 93.433667 635 2801 3 chr4D.!!$F4 2166
11 TraesCS4B01G257400 chr4D 424195798 424196577 779 True 872.000000 872 87.117000 1464 2233 1 chr4D.!!$R4 769
12 TraesCS4B01G257400 chr4D 427208802 427209361 559 False 728.000000 728 90.300000 640 1198 1 chr4D.!!$F2 558
13 TraesCS4B01G257400 chr4D 427261688 427262441 753 False 241.866667 523 88.315667 2223 3182 3 chr4D.!!$F5 959
14 TraesCS4B01G257400 chr4A 38680971 38683100 2129 True 839.000000 1912 88.895667 635 2801 3 chr4A.!!$R1 2166
15 TraesCS4B01G257400 chr3D 543683087 543683996 909 True 1236.000000 1236 91.205000 829 1743 1 chr3D.!!$R1 914
16 TraesCS4B01G257400 chrUn 271041992 271042630 638 False 1013.000000 1013 95.186000 1 643 1 chrUn.!!$F1 642

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
139 140 0.027194 CATCTCCGCGATGTTGCAAG 59.973 55.0 8.23 0.0 43.66 4.01 F
144 145 0.027194 CCGCGATGTTGCAAGAGATG 59.973 55.0 8.23 0.0 34.15 2.90 F
1376 4139 0.027716 CTCGTCATGGAGTACGTCGG 59.972 60.0 0.00 0.0 39.99 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1193 3955 1.488527 GTACTTGATGGCGACGATCC 58.511 55.000 0.00 0.0 0.00 3.36 R
2074 5086 1.502190 GCGCCTTCTTTTTCGGGAG 59.498 57.895 0.00 0.0 0.00 4.30 R
2734 7506 2.094545 ACGCTACTTATTTCCGAACGGT 60.095 45.455 12.93 0.0 36.47 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
124 125 4.923942 CGCGGATGGGCAGCATCT 62.924 66.667 0.00 0.00 37.57 2.90
125 126 2.976903 GCGGATGGGCAGCATCTC 60.977 66.667 0.00 0.00 37.65 2.75
126 127 2.281345 CGGATGGGCAGCATCTCC 60.281 66.667 0.00 0.00 0.00 3.71
127 128 2.281345 GGATGGGCAGCATCTCCG 60.281 66.667 0.00 0.00 0.00 4.63
128 129 2.976903 GATGGGCAGCATCTCCGC 60.977 66.667 0.00 0.00 0.00 5.54
129 130 4.923942 ATGGGCAGCATCTCCGCG 62.924 66.667 0.00 0.00 36.85 6.46
131 132 4.615815 GGGCAGCATCTCCGCGAT 62.616 66.667 8.23 0.00 36.85 4.58
137 138 3.798380 CATCTCCGCGATGTTGCA 58.202 55.556 8.23 0.00 43.66 4.08
138 139 2.089017 CATCTCCGCGATGTTGCAA 58.911 52.632 8.23 0.00 43.66 4.08
139 140 0.027194 CATCTCCGCGATGTTGCAAG 59.973 55.000 8.23 0.00 43.66 4.01
140 141 0.108186 ATCTCCGCGATGTTGCAAGA 60.108 50.000 8.23 0.00 32.79 3.02
141 142 0.737367 TCTCCGCGATGTTGCAAGAG 60.737 55.000 8.23 1.71 36.65 2.85
142 143 0.737367 CTCCGCGATGTTGCAAGAGA 60.737 55.000 8.23 0.00 37.17 3.10
143 144 0.108186 TCCGCGATGTTGCAAGAGAT 60.108 50.000 8.23 0.00 34.15 2.75
144 145 0.027194 CCGCGATGTTGCAAGAGATG 59.973 55.000 8.23 0.00 34.15 2.90
167 168 4.020617 CTCCTGCAGCCACCCGAA 62.021 66.667 8.66 0.00 0.00 4.30
168 169 3.329889 TCCTGCAGCCACCCGAAT 61.330 61.111 8.66 0.00 0.00 3.34
169 170 1.971505 CTCCTGCAGCCACCCGAATA 61.972 60.000 8.66 0.00 0.00 1.75
170 171 1.524621 CCTGCAGCCACCCGAATAG 60.525 63.158 8.66 0.00 0.00 1.73
171 172 2.124736 TGCAGCCACCCGAATAGC 60.125 61.111 0.00 0.00 0.00 2.97
172 173 2.124736 GCAGCCACCCGAATAGCA 60.125 61.111 0.00 0.00 0.00 3.49
173 174 2.472909 GCAGCCACCCGAATAGCAC 61.473 63.158 0.00 0.00 0.00 4.40
174 175 1.078497 CAGCCACCCGAATAGCACA 60.078 57.895 0.00 0.00 0.00 4.57
175 176 1.078426 AGCCACCCGAATAGCACAC 60.078 57.895 0.00 0.00 0.00 3.82
176 177 2.112815 GCCACCCGAATAGCACACC 61.113 63.158 0.00 0.00 0.00 4.16
177 178 1.813753 CCACCCGAATAGCACACCG 60.814 63.158 0.00 0.00 0.00 4.94
178 179 2.125269 ACCCGAATAGCACACCGC 60.125 61.111 0.00 0.00 42.91 5.68
219 220 2.435059 GGCACCTTGCGAGGAGTC 60.435 66.667 27.65 17.13 46.74 3.36
220 221 2.811317 GCACCTTGCGAGGAGTCG 60.811 66.667 27.65 12.32 46.74 4.18
229 230 3.418714 GAGGAGTCGACGGCGTAT 58.581 61.111 14.74 0.00 38.98 3.06
230 231 1.279238 GAGGAGTCGACGGCGTATC 59.721 63.158 14.74 10.19 38.98 2.24
231 232 1.153208 AGGAGTCGACGGCGTATCT 60.153 57.895 14.74 11.78 38.98 1.98
232 233 1.009900 GGAGTCGACGGCGTATCTG 60.010 63.158 14.74 3.32 38.98 2.90
233 234 1.434622 GGAGTCGACGGCGTATCTGA 61.435 60.000 14.74 6.05 38.98 3.27
234 235 0.042013 GAGTCGACGGCGTATCTGAG 60.042 60.000 14.74 0.36 38.98 3.35
235 236 1.009900 GTCGACGGCGTATCTGAGG 60.010 63.158 14.74 0.00 38.98 3.86
236 237 1.153309 TCGACGGCGTATCTGAGGA 60.153 57.895 14.74 0.00 38.98 3.71
237 238 1.009900 CGACGGCGTATCTGAGGAC 60.010 63.158 14.74 0.00 0.00 3.85
238 239 1.712018 CGACGGCGTATCTGAGGACA 61.712 60.000 14.74 0.00 0.00 4.02
239 240 0.669077 GACGGCGTATCTGAGGACAT 59.331 55.000 14.74 0.00 0.00 3.06
240 241 0.385751 ACGGCGTATCTGAGGACATG 59.614 55.000 12.58 0.00 0.00 3.21
241 242 0.319040 CGGCGTATCTGAGGACATGG 60.319 60.000 0.00 0.00 0.00 3.66
242 243 0.601311 GGCGTATCTGAGGACATGGC 60.601 60.000 0.00 0.00 0.00 4.40
243 244 0.601311 GCGTATCTGAGGACATGGCC 60.601 60.000 10.65 10.65 0.00 5.36
244 245 0.319040 CGTATCTGAGGACATGGCCG 60.319 60.000 13.29 0.00 0.00 6.13
245 246 0.753262 GTATCTGAGGACATGGCCGT 59.247 55.000 13.29 0.00 0.00 5.68
246 247 1.040646 TATCTGAGGACATGGCCGTC 58.959 55.000 13.29 10.96 35.03 4.79
247 248 0.977627 ATCTGAGGACATGGCCGTCA 60.978 55.000 13.29 15.08 37.66 4.35
248 249 1.153489 CTGAGGACATGGCCGTCAG 60.153 63.158 24.05 24.05 37.66 3.51
249 250 2.512515 GAGGACATGGCCGTCAGC 60.513 66.667 13.29 0.00 37.66 4.26
261 262 3.470567 GTCAGCCGCGACGACAAG 61.471 66.667 8.23 0.00 0.00 3.16
262 263 3.666253 TCAGCCGCGACGACAAGA 61.666 61.111 8.23 0.00 0.00 3.02
263 264 3.470567 CAGCCGCGACGACAAGAC 61.471 66.667 8.23 0.00 0.00 3.01
264 265 3.973516 AGCCGCGACGACAAGACA 61.974 61.111 8.23 0.00 0.00 3.41
265 266 3.470567 GCCGCGACGACAAGACAG 61.471 66.667 8.23 0.00 0.00 3.51
266 267 3.470567 CCGCGACGACAAGACAGC 61.471 66.667 8.23 0.00 0.00 4.40
267 268 3.816920 CGCGACGACAAGACAGCG 61.817 66.667 0.00 0.00 41.56 5.18
268 269 3.470567 GCGACGACAAGACAGCGG 61.471 66.667 0.00 0.00 0.00 5.52
269 270 2.050351 CGACGACAAGACAGCGGT 60.050 61.111 0.00 0.00 0.00 5.68
270 271 2.365068 CGACGACAAGACAGCGGTG 61.365 63.158 14.13 14.13 0.00 4.94
271 272 1.299926 GACGACAAGACAGCGGTGT 60.300 57.895 22.06 22.06 40.71 4.16
272 273 1.548973 GACGACAAGACAGCGGTGTG 61.549 60.000 27.15 13.63 36.88 3.82
273 274 2.939022 GACAAGACAGCGGTGTGC 59.061 61.111 27.15 16.13 46.98 4.57
282 283 2.819595 GCGGTGTGCATCGTGGAT 60.820 61.111 6.71 0.00 45.45 3.41
283 284 2.813179 GCGGTGTGCATCGTGGATC 61.813 63.158 6.71 0.00 45.45 3.36
284 285 1.153568 CGGTGTGCATCGTGGATCT 60.154 57.895 0.00 0.00 0.00 2.75
285 286 1.423721 CGGTGTGCATCGTGGATCTG 61.424 60.000 0.00 0.00 0.00 2.90
286 287 1.091771 GGTGTGCATCGTGGATCTGG 61.092 60.000 0.00 0.00 0.00 3.86
287 288 1.450134 TGTGCATCGTGGATCTGGC 60.450 57.895 0.00 0.00 0.00 4.85
288 289 2.182842 GTGCATCGTGGATCTGGCC 61.183 63.158 0.00 0.00 0.00 5.36
289 290 2.969238 GCATCGTGGATCTGGCCG 60.969 66.667 0.00 0.00 0.00 6.13
290 291 2.501128 CATCGTGGATCTGGCCGT 59.499 61.111 0.00 0.00 0.00 5.68
291 292 1.592669 CATCGTGGATCTGGCCGTC 60.593 63.158 0.00 0.00 0.00 4.79
292 293 3.138930 ATCGTGGATCTGGCCGTCG 62.139 63.158 0.00 0.00 0.00 5.12
293 294 4.873129 CGTGGATCTGGCCGTCGG 62.873 72.222 6.99 6.99 0.00 4.79
304 305 4.803426 CCGTCGGCTCACCTGCTC 62.803 72.222 0.00 0.00 0.00 4.26
305 306 4.056125 CGTCGGCTCACCTGCTCA 62.056 66.667 0.00 0.00 0.00 4.26
306 307 2.343758 GTCGGCTCACCTGCTCAA 59.656 61.111 0.00 0.00 0.00 3.02
307 308 1.078848 GTCGGCTCACCTGCTCAAT 60.079 57.895 0.00 0.00 0.00 2.57
308 309 1.086634 GTCGGCTCACCTGCTCAATC 61.087 60.000 0.00 0.00 0.00 2.67
309 310 1.220206 CGGCTCACCTGCTCAATCT 59.780 57.895 0.00 0.00 0.00 2.40
310 311 0.392193 CGGCTCACCTGCTCAATCTT 60.392 55.000 0.00 0.00 0.00 2.40
311 312 1.093159 GGCTCACCTGCTCAATCTTG 58.907 55.000 0.00 0.00 0.00 3.02
312 313 1.339438 GGCTCACCTGCTCAATCTTGA 60.339 52.381 0.00 0.00 35.57 3.02
313 314 2.430465 GCTCACCTGCTCAATCTTGAA 58.570 47.619 0.00 0.00 36.64 2.69
314 315 2.419324 GCTCACCTGCTCAATCTTGAAG 59.581 50.000 0.00 0.00 36.64 3.02
315 316 2.419324 CTCACCTGCTCAATCTTGAAGC 59.581 50.000 0.00 1.76 36.64 3.86
316 317 1.471684 CACCTGCTCAATCTTGAAGCC 59.528 52.381 10.02 0.00 36.64 4.35
317 318 1.101331 CCTGCTCAATCTTGAAGCCC 58.899 55.000 10.02 0.00 36.64 5.19
318 319 1.101331 CTGCTCAATCTTGAAGCCCC 58.899 55.000 10.02 0.00 36.64 5.80
319 320 0.405198 TGCTCAATCTTGAAGCCCCA 59.595 50.000 10.02 0.00 36.64 4.96
320 321 0.813821 GCTCAATCTTGAAGCCCCAC 59.186 55.000 0.00 0.00 36.64 4.61
321 322 1.089920 CTCAATCTTGAAGCCCCACG 58.910 55.000 0.00 0.00 36.64 4.94
322 323 0.322456 TCAATCTTGAAGCCCCACGG 60.322 55.000 0.00 0.00 33.55 4.94
323 324 3.675126 TCAATCTTGAAGCCCCACGGG 62.675 57.143 0.00 0.00 39.11 5.28
334 335 3.003173 CCACGGGCAAGGGAGAGA 61.003 66.667 0.00 0.00 0.00 3.10
335 336 2.581354 CACGGGCAAGGGAGAGAG 59.419 66.667 0.00 0.00 0.00 3.20
336 337 2.685380 ACGGGCAAGGGAGAGAGG 60.685 66.667 0.00 0.00 0.00 3.69
337 338 4.168291 CGGGCAAGGGAGAGAGGC 62.168 72.222 0.00 0.00 0.00 4.70
338 339 2.690510 GGGCAAGGGAGAGAGGCT 60.691 66.667 0.00 0.00 0.00 4.58
339 340 2.588989 GGCAAGGGAGAGAGGCTG 59.411 66.667 0.00 0.00 0.00 4.85
340 341 1.992277 GGCAAGGGAGAGAGGCTGA 60.992 63.158 0.00 0.00 0.00 4.26
341 342 1.521616 GCAAGGGAGAGAGGCTGAG 59.478 63.158 0.00 0.00 0.00 3.35
342 343 1.970352 GCAAGGGAGAGAGGCTGAGG 61.970 65.000 0.00 0.00 0.00 3.86
343 344 1.002792 AAGGGAGAGAGGCTGAGGG 59.997 63.158 0.00 0.00 0.00 4.30
344 345 2.445654 GGGAGAGAGGCTGAGGGG 60.446 72.222 0.00 0.00 0.00 4.79
345 346 2.693017 GGAGAGAGGCTGAGGGGA 59.307 66.667 0.00 0.00 0.00 4.81
346 347 1.457455 GGAGAGAGGCTGAGGGGAG 60.457 68.421 0.00 0.00 0.00 4.30
347 348 1.309688 GAGAGAGGCTGAGGGGAGT 59.690 63.158 0.00 0.00 0.00 3.85
348 349 1.001503 AGAGAGGCTGAGGGGAGTG 59.998 63.158 0.00 0.00 0.00 3.51
349 350 1.000993 GAGAGGCTGAGGGGAGTGA 59.999 63.158 0.00 0.00 0.00 3.41
350 351 1.001503 AGAGGCTGAGGGGAGTGAG 59.998 63.158 0.00 0.00 0.00 3.51
351 352 2.040278 AGGCTGAGGGGAGTGAGG 59.960 66.667 0.00 0.00 0.00 3.86
352 353 2.039624 GGCTGAGGGGAGTGAGGA 59.960 66.667 0.00 0.00 0.00 3.71
353 354 2.063378 GGCTGAGGGGAGTGAGGAG 61.063 68.421 0.00 0.00 0.00 3.69
354 355 1.000993 GCTGAGGGGAGTGAGGAGA 59.999 63.158 0.00 0.00 0.00 3.71
355 356 0.398381 GCTGAGGGGAGTGAGGAGAT 60.398 60.000 0.00 0.00 0.00 2.75
356 357 1.412079 CTGAGGGGAGTGAGGAGATG 58.588 60.000 0.00 0.00 0.00 2.90
357 358 0.031716 TGAGGGGAGTGAGGAGATGG 60.032 60.000 0.00 0.00 0.00 3.51
358 359 0.031616 GAGGGGAGTGAGGAGATGGT 60.032 60.000 0.00 0.00 0.00 3.55
359 360 0.326048 AGGGGAGTGAGGAGATGGTG 60.326 60.000 0.00 0.00 0.00 4.17
360 361 1.341156 GGGGAGTGAGGAGATGGTGG 61.341 65.000 0.00 0.00 0.00 4.61
361 362 1.341156 GGGAGTGAGGAGATGGTGGG 61.341 65.000 0.00 0.00 0.00 4.61
362 363 0.325671 GGAGTGAGGAGATGGTGGGA 60.326 60.000 0.00 0.00 0.00 4.37
363 364 1.118838 GAGTGAGGAGATGGTGGGAG 58.881 60.000 0.00 0.00 0.00 4.30
364 365 0.415429 AGTGAGGAGATGGTGGGAGT 59.585 55.000 0.00 0.00 0.00 3.85
365 366 0.539051 GTGAGGAGATGGTGGGAGTG 59.461 60.000 0.00 0.00 0.00 3.51
366 367 0.618680 TGAGGAGATGGTGGGAGTGG 60.619 60.000 0.00 0.00 0.00 4.00
367 368 0.618968 GAGGAGATGGTGGGAGTGGT 60.619 60.000 0.00 0.00 0.00 4.16
368 369 0.911525 AGGAGATGGTGGGAGTGGTG 60.912 60.000 0.00 0.00 0.00 4.17
369 370 1.604378 GAGATGGTGGGAGTGGTGG 59.396 63.158 0.00 0.00 0.00 4.61
370 371 2.044946 GATGGTGGGAGTGGTGGC 60.045 66.667 0.00 0.00 0.00 5.01
371 372 2.532715 ATGGTGGGAGTGGTGGCT 60.533 61.111 0.00 0.00 0.00 4.75
372 373 2.826777 GATGGTGGGAGTGGTGGCTG 62.827 65.000 0.00 0.00 0.00 4.85
373 374 4.351054 GGTGGGAGTGGTGGCTGG 62.351 72.222 0.00 0.00 0.00 4.85
374 375 4.351054 GTGGGAGTGGTGGCTGGG 62.351 72.222 0.00 0.00 0.00 4.45
377 378 4.284550 GGAGTGGTGGCTGGGCAA 62.285 66.667 0.00 0.00 0.00 4.52
378 379 2.674380 GAGTGGTGGCTGGGCAAG 60.674 66.667 0.00 0.00 0.00 4.01
379 380 3.177884 AGTGGTGGCTGGGCAAGA 61.178 61.111 0.00 0.00 0.00 3.02
380 381 2.203480 GTGGTGGCTGGGCAAGAA 60.203 61.111 0.00 0.00 0.00 2.52
381 382 2.115910 TGGTGGCTGGGCAAGAAG 59.884 61.111 0.00 0.00 0.00 2.85
382 383 2.436109 GGTGGCTGGGCAAGAAGA 59.564 61.111 0.00 0.00 0.00 2.87
383 384 1.000396 GGTGGCTGGGCAAGAAGAT 60.000 57.895 0.00 0.00 0.00 2.40
384 385 1.318158 GGTGGCTGGGCAAGAAGATG 61.318 60.000 0.00 0.00 0.00 2.90
385 386 0.610232 GTGGCTGGGCAAGAAGATGT 60.610 55.000 0.00 0.00 0.00 3.06
386 387 0.609957 TGGCTGGGCAAGAAGATGTG 60.610 55.000 0.00 0.00 0.00 3.21
387 388 1.318158 GGCTGGGCAAGAAGATGTGG 61.318 60.000 0.00 0.00 0.00 4.17
388 389 1.318158 GCTGGGCAAGAAGATGTGGG 61.318 60.000 0.00 0.00 0.00 4.61
389 390 1.304381 TGGGCAAGAAGATGTGGGC 60.304 57.895 0.00 0.00 0.00 5.36
390 391 2.409870 GGGCAAGAAGATGTGGGCG 61.410 63.158 0.00 0.00 0.00 6.13
391 392 2.409870 GGCAAGAAGATGTGGGCGG 61.410 63.158 0.00 0.00 0.00 6.13
392 393 1.675641 GCAAGAAGATGTGGGCGGT 60.676 57.895 0.00 0.00 0.00 5.68
393 394 1.926511 GCAAGAAGATGTGGGCGGTG 61.927 60.000 0.00 0.00 0.00 4.94
394 395 1.002134 AAGAAGATGTGGGCGGTGG 60.002 57.895 0.00 0.00 0.00 4.61
395 396 3.134127 GAAGATGTGGGCGGTGGC 61.134 66.667 0.00 0.00 38.90 5.01
410 411 4.286320 GGCGACGCATCCGGAGAT 62.286 66.667 23.09 0.00 39.22 2.75
418 419 1.006102 CATCCGGAGATGGTACGGC 60.006 63.158 11.34 0.00 45.30 5.68
419 420 2.561956 ATCCGGAGATGGTACGGCG 61.562 63.158 11.34 4.80 46.78 6.46
420 421 4.280494 CCGGAGATGGTACGGCGG 62.280 72.222 13.24 0.00 41.23 6.13
421 422 4.944372 CGGAGATGGTACGGCGGC 62.944 72.222 13.24 0.00 0.00 6.53
422 423 4.944372 GGAGATGGTACGGCGGCG 62.944 72.222 31.06 31.06 0.00 6.46
440 441 4.863707 CATCCGGAGATGGTGTGG 57.136 61.111 11.34 0.00 45.30 4.17
441 442 1.524621 CATCCGGAGATGGTGTGGC 60.525 63.158 11.34 0.00 45.30 5.01
442 443 1.995066 ATCCGGAGATGGTGTGGCA 60.995 57.895 11.34 0.00 0.00 4.92
443 444 2.257409 ATCCGGAGATGGTGTGGCAC 62.257 60.000 11.34 11.55 0.00 5.01
451 452 2.436646 GGTGTGGCACCGGATCAG 60.437 66.667 16.26 0.00 44.95 2.90
452 453 2.436646 GTGTGGCACCGGATCAGG 60.437 66.667 16.26 10.69 37.30 3.86
453 454 3.716195 TGTGGCACCGGATCAGGG 61.716 66.667 16.26 8.62 35.02 4.45
454 455 4.489771 GTGGCACCGGATCAGGGG 62.490 72.222 16.73 13.66 37.86 4.79
455 456 4.731853 TGGCACCGGATCAGGGGA 62.732 66.667 19.33 0.00 36.61 4.81
456 457 3.407967 GGCACCGGATCAGGGGAA 61.408 66.667 19.33 0.00 36.61 3.97
457 458 2.190578 GCACCGGATCAGGGGAAG 59.809 66.667 19.33 5.04 36.61 3.46
458 459 2.367202 GCACCGGATCAGGGGAAGA 61.367 63.158 19.33 0.00 36.61 2.87
459 460 1.910580 GCACCGGATCAGGGGAAGAA 61.911 60.000 19.33 0.00 36.61 2.52
460 461 0.179000 CACCGGATCAGGGGAAGAAG 59.821 60.000 16.73 0.00 36.61 2.85
461 462 0.042731 ACCGGATCAGGGGAAGAAGA 59.957 55.000 16.73 0.00 35.02 2.87
462 463 0.755686 CCGGATCAGGGGAAGAAGAG 59.244 60.000 3.59 0.00 0.00 2.85
463 464 0.105778 CGGATCAGGGGAAGAAGAGC 59.894 60.000 0.00 0.00 0.00 4.09
464 465 0.105778 GGATCAGGGGAAGAAGAGCG 59.894 60.000 0.00 0.00 0.00 5.03
465 466 1.115467 GATCAGGGGAAGAAGAGCGA 58.885 55.000 0.00 0.00 0.00 4.93
466 467 1.068434 GATCAGGGGAAGAAGAGCGAG 59.932 57.143 0.00 0.00 0.00 5.03
467 468 0.039764 TCAGGGGAAGAAGAGCGAGA 59.960 55.000 0.00 0.00 0.00 4.04
468 469 0.459489 CAGGGGAAGAAGAGCGAGAG 59.541 60.000 0.00 0.00 0.00 3.20
469 470 0.333312 AGGGGAAGAAGAGCGAGAGA 59.667 55.000 0.00 0.00 0.00 3.10
470 471 0.744281 GGGGAAGAAGAGCGAGAGAG 59.256 60.000 0.00 0.00 0.00 3.20
471 472 1.683629 GGGGAAGAAGAGCGAGAGAGA 60.684 57.143 0.00 0.00 0.00 3.10
472 473 1.676006 GGGAAGAAGAGCGAGAGAGAG 59.324 57.143 0.00 0.00 0.00 3.20
473 474 1.676006 GGAAGAAGAGCGAGAGAGAGG 59.324 57.143 0.00 0.00 0.00 3.69
474 475 2.639065 GAAGAAGAGCGAGAGAGAGGA 58.361 52.381 0.00 0.00 0.00 3.71
475 476 2.799126 AGAAGAGCGAGAGAGAGGAA 57.201 50.000 0.00 0.00 0.00 3.36
476 477 2.643551 AGAAGAGCGAGAGAGAGGAAG 58.356 52.381 0.00 0.00 0.00 3.46
477 478 2.238646 AGAAGAGCGAGAGAGAGGAAGA 59.761 50.000 0.00 0.00 0.00 2.87
478 479 2.332063 AGAGCGAGAGAGAGGAAGAG 57.668 55.000 0.00 0.00 0.00 2.85
479 480 1.559682 AGAGCGAGAGAGAGGAAGAGT 59.440 52.381 0.00 0.00 0.00 3.24
480 481 1.670811 GAGCGAGAGAGAGGAAGAGTG 59.329 57.143 0.00 0.00 0.00 3.51
481 482 0.738389 GCGAGAGAGAGGAAGAGTGG 59.262 60.000 0.00 0.00 0.00 4.00
482 483 0.738389 CGAGAGAGAGGAAGAGTGGC 59.262 60.000 0.00 0.00 0.00 5.01
483 484 1.681780 CGAGAGAGAGGAAGAGTGGCT 60.682 57.143 0.00 0.00 0.00 4.75
484 485 1.750778 GAGAGAGAGGAAGAGTGGCTG 59.249 57.143 0.00 0.00 0.00 4.85
485 486 0.175531 GAGAGAGGAAGAGTGGCTGC 59.824 60.000 0.00 0.00 0.00 5.25
486 487 0.543883 AGAGAGGAAGAGTGGCTGCA 60.544 55.000 0.50 0.00 0.00 4.41
487 488 0.540923 GAGAGGAAGAGTGGCTGCAT 59.459 55.000 0.50 0.00 0.00 3.96
488 489 0.540923 AGAGGAAGAGTGGCTGCATC 59.459 55.000 0.50 0.00 32.96 3.91
489 490 0.809241 GAGGAAGAGTGGCTGCATCG 60.809 60.000 0.50 0.00 0.00 3.84
490 491 1.817099 GGAAGAGTGGCTGCATCGG 60.817 63.158 0.50 0.00 0.00 4.18
491 492 1.817099 GAAGAGTGGCTGCATCGGG 60.817 63.158 0.50 0.00 0.00 5.14
492 493 2.244117 GAAGAGTGGCTGCATCGGGA 62.244 60.000 0.50 0.00 0.00 5.14
493 494 2.202987 GAGTGGCTGCATCGGGAG 60.203 66.667 0.50 0.00 35.23 4.30
494 495 2.685017 AGTGGCTGCATCGGGAGA 60.685 61.111 0.50 0.00 46.90 3.71
495 496 2.202987 GTGGCTGCATCGGGAGAG 60.203 66.667 0.50 0.00 45.48 3.20
496 497 2.685017 TGGCTGCATCGGGAGAGT 60.685 61.111 0.50 0.00 45.48 3.24
497 498 2.202987 GGCTGCATCGGGAGAGTG 60.203 66.667 0.50 0.00 45.48 3.51
498 499 2.725312 GGCTGCATCGGGAGAGTGA 61.725 63.158 0.50 0.00 45.48 3.41
499 500 1.219124 GCTGCATCGGGAGAGTGAA 59.781 57.895 0.00 0.00 45.48 3.18
500 501 0.391661 GCTGCATCGGGAGAGTGAAA 60.392 55.000 0.00 0.00 45.48 2.69
501 502 1.945819 GCTGCATCGGGAGAGTGAAAA 60.946 52.381 0.00 0.00 45.48 2.29
502 503 2.005451 CTGCATCGGGAGAGTGAAAAG 58.995 52.381 0.00 0.00 45.48 2.27
503 504 1.339055 TGCATCGGGAGAGTGAAAAGG 60.339 52.381 0.00 0.00 45.48 3.11
504 505 1.066143 GCATCGGGAGAGTGAAAAGGA 60.066 52.381 0.00 0.00 45.48 3.36
505 506 2.898705 CATCGGGAGAGTGAAAAGGAG 58.101 52.381 0.00 0.00 45.48 3.69
506 507 1.267121 TCGGGAGAGTGAAAAGGAGG 58.733 55.000 0.00 0.00 0.00 4.30
507 508 0.250513 CGGGAGAGTGAAAAGGAGGG 59.749 60.000 0.00 0.00 0.00 4.30
508 509 0.621082 GGGAGAGTGAAAAGGAGGGG 59.379 60.000 0.00 0.00 0.00 4.79
509 510 0.621082 GGAGAGTGAAAAGGAGGGGG 59.379 60.000 0.00 0.00 0.00 5.40
510 511 1.363246 GAGAGTGAAAAGGAGGGGGT 58.637 55.000 0.00 0.00 0.00 4.95
511 512 1.003696 GAGAGTGAAAAGGAGGGGGTG 59.996 57.143 0.00 0.00 0.00 4.61
512 513 0.038310 GAGTGAAAAGGAGGGGGTGG 59.962 60.000 0.00 0.00 0.00 4.61
513 514 1.076727 GTGAAAAGGAGGGGGTGGG 59.923 63.158 0.00 0.00 0.00 4.61
514 515 1.388217 TGAAAAGGAGGGGGTGGGT 60.388 57.895 0.00 0.00 0.00 4.51
515 516 1.076727 GAAAAGGAGGGGGTGGGTG 59.923 63.158 0.00 0.00 0.00 4.61
516 517 2.441035 GAAAAGGAGGGGGTGGGTGG 62.441 65.000 0.00 0.00 0.00 4.61
520 521 3.979497 GAGGGGGTGGGTGGGTTG 61.979 72.222 0.00 0.00 0.00 3.77
521 522 4.875301 AGGGGGTGGGTGGGTTGT 62.875 66.667 0.00 0.00 0.00 3.32
522 523 3.840132 GGGGGTGGGTGGGTTGTT 61.840 66.667 0.00 0.00 0.00 2.83
523 524 2.284151 GGGGTGGGTGGGTTGTTT 59.716 61.111 0.00 0.00 0.00 2.83
524 525 1.835267 GGGGTGGGTGGGTTGTTTC 60.835 63.158 0.00 0.00 0.00 2.78
525 526 1.075896 GGGTGGGTGGGTTGTTTCA 60.076 57.895 0.00 0.00 0.00 2.69
526 527 1.112916 GGGTGGGTGGGTTGTTTCAG 61.113 60.000 0.00 0.00 0.00 3.02
527 528 0.106419 GGTGGGTGGGTTGTTTCAGA 60.106 55.000 0.00 0.00 0.00 3.27
528 529 1.686741 GGTGGGTGGGTTGTTTCAGAA 60.687 52.381 0.00 0.00 0.00 3.02
529 530 2.104170 GTGGGTGGGTTGTTTCAGAAA 58.896 47.619 0.00 0.00 0.00 2.52
530 531 2.698274 GTGGGTGGGTTGTTTCAGAAAT 59.302 45.455 0.00 0.00 0.00 2.17
531 532 2.962421 TGGGTGGGTTGTTTCAGAAATC 59.038 45.455 0.00 0.00 0.00 2.17
532 533 2.299013 GGGTGGGTTGTTTCAGAAATCC 59.701 50.000 0.00 3.00 0.00 3.01
533 534 2.030274 GGTGGGTTGTTTCAGAAATCCG 60.030 50.000 0.00 0.00 0.00 4.18
534 535 2.882137 GTGGGTTGTTTCAGAAATCCGA 59.118 45.455 0.00 0.00 0.00 4.55
535 536 2.882137 TGGGTTGTTTCAGAAATCCGAC 59.118 45.455 0.00 0.00 0.00 4.79
536 537 2.228103 GGGTTGTTTCAGAAATCCGACC 59.772 50.000 12.02 12.02 0.00 4.79
537 538 2.882137 GGTTGTTTCAGAAATCCGACCA 59.118 45.455 14.32 0.00 0.00 4.02
538 539 3.506067 GGTTGTTTCAGAAATCCGACCAT 59.494 43.478 14.32 0.00 0.00 3.55
539 540 4.379499 GGTTGTTTCAGAAATCCGACCATC 60.379 45.833 14.32 1.67 0.00 3.51
540 541 3.000041 TGTTTCAGAAATCCGACCATCG 59.000 45.455 0.00 0.00 40.07 3.84
549 550 3.284336 CGACCATCGGACACCTGA 58.716 61.111 0.00 0.00 36.00 3.86
550 551 1.153823 CGACCATCGGACACCTGAC 60.154 63.158 0.00 0.00 36.00 3.51
551 552 1.153823 GACCATCGGACACCTGACG 60.154 63.158 0.00 0.00 0.00 4.35
552 553 2.509336 CCATCGGACACCTGACGC 60.509 66.667 0.00 0.00 0.00 5.19
553 554 2.509336 CATCGGACACCTGACGCC 60.509 66.667 0.00 0.00 0.00 5.68
554 555 2.680352 ATCGGACACCTGACGCCT 60.680 61.111 0.00 0.00 0.00 5.52
555 556 2.711922 ATCGGACACCTGACGCCTC 61.712 63.158 0.00 0.00 0.00 4.70
556 557 4.778415 CGGACACCTGACGCCTCG 62.778 72.222 0.00 0.00 0.00 4.63
557 558 3.371063 GGACACCTGACGCCTCGA 61.371 66.667 0.00 0.00 0.00 4.04
558 559 2.711922 GGACACCTGACGCCTCGAT 61.712 63.158 0.00 0.00 0.00 3.59
559 560 1.226717 GACACCTGACGCCTCGATC 60.227 63.158 0.00 0.00 0.00 3.69
560 561 1.658686 GACACCTGACGCCTCGATCT 61.659 60.000 0.00 0.00 0.00 2.75
561 562 1.226802 CACCTGACGCCTCGATCTG 60.227 63.158 0.00 0.00 0.00 2.90
562 563 2.415010 CCTGACGCCTCGATCTGG 59.585 66.667 0.00 0.00 0.00 3.86
563 564 2.121538 CCTGACGCCTCGATCTGGA 61.122 63.158 4.17 0.00 36.34 3.86
564 565 1.459455 CCTGACGCCTCGATCTGGAT 61.459 60.000 4.17 0.00 36.34 3.41
565 566 0.039617 CTGACGCCTCGATCTGGATC 60.040 60.000 5.89 0.83 34.56 3.36
566 567 1.287503 GACGCCTCGATCTGGATCC 59.712 63.158 4.20 4.20 34.40 3.36
567 568 2.256764 CGCCTCGATCTGGATCCG 59.743 66.667 7.39 2.06 34.40 4.18
568 569 2.261586 CGCCTCGATCTGGATCCGA 61.262 63.158 7.39 7.99 34.40 4.55
569 570 1.287503 GCCTCGATCTGGATCCGAC 59.712 63.158 7.39 0.00 34.40 4.79
570 571 1.576920 CCTCGATCTGGATCCGACG 59.423 63.158 7.39 9.95 34.40 5.12
571 572 1.576920 CTCGATCTGGATCCGACGG 59.423 63.158 7.84 7.84 34.40 4.79
572 573 2.049985 CGATCTGGATCCGACGGC 60.050 66.667 9.66 0.00 34.40 5.68
573 574 2.556459 CGATCTGGATCCGACGGCT 61.556 63.158 9.66 0.00 34.40 5.52
574 575 1.287503 GATCTGGATCCGACGGCTC 59.712 63.158 9.66 9.44 31.76 4.70
575 576 2.148558 GATCTGGATCCGACGGCTCC 62.149 65.000 26.43 26.43 38.39 4.70
576 577 3.917760 CTGGATCCGACGGCTCCC 61.918 72.222 29.06 19.60 37.20 4.30
594 595 4.735132 GCGGGCGTGTGCTCTGTA 62.735 66.667 0.00 0.00 40.44 2.74
595 596 2.048597 CGGGCGTGTGCTCTGTAA 60.049 61.111 0.00 0.00 40.44 2.41
596 597 2.094659 CGGGCGTGTGCTCTGTAAG 61.095 63.158 0.00 0.00 40.44 2.34
597 598 1.292223 GGGCGTGTGCTCTGTAAGA 59.708 57.895 0.00 0.00 43.34 2.10
598 599 1.014564 GGGCGTGTGCTCTGTAAGAC 61.015 60.000 0.00 0.00 37.36 3.01
599 600 0.319555 GGCGTGTGCTCTGTAAGACA 60.320 55.000 0.00 0.00 37.36 3.41
600 601 1.497991 GCGTGTGCTCTGTAAGACAA 58.502 50.000 0.00 0.00 38.67 3.18
601 602 2.069273 GCGTGTGCTCTGTAAGACAAT 58.931 47.619 0.00 0.00 38.67 2.71
602 603 3.250744 GCGTGTGCTCTGTAAGACAATA 58.749 45.455 0.00 0.00 38.67 1.90
603 604 3.304559 GCGTGTGCTCTGTAAGACAATAG 59.695 47.826 0.00 0.00 38.67 1.73
604 605 4.733850 CGTGTGCTCTGTAAGACAATAGA 58.266 43.478 0.00 0.00 38.67 1.98
605 606 4.795795 CGTGTGCTCTGTAAGACAATAGAG 59.204 45.833 0.00 0.00 38.67 2.43
609 610 3.971150 CTCTGTAAGACAATAGAGCCCG 58.029 50.000 0.00 0.00 38.67 6.13
610 611 2.100916 TCTGTAAGACAATAGAGCCCGC 59.899 50.000 0.00 0.00 38.67 6.13
611 612 1.202371 TGTAAGACAATAGAGCCCGCG 60.202 52.381 0.00 0.00 0.00 6.46
612 613 1.066605 GTAAGACAATAGAGCCCGCGA 59.933 52.381 8.23 0.00 0.00 5.87
613 614 0.179108 AAGACAATAGAGCCCGCGAC 60.179 55.000 8.23 0.00 0.00 5.19
614 615 1.591863 GACAATAGAGCCCGCGACC 60.592 63.158 8.23 0.00 0.00 4.79
615 616 2.292794 GACAATAGAGCCCGCGACCA 62.293 60.000 8.23 0.00 0.00 4.02
616 617 1.883084 CAATAGAGCCCGCGACCAC 60.883 63.158 8.23 0.00 0.00 4.16
617 618 2.058595 AATAGAGCCCGCGACCACT 61.059 57.895 8.23 4.31 0.00 4.00
618 619 1.614241 AATAGAGCCCGCGACCACTT 61.614 55.000 8.23 0.00 0.00 3.16
619 620 1.614241 ATAGAGCCCGCGACCACTTT 61.614 55.000 8.23 0.00 0.00 2.66
620 621 1.823169 TAGAGCCCGCGACCACTTTT 61.823 55.000 8.23 0.00 0.00 2.27
621 622 2.203294 AGCCCGCGACCACTTTTT 60.203 55.556 8.23 0.00 0.00 1.94
622 623 0.952010 GAGCCCGCGACCACTTTTTA 60.952 55.000 8.23 0.00 0.00 1.52
623 624 0.535553 AGCCCGCGACCACTTTTTAA 60.536 50.000 8.23 0.00 0.00 1.52
624 625 0.109919 GCCCGCGACCACTTTTTAAG 60.110 55.000 8.23 0.00 0.00 1.85
625 626 1.232119 CCCGCGACCACTTTTTAAGT 58.768 50.000 8.23 0.00 44.06 2.24
626 627 1.605232 CCCGCGACCACTTTTTAAGTT 59.395 47.619 8.23 0.00 40.46 2.66
627 628 2.033675 CCCGCGACCACTTTTTAAGTTT 59.966 45.455 8.23 0.00 40.46 2.66
628 629 3.489568 CCCGCGACCACTTTTTAAGTTTT 60.490 43.478 8.23 0.00 40.46 2.43
629 630 4.261114 CCCGCGACCACTTTTTAAGTTTTA 60.261 41.667 8.23 0.00 40.46 1.52
630 631 4.907582 CCGCGACCACTTTTTAAGTTTTAG 59.092 41.667 8.23 0.00 40.46 1.85
631 632 4.907582 CGCGACCACTTTTTAAGTTTTAGG 59.092 41.667 0.00 0.00 40.46 2.69
632 633 5.217393 GCGACCACTTTTTAAGTTTTAGGG 58.783 41.667 0.00 0.00 40.46 3.53
633 634 5.221106 GCGACCACTTTTTAAGTTTTAGGGT 60.221 40.000 0.00 0.00 40.46 4.34
634 635 6.203647 CGACCACTTTTTAAGTTTTAGGGTG 58.796 40.000 3.99 0.00 40.46 4.61
635 636 6.038492 CGACCACTTTTTAAGTTTTAGGGTGA 59.962 38.462 3.99 0.00 40.46 4.02
636 637 7.415429 CGACCACTTTTTAAGTTTTAGGGTGAA 60.415 37.037 3.99 0.00 40.46 3.18
637 638 8.136563 ACCACTTTTTAAGTTTTAGGGTGAAA 57.863 30.769 0.00 0.00 40.46 2.69
638 639 8.595421 ACCACTTTTTAAGTTTTAGGGTGAAAA 58.405 29.630 0.00 0.00 40.46 2.29
639 640 9.438228 CCACTTTTTAAGTTTTAGGGTGAAAAA 57.562 29.630 0.00 0.00 40.46 1.94
741 1900 4.398598 AAATTCGCGGCCGTGTGC 62.399 61.111 35.52 14.55 40.16 4.57
766 1925 0.179081 GTGCCACCCTAACTCGGATC 60.179 60.000 0.00 0.00 0.00 3.36
785 1945 1.226717 GTCGACTGTGGATCCTCGC 60.227 63.158 14.23 6.56 0.00 5.03
831 2001 2.375146 TGAATCCGACTCCAATCGAGA 58.625 47.619 0.00 0.00 45.13 4.04
856 3574 0.541863 CCTGCGTCTATTTCCACCCT 59.458 55.000 0.00 0.00 0.00 4.34
925 3654 2.142761 CCATCGATCCCCTGCTCCA 61.143 63.158 0.00 0.00 0.00 3.86
1227 3990 0.106619 AGTACCTCTACTGGCCGGAG 60.107 60.000 21.41 9.75 31.46 4.63
1326 4089 3.145551 GTCGGCTTCGAGGGCCTA 61.146 66.667 22.83 13.55 46.73 3.93
1376 4139 0.027716 CTCGTCATGGAGTACGTCGG 59.972 60.000 0.00 0.00 39.99 4.79
1669 4444 1.987855 CTGGGGAAGCGGGACTACA 60.988 63.158 0.00 0.00 0.00 2.74
1762 4573 0.594796 CGATGATGATGACGACGCCA 60.595 55.000 0.00 0.00 0.00 5.69
1763 4586 1.570813 GATGATGATGACGACGCCAA 58.429 50.000 0.00 0.00 0.00 4.52
1864 4731 1.667830 CTGCCGCTCACCGAAAAGA 60.668 57.895 0.00 0.00 40.02 2.52
1872 4739 1.457303 CTCACCGAAAAGACGCTGAAG 59.543 52.381 0.00 0.00 29.62 3.02
1878 4745 0.590195 AAAAGACGCTGAAGCTGCTG 59.410 50.000 1.35 0.00 39.32 4.41
2041 5047 2.217038 TTTGCTGCTCCTCGTCCCT 61.217 57.895 0.00 0.00 0.00 4.20
2043 5049 4.200283 GCTGCTCCTCGTCCCTCG 62.200 72.222 0.00 0.00 41.41 4.63
2205 5252 6.998673 AGTTAAACACTCCAGATTTAGCTGTT 59.001 34.615 0.00 0.00 30.90 3.16
2365 5456 6.265876 TGAATTGTATGTGCCATTATGCAGAT 59.734 34.615 0.00 1.28 45.90 2.90
2434 5529 3.748048 TGTTTACAGATGCTCAGCTTGTC 59.252 43.478 0.00 0.00 0.00 3.18
2437 5532 2.630158 ACAGATGCTCAGCTTGTCATC 58.370 47.619 0.00 9.61 36.49 2.92
2438 5533 2.027469 ACAGATGCTCAGCTTGTCATCA 60.027 45.455 16.53 0.00 38.15 3.07
2460 5556 7.744087 TCAAGTTATAGTGCTCAATTTGTGT 57.256 32.000 0.00 0.00 0.00 3.72
2462 5558 6.500684 AGTTATAGTGCTCAATTTGTGTGG 57.499 37.500 0.00 0.00 0.00 4.17
2523 5623 7.857569 TGTAGTACAAATGTTCTAAGCAACAC 58.142 34.615 0.00 0.00 39.09 3.32
2529 5629 6.701400 ACAAATGTTCTAAGCAACACAAATCC 59.299 34.615 0.00 0.00 39.09 3.01
2530 5630 6.655078 AATGTTCTAAGCAACACAAATCCT 57.345 33.333 0.00 0.00 39.09 3.24
2536 5636 2.233271 AGCAACACAAATCCTGAGTGG 58.767 47.619 0.00 0.00 37.58 4.00
2574 5674 5.183228 GTTAAAATGTCCTGCTAGCTGGTA 58.817 41.667 32.36 24.47 36.57 3.25
2644 5744 5.862924 ATTGGACTTGTTCATGTACTTCG 57.137 39.130 4.01 0.00 0.00 3.79
2657 5757 5.992829 TCATGTACTTCGGTGTATGTGTTTT 59.007 36.000 0.00 0.00 0.00 2.43
2658 5758 6.483974 TCATGTACTTCGGTGTATGTGTTTTT 59.516 34.615 0.00 0.00 0.00 1.94
2659 5759 6.289745 TGTACTTCGGTGTATGTGTTTTTC 57.710 37.500 0.00 0.00 0.00 2.29
2660 5760 4.461992 ACTTCGGTGTATGTGTTTTTCG 57.538 40.909 0.00 0.00 0.00 3.46
2661 5761 4.121317 ACTTCGGTGTATGTGTTTTTCGA 58.879 39.130 0.00 0.00 0.00 3.71
2662 5762 4.571580 ACTTCGGTGTATGTGTTTTTCGAA 59.428 37.500 0.00 0.00 34.83 3.71
2663 5763 5.064962 ACTTCGGTGTATGTGTTTTTCGAAA 59.935 36.000 6.47 6.47 35.48 3.46
2671 7441 3.696898 TGTGTTTTTCGAAATTCCACCG 58.303 40.909 21.98 0.00 0.00 4.94
2765 7537 6.903479 CGGAAATAAGTAGCGTGGTTTTATTC 59.097 38.462 0.00 0.00 0.00 1.75
2801 7573 6.815142 ACTAAACCACACCACTTATATTCGAC 59.185 38.462 0.00 0.00 0.00 4.20
2803 7575 4.501071 ACCACACCACTTATATTCGACAC 58.499 43.478 0.00 0.00 0.00 3.67
2804 7576 4.222145 ACCACACCACTTATATTCGACACT 59.778 41.667 0.00 0.00 0.00 3.55
2805 7577 5.175859 CCACACCACTTATATTCGACACTT 58.824 41.667 0.00 0.00 0.00 3.16
2806 7578 6.071221 ACCACACCACTTATATTCGACACTTA 60.071 38.462 0.00 0.00 0.00 2.24
2807 7579 6.984474 CCACACCACTTATATTCGACACTTAT 59.016 38.462 0.00 0.00 0.00 1.73
2808 7580 8.139350 CCACACCACTTATATTCGACACTTATA 58.861 37.037 0.00 0.00 0.00 0.98
2809 7581 9.692749 CACACCACTTATATTCGACACTTATAT 57.307 33.333 0.00 0.00 0.00 0.86
2812 7584 9.622004 ACCACTTATATTCGACACTTATATTCG 57.378 33.333 0.00 0.00 0.00 3.34
2813 7585 9.836076 CCACTTATATTCGACACTTATATTCGA 57.164 33.333 0.00 0.00 39.91 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
121 122 0.108186 TCTTGCAACATCGCGGAGAT 60.108 50.000 6.13 0.00 41.01 2.75
122 123 0.737367 CTCTTGCAACATCGCGGAGA 60.737 55.000 6.13 0.00 36.86 3.71
123 124 0.737367 TCTCTTGCAACATCGCGGAG 60.737 55.000 6.13 0.86 36.40 4.63
124 125 0.108186 ATCTCTTGCAACATCGCGGA 60.108 50.000 6.13 0.00 33.35 5.54
125 126 0.027194 CATCTCTTGCAACATCGCGG 59.973 55.000 6.13 0.00 33.35 6.46
126 127 3.504043 CATCTCTTGCAACATCGCG 57.496 52.632 0.00 0.00 33.35 5.87
136 137 0.530211 CAGGAGCTCCGCATCTCTTG 60.530 60.000 26.95 13.23 42.08 3.02
137 138 1.821936 CAGGAGCTCCGCATCTCTT 59.178 57.895 26.95 3.86 42.08 2.85
138 139 2.795110 GCAGGAGCTCCGCATCTCT 61.795 63.158 31.47 12.59 42.08 3.10
139 140 2.280052 GCAGGAGCTCCGCATCTC 60.280 66.667 31.47 15.48 42.08 2.75
140 141 3.079478 TGCAGGAGCTCCGCATCT 61.079 61.111 33.74 15.39 42.74 2.90
141 142 2.588314 CTGCAGGAGCTCCGCATC 60.588 66.667 35.70 23.41 41.79 3.91
142 143 4.853050 GCTGCAGGAGCTCCGCAT 62.853 66.667 35.70 17.76 45.21 4.73
150 151 1.971505 TATTCGGGTGGCTGCAGGAG 61.972 60.000 17.12 0.00 0.00 3.69
151 152 1.971505 CTATTCGGGTGGCTGCAGGA 61.972 60.000 17.12 0.00 0.00 3.86
152 153 1.524621 CTATTCGGGTGGCTGCAGG 60.525 63.158 17.12 0.00 0.00 4.85
153 154 2.182842 GCTATTCGGGTGGCTGCAG 61.183 63.158 10.11 10.11 0.00 4.41
154 155 2.124736 GCTATTCGGGTGGCTGCA 60.125 61.111 0.50 0.00 0.00 4.41
155 156 2.124736 TGCTATTCGGGTGGCTGC 60.125 61.111 0.00 0.00 0.00 5.25
156 157 1.078497 TGTGCTATTCGGGTGGCTG 60.078 57.895 0.00 0.00 0.00 4.85
157 158 1.078426 GTGTGCTATTCGGGTGGCT 60.078 57.895 0.00 0.00 0.00 4.75
158 159 2.112815 GGTGTGCTATTCGGGTGGC 61.113 63.158 0.00 0.00 0.00 5.01
159 160 1.813753 CGGTGTGCTATTCGGGTGG 60.814 63.158 0.00 0.00 0.00 4.61
160 161 2.461110 GCGGTGTGCTATTCGGGTG 61.461 63.158 0.00 0.00 41.73 4.61
161 162 2.125269 GCGGTGTGCTATTCGGGT 60.125 61.111 0.00 0.00 41.73 5.28
162 163 3.261951 CGCGGTGTGCTATTCGGG 61.262 66.667 0.00 0.00 43.27 5.14
163 164 3.261951 CCGCGGTGTGCTATTCGG 61.262 66.667 19.50 0.00 43.27 4.30
164 165 3.261951 CCCGCGGTGTGCTATTCG 61.262 66.667 26.12 0.00 43.27 3.34
165 166 2.895372 CCCCGCGGTGTGCTATTC 60.895 66.667 26.12 0.00 43.27 1.75
196 197 4.697756 TCGCAAGGTGCCCTTCCG 62.698 66.667 10.12 10.12 45.18 4.30
197 198 2.747855 CTCGCAAGGTGCCCTTCC 60.748 66.667 3.71 0.00 42.67 3.46
198 199 2.747855 CCTCGCAAGGTGCCCTTC 60.748 66.667 3.71 0.30 42.67 3.46
199 200 3.249189 TCCTCGCAAGGTGCCCTT 61.249 61.111 0.00 0.99 45.88 3.95
200 201 3.710722 CTCCTCGCAAGGTGCCCT 61.711 66.667 0.00 0.00 43.82 5.19
201 202 3.959991 GACTCCTCGCAAGGTGCCC 62.960 68.421 0.00 0.00 43.82 5.36
202 203 2.435059 GACTCCTCGCAAGGTGCC 60.435 66.667 0.00 0.00 43.82 5.01
203 204 2.811317 CGACTCCTCGCAAGGTGC 60.811 66.667 0.00 0.00 43.82 5.01
204 205 1.444553 GTCGACTCCTCGCAAGGTG 60.445 63.158 8.70 0.00 43.82 4.00
205 206 2.963371 GTCGACTCCTCGCAAGGT 59.037 61.111 8.70 0.00 43.82 3.50
206 207 2.202492 CGTCGACTCCTCGCAAGG 60.202 66.667 14.70 0.00 44.89 3.61
207 208 2.202492 CCGTCGACTCCTCGCAAG 60.202 66.667 14.70 0.00 39.96 4.01
208 209 4.415332 GCCGTCGACTCCTCGCAA 62.415 66.667 14.70 0.00 39.96 4.85
211 212 2.427325 GATACGCCGTCGACTCCTCG 62.427 65.000 14.70 13.00 41.65 4.63
212 213 1.159098 AGATACGCCGTCGACTCCTC 61.159 60.000 14.70 2.07 39.41 3.71
213 214 1.153208 AGATACGCCGTCGACTCCT 60.153 57.895 14.70 0.00 39.41 3.69
214 215 1.009900 CAGATACGCCGTCGACTCC 60.010 63.158 14.70 3.09 39.41 3.85
215 216 0.042013 CTCAGATACGCCGTCGACTC 60.042 60.000 14.70 2.91 39.41 3.36
216 217 1.437772 CCTCAGATACGCCGTCGACT 61.438 60.000 14.70 0.00 39.41 4.18
217 218 1.009900 CCTCAGATACGCCGTCGAC 60.010 63.158 5.18 5.18 39.41 4.20
218 219 1.153309 TCCTCAGATACGCCGTCGA 60.153 57.895 0.00 0.00 39.41 4.20
219 220 1.009900 GTCCTCAGATACGCCGTCG 60.010 63.158 0.00 0.00 42.43 5.12
220 221 0.669077 ATGTCCTCAGATACGCCGTC 59.331 55.000 0.00 0.00 0.00 4.79
221 222 0.385751 CATGTCCTCAGATACGCCGT 59.614 55.000 0.00 0.00 0.00 5.68
222 223 0.319040 CCATGTCCTCAGATACGCCG 60.319 60.000 0.00 0.00 0.00 6.46
223 224 0.601311 GCCATGTCCTCAGATACGCC 60.601 60.000 0.00 0.00 0.00 5.68
224 225 0.601311 GGCCATGTCCTCAGATACGC 60.601 60.000 0.00 0.00 0.00 4.42
225 226 0.319040 CGGCCATGTCCTCAGATACG 60.319 60.000 2.24 0.00 0.00 3.06
226 227 0.753262 ACGGCCATGTCCTCAGATAC 59.247 55.000 2.24 0.00 0.00 2.24
227 228 1.040646 GACGGCCATGTCCTCAGATA 58.959 55.000 2.24 0.00 32.61 1.98
228 229 0.977627 TGACGGCCATGTCCTCAGAT 60.978 55.000 2.24 0.00 38.11 2.90
229 230 1.607801 CTGACGGCCATGTCCTCAGA 61.608 60.000 13.68 0.00 38.11 3.27
230 231 1.153489 CTGACGGCCATGTCCTCAG 60.153 63.158 2.24 7.53 38.11 3.35
231 232 2.981302 CTGACGGCCATGTCCTCA 59.019 61.111 2.24 0.00 38.11 3.86
232 233 2.512515 GCTGACGGCCATGTCCTC 60.513 66.667 2.24 0.00 38.11 3.71
244 245 3.470567 CTTGTCGTCGCGGCTGAC 61.471 66.667 22.50 22.50 35.49 3.51
245 246 3.666253 TCTTGTCGTCGCGGCTGA 61.666 61.111 9.90 4.98 30.55 4.26
246 247 3.470567 GTCTTGTCGTCGCGGCTG 61.471 66.667 9.90 2.12 30.55 4.85
247 248 3.898627 CTGTCTTGTCGTCGCGGCT 62.899 63.158 9.90 0.00 30.55 5.52
248 249 3.470567 CTGTCTTGTCGTCGCGGC 61.471 66.667 6.13 1.93 0.00 6.53
249 250 3.470567 GCTGTCTTGTCGTCGCGG 61.471 66.667 6.13 0.00 0.00 6.46
250 251 3.816920 CGCTGTCTTGTCGTCGCG 61.817 66.667 0.00 0.00 34.50 5.87
251 252 3.470567 CCGCTGTCTTGTCGTCGC 61.471 66.667 0.00 0.00 0.00 5.19
252 253 2.050351 ACCGCTGTCTTGTCGTCG 60.050 61.111 0.00 0.00 0.00 5.12
253 254 1.299926 ACACCGCTGTCTTGTCGTC 60.300 57.895 0.00 0.00 0.00 4.20
254 255 1.591594 CACACCGCTGTCTTGTCGT 60.592 57.895 0.00 0.00 0.00 4.34
255 256 2.943345 GCACACCGCTGTCTTGTCG 61.943 63.158 0.00 0.00 37.77 4.35
256 257 1.230635 ATGCACACCGCTGTCTTGTC 61.231 55.000 0.00 0.00 43.06 3.18
257 258 1.227943 ATGCACACCGCTGTCTTGT 60.228 52.632 0.00 0.00 43.06 3.16
258 259 1.499056 GATGCACACCGCTGTCTTG 59.501 57.895 0.00 0.00 43.06 3.02
259 260 2.029288 CGATGCACACCGCTGTCTT 61.029 57.895 0.00 0.00 43.06 3.01
260 261 2.433145 CGATGCACACCGCTGTCT 60.433 61.111 0.00 0.00 43.06 3.41
261 262 2.738521 ACGATGCACACCGCTGTC 60.739 61.111 0.00 0.00 43.06 3.51
262 263 3.043713 CACGATGCACACCGCTGT 61.044 61.111 0.00 0.00 43.06 4.40
263 264 3.792047 CCACGATGCACACCGCTG 61.792 66.667 0.00 0.00 43.06 5.18
264 265 3.315142 ATCCACGATGCACACCGCT 62.315 57.895 0.00 0.00 43.06 5.52
265 266 2.813179 GATCCACGATGCACACCGC 61.813 63.158 0.00 0.00 42.89 5.68
266 267 1.153568 AGATCCACGATGCACACCG 60.154 57.895 0.00 0.00 0.00 4.94
267 268 1.091771 CCAGATCCACGATGCACACC 61.092 60.000 0.00 0.00 0.00 4.16
268 269 1.709147 GCCAGATCCACGATGCACAC 61.709 60.000 0.00 0.00 0.00 3.82
269 270 1.450134 GCCAGATCCACGATGCACA 60.450 57.895 0.00 0.00 0.00 4.57
270 271 2.182842 GGCCAGATCCACGATGCAC 61.183 63.158 0.00 0.00 0.00 4.57
271 272 2.190313 GGCCAGATCCACGATGCA 59.810 61.111 0.00 0.00 0.00 3.96
272 273 2.969238 CGGCCAGATCCACGATGC 60.969 66.667 2.24 0.00 0.00 3.91
273 274 1.592669 GACGGCCAGATCCACGATG 60.593 63.158 2.24 0.00 0.00 3.84
274 275 2.815308 GACGGCCAGATCCACGAT 59.185 61.111 2.24 0.00 0.00 3.73
275 276 3.822192 CGACGGCCAGATCCACGA 61.822 66.667 2.24 0.00 0.00 4.35
276 277 4.873129 CCGACGGCCAGATCCACG 62.873 72.222 2.24 0.00 0.00 4.94
287 288 4.803426 GAGCAGGTGAGCCGACGG 62.803 72.222 10.29 10.29 40.50 4.79
288 289 2.842394 ATTGAGCAGGTGAGCCGACG 62.842 60.000 0.00 0.00 40.50 5.12
289 290 1.078848 ATTGAGCAGGTGAGCCGAC 60.079 57.895 0.00 0.00 40.50 4.79
290 291 1.219124 GATTGAGCAGGTGAGCCGA 59.781 57.895 0.00 0.00 40.50 5.54
291 292 0.392193 AAGATTGAGCAGGTGAGCCG 60.392 55.000 0.00 0.00 40.50 5.52
292 293 1.093159 CAAGATTGAGCAGGTGAGCC 58.907 55.000 0.00 0.00 34.23 4.70
293 294 2.105006 TCAAGATTGAGCAGGTGAGC 57.895 50.000 0.00 0.00 32.50 4.26
294 295 2.419324 GCTTCAAGATTGAGCAGGTGAG 59.581 50.000 10.27 0.13 38.61 3.51
295 296 2.430465 GCTTCAAGATTGAGCAGGTGA 58.570 47.619 10.27 0.00 38.61 4.02
296 297 1.471684 GGCTTCAAGATTGAGCAGGTG 59.528 52.381 14.56 0.00 38.61 4.00
297 298 1.615384 GGGCTTCAAGATTGAGCAGGT 60.615 52.381 14.56 0.00 38.61 4.00
298 299 1.101331 GGGCTTCAAGATTGAGCAGG 58.899 55.000 14.56 2.78 38.61 4.85
299 300 1.101331 GGGGCTTCAAGATTGAGCAG 58.899 55.000 14.56 5.16 38.61 4.24
300 301 0.405198 TGGGGCTTCAAGATTGAGCA 59.595 50.000 14.56 0.00 38.61 4.26
301 302 0.813821 GTGGGGCTTCAAGATTGAGC 59.186 55.000 0.00 7.88 38.61 4.26
302 303 1.089920 CGTGGGGCTTCAAGATTGAG 58.910 55.000 0.00 0.00 38.61 3.02
303 304 0.322456 CCGTGGGGCTTCAAGATTGA 60.322 55.000 0.00 0.00 34.92 2.57
304 305 1.315257 CCCGTGGGGCTTCAAGATTG 61.315 60.000 0.00 0.00 35.35 2.67
305 306 1.000896 CCCGTGGGGCTTCAAGATT 60.001 57.895 0.00 0.00 35.35 2.40
306 307 2.677228 CCCGTGGGGCTTCAAGAT 59.323 61.111 0.00 0.00 35.35 2.40
316 317 4.101448 CTCTCCCTTGCCCGTGGG 62.101 72.222 0.00 0.00 44.66 4.61
317 318 3.003173 TCTCTCCCTTGCCCGTGG 61.003 66.667 0.00 0.00 0.00 4.94
318 319 2.581354 CTCTCTCCCTTGCCCGTG 59.419 66.667 0.00 0.00 0.00 4.94
319 320 2.685380 CCTCTCTCCCTTGCCCGT 60.685 66.667 0.00 0.00 0.00 5.28
320 321 4.168291 GCCTCTCTCCCTTGCCCG 62.168 72.222 0.00 0.00 0.00 6.13
321 322 2.690510 AGCCTCTCTCCCTTGCCC 60.691 66.667 0.00 0.00 0.00 5.36
322 323 1.970352 CTCAGCCTCTCTCCCTTGCC 61.970 65.000 0.00 0.00 0.00 4.52
323 324 1.521616 CTCAGCCTCTCTCCCTTGC 59.478 63.158 0.00 0.00 0.00 4.01
324 325 1.336632 CCCTCAGCCTCTCTCCCTTG 61.337 65.000 0.00 0.00 0.00 3.61
325 326 1.002792 CCCTCAGCCTCTCTCCCTT 59.997 63.158 0.00 0.00 0.00 3.95
326 327 2.695597 CCCTCAGCCTCTCTCCCT 59.304 66.667 0.00 0.00 0.00 4.20
327 328 2.445654 CCCCTCAGCCTCTCTCCC 60.446 72.222 0.00 0.00 0.00 4.30
328 329 1.457455 CTCCCCTCAGCCTCTCTCC 60.457 68.421 0.00 0.00 0.00 3.71
329 330 1.042559 CACTCCCCTCAGCCTCTCTC 61.043 65.000 0.00 0.00 0.00 3.20
330 331 1.001503 CACTCCCCTCAGCCTCTCT 59.998 63.158 0.00 0.00 0.00 3.10
331 332 1.000993 TCACTCCCCTCAGCCTCTC 59.999 63.158 0.00 0.00 0.00 3.20
332 333 1.001503 CTCACTCCCCTCAGCCTCT 59.998 63.158 0.00 0.00 0.00 3.69
333 334 2.063378 CCTCACTCCCCTCAGCCTC 61.063 68.421 0.00 0.00 0.00 4.70
334 335 2.040278 CCTCACTCCCCTCAGCCT 59.960 66.667 0.00 0.00 0.00 4.58
335 336 2.039624 TCCTCACTCCCCTCAGCC 59.960 66.667 0.00 0.00 0.00 4.85
336 337 0.398381 ATCTCCTCACTCCCCTCAGC 60.398 60.000 0.00 0.00 0.00 4.26
337 338 1.412079 CATCTCCTCACTCCCCTCAG 58.588 60.000 0.00 0.00 0.00 3.35
338 339 0.031716 CCATCTCCTCACTCCCCTCA 60.032 60.000 0.00 0.00 0.00 3.86
339 340 0.031616 ACCATCTCCTCACTCCCCTC 60.032 60.000 0.00 0.00 0.00 4.30
340 341 0.326048 CACCATCTCCTCACTCCCCT 60.326 60.000 0.00 0.00 0.00 4.79
341 342 1.341156 CCACCATCTCCTCACTCCCC 61.341 65.000 0.00 0.00 0.00 4.81
342 343 1.341156 CCCACCATCTCCTCACTCCC 61.341 65.000 0.00 0.00 0.00 4.30
343 344 0.325671 TCCCACCATCTCCTCACTCC 60.326 60.000 0.00 0.00 0.00 3.85
344 345 1.118838 CTCCCACCATCTCCTCACTC 58.881 60.000 0.00 0.00 0.00 3.51
345 346 0.415429 ACTCCCACCATCTCCTCACT 59.585 55.000 0.00 0.00 0.00 3.41
346 347 0.539051 CACTCCCACCATCTCCTCAC 59.461 60.000 0.00 0.00 0.00 3.51
347 348 0.618680 CCACTCCCACCATCTCCTCA 60.619 60.000 0.00 0.00 0.00 3.86
348 349 0.618968 ACCACTCCCACCATCTCCTC 60.619 60.000 0.00 0.00 0.00 3.71
349 350 0.911525 CACCACTCCCACCATCTCCT 60.912 60.000 0.00 0.00 0.00 3.69
350 351 1.604378 CACCACTCCCACCATCTCC 59.396 63.158 0.00 0.00 0.00 3.71
351 352 1.604378 CCACCACTCCCACCATCTC 59.396 63.158 0.00 0.00 0.00 2.75
352 353 2.606587 GCCACCACTCCCACCATCT 61.607 63.158 0.00 0.00 0.00 2.90
353 354 2.044946 GCCACCACTCCCACCATC 60.045 66.667 0.00 0.00 0.00 3.51
354 355 2.532715 AGCCACCACTCCCACCAT 60.533 61.111 0.00 0.00 0.00 3.55
355 356 3.569210 CAGCCACCACTCCCACCA 61.569 66.667 0.00 0.00 0.00 4.17
356 357 4.351054 CCAGCCACCACTCCCACC 62.351 72.222 0.00 0.00 0.00 4.61
357 358 4.351054 CCCAGCCACCACTCCCAC 62.351 72.222 0.00 0.00 0.00 4.61
360 361 4.284550 TTGCCCAGCCACCACTCC 62.285 66.667 0.00 0.00 0.00 3.85
361 362 2.674380 CTTGCCCAGCCACCACTC 60.674 66.667 0.00 0.00 0.00 3.51
362 363 2.703675 CTTCTTGCCCAGCCACCACT 62.704 60.000 0.00 0.00 0.00 4.00
363 364 2.203480 TTCTTGCCCAGCCACCAC 60.203 61.111 0.00 0.00 0.00 4.16
364 365 1.792757 ATCTTCTTGCCCAGCCACCA 61.793 55.000 0.00 0.00 0.00 4.17
365 366 1.000396 ATCTTCTTGCCCAGCCACC 60.000 57.895 0.00 0.00 0.00 4.61
366 367 0.610232 ACATCTTCTTGCCCAGCCAC 60.610 55.000 0.00 0.00 0.00 5.01
367 368 0.609957 CACATCTTCTTGCCCAGCCA 60.610 55.000 0.00 0.00 0.00 4.75
368 369 1.318158 CCACATCTTCTTGCCCAGCC 61.318 60.000 0.00 0.00 0.00 4.85
369 370 1.318158 CCCACATCTTCTTGCCCAGC 61.318 60.000 0.00 0.00 0.00 4.85
370 371 1.318158 GCCCACATCTTCTTGCCCAG 61.318 60.000 0.00 0.00 0.00 4.45
371 372 1.304381 GCCCACATCTTCTTGCCCA 60.304 57.895 0.00 0.00 0.00 5.36
372 373 2.409870 CGCCCACATCTTCTTGCCC 61.410 63.158 0.00 0.00 0.00 5.36
373 374 2.409870 CCGCCCACATCTTCTTGCC 61.410 63.158 0.00 0.00 0.00 4.52
374 375 1.675641 ACCGCCCACATCTTCTTGC 60.676 57.895 0.00 0.00 0.00 4.01
375 376 1.308069 CCACCGCCCACATCTTCTTG 61.308 60.000 0.00 0.00 0.00 3.02
376 377 1.002134 CCACCGCCCACATCTTCTT 60.002 57.895 0.00 0.00 0.00 2.52
377 378 2.671070 CCACCGCCCACATCTTCT 59.329 61.111 0.00 0.00 0.00 2.85
378 379 3.134127 GCCACCGCCCACATCTTC 61.134 66.667 0.00 0.00 0.00 2.87
393 394 4.286320 ATCTCCGGATGCGTCGCC 62.286 66.667 15.88 0.00 0.00 5.54
394 395 3.032609 CATCTCCGGATGCGTCGC 61.033 66.667 11.10 11.10 42.12 5.19
395 396 1.792118 TACCATCTCCGGATGCGTCG 61.792 60.000 3.57 0.00 45.73 5.12
396 397 0.318784 GTACCATCTCCGGATGCGTC 60.319 60.000 3.57 0.00 45.73 5.19
397 398 1.740285 GTACCATCTCCGGATGCGT 59.260 57.895 3.57 4.59 45.73 5.24
398 399 1.371758 CGTACCATCTCCGGATGCG 60.372 63.158 3.57 0.28 45.73 4.73
399 400 1.006102 CCGTACCATCTCCGGATGC 60.006 63.158 3.57 0.00 45.73 3.91
400 401 1.006102 GCCGTACCATCTCCGGATG 60.006 63.158 3.57 0.00 46.41 3.51
401 402 2.561956 CGCCGTACCATCTCCGGAT 61.562 63.158 3.57 0.00 44.41 4.18
402 403 3.214123 CGCCGTACCATCTCCGGA 61.214 66.667 2.93 2.93 44.41 5.14
403 404 4.280494 CCGCCGTACCATCTCCGG 62.280 72.222 0.00 0.00 44.46 5.14
404 405 4.944372 GCCGCCGTACCATCTCCG 62.944 72.222 0.00 0.00 0.00 4.63
405 406 4.944372 CGCCGCCGTACCATCTCC 62.944 72.222 0.00 0.00 0.00 3.71
419 420 4.241555 ACCATCTCCGGATGCGCC 62.242 66.667 3.57 0.00 45.73 6.53
420 421 2.969238 CACCATCTCCGGATGCGC 60.969 66.667 3.57 0.00 45.73 6.09
421 422 1.884464 CACACCATCTCCGGATGCG 60.884 63.158 3.57 0.00 45.73 4.73
422 423 1.524621 CCACACCATCTCCGGATGC 60.525 63.158 3.57 0.00 45.73 3.91
423 424 1.524621 GCCACACCATCTCCGGATG 60.525 63.158 3.57 1.65 46.41 3.51
424 425 1.995066 TGCCACACCATCTCCGGAT 60.995 57.895 3.57 0.00 0.00 4.18
425 426 2.606213 TGCCACACCATCTCCGGA 60.606 61.111 2.93 2.93 0.00 5.14
426 427 2.436646 GTGCCACACCATCTCCGG 60.437 66.667 0.00 0.00 0.00 5.14
435 436 2.436646 CCTGATCCGGTGCCACAC 60.437 66.667 0.00 0.00 0.00 3.82
436 437 3.716195 CCCTGATCCGGTGCCACA 61.716 66.667 0.00 0.00 0.00 4.17
437 438 4.489771 CCCCTGATCCGGTGCCAC 62.490 72.222 0.00 0.00 0.00 5.01
438 439 4.731853 TCCCCTGATCCGGTGCCA 62.732 66.667 0.00 0.00 0.00 4.92
439 440 3.406595 CTTCCCCTGATCCGGTGCC 62.407 68.421 0.00 0.00 0.00 5.01
440 441 1.910580 TTCTTCCCCTGATCCGGTGC 61.911 60.000 0.00 0.00 0.00 5.01
441 442 0.179000 CTTCTTCCCCTGATCCGGTG 59.821 60.000 0.00 0.00 0.00 4.94
442 443 0.042731 TCTTCTTCCCCTGATCCGGT 59.957 55.000 0.00 0.00 0.00 5.28
443 444 0.755686 CTCTTCTTCCCCTGATCCGG 59.244 60.000 0.00 0.00 0.00 5.14
444 445 0.105778 GCTCTTCTTCCCCTGATCCG 59.894 60.000 0.00 0.00 0.00 4.18
445 446 0.105778 CGCTCTTCTTCCCCTGATCC 59.894 60.000 0.00 0.00 0.00 3.36
446 447 1.068434 CTCGCTCTTCTTCCCCTGATC 59.932 57.143 0.00 0.00 0.00 2.92
447 448 1.118838 CTCGCTCTTCTTCCCCTGAT 58.881 55.000 0.00 0.00 0.00 2.90
448 449 0.039764 TCTCGCTCTTCTTCCCCTGA 59.960 55.000 0.00 0.00 0.00 3.86
449 450 0.459489 CTCTCGCTCTTCTTCCCCTG 59.541 60.000 0.00 0.00 0.00 4.45
450 451 0.333312 TCTCTCGCTCTTCTTCCCCT 59.667 55.000 0.00 0.00 0.00 4.79
451 452 0.744281 CTCTCTCGCTCTTCTTCCCC 59.256 60.000 0.00 0.00 0.00 4.81
452 453 1.676006 CTCTCTCTCGCTCTTCTTCCC 59.324 57.143 0.00 0.00 0.00 3.97
453 454 1.676006 CCTCTCTCTCGCTCTTCTTCC 59.324 57.143 0.00 0.00 0.00 3.46
454 455 2.639065 TCCTCTCTCTCGCTCTTCTTC 58.361 52.381 0.00 0.00 0.00 2.87
455 456 2.799126 TCCTCTCTCTCGCTCTTCTT 57.201 50.000 0.00 0.00 0.00 2.52
456 457 2.238646 TCTTCCTCTCTCTCGCTCTTCT 59.761 50.000 0.00 0.00 0.00 2.85
457 458 2.614057 CTCTTCCTCTCTCTCGCTCTTC 59.386 54.545 0.00 0.00 0.00 2.87
458 459 2.026262 ACTCTTCCTCTCTCTCGCTCTT 60.026 50.000 0.00 0.00 0.00 2.85
459 460 1.559682 ACTCTTCCTCTCTCTCGCTCT 59.440 52.381 0.00 0.00 0.00 4.09
460 461 1.670811 CACTCTTCCTCTCTCTCGCTC 59.329 57.143 0.00 0.00 0.00 5.03
461 462 1.681780 CCACTCTTCCTCTCTCTCGCT 60.682 57.143 0.00 0.00 0.00 4.93
462 463 0.738389 CCACTCTTCCTCTCTCTCGC 59.262 60.000 0.00 0.00 0.00 5.03
463 464 0.738389 GCCACTCTTCCTCTCTCTCG 59.262 60.000 0.00 0.00 0.00 4.04
464 465 1.750778 CAGCCACTCTTCCTCTCTCTC 59.249 57.143 0.00 0.00 0.00 3.20
465 466 1.851304 CAGCCACTCTTCCTCTCTCT 58.149 55.000 0.00 0.00 0.00 3.10
466 467 0.175531 GCAGCCACTCTTCCTCTCTC 59.824 60.000 0.00 0.00 0.00 3.20
467 468 0.543883 TGCAGCCACTCTTCCTCTCT 60.544 55.000 0.00 0.00 0.00 3.10
468 469 0.540923 ATGCAGCCACTCTTCCTCTC 59.459 55.000 0.00 0.00 0.00 3.20
469 470 0.540923 GATGCAGCCACTCTTCCTCT 59.459 55.000 0.00 0.00 0.00 3.69
470 471 0.809241 CGATGCAGCCACTCTTCCTC 60.809 60.000 0.00 0.00 0.00 3.71
471 472 1.220206 CGATGCAGCCACTCTTCCT 59.780 57.895 0.00 0.00 0.00 3.36
472 473 1.817099 CCGATGCAGCCACTCTTCC 60.817 63.158 0.00 0.00 0.00 3.46
473 474 1.817099 CCCGATGCAGCCACTCTTC 60.817 63.158 0.00 0.00 0.00 2.87
474 475 2.249413 CTCCCGATGCAGCCACTCTT 62.249 60.000 0.00 0.00 0.00 2.85
475 476 2.685017 TCCCGATGCAGCCACTCT 60.685 61.111 0.00 0.00 0.00 3.24
476 477 2.202987 CTCCCGATGCAGCCACTC 60.203 66.667 0.00 0.00 0.00 3.51
477 478 2.685017 TCTCCCGATGCAGCCACT 60.685 61.111 0.00 0.00 0.00 4.00
478 479 2.202987 CTCTCCCGATGCAGCCAC 60.203 66.667 0.00 0.00 0.00 5.01
479 480 2.685017 ACTCTCCCGATGCAGCCA 60.685 61.111 0.00 0.00 0.00 4.75
480 481 2.202987 CACTCTCCCGATGCAGCC 60.203 66.667 0.00 0.00 0.00 4.85
481 482 0.391661 TTTCACTCTCCCGATGCAGC 60.392 55.000 0.00 0.00 0.00 5.25
482 483 2.005451 CTTTTCACTCTCCCGATGCAG 58.995 52.381 0.00 0.00 0.00 4.41
483 484 1.339055 CCTTTTCACTCTCCCGATGCA 60.339 52.381 0.00 0.00 0.00 3.96
484 485 1.066143 TCCTTTTCACTCTCCCGATGC 60.066 52.381 0.00 0.00 0.00 3.91
485 486 2.419297 CCTCCTTTTCACTCTCCCGATG 60.419 54.545 0.00 0.00 0.00 3.84
486 487 1.834263 CCTCCTTTTCACTCTCCCGAT 59.166 52.381 0.00 0.00 0.00 4.18
487 488 1.267121 CCTCCTTTTCACTCTCCCGA 58.733 55.000 0.00 0.00 0.00 5.14
488 489 0.250513 CCCTCCTTTTCACTCTCCCG 59.749 60.000 0.00 0.00 0.00 5.14
489 490 0.621082 CCCCTCCTTTTCACTCTCCC 59.379 60.000 0.00 0.00 0.00 4.30
490 491 0.621082 CCCCCTCCTTTTCACTCTCC 59.379 60.000 0.00 0.00 0.00 3.71
491 492 1.003696 CACCCCCTCCTTTTCACTCTC 59.996 57.143 0.00 0.00 0.00 3.20
492 493 1.068121 CACCCCCTCCTTTTCACTCT 58.932 55.000 0.00 0.00 0.00 3.24
493 494 0.038310 CCACCCCCTCCTTTTCACTC 59.962 60.000 0.00 0.00 0.00 3.51
494 495 1.435346 CCCACCCCCTCCTTTTCACT 61.435 60.000 0.00 0.00 0.00 3.41
495 496 1.076727 CCCACCCCCTCCTTTTCAC 59.923 63.158 0.00 0.00 0.00 3.18
496 497 1.388217 ACCCACCCCCTCCTTTTCA 60.388 57.895 0.00 0.00 0.00 2.69
497 498 1.076727 CACCCACCCCCTCCTTTTC 59.923 63.158 0.00 0.00 0.00 2.29
498 499 2.478803 CCACCCACCCCCTCCTTTT 61.479 63.158 0.00 0.00 0.00 2.27
499 500 2.863988 CCACCCACCCCCTCCTTT 60.864 66.667 0.00 0.00 0.00 3.11
503 504 3.979497 CAACCCACCCACCCCCTC 61.979 72.222 0.00 0.00 0.00 4.30
504 505 4.875301 ACAACCCACCCACCCCCT 62.875 66.667 0.00 0.00 0.00 4.79
505 506 3.398365 AAACAACCCACCCACCCCC 62.398 63.158 0.00 0.00 0.00 5.40
506 507 1.835267 GAAACAACCCACCCACCCC 60.835 63.158 0.00 0.00 0.00 4.95
507 508 1.075896 TGAAACAACCCACCCACCC 60.076 57.895 0.00 0.00 0.00 4.61
508 509 0.106419 TCTGAAACAACCCACCCACC 60.106 55.000 0.00 0.00 0.00 4.61
509 510 1.770294 TTCTGAAACAACCCACCCAC 58.230 50.000 0.00 0.00 0.00 4.61
510 511 2.534042 TTTCTGAAACAACCCACCCA 57.466 45.000 0.00 0.00 0.00 4.51
511 512 2.299013 GGATTTCTGAAACAACCCACCC 59.701 50.000 4.73 0.00 0.00 4.61
512 513 2.030274 CGGATTTCTGAAACAACCCACC 60.030 50.000 4.73 0.97 0.00 4.61
513 514 2.882137 TCGGATTTCTGAAACAACCCAC 59.118 45.455 4.73 0.00 0.00 4.61
514 515 2.882137 GTCGGATTTCTGAAACAACCCA 59.118 45.455 4.73 0.00 32.23 4.51
515 516 2.228103 GGTCGGATTTCTGAAACAACCC 59.772 50.000 4.73 4.20 32.23 4.11
516 517 2.882137 TGGTCGGATTTCTGAAACAACC 59.118 45.455 4.73 10.58 32.23 3.77
517 518 4.669197 CGATGGTCGGATTTCTGAAACAAC 60.669 45.833 4.73 1.90 36.00 3.32
518 519 3.435327 CGATGGTCGGATTTCTGAAACAA 59.565 43.478 4.73 0.00 36.00 2.83
519 520 3.000041 CGATGGTCGGATTTCTGAAACA 59.000 45.455 4.73 0.00 36.00 2.83
520 521 3.658351 CGATGGTCGGATTTCTGAAAC 57.342 47.619 4.73 0.10 36.00 2.78
532 533 1.153823 GTCAGGTGTCCGATGGTCG 60.154 63.158 0.00 0.00 40.07 4.79
533 534 1.153823 CGTCAGGTGTCCGATGGTC 60.154 63.158 0.00 0.00 0.00 4.02
534 535 2.970639 CGTCAGGTGTCCGATGGT 59.029 61.111 0.00 0.00 0.00 3.55
535 536 2.509336 GCGTCAGGTGTCCGATGG 60.509 66.667 0.00 0.00 0.00 3.51
536 537 2.509336 GGCGTCAGGTGTCCGATG 60.509 66.667 0.00 0.00 0.00 3.84
537 538 2.680352 AGGCGTCAGGTGTCCGAT 60.680 61.111 0.00 0.00 0.00 4.18
538 539 3.371063 GAGGCGTCAGGTGTCCGA 61.371 66.667 0.52 0.00 0.00 4.55
539 540 4.778415 CGAGGCGTCAGGTGTCCG 62.778 72.222 7.26 0.00 0.00 4.79
540 541 2.615262 GATCGAGGCGTCAGGTGTCC 62.615 65.000 7.26 0.00 0.00 4.02
541 542 1.226717 GATCGAGGCGTCAGGTGTC 60.227 63.158 7.26 0.00 0.00 3.67
542 543 1.679305 AGATCGAGGCGTCAGGTGT 60.679 57.895 7.26 0.00 0.00 4.16
543 544 1.226802 CAGATCGAGGCGTCAGGTG 60.227 63.158 7.26 0.00 0.00 4.00
544 545 2.418910 CCAGATCGAGGCGTCAGGT 61.419 63.158 7.26 0.00 0.00 4.00
545 546 1.459455 ATCCAGATCGAGGCGTCAGG 61.459 60.000 7.26 0.45 0.00 3.86
546 547 0.039617 GATCCAGATCGAGGCGTCAG 60.040 60.000 7.26 0.00 0.00 3.51
547 548 1.456196 GGATCCAGATCGAGGCGTCA 61.456 60.000 6.95 0.00 38.69 4.35
548 549 1.287503 GGATCCAGATCGAGGCGTC 59.712 63.158 6.95 0.00 38.69 5.19
549 550 2.556459 CGGATCCAGATCGAGGCGT 61.556 63.158 13.41 0.00 38.69 5.68
550 551 2.256764 CGGATCCAGATCGAGGCG 59.743 66.667 13.41 0.00 38.69 5.52
551 552 1.287503 GTCGGATCCAGATCGAGGC 59.712 63.158 13.41 0.00 38.69 4.70
552 553 1.576920 CGTCGGATCCAGATCGAGG 59.423 63.158 13.41 4.66 38.69 4.63
553 554 1.576920 CCGTCGGATCCAGATCGAG 59.423 63.158 13.41 7.31 38.69 4.04
554 555 2.552819 GCCGTCGGATCCAGATCGA 61.553 63.158 17.49 0.00 38.69 3.59
555 556 2.049985 GCCGTCGGATCCAGATCG 60.050 66.667 17.49 14.38 38.69 3.69
556 557 1.287503 GAGCCGTCGGATCCAGATC 59.712 63.158 18.86 1.51 31.04 2.75
557 558 3.449349 GAGCCGTCGGATCCAGAT 58.551 61.111 18.86 0.00 31.04 2.90
577 578 4.735132 TACAGAGCACACGCCCGC 62.735 66.667 0.00 0.00 39.83 6.13
578 579 2.048597 TTACAGAGCACACGCCCG 60.049 61.111 0.00 0.00 39.83 6.13
579 580 1.014564 GTCTTACAGAGCACACGCCC 61.015 60.000 0.00 0.00 39.83 6.13
580 581 0.319555 TGTCTTACAGAGCACACGCC 60.320 55.000 0.00 0.00 39.83 5.68
581 582 1.497991 TTGTCTTACAGAGCACACGC 58.502 50.000 0.00 0.00 38.99 5.34
582 583 4.733850 TCTATTGTCTTACAGAGCACACG 58.266 43.478 0.00 0.00 0.00 4.49
588 589 3.797184 GCGGGCTCTATTGTCTTACAGAG 60.797 52.174 0.00 0.00 38.04 3.35
589 590 2.100916 GCGGGCTCTATTGTCTTACAGA 59.899 50.000 0.00 0.00 0.00 3.41
590 591 2.474816 GCGGGCTCTATTGTCTTACAG 58.525 52.381 0.00 0.00 0.00 2.74
591 592 1.202371 CGCGGGCTCTATTGTCTTACA 60.202 52.381 0.00 0.00 0.00 2.41
592 593 1.066605 TCGCGGGCTCTATTGTCTTAC 59.933 52.381 6.13 0.00 0.00 2.34
593 594 1.066605 GTCGCGGGCTCTATTGTCTTA 59.933 52.381 6.13 0.00 0.00 2.10
594 595 0.179108 GTCGCGGGCTCTATTGTCTT 60.179 55.000 6.13 0.00 0.00 3.01
595 596 1.437986 GTCGCGGGCTCTATTGTCT 59.562 57.895 6.13 0.00 0.00 3.41
596 597 1.591863 GGTCGCGGGCTCTATTGTC 60.592 63.158 6.13 0.00 0.00 3.18
597 598 2.355986 TGGTCGCGGGCTCTATTGT 61.356 57.895 6.13 0.00 0.00 2.71
598 599 1.883084 GTGGTCGCGGGCTCTATTG 60.883 63.158 6.13 0.00 0.00 1.90
599 600 1.614241 AAGTGGTCGCGGGCTCTATT 61.614 55.000 6.13 0.00 0.00 1.73
600 601 1.614241 AAAGTGGTCGCGGGCTCTAT 61.614 55.000 6.13 0.00 0.00 1.98
601 602 1.823169 AAAAGTGGTCGCGGGCTCTA 61.823 55.000 6.13 0.00 0.00 2.43
602 603 2.676163 AAAAAGTGGTCGCGGGCTCT 62.676 55.000 6.13 0.00 0.00 4.09
603 604 0.952010 TAAAAAGTGGTCGCGGGCTC 60.952 55.000 6.13 0.00 0.00 4.70
604 605 0.535553 TTAAAAAGTGGTCGCGGGCT 60.536 50.000 6.13 0.00 0.00 5.19
605 606 0.109919 CTTAAAAAGTGGTCGCGGGC 60.110 55.000 6.13 0.00 0.00 6.13
606 607 1.232119 ACTTAAAAAGTGGTCGCGGG 58.768 50.000 6.13 0.00 41.01 6.13
607 608 3.343380 AAACTTAAAAAGTGGTCGCGG 57.657 42.857 6.13 0.00 41.91 6.46
608 609 4.907582 CCTAAAACTTAAAAAGTGGTCGCG 59.092 41.667 0.00 0.00 41.91 5.87
609 610 5.217393 CCCTAAAACTTAAAAAGTGGTCGC 58.783 41.667 0.00 0.00 41.91 5.19
610 611 6.038492 TCACCCTAAAACTTAAAAAGTGGTCG 59.962 38.462 0.00 0.00 41.91 4.79
611 612 7.337480 TCACCCTAAAACTTAAAAAGTGGTC 57.663 36.000 0.00 0.00 41.91 4.02
612 613 7.721409 TTCACCCTAAAACTTAAAAAGTGGT 57.279 32.000 0.00 0.00 41.91 4.16
613 614 9.438228 TTTTTCACCCTAAAACTTAAAAAGTGG 57.562 29.630 0.00 0.00 41.91 4.00
641 642 2.820197 GTTCGGGATCTGAAGCCTTTTT 59.180 45.455 0.00 0.00 0.00 1.94
642 643 2.224769 TGTTCGGGATCTGAAGCCTTTT 60.225 45.455 0.00 0.00 0.00 2.27
643 644 1.351017 TGTTCGGGATCTGAAGCCTTT 59.649 47.619 0.00 0.00 0.00 3.11
644 645 0.984230 TGTTCGGGATCTGAAGCCTT 59.016 50.000 0.00 0.00 0.00 4.35
647 648 1.424493 CGCTGTTCGGGATCTGAAGC 61.424 60.000 0.00 0.00 33.78 3.86
659 661 1.880601 CTGCAGACACGACGCTGTTC 61.881 60.000 8.42 0.00 34.66 3.18
766 1925 1.062685 CGAGGATCCACAGTCGACG 59.937 63.158 15.82 7.86 34.28 5.12
785 1945 2.740452 GAGTCGAAATTACGCCCTAGG 58.260 52.381 0.06 0.06 0.00 3.02
904 3633 2.031768 GCAGGGGATCGATGGAGC 59.968 66.667 0.54 0.00 0.00 4.70
925 3654 4.162690 GTGGAGGCGAGGGCGATT 62.163 66.667 0.00 0.00 41.24 3.34
1193 3955 1.488527 GTACTTGATGGCGACGATCC 58.511 55.000 0.00 0.00 0.00 3.36
1762 4573 5.104444 AGAGCTGGATGATCTCATTGTCTTT 60.104 40.000 0.00 0.00 36.60 2.52
1763 4586 4.409574 AGAGCTGGATGATCTCATTGTCTT 59.590 41.667 0.00 0.00 36.60 3.01
2074 5086 1.502190 GCGCCTTCTTTTTCGGGAG 59.498 57.895 0.00 0.00 0.00 4.30
2125 5137 8.785329 AGTGGAATTTTGAGTAGATTCTTCTC 57.215 34.615 12.09 12.09 33.17 2.87
2365 5456 9.495572 TCAACACTACATCACAATTTACACATA 57.504 29.630 0.00 0.00 0.00 2.29
2434 5529 8.239314 ACACAAATTGAGCACTATAACTTGATG 58.761 33.333 0.00 0.00 0.00 3.07
2437 5532 6.803320 CCACACAAATTGAGCACTATAACTTG 59.197 38.462 0.00 0.00 0.00 3.16
2438 5533 6.490040 ACCACACAAATTGAGCACTATAACTT 59.510 34.615 0.00 0.00 0.00 2.66
2523 5623 3.354948 TCATCCACCACTCAGGATTTG 57.645 47.619 0.00 0.00 41.80 2.32
2529 5629 3.630769 CCATCAATTCATCCACCACTCAG 59.369 47.826 0.00 0.00 0.00 3.35
2530 5630 3.010472 ACCATCAATTCATCCACCACTCA 59.990 43.478 0.00 0.00 0.00 3.41
2536 5636 7.492344 GGACATTTTAACCATCAATTCATCCAC 59.508 37.037 0.00 0.00 0.00 4.02
2597 5697 5.878116 TGCTGTACTGGTACCATTATTCAAC 59.122 40.000 16.75 5.12 35.26 3.18
2600 5700 7.417612 CAATTGCTGTACTGGTACCATTATTC 58.582 38.462 16.75 4.07 35.26 1.75
2612 5712 4.275689 TGAACAAGTCCAATTGCTGTACTG 59.724 41.667 0.00 0.00 33.28 2.74
2644 5744 6.143278 GTGGAATTTCGAAAAACACATACACC 59.857 38.462 25.18 13.83 0.00 4.16
2657 5757 4.904253 AAAAAGACGGTGGAATTTCGAA 57.096 36.364 0.00 0.00 0.00 3.71
2658 5758 6.375377 CATTAAAAAGACGGTGGAATTTCGA 58.625 36.000 0.00 0.00 0.00 3.71
2659 5759 5.060446 GCATTAAAAAGACGGTGGAATTTCG 59.940 40.000 0.00 0.00 0.00 3.46
2660 5760 5.923684 TGCATTAAAAAGACGGTGGAATTTC 59.076 36.000 0.00 0.00 0.00 2.17
2661 5761 5.848406 TGCATTAAAAAGACGGTGGAATTT 58.152 33.333 0.00 0.00 0.00 1.82
2662 5762 5.461032 TGCATTAAAAAGACGGTGGAATT 57.539 34.783 0.00 0.00 0.00 2.17
2663 5763 5.461032 TTGCATTAAAAAGACGGTGGAAT 57.539 34.783 0.00 0.00 0.00 3.01
2711 7483 9.537192 CGGTGGTTATATTTCACAGTATAGAAA 57.463 33.333 0.00 0.00 38.04 2.52
2712 7484 8.698210 ACGGTGGTTATATTTCACAGTATAGAA 58.302 33.333 0.00 0.00 37.86 2.10
2713 7485 8.241497 ACGGTGGTTATATTTCACAGTATAGA 57.759 34.615 0.00 0.00 37.86 1.98
2714 7486 8.882415 AACGGTGGTTATATTTCACAGTATAG 57.118 34.615 0.00 0.00 38.47 1.31
2715 7487 7.648908 CGAACGGTGGTTATATTTCACAGTATA 59.351 37.037 0.00 0.00 38.47 1.47
2716 7488 6.477688 CGAACGGTGGTTATATTTCACAGTAT 59.522 38.462 0.00 0.00 38.47 2.12
2717 7489 5.806502 CGAACGGTGGTTATATTTCACAGTA 59.193 40.000 0.00 0.00 38.47 2.74
2718 7490 4.628333 CGAACGGTGGTTATATTTCACAGT 59.372 41.667 0.00 0.00 40.42 3.55
2719 7491 4.033587 CCGAACGGTGGTTATATTTCACAG 59.966 45.833 4.99 0.00 36.24 3.66
2720 7492 3.933955 CCGAACGGTGGTTATATTTCACA 59.066 43.478 4.99 0.00 36.24 3.58
2721 7493 4.183101 TCCGAACGGTGGTTATATTTCAC 58.817 43.478 12.93 0.00 36.24 3.18
2722 7494 4.468765 TCCGAACGGTGGTTATATTTCA 57.531 40.909 12.93 0.00 36.24 2.69
2723 7495 5.799681 TTTCCGAACGGTGGTTATATTTC 57.200 39.130 12.93 0.00 36.24 2.17
2724 7496 7.553760 ACTTATTTCCGAACGGTGGTTATATTT 59.446 33.333 12.93 0.00 36.24 1.40
2725 7497 7.049754 ACTTATTTCCGAACGGTGGTTATATT 58.950 34.615 12.93 0.00 36.24 1.28
2726 7498 6.585416 ACTTATTTCCGAACGGTGGTTATAT 58.415 36.000 12.93 0.00 36.24 0.86
2727 7499 5.976458 ACTTATTTCCGAACGGTGGTTATA 58.024 37.500 12.93 3.26 36.24 0.98
2734 7506 2.094545 ACGCTACTTATTTCCGAACGGT 60.095 45.455 12.93 0.00 36.47 4.83
2765 7537 9.010029 AGTGGTGTGGTTTAGTTCAAATATTAG 57.990 33.333 0.00 0.00 0.00 1.73
3116 7888 6.263168 CCAACAAGTACAACCTCTGAAGAAAT 59.737 38.462 0.00 0.00 0.00 2.17
3118 7890 5.104693 TCCAACAAGTACAACCTCTGAAGAA 60.105 40.000 0.00 0.00 0.00 2.52
3120 7892 4.703897 TCCAACAAGTACAACCTCTGAAG 58.296 43.478 0.00 0.00 0.00 3.02
3122 7894 4.593206 AGATCCAACAAGTACAACCTCTGA 59.407 41.667 0.00 0.00 0.00 3.27
3124 7896 5.552178 GAAGATCCAACAAGTACAACCTCT 58.448 41.667 0.00 0.00 0.00 3.69
3129 7901 4.748102 GTGTCGAAGATCCAACAAGTACAA 59.252 41.667 0.00 0.00 40.67 2.41
3130 7902 4.202172 TGTGTCGAAGATCCAACAAGTACA 60.202 41.667 0.00 0.00 40.67 2.90
3136 7908 3.676291 TGATGTGTCGAAGATCCAACA 57.324 42.857 0.00 0.00 40.67 3.33
3139 7911 3.996363 CAGTTTGATGTGTCGAAGATCCA 59.004 43.478 0.00 0.00 40.67 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.