Multiple sequence alignment - TraesCS4B01G257200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G257200 chr4B 100.000 3371 0 0 1 3371 522502570 522505940 0.000000e+00 6226.0
1 TraesCS4B01G257200 chr4D 92.140 2710 111 33 44 2686 426843381 426846055 0.000000e+00 3731.0
2 TraesCS4B01G257200 chr4D 95.161 62 3 0 2382 2443 426845695 426845756 7.700000e-17 99.0
3 TraesCS4B01G257200 chr4D 100.000 32 0 0 3340 3371 426848391 426848422 3.630000e-05 60.2
4 TraesCS4B01G257200 chr4A 92.224 1466 60 22 681 2104 38719590 38718137 0.000000e+00 2026.0
5 TraesCS4B01G257200 chr4A 89.242 660 36 11 14 648 38720238 38719589 0.000000e+00 793.0
6 TraesCS4B01G257200 chr4A 87.162 296 21 10 2391 2686 38717830 38717552 1.510000e-83 320.0
7 TraesCS4B01G257200 chr4A 99.123 114 1 0 2268 2381 38717891 38717778 4.410000e-49 206.0
8 TraesCS4B01G257200 chr4A 91.837 98 7 1 2104 2200 38718104 38718007 5.870000e-28 135.0
9 TraesCS4B01G257200 chrUn 99.535 215 1 0 2997 3211 189427658 189427444 3.150000e-105 392.0
10 TraesCS4B01G257200 chrUn 99.535 215 1 0 2997 3211 222873798 222874012 3.150000e-105 392.0
11 TraesCS4B01G257200 chrUn 99.535 215 1 0 2997 3211 450986398 450986612 3.150000e-105 392.0
12 TraesCS4B01G257200 chrUn 99.070 215 2 0 2997 3211 182444148 182444362 1.470000e-103 387.0
13 TraesCS4B01G257200 chrUn 99.070 215 2 0 2997 3211 439713692 439713906 1.470000e-103 387.0
14 TraesCS4B01G257200 chrUn 87.313 134 16 1 2768 2900 80232428 80232295 5.830000e-33 152.0
15 TraesCS4B01G257200 chr5B 99.535 215 1 0 2997 3211 130582075 130581861 3.150000e-105 392.0
16 TraesCS4B01G257200 chr5B 87.234 141 17 1 2762 2902 103481168 103481029 3.480000e-35 159.0
17 TraesCS4B01G257200 chr6A 99.074 216 2 0 2996 3211 9636615 9636830 4.080000e-104 388.0
18 TraesCS4B01G257200 chr7B 99.070 215 2 0 2997 3211 716905675 716905889 1.470000e-103 387.0
19 TraesCS4B01G257200 chr2B 99.070 215 2 0 2997 3211 173003891 173003677 1.470000e-103 387.0
20 TraesCS4B01G257200 chr2B 85.714 133 18 1 2770 2902 575872315 575872184 4.540000e-29 139.0
21 TraesCS4B01G257200 chr7A 87.234 141 17 1 2762 2902 26675706 26675567 3.480000e-35 159.0
22 TraesCS4B01G257200 chr5D 86.667 135 18 0 2765 2899 433340899 433340765 2.100000e-32 150.0
23 TraesCS4B01G257200 chr5D 85.385 130 19 0 2768 2897 192080639 192080510 5.870000e-28 135.0
24 TraesCS4B01G257200 chr1D 85.315 143 18 3 2765 2905 7094875 7094734 9.750000e-31 145.0
25 TraesCS4B01G257200 chr7D 84.615 143 19 3 2765 2905 366728843 366728984 4.540000e-29 139.0
26 TraesCS4B01G257200 chr3D 85.075 134 20 0 2766 2899 582131280 582131147 1.630000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G257200 chr4B 522502570 522505940 3370 False 6226.000000 6226 100.0000 1 3371 1 chr4B.!!$F1 3370
1 TraesCS4B01G257200 chr4D 426843381 426848422 5041 False 1296.733333 3731 95.7670 44 3371 3 chr4D.!!$F1 3327
2 TraesCS4B01G257200 chr4A 38717552 38720238 2686 True 696.000000 2026 91.9176 14 2686 5 chr4A.!!$R1 2672

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
648 676 0.963225 TTCAATGGTCTCACGGACGA 59.037 50.0 0.0 0.0 45.35 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2399 2636 0.030101 GAGCGATCTTGAGGTCGAGG 59.97 60.0 17.16 0.0 40.11 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 2.291282 TGAACCAGTGGTCCAAAGTTGT 60.291 45.455 17.06 0.00 33.12 3.32
104 105 7.772292 ACAGTGAACAGATAATGCATAGACATT 59.228 33.333 0.00 0.00 42.73 2.71
116 117 5.414360 TGCATAGACATTGAACAGAGAGAC 58.586 41.667 0.00 0.00 0.00 3.36
117 118 5.186603 TGCATAGACATTGAACAGAGAGACT 59.813 40.000 0.00 0.00 0.00 3.24
118 119 6.378280 TGCATAGACATTGAACAGAGAGACTA 59.622 38.462 0.00 0.00 0.00 2.59
119 120 6.917477 GCATAGACATTGAACAGAGAGACTAG 59.083 42.308 0.00 0.00 0.00 2.57
137 138 3.386726 ACTAGCTACCAGACAAACACACA 59.613 43.478 0.00 0.00 0.00 3.72
164 165 4.853924 AACCACACTAATCCAAAGCTTG 57.146 40.909 0.00 0.00 0.00 4.01
171 172 5.711976 ACACTAATCCAAAGCTTGCACTAAT 59.288 36.000 0.00 0.00 0.00 1.73
198 199 5.681105 CGAACTGCCGACCAAATTATTTATG 59.319 40.000 0.00 0.00 0.00 1.90
204 205 8.226819 TGCCGACCAAATTATTTATGTATTCA 57.773 30.769 0.00 0.00 0.00 2.57
235 236 6.239458 CCCTCCAATTTTAGCCAACAAACTAA 60.239 38.462 0.00 0.00 0.00 2.24
269 273 9.537848 CATCAAAGAAGAAAATAAAATGCAAGC 57.462 29.630 0.00 0.00 0.00 4.01
277 281 5.488262 AAATAAAATGCAAGCCCTGAACT 57.512 34.783 0.00 0.00 0.00 3.01
458 476 1.871039 ACCATCCGTGTTTCTCGTTTG 59.129 47.619 0.00 0.00 0.00 2.93
469 488 4.277239 TCGTTTGGCCGAGTGATG 57.723 55.556 0.00 0.00 32.18 3.07
492 511 3.334691 GTCATCCGGTTCAAATCACTCA 58.665 45.455 0.00 0.00 0.00 3.41
581 609 6.620877 ACTCCCGCCATTATTCTTATGATA 57.379 37.500 0.00 0.00 0.00 2.15
600 628 2.653234 AATCATCATCCTGCACTCCC 57.347 50.000 0.00 0.00 0.00 4.30
648 676 0.963225 TTCAATGGTCTCACGGACGA 59.037 50.000 0.00 0.00 45.35 4.20
650 678 1.135112 TCAATGGTCTCACGGACGATG 60.135 52.381 0.00 0.00 45.35 3.84
820 848 1.800805 CGCAATGGTCAGACTTGTCT 58.199 50.000 0.00 0.00 0.00 3.41
857 885 1.539827 GTTTGTGAACCCCCAAGATCG 59.460 52.381 0.00 0.00 0.00 3.69
872 906 2.292794 GATCGCGAGTAGCCCCACAA 62.293 60.000 16.66 0.00 44.76 3.33
904 938 3.739300 GGTATAAATATCTGCACACGCGT 59.261 43.478 5.58 5.58 42.97 6.01
1119 1177 2.178890 CGAGCAGAAGCAGCATCCC 61.179 63.158 0.00 0.00 45.49 3.85
1176 1234 2.435693 GGAGGCTGCCGACCAGTAT 61.436 63.158 25.02 3.06 43.71 2.12
1191 1249 1.593479 GTATTACACCTCGGCGCCC 60.593 63.158 23.46 2.84 0.00 6.13
1356 1414 2.028020 GGTCGATCTGAACCTCCAGTTT 60.028 50.000 0.00 0.00 39.40 2.66
1537 1616 5.013495 ACATAATATGTCACAGGATCAGGGG 59.987 44.000 0.00 0.00 39.92 4.79
1659 1739 0.254178 GCCAGGAAGAGAGCAATGGA 59.746 55.000 0.00 0.00 0.00 3.41
1782 1862 4.081030 TCGTCGTCGCGAGGTGAC 62.081 66.667 26.11 22.88 41.54 3.67
1784 1864 4.034258 GTCGTCGCGAGGTGACCA 62.034 66.667 26.11 5.89 39.58 4.02
1785 1865 4.034258 TCGTCGCGAGGTGACCAC 62.034 66.667 26.11 4.47 39.58 4.16
1864 1950 0.745468 CCTCTACGCCAGGGTAAGTC 59.255 60.000 0.00 0.00 0.00 3.01
1865 1951 0.381089 CTCTACGCCAGGGTAAGTCG 59.619 60.000 0.00 0.00 0.00 4.18
1911 1998 0.451135 GCACAACGTCGTGATGAAGC 60.451 55.000 11.62 7.96 39.34 3.86
1995 2082 1.174712 GGCTGAAGGTGCTGCAGAAA 61.175 55.000 20.43 0.69 39.42 2.52
2060 2148 2.035449 TCATTCGAACACGACTGGAACT 59.965 45.455 0.00 0.00 37.33 3.01
2166 2287 2.275134 TCAAGTTCATGCAGCTCCAA 57.725 45.000 0.00 0.00 0.00 3.53
2219 2341 6.994496 ACATATGTCATTGATCATCGGAAACT 59.006 34.615 1.41 0.00 0.00 2.66
2247 2422 7.090173 CCCAGTGTTTTGAACAACTATATTGG 58.910 38.462 0.00 0.00 44.16 3.16
2249 2424 7.594758 CCAGTGTTTTGAACAACTATATTGGTG 59.405 37.037 0.29 0.29 44.16 4.17
2263 2438 3.090765 GGTGCTGACCATTCCCCT 58.909 61.111 0.00 0.00 42.59 4.79
2265 2440 0.681243 GGTGCTGACCATTCCCCTTC 60.681 60.000 0.00 0.00 42.59 3.46
2266 2441 0.681243 GTGCTGACCATTCCCCTTCC 60.681 60.000 0.00 0.00 0.00 3.46
2381 2618 0.663688 CAGCAATGATCAGCTCTGGC 59.336 55.000 6.49 0.00 39.50 4.85
2382 2619 0.255033 AGCAATGATCAGCTCTGGCA 59.745 50.000 0.09 0.00 41.70 4.92
2383 2620 0.381089 GCAATGATCAGCTCTGGCAC 59.619 55.000 0.09 0.00 41.70 5.01
2384 2621 1.022735 CAATGATCAGCTCTGGCACC 58.977 55.000 0.09 0.00 41.70 5.01
2385 2622 0.463295 AATGATCAGCTCTGGCACCG 60.463 55.000 0.09 0.00 41.70 4.94
2386 2623 2.202987 GATCAGCTCTGGCACCGG 60.203 66.667 0.00 0.00 41.70 5.28
2387 2624 3.746949 GATCAGCTCTGGCACCGGG 62.747 68.421 6.32 0.00 41.70 5.73
2389 2626 3.390521 CAGCTCTGGCACCGGGTA 61.391 66.667 6.32 0.00 41.70 3.69
2390 2627 3.391382 AGCTCTGGCACCGGGTAC 61.391 66.667 6.32 0.00 41.70 3.34
2391 2628 3.702048 GCTCTGGCACCGGGTACA 61.702 66.667 6.32 1.04 38.54 2.90
2392 2629 3.065306 CTCTGGCACCGGGTACAA 58.935 61.111 6.32 0.00 0.00 2.41
2393 2630 1.375523 CTCTGGCACCGGGTACAAC 60.376 63.158 6.32 0.00 0.00 3.32
2394 2631 2.740826 CTGGCACCGGGTACAACG 60.741 66.667 6.32 0.00 0.00 4.10
2395 2632 3.524648 CTGGCACCGGGTACAACGT 62.525 63.158 6.32 0.00 0.00 3.99
2396 2633 2.739671 GGCACCGGGTACAACGTC 60.740 66.667 6.32 0.00 0.00 4.34
2397 2634 3.107661 GCACCGGGTACAACGTCG 61.108 66.667 6.32 0.00 0.00 5.12
2398 2635 2.431260 CACCGGGTACAACGTCGG 60.431 66.667 6.32 9.33 46.95 4.79
2399 2636 4.362476 ACCGGGTACAACGTCGGC 62.362 66.667 6.32 0.00 45.65 5.54
2401 2638 4.060038 CGGGTACAACGTCGGCCT 62.060 66.667 0.00 0.00 0.00 5.19
2402 2639 2.125793 GGGTACAACGTCGGCCTC 60.126 66.667 0.00 0.00 0.00 4.70
2403 2640 2.505557 GGTACAACGTCGGCCTCG 60.506 66.667 14.09 14.09 37.82 4.63
2404 2641 2.562912 GTACAACGTCGGCCTCGA 59.437 61.111 20.77 2.55 43.86 4.04
2412 2649 2.035155 TCGGCCTCGACCTCAAGA 59.965 61.111 0.00 0.00 40.88 3.02
2413 2650 1.379977 TCGGCCTCGACCTCAAGAT 60.380 57.895 0.00 0.00 40.88 2.40
2414 2651 1.066587 CGGCCTCGACCTCAAGATC 59.933 63.158 0.00 0.00 39.00 2.75
2415 2652 1.066587 GGCCTCGACCTCAAGATCG 59.933 63.158 0.00 0.00 39.72 3.69
2416 2653 1.590259 GCCTCGACCTCAAGATCGC 60.590 63.158 0.00 0.00 38.24 4.58
2417 2654 2.010582 GCCTCGACCTCAAGATCGCT 62.011 60.000 0.00 0.00 38.24 4.93
2418 2655 0.030101 CCTCGACCTCAAGATCGCTC 59.970 60.000 0.00 0.00 38.24 5.03
2419 2656 1.021202 CTCGACCTCAAGATCGCTCT 58.979 55.000 0.00 0.00 38.24 4.09
2420 2657 0.735471 TCGACCTCAAGATCGCTCTG 59.265 55.000 0.00 0.00 38.24 3.35
2421 2658 0.869454 CGACCTCAAGATCGCTCTGC 60.869 60.000 0.00 0.00 0.00 4.26
2422 2659 0.529555 GACCTCAAGATCGCTCTGCC 60.530 60.000 0.00 0.00 0.00 4.85
2423 2660 1.591059 CCTCAAGATCGCTCTGCCG 60.591 63.158 0.00 0.00 0.00 5.69
2424 2661 2.202797 TCAAGATCGCTCTGCCGC 60.203 61.111 0.00 0.00 0.00 6.53
2425 2662 2.510012 CAAGATCGCTCTGCCGCA 60.510 61.111 0.00 0.00 0.00 5.69
2426 2663 2.202851 AAGATCGCTCTGCCGCAG 60.203 61.111 14.62 14.62 0.00 5.18
2427 2664 4.887987 AGATCGCTCTGCCGCAGC 62.888 66.667 15.98 4.97 40.48 5.25
2437 2674 2.025727 GCCGCAGCAATGATCAGC 59.974 61.111 0.09 0.00 39.53 4.26
2438 2675 2.478890 GCCGCAGCAATGATCAGCT 61.479 57.895 0.09 2.14 42.94 4.24
2439 2676 1.647629 CCGCAGCAATGATCAGCTC 59.352 57.895 6.49 2.48 39.50 4.09
2440 2677 0.814410 CCGCAGCAATGATCAGCTCT 60.814 55.000 6.49 0.00 39.50 4.09
2441 2678 0.305009 CGCAGCAATGATCAGCTCTG 59.695 55.000 6.49 10.55 39.50 3.35
2442 2679 0.663688 GCAGCAATGATCAGCTCTGG 59.336 55.000 17.23 5.96 39.50 3.86
2464 2701 1.630244 CCAACGAGGCTCGAGCAAAG 61.630 60.000 40.35 26.82 43.74 2.77
2516 2753 2.850060 GCATTCGTGCACAATGATTCTG 59.150 45.455 29.81 14.98 33.69 3.02
2530 2767 9.552114 CACAATGATTCTGAAGTGTTTAGATTC 57.448 33.333 0.00 0.00 0.00 2.52
2635 2872 3.134804 CCACCCTAATTTGTCCTCGAGAT 59.865 47.826 15.71 0.00 0.00 2.75
2636 2873 4.122776 CACCCTAATTTGTCCTCGAGATG 58.877 47.826 15.71 0.00 0.00 2.90
2659 2896 1.874345 ATCCTGTTTCGACGGACGCT 61.874 55.000 0.00 0.00 42.26 5.07
2660 2897 2.372690 CCTGTTTCGACGGACGCTG 61.373 63.158 0.00 0.00 42.26 5.18
2672 2909 0.458025 GGACGCTGGTAGTTTCTCCG 60.458 60.000 0.00 0.00 0.00 4.63
2674 2911 0.677842 ACGCTGGTAGTTTCTCCGTT 59.322 50.000 0.00 0.00 0.00 4.44
2686 2923 4.814771 AGTTTCTCCGTTGTTTTCTCGATT 59.185 37.500 0.00 0.00 0.00 3.34
2687 2924 5.987347 AGTTTCTCCGTTGTTTTCTCGATTA 59.013 36.000 0.00 0.00 0.00 1.75
2688 2925 6.480981 AGTTTCTCCGTTGTTTTCTCGATTAA 59.519 34.615 0.00 0.00 0.00 1.40
2689 2926 7.172703 AGTTTCTCCGTTGTTTTCTCGATTAAT 59.827 33.333 0.00 0.00 0.00 1.40
2690 2927 8.437742 GTTTCTCCGTTGTTTTCTCGATTAATA 58.562 33.333 0.00 0.00 0.00 0.98
2691 2928 7.751047 TCTCCGTTGTTTTCTCGATTAATAG 57.249 36.000 0.00 0.00 0.00 1.73
2692 2929 6.255020 TCTCCGTTGTTTTCTCGATTAATAGC 59.745 38.462 0.00 0.00 0.00 2.97
2693 2930 5.292589 TCCGTTGTTTTCTCGATTAATAGCC 59.707 40.000 0.00 0.00 0.00 3.93
2694 2931 5.064198 CCGTTGTTTTCTCGATTAATAGCCA 59.936 40.000 0.00 0.00 0.00 4.75
2695 2932 6.402766 CCGTTGTTTTCTCGATTAATAGCCAA 60.403 38.462 0.00 0.00 0.00 4.52
2696 2933 7.186804 CGTTGTTTTCTCGATTAATAGCCAAT 58.813 34.615 0.00 0.00 0.00 3.16
2697 2934 7.164171 CGTTGTTTTCTCGATTAATAGCCAATG 59.836 37.037 0.00 0.00 0.00 2.82
2698 2935 7.026631 TGTTTTCTCGATTAATAGCCAATGG 57.973 36.000 0.00 0.00 0.00 3.16
2699 2936 6.826231 TGTTTTCTCGATTAATAGCCAATGGA 59.174 34.615 2.05 0.00 0.00 3.41
2700 2937 7.502226 TGTTTTCTCGATTAATAGCCAATGGAT 59.498 33.333 2.05 0.00 0.00 3.41
2701 2938 8.999431 GTTTTCTCGATTAATAGCCAATGGATA 58.001 33.333 2.05 0.00 0.00 2.59
2703 2940 6.878317 TCTCGATTAATAGCCAATGGATAGG 58.122 40.000 2.05 0.00 0.00 2.57
2704 2941 6.440647 TCTCGATTAATAGCCAATGGATAGGT 59.559 38.462 2.05 0.00 0.00 3.08
2705 2942 6.406370 TCGATTAATAGCCAATGGATAGGTG 58.594 40.000 2.05 0.00 0.00 4.00
2706 2943 6.013725 TCGATTAATAGCCAATGGATAGGTGT 60.014 38.462 2.05 0.00 0.00 4.16
2757 3033 5.010617 GGTCAGTCCTATCTCTCATCCTTTC 59.989 48.000 0.00 0.00 0.00 2.62
2759 3035 6.267471 GTCAGTCCTATCTCTCATCCTTTCAT 59.733 42.308 0.00 0.00 0.00 2.57
2761 3037 5.543405 AGTCCTATCTCTCATCCTTTCATGG 59.457 44.000 0.00 0.00 0.00 3.66
2762 3038 5.541868 GTCCTATCTCTCATCCTTTCATGGA 59.458 44.000 0.00 0.00 40.82 3.41
2763 3039 6.213195 GTCCTATCTCTCATCCTTTCATGGAT 59.787 42.308 0.00 0.00 46.91 3.41
2766 3042 8.600668 CCTATCTCTCATCCTTTCATGGATTTA 58.399 37.037 0.00 0.00 43.79 1.40
2768 3044 8.921353 ATCTCTCATCCTTTCATGGATTTAAG 57.079 34.615 0.00 0.00 43.79 1.85
2769 3045 7.285566 TCTCTCATCCTTTCATGGATTTAAGG 58.714 38.462 0.00 0.00 43.79 2.69
2770 3046 5.829924 TCTCATCCTTTCATGGATTTAAGGC 59.170 40.000 0.00 0.00 43.79 4.35
2771 3047 4.895297 TCATCCTTTCATGGATTTAAGGCC 59.105 41.667 0.00 0.00 43.79 5.19
2772 3048 3.642141 TCCTTTCATGGATTTAAGGCCC 58.358 45.455 0.00 0.00 37.62 5.80
2773 3049 3.272020 TCCTTTCATGGATTTAAGGCCCT 59.728 43.478 0.00 0.00 37.62 5.19
2774 3050 3.385755 CCTTTCATGGATTTAAGGCCCTG 59.614 47.826 0.00 0.00 31.59 4.45
2775 3051 3.756082 TTCATGGATTTAAGGCCCTGT 57.244 42.857 0.00 0.00 0.00 4.00
2776 3052 3.756082 TCATGGATTTAAGGCCCTGTT 57.244 42.857 0.00 0.00 0.00 3.16
2777 3053 3.631250 TCATGGATTTAAGGCCCTGTTC 58.369 45.455 0.00 0.00 0.00 3.18
2778 3054 3.011144 TCATGGATTTAAGGCCCTGTTCA 59.989 43.478 0.00 0.00 0.00 3.18
2779 3055 3.085952 TGGATTTAAGGCCCTGTTCAG 57.914 47.619 0.00 0.00 0.00 3.02
2780 3056 2.378547 TGGATTTAAGGCCCTGTTCAGT 59.621 45.455 0.00 0.00 0.00 3.41
2781 3057 3.181423 TGGATTTAAGGCCCTGTTCAGTT 60.181 43.478 0.00 0.00 0.00 3.16
2782 3058 4.043561 TGGATTTAAGGCCCTGTTCAGTTA 59.956 41.667 0.00 0.00 0.00 2.24
2783 3059 5.201243 GGATTTAAGGCCCTGTTCAGTTAT 58.799 41.667 0.00 0.00 0.00 1.89
2784 3060 5.299531 GGATTTAAGGCCCTGTTCAGTTATC 59.700 44.000 0.00 0.00 0.00 1.75
2785 3061 2.403252 AAGGCCCTGTTCAGTTATCG 57.597 50.000 0.00 0.00 0.00 2.92
2786 3062 0.107654 AGGCCCTGTTCAGTTATCGC 60.108 55.000 0.00 0.00 0.00 4.58
2787 3063 1.095807 GGCCCTGTTCAGTTATCGCC 61.096 60.000 0.00 0.00 0.00 5.54
2788 3064 1.095807 GCCCTGTTCAGTTATCGCCC 61.096 60.000 0.00 0.00 0.00 6.13
2789 3065 0.810031 CCCTGTTCAGTTATCGCCCG 60.810 60.000 0.00 0.00 0.00 6.13
2790 3066 1.429148 CCTGTTCAGTTATCGCCCGC 61.429 60.000 0.00 0.00 0.00 6.13
2791 3067 0.460284 CTGTTCAGTTATCGCCCGCT 60.460 55.000 0.00 0.00 0.00 5.52
2792 3068 0.459585 TGTTCAGTTATCGCCCGCTC 60.460 55.000 0.00 0.00 0.00 5.03
2793 3069 1.143183 TTCAGTTATCGCCCGCTCC 59.857 57.895 0.00 0.00 0.00 4.70
2794 3070 2.622903 TTCAGTTATCGCCCGCTCCG 62.623 60.000 0.00 0.00 0.00 4.63
2806 3082 3.849951 GCTCCGGGAATCTGCGGA 61.850 66.667 0.00 0.00 0.00 5.54
2807 3083 2.419198 CTCCGGGAATCTGCGGAG 59.581 66.667 0.00 0.00 38.06 4.63
2820 3096 4.697756 CGGAGCGGGGAAACAGCA 62.698 66.667 0.00 0.00 37.88 4.41
2821 3097 2.747855 GGAGCGGGGAAACAGCAG 60.748 66.667 0.00 0.00 37.88 4.24
2822 3098 3.435186 GAGCGGGGAAACAGCAGC 61.435 66.667 0.00 0.00 37.88 5.25
2823 3099 3.909086 GAGCGGGGAAACAGCAGCT 62.909 63.158 0.00 0.00 37.88 4.24
2824 3100 3.435186 GCGGGGAAACAGCAGCTC 61.435 66.667 0.00 0.00 35.87 4.09
2825 3101 2.747855 CGGGGAAACAGCAGCTCC 60.748 66.667 0.00 0.00 0.00 4.70
2826 3102 2.747855 GGGGAAACAGCAGCTCCG 60.748 66.667 0.00 0.00 0.00 4.63
2827 3103 3.435186 GGGAAACAGCAGCTCCGC 61.435 66.667 0.00 0.00 0.00 5.54
2828 3104 2.359230 GGAAACAGCAGCTCCGCT 60.359 61.111 0.00 0.00 45.21 5.52
2838 3114 3.403936 AGCTCCGCTGTTTTGAACT 57.596 47.368 0.00 0.00 37.57 3.01
2839 3115 0.947244 AGCTCCGCTGTTTTGAACTG 59.053 50.000 0.00 0.00 37.57 3.16
2847 3123 2.378806 CTGTTTTGAACTGCAGCTTCG 58.621 47.619 15.27 0.00 0.00 3.79
2848 3124 1.123655 GTTTTGAACTGCAGCTTCGC 58.876 50.000 15.27 0.00 0.00 4.70
2849 3125 0.030638 TTTTGAACTGCAGCTTCGCC 59.969 50.000 15.27 0.00 0.00 5.54
2850 3126 1.100463 TTTGAACTGCAGCTTCGCCA 61.100 50.000 15.27 0.00 0.00 5.69
2851 3127 1.100463 TTGAACTGCAGCTTCGCCAA 61.100 50.000 15.27 6.30 0.00 4.52
2852 3128 1.081840 GAACTGCAGCTTCGCCAAC 60.082 57.895 15.27 0.00 0.00 3.77
2853 3129 2.463675 GAACTGCAGCTTCGCCAACC 62.464 60.000 15.27 0.00 0.00 3.77
2854 3130 2.670934 CTGCAGCTTCGCCAACCT 60.671 61.111 0.00 0.00 0.00 3.50
2855 3131 2.669569 TGCAGCTTCGCCAACCTC 60.670 61.111 0.00 0.00 0.00 3.85
2856 3132 3.793144 GCAGCTTCGCCAACCTCG 61.793 66.667 0.00 0.00 0.00 4.63
2857 3133 3.793144 CAGCTTCGCCAACCTCGC 61.793 66.667 0.00 0.00 0.00 5.03
2858 3134 4.008933 AGCTTCGCCAACCTCGCT 62.009 61.111 0.00 0.00 0.00 4.93
2859 3135 3.491652 GCTTCGCCAACCTCGCTC 61.492 66.667 0.00 0.00 0.00 5.03
2860 3136 2.815647 CTTCGCCAACCTCGCTCC 60.816 66.667 0.00 0.00 0.00 4.70
2861 3137 4.388499 TTCGCCAACCTCGCTCCC 62.388 66.667 0.00 0.00 0.00 4.30
2865 3141 4.148825 CCAACCTCGCTCCCGGAG 62.149 72.222 10.41 10.41 34.56 4.63
2866 3142 3.382832 CAACCTCGCTCCCGGAGT 61.383 66.667 16.09 0.00 34.56 3.85
2867 3143 2.603776 AACCTCGCTCCCGGAGTT 60.604 61.111 16.09 0.00 34.56 3.01
2868 3144 2.943978 AACCTCGCTCCCGGAGTTG 61.944 63.158 16.09 9.12 31.89 3.16
2869 3145 3.382832 CCTCGCTCCCGGAGTTGT 61.383 66.667 16.09 0.00 34.56 3.32
2870 3146 2.125912 CTCGCTCCCGGAGTTGTG 60.126 66.667 16.09 6.43 34.56 3.33
2871 3147 3.649277 CTCGCTCCCGGAGTTGTGG 62.649 68.421 16.09 1.50 34.56 4.17
2872 3148 3.691342 CGCTCCCGGAGTTGTGGA 61.691 66.667 16.09 0.00 31.39 4.02
2873 3149 2.266055 GCTCCCGGAGTTGTGGAG 59.734 66.667 16.09 0.00 46.87 3.86
2874 3150 2.266055 CTCCCGGAGTTGTGGAGC 59.734 66.667 0.73 0.00 39.29 4.70
2875 3151 3.649277 CTCCCGGAGTTGTGGAGCG 62.649 68.421 0.73 0.00 39.29 5.03
2876 3152 4.760047 CCCGGAGTTGTGGAGCGG 62.760 72.222 0.73 0.00 0.00 5.52
2877 3153 3.691342 CCGGAGTTGTGGAGCGGA 61.691 66.667 0.00 0.00 0.00 5.54
2878 3154 2.125912 CGGAGTTGTGGAGCGGAG 60.126 66.667 0.00 0.00 0.00 4.63
2879 3155 2.932234 CGGAGTTGTGGAGCGGAGT 61.932 63.158 0.00 0.00 0.00 3.85
2880 3156 1.374758 GGAGTTGTGGAGCGGAGTG 60.375 63.158 0.00 0.00 0.00 3.51
2881 3157 1.374758 GAGTTGTGGAGCGGAGTGG 60.375 63.158 0.00 0.00 0.00 4.00
2882 3158 2.100879 GAGTTGTGGAGCGGAGTGGT 62.101 60.000 0.00 0.00 0.00 4.16
2883 3159 0.830444 AGTTGTGGAGCGGAGTGGTA 60.830 55.000 0.00 0.00 0.00 3.25
2884 3160 0.669625 GTTGTGGAGCGGAGTGGTAC 60.670 60.000 0.00 0.00 0.00 3.34
2885 3161 1.823169 TTGTGGAGCGGAGTGGTACC 61.823 60.000 4.43 4.43 0.00 3.34
2892 3168 4.565531 GGAGTGGTACCGAACACG 57.434 61.111 7.57 0.00 42.25 4.49
2914 3190 3.243535 GGCCTAAATTCCAACATAGCAGC 60.244 47.826 0.00 0.00 0.00 5.25
2922 3198 1.065199 CCAACATAGCAGCAGGGAAGA 60.065 52.381 0.00 0.00 0.00 2.87
2947 3223 4.374702 GCTGCTCACCGTTGTGCG 62.375 66.667 2.56 0.00 43.82 5.34
2951 3227 1.954146 GCTCACCGTTGTGCGAAGA 60.954 57.895 0.00 0.00 44.77 2.87
2952 3228 1.891060 GCTCACCGTTGTGCGAAGAG 61.891 60.000 0.00 0.00 44.77 2.85
2963 3239 0.323451 TGCGAAGAGAGCACCTCCTA 60.323 55.000 2.95 0.00 42.97 2.94
2974 3250 7.740805 AGAGAGCACCTCCTAAAATTATTAGG 58.259 38.462 15.07 15.07 42.97 2.69
2982 3258 8.225416 ACCTCCTAAAATTATTAGGTGATTCCC 58.775 37.037 19.28 0.00 41.69 3.97
2998 3274 6.127730 GGTGATTCCCTTATGTTGGTTGTAAG 60.128 42.308 0.00 0.00 0.00 2.34
2999 3275 6.657541 GTGATTCCCTTATGTTGGTTGTAAGA 59.342 38.462 0.00 0.00 0.00 2.10
3000 3276 6.657541 TGATTCCCTTATGTTGGTTGTAAGAC 59.342 38.462 0.00 0.00 0.00 3.01
3001 3277 4.571919 TCCCTTATGTTGGTTGTAAGACG 58.428 43.478 0.00 0.00 0.00 4.18
3002 3278 3.687698 CCCTTATGTTGGTTGTAAGACGG 59.312 47.826 0.00 0.00 0.00 4.79
3003 3279 3.126343 CCTTATGTTGGTTGTAAGACGGC 59.874 47.826 0.00 0.00 0.00 5.68
3004 3280 1.153353 ATGTTGGTTGTAAGACGGCG 58.847 50.000 4.80 4.80 0.00 6.46
3005 3281 1.205820 GTTGGTTGTAAGACGGCGC 59.794 57.895 6.90 0.00 0.00 6.53
3006 3282 1.070105 TTGGTTGTAAGACGGCGCT 59.930 52.632 6.90 1.65 0.00 5.92
3007 3283 0.947180 TTGGTTGTAAGACGGCGCTC 60.947 55.000 6.90 3.86 0.00 5.03
3008 3284 1.080025 GGTTGTAAGACGGCGCTCT 60.080 57.895 6.90 6.48 0.00 4.09
3009 3285 0.669625 GGTTGTAAGACGGCGCTCTT 60.670 55.000 21.81 21.81 34.72 2.85
3010 3286 0.714439 GTTGTAAGACGGCGCTCTTC 59.286 55.000 21.78 15.67 32.54 2.87
3011 3287 0.315886 TTGTAAGACGGCGCTCTTCA 59.684 50.000 21.78 17.30 32.54 3.02
3012 3288 0.530744 TGTAAGACGGCGCTCTTCAT 59.469 50.000 21.78 3.60 32.54 2.57
3013 3289 1.067142 TGTAAGACGGCGCTCTTCATT 60.067 47.619 21.78 7.13 32.54 2.57
3014 3290 1.324736 GTAAGACGGCGCTCTTCATTG 59.675 52.381 21.78 0.00 32.54 2.82
3015 3291 0.320771 AAGACGGCGCTCTTCATTGT 60.321 50.000 6.90 0.00 0.00 2.71
3016 3292 0.320771 AGACGGCGCTCTTCATTGTT 60.321 50.000 6.90 0.00 0.00 2.83
3017 3293 0.179215 GACGGCGCTCTTCATTGTTG 60.179 55.000 6.90 0.00 0.00 3.33
3018 3294 1.512734 CGGCGCTCTTCATTGTTGC 60.513 57.895 7.64 0.00 0.00 4.17
3019 3295 1.580942 GGCGCTCTTCATTGTTGCA 59.419 52.632 7.64 0.00 0.00 4.08
3020 3296 0.455633 GGCGCTCTTCATTGTTGCAG 60.456 55.000 7.64 0.00 0.00 4.41
3021 3297 1.069378 GCGCTCTTCATTGTTGCAGC 61.069 55.000 0.00 0.00 0.00 5.25
3022 3298 0.520404 CGCTCTTCATTGTTGCAGCT 59.480 50.000 1.17 0.00 0.00 4.24
3023 3299 1.728179 CGCTCTTCATTGTTGCAGCTG 60.728 52.381 10.11 10.11 0.00 4.24
3024 3300 1.402456 GCTCTTCATTGTTGCAGCTGG 60.402 52.381 17.12 0.00 0.00 4.85
3025 3301 2.156917 CTCTTCATTGTTGCAGCTGGA 58.843 47.619 17.12 10.66 0.00 3.86
3026 3302 2.753452 CTCTTCATTGTTGCAGCTGGAT 59.247 45.455 17.12 0.00 0.00 3.41
3027 3303 2.751259 TCTTCATTGTTGCAGCTGGATC 59.249 45.455 17.12 12.79 0.00 3.36
3028 3304 1.466856 TCATTGTTGCAGCTGGATCC 58.533 50.000 17.12 4.20 0.00 3.36
3029 3305 1.179152 CATTGTTGCAGCTGGATCCA 58.821 50.000 17.12 15.27 0.00 3.41
3030 3306 1.546923 CATTGTTGCAGCTGGATCCAA 59.453 47.619 17.00 18.02 0.00 3.53
3031 3307 1.927487 TTGTTGCAGCTGGATCCAAT 58.073 45.000 17.00 4.44 0.00 3.16
3032 3308 1.179152 TGTTGCAGCTGGATCCAATG 58.821 50.000 17.00 17.80 0.00 2.82
3033 3309 1.272037 TGTTGCAGCTGGATCCAATGA 60.272 47.619 24.30 10.94 0.00 2.57
3034 3310 1.133790 GTTGCAGCTGGATCCAATGAC 59.866 52.381 24.30 17.10 0.00 3.06
3035 3311 0.328926 TGCAGCTGGATCCAATGACA 59.671 50.000 24.30 18.84 0.00 3.58
3036 3312 1.064240 TGCAGCTGGATCCAATGACAT 60.064 47.619 24.30 3.18 0.00 3.06
3037 3313 2.173143 TGCAGCTGGATCCAATGACATA 59.827 45.455 24.30 9.00 0.00 2.29
3038 3314 3.181437 TGCAGCTGGATCCAATGACATAT 60.181 43.478 24.30 0.99 0.00 1.78
3039 3315 3.825014 GCAGCTGGATCCAATGACATATT 59.175 43.478 24.30 0.00 0.00 1.28
3040 3316 4.280174 GCAGCTGGATCCAATGACATATTT 59.720 41.667 24.30 0.00 0.00 1.40
3041 3317 5.221382 GCAGCTGGATCCAATGACATATTTT 60.221 40.000 24.30 0.00 0.00 1.82
3042 3318 6.213677 CAGCTGGATCCAATGACATATTTTG 58.786 40.000 17.00 0.00 0.00 2.44
3043 3319 5.303589 AGCTGGATCCAATGACATATTTTGG 59.696 40.000 17.00 0.00 41.04 3.28
3052 3328 9.699410 TCCAATGACATATTTTGGAGTATCTTT 57.301 29.630 4.45 0.00 42.96 2.52
3053 3329 9.956720 CCAATGACATATTTTGGAGTATCTTTC 57.043 33.333 0.00 0.00 42.02 2.62
3054 3330 9.655769 CAATGACATATTTTGGAGTATCTTTCG 57.344 33.333 0.00 0.00 33.73 3.46
3055 3331 7.246674 TGACATATTTTGGAGTATCTTTCGC 57.753 36.000 0.00 0.00 33.73 4.70
3056 3332 6.260050 TGACATATTTTGGAGTATCTTTCGCC 59.740 38.462 0.00 0.00 33.73 5.54
3057 3333 6.357367 ACATATTTTGGAGTATCTTTCGCCT 58.643 36.000 0.00 0.00 33.73 5.52
3058 3334 6.828785 ACATATTTTGGAGTATCTTTCGCCTT 59.171 34.615 0.00 0.00 33.73 4.35
3059 3335 5.819825 ATTTTGGAGTATCTTTCGCCTTC 57.180 39.130 0.00 0.00 33.73 3.46
3060 3336 3.973206 TTGGAGTATCTTTCGCCTTCA 57.027 42.857 0.00 0.00 33.73 3.02
3061 3337 3.526931 TGGAGTATCTTTCGCCTTCAG 57.473 47.619 0.00 0.00 33.73 3.02
3062 3338 2.832129 TGGAGTATCTTTCGCCTTCAGT 59.168 45.455 0.00 0.00 33.73 3.41
3063 3339 4.021229 TGGAGTATCTTTCGCCTTCAGTA 58.979 43.478 0.00 0.00 33.73 2.74
3064 3340 4.142227 TGGAGTATCTTTCGCCTTCAGTAC 60.142 45.833 0.00 0.00 33.73 2.73
3065 3341 4.361420 GAGTATCTTTCGCCTTCAGTACC 58.639 47.826 0.00 0.00 0.00 3.34
3066 3342 2.295253 ATCTTTCGCCTTCAGTACCG 57.705 50.000 0.00 0.00 0.00 4.02
3067 3343 0.963962 TCTTTCGCCTTCAGTACCGT 59.036 50.000 0.00 0.00 0.00 4.83
3068 3344 1.342174 TCTTTCGCCTTCAGTACCGTT 59.658 47.619 0.00 0.00 0.00 4.44
3069 3345 1.725164 CTTTCGCCTTCAGTACCGTTC 59.275 52.381 0.00 0.00 0.00 3.95
3070 3346 0.963962 TTCGCCTTCAGTACCGTTCT 59.036 50.000 0.00 0.00 0.00 3.01
3071 3347 0.963962 TCGCCTTCAGTACCGTTCTT 59.036 50.000 0.00 0.00 0.00 2.52
3072 3348 1.342174 TCGCCTTCAGTACCGTTCTTT 59.658 47.619 0.00 0.00 0.00 2.52
3073 3349 1.459592 CGCCTTCAGTACCGTTCTTTG 59.540 52.381 0.00 0.00 0.00 2.77
3074 3350 1.804748 GCCTTCAGTACCGTTCTTTGG 59.195 52.381 0.00 0.00 0.00 3.28
3075 3351 2.549349 GCCTTCAGTACCGTTCTTTGGA 60.549 50.000 0.00 0.00 0.00 3.53
3076 3352 3.064931 CCTTCAGTACCGTTCTTTGGAC 58.935 50.000 0.00 0.00 0.00 4.02
3077 3353 2.427232 TCAGTACCGTTCTTTGGACG 57.573 50.000 0.00 0.00 0.00 4.79
3078 3354 1.955778 TCAGTACCGTTCTTTGGACGA 59.044 47.619 0.00 0.00 0.00 4.20
3079 3355 2.030540 TCAGTACCGTTCTTTGGACGAG 60.031 50.000 0.00 0.00 0.00 4.18
3080 3356 2.030540 CAGTACCGTTCTTTGGACGAGA 60.031 50.000 0.00 0.00 0.00 4.04
3081 3357 2.228343 AGTACCGTTCTTTGGACGAGAG 59.772 50.000 0.00 0.00 0.00 3.20
3082 3358 1.325355 ACCGTTCTTTGGACGAGAGA 58.675 50.000 0.00 0.00 0.00 3.10
3083 3359 1.684983 ACCGTTCTTTGGACGAGAGAA 59.315 47.619 0.00 0.00 0.00 2.87
3084 3360 2.288273 ACCGTTCTTTGGACGAGAGAAG 60.288 50.000 0.00 0.00 30.66 2.85
3085 3361 1.721926 CGTTCTTTGGACGAGAGAAGC 59.278 52.381 0.00 0.00 30.66 3.86
3086 3362 2.070028 GTTCTTTGGACGAGAGAAGCC 58.930 52.381 0.00 0.00 30.66 4.35
3087 3363 1.633774 TCTTTGGACGAGAGAAGCCT 58.366 50.000 0.00 0.00 0.00 4.58
3088 3364 1.971357 TCTTTGGACGAGAGAAGCCTT 59.029 47.619 0.00 0.00 0.00 4.35
3089 3365 3.162666 TCTTTGGACGAGAGAAGCCTTA 58.837 45.455 0.00 0.00 0.00 2.69
3090 3366 3.769844 TCTTTGGACGAGAGAAGCCTTAT 59.230 43.478 0.00 0.00 0.00 1.73
3091 3367 3.802948 TTGGACGAGAGAAGCCTTATC 57.197 47.619 0.00 0.00 0.00 1.75
3092 3368 2.032620 TGGACGAGAGAAGCCTTATCC 58.967 52.381 0.00 0.00 0.00 2.59
3093 3369 2.312390 GGACGAGAGAAGCCTTATCCT 58.688 52.381 0.00 0.00 0.00 3.24
3094 3370 2.696187 GGACGAGAGAAGCCTTATCCTT 59.304 50.000 0.00 0.00 0.00 3.36
3095 3371 3.243602 GGACGAGAGAAGCCTTATCCTTC 60.244 52.174 0.00 0.00 39.13 3.46
3096 3372 3.366396 ACGAGAGAAGCCTTATCCTTCA 58.634 45.455 0.00 0.00 40.83 3.02
3097 3373 3.383185 ACGAGAGAAGCCTTATCCTTCAG 59.617 47.826 0.00 0.00 40.83 3.02
3098 3374 3.634448 CGAGAGAAGCCTTATCCTTCAGA 59.366 47.826 0.00 0.00 40.83 3.27
3099 3375 4.499019 CGAGAGAAGCCTTATCCTTCAGAC 60.499 50.000 0.00 0.00 40.83 3.51
3100 3376 4.619679 AGAGAAGCCTTATCCTTCAGACT 58.380 43.478 0.00 0.00 40.83 3.24
3101 3377 5.029474 AGAGAAGCCTTATCCTTCAGACTT 58.971 41.667 0.00 0.00 40.83 3.01
3102 3378 5.487131 AGAGAAGCCTTATCCTTCAGACTTT 59.513 40.000 0.00 0.00 40.83 2.66
3103 3379 5.739959 AGAAGCCTTATCCTTCAGACTTTC 58.260 41.667 4.24 0.00 40.83 2.62
3104 3380 5.487131 AGAAGCCTTATCCTTCAGACTTTCT 59.513 40.000 4.24 0.00 40.83 2.52
3105 3381 5.096443 AGCCTTATCCTTCAGACTTTCTG 57.904 43.478 0.00 0.00 45.59 3.02
3106 3382 4.080638 AGCCTTATCCTTCAGACTTTCTGG 60.081 45.833 3.40 0.00 44.39 3.86
3107 3383 4.080863 GCCTTATCCTTCAGACTTTCTGGA 60.081 45.833 3.40 0.00 44.39 3.86
3108 3384 5.423886 CCTTATCCTTCAGACTTTCTGGAC 58.576 45.833 3.40 0.00 44.39 4.02
3109 3385 3.601443 ATCCTTCAGACTTTCTGGACG 57.399 47.619 3.40 0.00 44.39 4.79
3110 3386 2.317040 TCCTTCAGACTTTCTGGACGT 58.683 47.619 3.40 0.00 44.39 4.34
3111 3387 2.035961 TCCTTCAGACTTTCTGGACGTG 59.964 50.000 0.00 0.00 44.39 4.49
3112 3388 2.224066 CCTTCAGACTTTCTGGACGTGT 60.224 50.000 0.00 0.00 44.39 4.49
3113 3389 3.458189 CTTCAGACTTTCTGGACGTGTT 58.542 45.455 0.00 0.00 44.39 3.32
3114 3390 2.821546 TCAGACTTTCTGGACGTGTTG 58.178 47.619 0.00 0.00 44.39 3.33
3115 3391 1.867233 CAGACTTTCTGGACGTGTTGG 59.133 52.381 0.00 0.00 40.71 3.77
3116 3392 1.485066 AGACTTTCTGGACGTGTTGGT 59.515 47.619 0.00 0.00 0.00 3.67
3117 3393 2.093128 AGACTTTCTGGACGTGTTGGTT 60.093 45.455 0.00 0.00 0.00 3.67
3118 3394 2.681344 GACTTTCTGGACGTGTTGGTTT 59.319 45.455 0.00 0.00 0.00 3.27
3119 3395 2.681344 ACTTTCTGGACGTGTTGGTTTC 59.319 45.455 0.00 0.00 0.00 2.78
3120 3396 1.670791 TTCTGGACGTGTTGGTTTCC 58.329 50.000 0.00 0.00 0.00 3.13
3121 3397 0.542333 TCTGGACGTGTTGGTTTCCA 59.458 50.000 0.00 0.00 36.67 3.53
3122 3398 1.065345 TCTGGACGTGTTGGTTTCCAA 60.065 47.619 0.00 0.00 41.69 3.53
3123 3399 1.953686 CTGGACGTGTTGGTTTCCAAT 59.046 47.619 0.00 0.00 45.80 3.16
3124 3400 1.950909 TGGACGTGTTGGTTTCCAATC 59.049 47.619 0.00 0.00 45.80 2.67
3125 3401 2.227194 GGACGTGTTGGTTTCCAATCT 58.773 47.619 0.00 0.00 45.80 2.40
3126 3402 2.031157 GGACGTGTTGGTTTCCAATCTG 60.031 50.000 0.00 1.06 45.80 2.90
3127 3403 2.616842 GACGTGTTGGTTTCCAATCTGT 59.383 45.455 0.00 3.92 45.80 3.41
3128 3404 2.616842 ACGTGTTGGTTTCCAATCTGTC 59.383 45.455 4.51 0.00 45.80 3.51
3129 3405 2.616376 CGTGTTGGTTTCCAATCTGTCA 59.384 45.455 4.51 0.00 45.80 3.58
3130 3406 3.253188 CGTGTTGGTTTCCAATCTGTCAT 59.747 43.478 4.51 0.00 45.80 3.06
3131 3407 4.261572 CGTGTTGGTTTCCAATCTGTCATT 60.262 41.667 4.51 0.00 45.80 2.57
3132 3408 5.600696 GTGTTGGTTTCCAATCTGTCATTT 58.399 37.500 4.51 0.00 45.80 2.32
3133 3409 6.048509 GTGTTGGTTTCCAATCTGTCATTTT 58.951 36.000 4.51 0.00 45.80 1.82
3134 3410 7.206687 GTGTTGGTTTCCAATCTGTCATTTTA 58.793 34.615 4.51 0.00 45.80 1.52
3135 3411 7.872483 GTGTTGGTTTCCAATCTGTCATTTTAT 59.128 33.333 4.51 0.00 45.80 1.40
3136 3412 8.087750 TGTTGGTTTCCAATCTGTCATTTTATC 58.912 33.333 4.51 0.00 45.80 1.75
3137 3413 7.773489 TGGTTTCCAATCTGTCATTTTATCA 57.227 32.000 0.00 0.00 0.00 2.15
3138 3414 7.829725 TGGTTTCCAATCTGTCATTTTATCAG 58.170 34.615 0.00 0.00 0.00 2.90
3139 3415 7.669304 TGGTTTCCAATCTGTCATTTTATCAGA 59.331 33.333 0.00 0.00 41.43 3.27
3140 3416 8.522830 GGTTTCCAATCTGTCATTTTATCAGAA 58.477 33.333 0.00 0.00 40.73 3.02
3141 3417 9.565213 GTTTCCAATCTGTCATTTTATCAGAAG 57.435 33.333 0.00 0.00 40.73 2.85
3142 3418 7.870509 TCCAATCTGTCATTTTATCAGAAGG 57.129 36.000 0.00 0.00 40.73 3.46
3143 3419 7.405292 TCCAATCTGTCATTTTATCAGAAGGT 58.595 34.615 0.00 0.00 40.73 3.50
3144 3420 7.890127 TCCAATCTGTCATTTTATCAGAAGGTT 59.110 33.333 0.00 0.00 40.73 3.50
3145 3421 8.186821 CCAATCTGTCATTTTATCAGAAGGTTC 58.813 37.037 0.00 0.00 40.73 3.62
3146 3422 7.872113 ATCTGTCATTTTATCAGAAGGTTCC 57.128 36.000 0.00 0.00 40.73 3.62
3147 3423 5.874810 TCTGTCATTTTATCAGAAGGTTCCG 59.125 40.000 0.00 0.00 35.65 4.30
3148 3424 4.394920 TGTCATTTTATCAGAAGGTTCCGC 59.605 41.667 0.00 0.00 0.00 5.54
3149 3425 3.945285 TCATTTTATCAGAAGGTTCCGCC 59.055 43.478 0.00 0.00 37.58 6.13
3150 3426 3.426787 TTTTATCAGAAGGTTCCGCCA 57.573 42.857 0.00 0.00 40.61 5.69
3151 3427 3.426787 TTTATCAGAAGGTTCCGCCAA 57.573 42.857 0.00 0.00 40.61 4.52
3152 3428 3.644966 TTATCAGAAGGTTCCGCCAAT 57.355 42.857 0.00 0.00 40.61 3.16
3153 3429 2.514458 ATCAGAAGGTTCCGCCAATT 57.486 45.000 0.00 0.00 40.61 2.32
3154 3430 2.286365 TCAGAAGGTTCCGCCAATTT 57.714 45.000 0.00 0.00 40.61 1.82
3155 3431 3.426787 TCAGAAGGTTCCGCCAATTTA 57.573 42.857 0.00 0.00 40.61 1.40
3156 3432 3.963129 TCAGAAGGTTCCGCCAATTTAT 58.037 40.909 0.00 0.00 40.61 1.40
3157 3433 3.945285 TCAGAAGGTTCCGCCAATTTATC 59.055 43.478 0.00 0.00 40.61 1.75
3158 3434 3.694072 CAGAAGGTTCCGCCAATTTATCA 59.306 43.478 0.00 0.00 40.61 2.15
3159 3435 3.694566 AGAAGGTTCCGCCAATTTATCAC 59.305 43.478 0.00 0.00 40.61 3.06
3160 3436 3.366052 AGGTTCCGCCAATTTATCACT 57.634 42.857 0.00 0.00 40.61 3.41
3161 3437 4.497291 AGGTTCCGCCAATTTATCACTA 57.503 40.909 0.00 0.00 40.61 2.74
3162 3438 4.196971 AGGTTCCGCCAATTTATCACTAC 58.803 43.478 0.00 0.00 40.61 2.73
3163 3439 4.080526 AGGTTCCGCCAATTTATCACTACT 60.081 41.667 0.00 0.00 40.61 2.57
3164 3440 4.035208 GGTTCCGCCAATTTATCACTACTG 59.965 45.833 0.00 0.00 37.17 2.74
3165 3441 4.481368 TCCGCCAATTTATCACTACTGT 57.519 40.909 0.00 0.00 0.00 3.55
3166 3442 5.601583 TCCGCCAATTTATCACTACTGTA 57.398 39.130 0.00 0.00 0.00 2.74
3167 3443 5.597806 TCCGCCAATTTATCACTACTGTAG 58.402 41.667 13.13 13.13 0.00 2.74
3168 3444 5.128171 TCCGCCAATTTATCACTACTGTAGT 59.872 40.000 14.53 14.53 40.28 2.73
3169 3445 5.815740 CCGCCAATTTATCACTACTGTAGTT 59.184 40.000 17.46 7.49 36.76 2.24
3170 3446 6.315393 CCGCCAATTTATCACTACTGTAGTTT 59.685 38.462 17.46 10.79 36.76 2.66
3171 3447 7.493320 CCGCCAATTTATCACTACTGTAGTTTA 59.507 37.037 17.46 9.58 36.76 2.01
3172 3448 8.540492 CGCCAATTTATCACTACTGTAGTTTAG 58.460 37.037 17.46 7.50 36.76 1.85
3173 3449 9.379791 GCCAATTTATCACTACTGTAGTTTAGT 57.620 33.333 17.46 6.98 36.76 2.24
3177 3453 9.784680 ATTTATCACTACTGTAGTTTAGTGTCG 57.215 33.333 17.46 4.77 40.39 4.35
3178 3454 5.039480 TCACTACTGTAGTTTAGTGTCGC 57.961 43.478 17.46 0.00 40.39 5.19
3179 3455 4.758674 TCACTACTGTAGTTTAGTGTCGCT 59.241 41.667 17.46 0.00 40.39 4.93
3180 3456 5.240183 TCACTACTGTAGTTTAGTGTCGCTT 59.760 40.000 17.46 0.00 40.39 4.68
3181 3457 5.342525 CACTACTGTAGTTTAGTGTCGCTTG 59.657 44.000 17.46 0.00 36.76 4.01
3182 3458 3.057734 ACTGTAGTTTAGTGTCGCTTGC 58.942 45.455 0.00 0.00 0.00 4.01
3183 3459 3.243771 ACTGTAGTTTAGTGTCGCTTGCT 60.244 43.478 0.00 0.00 0.00 3.91
3184 3460 3.314553 TGTAGTTTAGTGTCGCTTGCTC 58.685 45.455 0.00 0.00 0.00 4.26
3185 3461 2.821991 AGTTTAGTGTCGCTTGCTCT 57.178 45.000 0.00 0.00 0.00 4.09
3186 3462 3.113260 AGTTTAGTGTCGCTTGCTCTT 57.887 42.857 0.00 0.00 0.00 2.85
3187 3463 2.802816 AGTTTAGTGTCGCTTGCTCTTG 59.197 45.455 0.00 0.00 0.00 3.02
3188 3464 2.526304 TTAGTGTCGCTTGCTCTTGT 57.474 45.000 0.00 0.00 0.00 3.16
3189 3465 2.526304 TAGTGTCGCTTGCTCTTGTT 57.474 45.000 0.00 0.00 0.00 2.83
3190 3466 1.668419 AGTGTCGCTTGCTCTTGTTT 58.332 45.000 0.00 0.00 0.00 2.83
3191 3467 1.331756 AGTGTCGCTTGCTCTTGTTTG 59.668 47.619 0.00 0.00 0.00 2.93
3192 3468 0.029300 TGTCGCTTGCTCTTGTTTGC 59.971 50.000 0.00 0.00 0.00 3.68
3193 3469 0.661483 GTCGCTTGCTCTTGTTTGCC 60.661 55.000 0.00 0.00 0.00 4.52
3194 3470 1.727022 CGCTTGCTCTTGTTTGCCG 60.727 57.895 0.00 0.00 0.00 5.69
3195 3471 2.018324 GCTTGCTCTTGTTTGCCGC 61.018 57.895 0.00 0.00 0.00 6.53
3196 3472 1.359833 CTTGCTCTTGTTTGCCGCA 59.640 52.632 0.00 0.00 0.00 5.69
3197 3473 0.662374 CTTGCTCTTGTTTGCCGCAG 60.662 55.000 0.00 0.00 31.63 5.18
3198 3474 1.100463 TTGCTCTTGTTTGCCGCAGA 61.100 50.000 0.00 0.00 31.63 4.26
3199 3475 1.081840 GCTCTTGTTTGCCGCAGAC 60.082 57.895 7.09 7.09 0.00 3.51
3200 3476 1.576421 CTCTTGTTTGCCGCAGACC 59.424 57.895 11.26 0.00 0.00 3.85
3201 3477 0.886490 CTCTTGTTTGCCGCAGACCT 60.886 55.000 11.26 0.00 0.00 3.85
3202 3478 0.884704 TCTTGTTTGCCGCAGACCTC 60.885 55.000 11.26 0.00 0.00 3.85
3203 3479 0.886490 CTTGTTTGCCGCAGACCTCT 60.886 55.000 11.26 0.00 0.00 3.69
3204 3480 0.394938 TTGTTTGCCGCAGACCTCTA 59.605 50.000 11.26 0.00 0.00 2.43
3205 3481 0.613260 TGTTTGCCGCAGACCTCTAT 59.387 50.000 11.26 0.00 0.00 1.98
3206 3482 1.003118 TGTTTGCCGCAGACCTCTATT 59.997 47.619 11.26 0.00 0.00 1.73
3207 3483 2.084546 GTTTGCCGCAGACCTCTATTT 58.915 47.619 2.59 0.00 0.00 1.40
3208 3484 2.488153 GTTTGCCGCAGACCTCTATTTT 59.512 45.455 2.59 0.00 0.00 1.82
3209 3485 2.024176 TGCCGCAGACCTCTATTTTC 57.976 50.000 0.00 0.00 0.00 2.29
3214 3490 2.432510 CGCAGACCTCTATTTTCTCCCT 59.567 50.000 0.00 0.00 0.00 4.20
3220 3496 6.717084 CAGACCTCTATTTTCTCCCTGTTTTT 59.283 38.462 0.00 0.00 0.00 1.94
3238 3514 7.361201 CCTGTTTTTCTGATTGACGATGTACAT 60.361 37.037 8.43 8.43 0.00 2.29
3241 3517 7.665561 TTTTCTGATTGACGATGTACATTCA 57.334 32.000 10.30 7.97 0.00 2.57
3246 3522 7.862873 TCTGATTGACGATGTACATTCAGATAC 59.137 37.037 22.85 11.74 42.79 2.24
3252 3528 5.747197 ACGATGTACATTCAGATACGTTTCC 59.253 40.000 10.30 0.00 0.00 3.13
3259 3535 2.980568 TCAGATACGTTTCCGCCAAAT 58.019 42.857 0.00 0.00 37.70 2.32
3269 3545 5.098893 CGTTTCCGCCAAATGATGAATAAA 58.901 37.500 0.00 0.00 33.28 1.40
3272 3548 7.201513 CGTTTCCGCCAAATGATGAATAAATTT 60.202 33.333 0.00 0.00 33.28 1.82
3327 3608 3.222173 AGACTGATAGAGAGGCACGAT 57.778 47.619 0.00 0.00 0.00 3.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.937519 TGTGTTGTGCCATCTTTGGTA 58.062 42.857 0.00 0.00 45.57 3.25
5 6 1.774110 TGTGTTGTGCCATCTTTGGT 58.226 45.000 0.00 0.00 45.57 3.67
6 7 2.886862 TTGTGTTGTGCCATCTTTGG 57.113 45.000 0.00 0.00 46.66 3.28
7 8 3.719924 ACATTGTGTTGTGCCATCTTTG 58.280 40.909 0.00 0.00 0.00 2.77
8 9 4.405116 AACATTGTGTTGTGCCATCTTT 57.595 36.364 0.00 0.00 39.45 2.52
65 66 2.136298 TCACTGTGGCAAAGGAACAA 57.864 45.000 9.97 0.00 0.00 2.83
104 105 4.019231 TCTGGTAGCTAGTCTCTCTGTTCA 60.019 45.833 0.00 0.00 0.00 3.18
116 117 3.990092 TGTGTGTTTGTCTGGTAGCTAG 58.010 45.455 0.00 0.00 0.00 3.42
117 118 4.409718 TTGTGTGTTTGTCTGGTAGCTA 57.590 40.909 0.00 0.00 0.00 3.32
118 119 3.275617 TTGTGTGTTTGTCTGGTAGCT 57.724 42.857 0.00 0.00 0.00 3.32
119 120 4.036262 TCATTTGTGTGTTTGTCTGGTAGC 59.964 41.667 0.00 0.00 0.00 3.58
137 138 6.041979 AGCTTTGGATTAGTGTGGTTTCATTT 59.958 34.615 0.00 0.00 0.00 2.32
164 165 0.370273 CGGCAGTTCGTGATTAGTGC 59.630 55.000 0.00 0.00 39.44 4.40
171 172 0.250124 ATTTGGTCGGCAGTTCGTGA 60.250 50.000 0.00 0.00 0.00 4.35
198 199 7.201741 GCTAAAATTGGAGGGAAGAGTGAATAC 60.202 40.741 0.00 0.00 0.00 1.89
204 205 3.333680 TGGCTAAAATTGGAGGGAAGAGT 59.666 43.478 0.00 0.00 0.00 3.24
258 262 2.825532 GGAGTTCAGGGCTTGCATTTTA 59.174 45.455 0.00 0.00 0.00 1.52
269 273 1.601171 CTCTGCAGGGAGTTCAGGG 59.399 63.158 8.28 0.00 0.00 4.45
277 281 2.366167 CCTCCTCCTCTGCAGGGA 59.634 66.667 17.43 18.52 40.80 4.20
458 476 2.202932 ATGACGCATCACTCGGCC 60.203 61.111 0.00 0.00 37.79 6.13
467 486 1.670811 GATTTGAACCGGATGACGCAT 59.329 47.619 9.46 0.00 42.52 4.73
468 487 1.083489 GATTTGAACCGGATGACGCA 58.917 50.000 9.46 0.00 42.52 5.24
469 488 1.083489 TGATTTGAACCGGATGACGC 58.917 50.000 9.46 0.00 42.52 5.19
492 511 1.074471 AGCGGGGGTGGTCTCATAT 60.074 57.895 0.00 0.00 0.00 1.78
581 609 1.202734 CGGGAGTGCAGGATGATGATT 60.203 52.381 0.00 0.00 39.69 2.57
600 628 4.376819 GCAATGAGTGAGAAACTGAGAACG 60.377 45.833 0.00 0.00 40.07 3.95
648 676 2.082629 TATGCACGGCGTCGATCCAT 62.083 55.000 20.03 17.02 40.11 3.41
650 678 0.944311 AATATGCACGGCGTCGATCC 60.944 55.000 20.03 3.83 40.11 3.36
656 684 1.508632 GGATACAATATGCACGGCGT 58.491 50.000 6.77 6.77 0.00 5.68
657 685 0.438445 CGGATACAATATGCACGGCG 59.562 55.000 4.80 4.80 0.00 6.46
682 710 2.247637 GCAACCGCGGAATAGAAAAAC 58.752 47.619 35.90 4.70 0.00 2.43
844 872 0.974010 TACTCGCGATCTTGGGGGTT 60.974 55.000 10.36 0.00 36.77 4.11
846 874 1.364171 CTACTCGCGATCTTGGGGG 59.636 63.158 10.36 0.00 0.00 5.40
857 885 0.811616 CTGATTGTGGGGCTACTCGC 60.812 60.000 0.00 0.00 38.13 5.03
872 906 8.037758 GTGCAGATATTTATACCAGTAGCTGAT 58.962 37.037 0.00 0.00 33.63 2.90
904 938 6.605194 TGTAAGTAGATGCCAAATTGCCAATA 59.395 34.615 0.00 0.00 0.00 1.90
923 957 8.954350 AGTACGTATGTTGTATCTCTTGTAAGT 58.046 33.333 0.00 0.00 0.00 2.24
924 958 9.435802 GAGTACGTATGTTGTATCTCTTGTAAG 57.564 37.037 0.00 0.00 0.00 2.34
925 959 8.949177 TGAGTACGTATGTTGTATCTCTTGTAA 58.051 33.333 0.00 0.00 0.00 2.41
1176 1234 2.362760 TAGGGCGCCGAGGTGTAA 60.363 61.111 22.54 0.00 0.00 2.41
1356 1414 3.359523 CCGTCGTCCTGGTCGTCA 61.360 66.667 12.76 0.00 0.00 4.35
1448 1506 2.264794 GCGCCTTCTTCTTCGGGA 59.735 61.111 0.00 0.00 0.00 5.14
1475 1533 1.410517 TGTTTTCACGTACCGGTGGTA 59.589 47.619 19.93 0.00 38.46 3.25
1495 1553 0.035630 GTCAAGAGCTGCCAGGACAT 60.036 55.000 0.00 0.00 0.00 3.06
1537 1616 2.430921 CACTCACGTCGTCAGGCC 60.431 66.667 0.15 0.00 0.00 5.19
1546 1625 1.197949 CGATCAGACAGACACTCACGT 59.802 52.381 0.00 0.00 0.00 4.49
1640 1720 0.254178 TCCATTGCTCTCTTCCTGGC 59.746 55.000 0.00 0.00 0.00 4.85
1659 1739 1.724582 GCACGTTGTTGTTGGCCTCT 61.725 55.000 3.32 0.00 0.00 3.69
1864 1950 0.855349 GTTGGCGCATCTACTGATCG 59.145 55.000 10.83 0.00 0.00 3.69
1865 1951 0.855349 CGTTGGCGCATCTACTGATC 59.145 55.000 10.83 0.00 0.00 2.92
1892 1978 0.451135 GCTTCATCACGACGTTGTGC 60.451 55.000 27.90 13.65 39.73 4.57
1960 2047 0.798776 AGCCGCTCGTTGATCTTTTG 59.201 50.000 0.00 0.00 0.00 2.44
2133 2254 2.770164 ACTTGATGTAGTGGACTGCC 57.230 50.000 0.00 0.00 0.00 4.85
2166 2287 0.673644 CGCAGGAACCGACCTTGATT 60.674 55.000 0.00 0.00 38.32 2.57
2219 2341 3.426615 AGTTGTTCAAAACACTGGGTCA 58.573 40.909 0.00 0.00 41.97 4.02
2247 2422 0.681243 GGAAGGGGAATGGTCAGCAC 60.681 60.000 0.00 0.00 0.00 4.40
2249 2424 1.452108 CGGAAGGGGAATGGTCAGC 60.452 63.158 0.00 0.00 0.00 4.26
2256 2431 1.002134 CTGTGCACGGAAGGGGAAT 60.002 57.895 21.59 0.00 35.70 3.01
2259 2434 3.850098 AAGCTGTGCACGGAAGGGG 62.850 63.158 29.83 5.80 32.68 4.79
2263 2438 0.662619 CTCAAAAGCTGTGCACGGAA 59.337 50.000 29.83 1.97 0.00 4.30
2265 2440 1.370900 GCTCAAAAGCTGTGCACGG 60.371 57.895 21.79 21.79 45.55 4.94
2266 2441 4.216963 GCTCAAAAGCTGTGCACG 57.783 55.556 13.13 8.32 45.55 5.34
2381 2618 2.431260 CCGACGTTGTACCCGGTG 60.431 66.667 0.00 0.00 37.40 4.94
2382 2619 4.362476 GCCGACGTTGTACCCGGT 62.362 66.667 12.04 0.00 43.51 5.28
2384 2621 3.976902 GAGGCCGACGTTGTACCCG 62.977 68.421 0.00 0.96 0.00 5.28
2385 2622 2.125793 GAGGCCGACGTTGTACCC 60.126 66.667 0.00 0.00 0.00 3.69
2386 2623 2.505557 CGAGGCCGACGTTGTACC 60.506 66.667 15.25 2.99 38.22 3.34
2387 2624 2.562912 TCGAGGCCGACGTTGTAC 59.437 61.111 20.74 0.00 40.30 2.90
2395 2632 1.379977 ATCTTGAGGTCGAGGCCGA 60.380 57.895 0.00 0.00 43.35 5.54
2396 2633 1.066587 GATCTTGAGGTCGAGGCCG 59.933 63.158 0.00 0.00 37.07 6.13
2397 2634 1.066587 CGATCTTGAGGTCGAGGCC 59.933 63.158 7.89 0.00 40.11 5.19
2398 2635 1.590259 GCGATCTTGAGGTCGAGGC 60.590 63.158 17.16 0.00 40.11 4.70
2399 2636 0.030101 GAGCGATCTTGAGGTCGAGG 59.970 60.000 17.16 0.00 40.11 4.63
2400 2637 1.021202 AGAGCGATCTTGAGGTCGAG 58.979 55.000 17.16 0.00 40.11 4.04
2401 2638 0.735471 CAGAGCGATCTTGAGGTCGA 59.265 55.000 17.16 0.00 40.11 4.20
2402 2639 0.869454 GCAGAGCGATCTTGAGGTCG 60.869 60.000 0.00 9.22 39.58 4.79
2403 2640 0.529555 GGCAGAGCGATCTTGAGGTC 60.530 60.000 0.00 0.00 35.33 3.85
2404 2641 1.519719 GGCAGAGCGATCTTGAGGT 59.480 57.895 0.00 0.00 0.00 3.85
2405 2642 1.591059 CGGCAGAGCGATCTTGAGG 60.591 63.158 0.00 0.00 0.00 3.86
2406 2643 2.236382 GCGGCAGAGCGATCTTGAG 61.236 63.158 0.00 0.00 0.00 3.02
2407 2644 2.202797 GCGGCAGAGCGATCTTGA 60.203 61.111 0.00 0.00 0.00 3.02
2408 2645 2.510012 TGCGGCAGAGCGATCTTG 60.510 61.111 0.00 0.00 40.67 3.02
2409 2646 2.202851 CTGCGGCAGAGCGATCTT 60.203 61.111 25.33 0.00 40.67 2.40
2410 2647 4.887987 GCTGCGGCAGAGCGATCT 62.888 66.667 32.72 0.00 40.67 2.75
2420 2657 2.025727 GCTGATCATTGCTGCGGC 59.974 61.111 11.65 11.65 39.26 6.53
2421 2658 0.814410 AGAGCTGATCATTGCTGCGG 60.814 55.000 13.72 0.00 39.91 5.69
2422 2659 0.305009 CAGAGCTGATCATTGCTGCG 59.695 55.000 13.72 1.78 39.91 5.18
2423 2660 0.663688 CCAGAGCTGATCATTGCTGC 59.336 55.000 13.72 5.03 39.91 5.25
2424 2661 2.214347 CTCCAGAGCTGATCATTGCTG 58.786 52.381 13.72 11.77 39.91 4.41
2425 2662 2.623878 CTCCAGAGCTGATCATTGCT 57.376 50.000 9.08 9.08 42.82 3.91
2516 2753 8.608844 TCAAGAAGGAAGAATCTAAACACTTC 57.391 34.615 0.00 0.00 38.26 3.01
2594 2831 5.398581 GGGTGGGTGAAATGGTAAGATATCA 60.399 44.000 5.32 0.00 0.00 2.15
2610 2847 2.723273 GAGGACAAATTAGGGTGGGTG 58.277 52.381 0.00 0.00 0.00 4.61
2611 2848 1.280998 CGAGGACAAATTAGGGTGGGT 59.719 52.381 0.00 0.00 0.00 4.51
2612 2849 1.557832 TCGAGGACAAATTAGGGTGGG 59.442 52.381 0.00 0.00 0.00 4.61
2613 2850 2.500098 TCTCGAGGACAAATTAGGGTGG 59.500 50.000 13.56 0.00 0.00 4.61
2635 2872 1.341852 TCCGTCGAAACAGGATTCACA 59.658 47.619 0.00 0.00 0.00 3.58
2636 2873 1.725164 GTCCGTCGAAACAGGATTCAC 59.275 52.381 0.00 0.00 36.34 3.18
2659 2896 4.773013 AGAAAACAACGGAGAAACTACCA 58.227 39.130 0.00 0.00 0.00 3.25
2660 2897 4.084693 CGAGAAAACAACGGAGAAACTACC 60.085 45.833 0.00 0.00 0.00 3.18
2672 2909 7.432252 CCATTGGCTATTAATCGAGAAAACAAC 59.568 37.037 0.00 0.00 0.00 3.32
2674 2911 6.826231 TCCATTGGCTATTAATCGAGAAAACA 59.174 34.615 0.00 0.00 0.00 2.83
2686 2923 7.626999 AGTTACACCTATCCATTGGCTATTA 57.373 36.000 0.00 0.00 0.00 0.98
2687 2924 6.515512 AGTTACACCTATCCATTGGCTATT 57.484 37.500 0.00 0.00 0.00 1.73
2688 2925 6.515512 AAGTTACACCTATCCATTGGCTAT 57.484 37.500 0.00 0.00 0.00 2.97
2689 2926 5.968676 AAGTTACACCTATCCATTGGCTA 57.031 39.130 0.00 0.00 0.00 3.93
2690 2927 4.862641 AAGTTACACCTATCCATTGGCT 57.137 40.909 0.00 0.00 0.00 4.75
2691 2928 5.531287 CCTTAAGTTACACCTATCCATTGGC 59.469 44.000 0.97 0.00 0.00 4.52
2692 2929 6.542370 CACCTTAAGTTACACCTATCCATTGG 59.458 42.308 0.97 0.00 0.00 3.16
2693 2930 7.110155 ACACCTTAAGTTACACCTATCCATTG 58.890 38.462 0.97 0.00 0.00 2.82
2694 2931 7.266905 ACACCTTAAGTTACACCTATCCATT 57.733 36.000 0.97 0.00 0.00 3.16
2695 2932 6.886178 ACACCTTAAGTTACACCTATCCAT 57.114 37.500 0.97 0.00 0.00 3.41
2696 2933 7.620491 TCATACACCTTAAGTTACACCTATCCA 59.380 37.037 0.97 0.00 0.00 3.41
2697 2934 8.015185 TCATACACCTTAAGTTACACCTATCC 57.985 38.462 0.97 0.00 0.00 2.59
2757 3033 3.364549 TGAACAGGGCCTTAAATCCATG 58.635 45.455 1.32 5.95 39.78 3.66
2759 3035 2.378547 ACTGAACAGGGCCTTAAATCCA 59.621 45.455 1.32 0.00 0.00 3.41
2761 3037 5.007724 CGATAACTGAACAGGGCCTTAAATC 59.992 44.000 1.32 0.00 0.00 2.17
2762 3038 4.881850 CGATAACTGAACAGGGCCTTAAAT 59.118 41.667 1.32 0.00 0.00 1.40
2763 3039 4.258543 CGATAACTGAACAGGGCCTTAAA 58.741 43.478 1.32 0.00 0.00 1.52
2766 3042 1.679032 GCGATAACTGAACAGGGCCTT 60.679 52.381 1.32 0.00 0.00 4.35
2767 3043 0.107654 GCGATAACTGAACAGGGCCT 60.108 55.000 0.00 0.00 0.00 5.19
2768 3044 1.095807 GGCGATAACTGAACAGGGCC 61.096 60.000 0.00 0.00 0.00 5.80
2769 3045 1.095807 GGGCGATAACTGAACAGGGC 61.096 60.000 6.76 0.79 0.00 5.19
2770 3046 0.810031 CGGGCGATAACTGAACAGGG 60.810 60.000 6.76 0.00 0.00 4.45
2771 3047 1.429148 GCGGGCGATAACTGAACAGG 61.429 60.000 6.76 0.00 0.00 4.00
2772 3048 0.460284 AGCGGGCGATAACTGAACAG 60.460 55.000 0.00 0.00 0.00 3.16
2773 3049 0.459585 GAGCGGGCGATAACTGAACA 60.460 55.000 0.00 0.00 0.00 3.18
2774 3050 1.152383 GGAGCGGGCGATAACTGAAC 61.152 60.000 0.00 0.00 0.00 3.18
2775 3051 1.143183 GGAGCGGGCGATAACTGAA 59.857 57.895 0.00 0.00 0.00 3.02
2776 3052 2.812499 GGAGCGGGCGATAACTGA 59.188 61.111 0.00 0.00 0.00 3.41
2777 3053 2.658593 CGGAGCGGGCGATAACTG 60.659 66.667 0.00 0.00 0.00 3.16
2778 3054 3.912907 CCGGAGCGGGCGATAACT 61.913 66.667 0.00 0.00 44.15 2.24
2794 3070 4.918201 CCCGCTCCGCAGATTCCC 62.918 72.222 0.00 0.00 0.00 3.97
2795 3071 4.918201 CCCCGCTCCGCAGATTCC 62.918 72.222 0.00 0.00 0.00 3.01
2796 3072 2.869503 TTTCCCCGCTCCGCAGATTC 62.870 60.000 0.00 0.00 0.00 2.52
2797 3073 2.966732 TTTCCCCGCTCCGCAGATT 61.967 57.895 0.00 0.00 0.00 2.40
2798 3074 3.399181 TTTCCCCGCTCCGCAGAT 61.399 61.111 0.00 0.00 0.00 2.90
2799 3075 4.388499 GTTTCCCCGCTCCGCAGA 62.388 66.667 0.00 0.00 0.00 4.26
2800 3076 4.697756 TGTTTCCCCGCTCCGCAG 62.698 66.667 0.00 0.00 0.00 5.18
2801 3077 4.697756 CTGTTTCCCCGCTCCGCA 62.698 66.667 0.00 0.00 0.00 5.69
2803 3079 4.697756 TGCTGTTTCCCCGCTCCG 62.698 66.667 0.00 0.00 0.00 4.63
2804 3080 2.747855 CTGCTGTTTCCCCGCTCC 60.748 66.667 0.00 0.00 0.00 4.70
2805 3081 3.435186 GCTGCTGTTTCCCCGCTC 61.435 66.667 0.00 0.00 0.00 5.03
2806 3082 3.909086 GAGCTGCTGTTTCCCCGCT 62.909 63.158 7.01 0.00 0.00 5.52
2807 3083 3.435186 GAGCTGCTGTTTCCCCGC 61.435 66.667 7.01 0.00 0.00 6.13
2808 3084 2.747855 GGAGCTGCTGTTTCCCCG 60.748 66.667 7.01 0.00 0.00 5.73
2809 3085 2.747855 CGGAGCTGCTGTTTCCCC 60.748 66.667 7.01 0.00 0.00 4.81
2822 3098 0.662619 TGCAGTTCAAAACAGCGGAG 59.337 50.000 0.00 0.00 45.66 4.63
2823 3099 2.787191 TGCAGTTCAAAACAGCGGA 58.213 47.368 0.00 0.00 45.66 5.54
2824 3100 3.168628 CTGCAGTTCAAAACAGCGG 57.831 52.632 5.25 2.29 45.66 5.52
2825 3101 2.498892 GCTGCAGTTCAAAACAGCG 58.501 52.632 16.64 0.58 45.66 5.18
2827 3103 2.378806 CGAAGCTGCAGTTCAAAACAG 58.621 47.619 16.64 1.22 0.00 3.16
2828 3104 2.473530 CGAAGCTGCAGTTCAAAACA 57.526 45.000 16.64 0.00 0.00 2.83
2843 3119 2.815647 GGAGCGAGGTTGGCGAAG 60.816 66.667 0.00 0.00 35.00 3.79
2844 3120 4.388499 GGGAGCGAGGTTGGCGAA 62.388 66.667 0.00 0.00 35.00 4.70
2848 3124 4.148825 CTCCGGGAGCGAGGTTGG 62.149 72.222 11.83 0.00 0.00 3.77
2849 3125 2.943978 AACTCCGGGAGCGAGGTTG 61.944 63.158 23.84 0.00 33.31 3.77
2850 3126 2.603776 AACTCCGGGAGCGAGGTT 60.604 61.111 23.84 8.33 33.31 3.50
2851 3127 3.382832 CAACTCCGGGAGCGAGGT 61.383 66.667 23.84 1.66 33.31 3.85
2852 3128 3.382832 ACAACTCCGGGAGCGAGG 61.383 66.667 23.84 12.72 33.31 4.63
2853 3129 2.125912 CACAACTCCGGGAGCGAG 60.126 66.667 23.84 15.43 32.04 5.03
2854 3130 3.691342 CCACAACTCCGGGAGCGA 61.691 66.667 23.84 0.00 32.04 4.93
2855 3131 3.649277 CTCCACAACTCCGGGAGCG 62.649 68.421 23.84 17.06 41.53 5.03
2856 3132 2.266055 CTCCACAACTCCGGGAGC 59.734 66.667 23.84 0.00 41.53 4.70
2858 3134 3.691342 CGCTCCACAACTCCGGGA 61.691 66.667 0.00 0.00 0.00 5.14
2859 3135 4.760047 CCGCTCCACAACTCCGGG 62.760 72.222 0.00 0.00 35.54 5.73
2860 3136 3.649277 CTCCGCTCCACAACTCCGG 62.649 68.421 0.00 0.00 40.25 5.14
2861 3137 2.125912 CTCCGCTCCACAACTCCG 60.126 66.667 0.00 0.00 0.00 4.63
2862 3138 1.374758 CACTCCGCTCCACAACTCC 60.375 63.158 0.00 0.00 0.00 3.85
2863 3139 1.374758 CCACTCCGCTCCACAACTC 60.375 63.158 0.00 0.00 0.00 3.01
2864 3140 0.830444 TACCACTCCGCTCCACAACT 60.830 55.000 0.00 0.00 0.00 3.16
2865 3141 0.669625 GTACCACTCCGCTCCACAAC 60.670 60.000 0.00 0.00 0.00 3.32
2866 3142 1.669440 GTACCACTCCGCTCCACAA 59.331 57.895 0.00 0.00 0.00 3.33
2867 3143 2.280552 GGTACCACTCCGCTCCACA 61.281 63.158 7.15 0.00 0.00 4.17
2868 3144 2.577593 GGTACCACTCCGCTCCAC 59.422 66.667 7.15 0.00 0.00 4.02
2869 3145 3.066190 CGGTACCACTCCGCTCCA 61.066 66.667 13.54 0.00 41.48 3.86
2870 3146 2.345760 TTCGGTACCACTCCGCTCC 61.346 63.158 13.54 0.00 46.49 4.70
2871 3147 1.153881 GTTCGGTACCACTCCGCTC 60.154 63.158 13.54 0.00 46.49 5.03
2872 3148 1.904865 TGTTCGGTACCACTCCGCT 60.905 57.895 13.54 0.00 46.49 5.52
2873 3149 1.735559 GTGTTCGGTACCACTCCGC 60.736 63.158 13.54 0.00 46.49 5.54
2875 3151 4.565531 CGTGTTCGGTACCACTCC 57.434 61.111 13.54 0.00 0.00 3.85
2885 3161 1.444836 TGGAATTTAGGCCGTGTTCG 58.555 50.000 0.00 0.00 0.00 3.95
2886 3162 2.554893 TGTTGGAATTTAGGCCGTGTTC 59.445 45.455 0.00 0.64 0.00 3.18
2887 3163 2.588620 TGTTGGAATTTAGGCCGTGTT 58.411 42.857 0.00 0.00 0.00 3.32
2888 3164 2.279935 TGTTGGAATTTAGGCCGTGT 57.720 45.000 0.00 0.00 0.00 4.49
2889 3165 3.243068 GCTATGTTGGAATTTAGGCCGTG 60.243 47.826 0.00 0.00 0.00 4.94
2890 3166 2.949644 GCTATGTTGGAATTTAGGCCGT 59.050 45.455 0.00 0.00 0.00 5.68
2891 3167 2.948979 TGCTATGTTGGAATTTAGGCCG 59.051 45.455 0.00 0.00 0.00 6.13
2892 3168 3.243535 GCTGCTATGTTGGAATTTAGGCC 60.244 47.826 0.00 0.00 0.00 5.19
2893 3169 3.381272 TGCTGCTATGTTGGAATTTAGGC 59.619 43.478 0.00 0.00 0.00 3.93
2894 3170 4.037208 CCTGCTGCTATGTTGGAATTTAGG 59.963 45.833 0.00 0.00 0.00 2.69
2895 3171 4.037208 CCCTGCTGCTATGTTGGAATTTAG 59.963 45.833 0.00 0.00 0.00 1.85
2896 3172 3.953612 CCCTGCTGCTATGTTGGAATTTA 59.046 43.478 0.00 0.00 0.00 1.40
2897 3173 2.762327 CCCTGCTGCTATGTTGGAATTT 59.238 45.455 0.00 0.00 0.00 1.82
2914 3190 1.171308 CAGCACCATTGTCTTCCCTG 58.829 55.000 0.00 0.00 0.00 4.45
2947 3223 9.267084 CTAATAATTTTAGGAGGTGCTCTCTTC 57.733 37.037 7.40 0.00 42.10 2.87
2951 3227 7.283329 CACCTAATAATTTTAGGAGGTGCTCT 58.717 38.462 22.59 5.45 45.33 4.09
2952 3228 7.497925 CACCTAATAATTTTAGGAGGTGCTC 57.502 40.000 22.59 0.00 45.33 4.26
2957 3233 8.448816 AGGGAATCACCTAATAATTTTAGGAGG 58.551 37.037 22.59 16.69 43.24 4.30
2958 3234 9.868160 AAGGGAATCACCTAATAATTTTAGGAG 57.132 33.333 22.59 17.72 43.24 3.69
2974 3250 6.657541 TCTTACAACCAACATAAGGGAATCAC 59.342 38.462 0.00 0.00 0.00 3.06
2982 3258 3.181524 CGCCGTCTTACAACCAACATAAG 60.182 47.826 0.00 0.00 0.00 1.73
2990 3266 0.669625 AAGAGCGCCGTCTTACAACC 60.670 55.000 9.94 0.00 34.90 3.77
2998 3274 0.179215 CAACAATGAAGAGCGCCGTC 60.179 55.000 2.29 4.20 0.00 4.79
2999 3275 1.868997 CAACAATGAAGAGCGCCGT 59.131 52.632 2.29 0.00 0.00 5.68
3000 3276 1.512734 GCAACAATGAAGAGCGCCG 60.513 57.895 2.29 0.00 0.00 6.46
3001 3277 0.455633 CTGCAACAATGAAGAGCGCC 60.456 55.000 2.29 0.00 33.54 6.53
3002 3278 1.069378 GCTGCAACAATGAAGAGCGC 61.069 55.000 0.00 0.00 33.54 5.92
3003 3279 0.520404 AGCTGCAACAATGAAGAGCG 59.480 50.000 1.02 0.00 33.54 5.03
3004 3280 1.402456 CCAGCTGCAACAATGAAGAGC 60.402 52.381 8.66 0.00 33.54 4.09
3005 3281 2.156917 TCCAGCTGCAACAATGAAGAG 58.843 47.619 8.66 0.00 33.54 2.85
3006 3282 2.275134 TCCAGCTGCAACAATGAAGA 57.725 45.000 8.66 0.00 33.54 2.87
3007 3283 2.159282 GGATCCAGCTGCAACAATGAAG 60.159 50.000 8.66 0.00 35.03 3.02
3008 3284 1.820519 GGATCCAGCTGCAACAATGAA 59.179 47.619 8.66 0.00 0.00 2.57
3009 3285 1.272037 TGGATCCAGCTGCAACAATGA 60.272 47.619 11.44 0.00 0.00 2.57
3010 3286 1.179152 TGGATCCAGCTGCAACAATG 58.821 50.000 11.44 0.00 0.00 2.82
3011 3287 1.927487 TTGGATCCAGCTGCAACAAT 58.073 45.000 15.53 0.00 0.00 2.71
3012 3288 1.546923 CATTGGATCCAGCTGCAACAA 59.453 47.619 15.53 10.68 28.76 2.83
3013 3289 1.179152 CATTGGATCCAGCTGCAACA 58.821 50.000 15.53 0.00 28.76 3.33
3014 3290 1.133790 GTCATTGGATCCAGCTGCAAC 59.866 52.381 15.53 8.21 28.76 4.17
3015 3291 1.272037 TGTCATTGGATCCAGCTGCAA 60.272 47.619 15.53 7.61 0.00 4.08
3016 3292 0.328926 TGTCATTGGATCCAGCTGCA 59.671 50.000 15.53 14.56 0.00 4.41
3017 3293 1.688772 ATGTCATTGGATCCAGCTGC 58.311 50.000 15.53 12.48 0.00 5.25
3018 3294 6.213677 CAAAATATGTCATTGGATCCAGCTG 58.786 40.000 15.53 16.15 0.00 4.24
3019 3295 5.303589 CCAAAATATGTCATTGGATCCAGCT 59.696 40.000 15.53 3.65 45.14 4.24
3020 3296 5.302568 TCCAAAATATGTCATTGGATCCAGC 59.697 40.000 15.53 7.55 45.71 4.85
3021 3297 6.964807 TCCAAAATATGTCATTGGATCCAG 57.035 37.500 15.53 4.43 45.71 3.86
3027 3303 9.956720 GAAAGATACTCCAAAATATGTCATTGG 57.043 33.333 0.00 0.00 43.97 3.16
3028 3304 9.655769 CGAAAGATACTCCAAAATATGTCATTG 57.344 33.333 0.00 0.00 0.00 2.82
3029 3305 8.345565 GCGAAAGATACTCCAAAATATGTCATT 58.654 33.333 0.00 0.00 0.00 2.57
3030 3306 7.041098 GGCGAAAGATACTCCAAAATATGTCAT 60.041 37.037 0.00 0.00 0.00 3.06
3031 3307 6.260050 GGCGAAAGATACTCCAAAATATGTCA 59.740 38.462 0.00 0.00 0.00 3.58
3032 3308 6.483640 AGGCGAAAGATACTCCAAAATATGTC 59.516 38.462 0.00 0.00 0.00 3.06
3033 3309 6.357367 AGGCGAAAGATACTCCAAAATATGT 58.643 36.000 0.00 0.00 0.00 2.29
3034 3310 6.867662 AGGCGAAAGATACTCCAAAATATG 57.132 37.500 0.00 0.00 0.00 1.78
3035 3311 7.054124 TGAAGGCGAAAGATACTCCAAAATAT 58.946 34.615 0.00 0.00 0.00 1.28
3036 3312 6.411376 TGAAGGCGAAAGATACTCCAAAATA 58.589 36.000 0.00 0.00 0.00 1.40
3037 3313 5.253330 TGAAGGCGAAAGATACTCCAAAAT 58.747 37.500 0.00 0.00 0.00 1.82
3038 3314 4.647611 TGAAGGCGAAAGATACTCCAAAA 58.352 39.130 0.00 0.00 0.00 2.44
3039 3315 4.253685 CTGAAGGCGAAAGATACTCCAAA 58.746 43.478 0.00 0.00 0.00 3.28
3040 3316 3.260884 ACTGAAGGCGAAAGATACTCCAA 59.739 43.478 0.00 0.00 0.00 3.53
3041 3317 2.832129 ACTGAAGGCGAAAGATACTCCA 59.168 45.455 0.00 0.00 0.00 3.86
3042 3318 3.528597 ACTGAAGGCGAAAGATACTCC 57.471 47.619 0.00 0.00 0.00 3.85
3043 3319 4.361420 GGTACTGAAGGCGAAAGATACTC 58.639 47.826 0.00 0.00 0.00 2.59
3044 3320 3.181489 CGGTACTGAAGGCGAAAGATACT 60.181 47.826 0.00 0.00 0.00 2.12
3045 3321 3.114065 CGGTACTGAAGGCGAAAGATAC 58.886 50.000 0.00 0.00 0.00 2.24
3046 3322 2.756760 ACGGTACTGAAGGCGAAAGATA 59.243 45.455 9.17 0.00 0.00 1.98
3047 3323 1.549170 ACGGTACTGAAGGCGAAAGAT 59.451 47.619 9.17 0.00 0.00 2.40
3048 3324 0.963962 ACGGTACTGAAGGCGAAAGA 59.036 50.000 9.17 0.00 0.00 2.52
3049 3325 1.725164 GAACGGTACTGAAGGCGAAAG 59.275 52.381 9.17 0.00 0.00 2.62
3050 3326 1.342174 AGAACGGTACTGAAGGCGAAA 59.658 47.619 9.17 0.00 0.00 3.46
3051 3327 0.963962 AGAACGGTACTGAAGGCGAA 59.036 50.000 9.17 0.00 0.00 4.70
3052 3328 0.963962 AAGAACGGTACTGAAGGCGA 59.036 50.000 9.17 0.00 0.00 5.54
3053 3329 1.459592 CAAAGAACGGTACTGAAGGCG 59.540 52.381 9.17 0.00 0.00 5.52
3054 3330 1.804748 CCAAAGAACGGTACTGAAGGC 59.195 52.381 9.17 0.00 0.00 4.35
3055 3331 3.064931 GTCCAAAGAACGGTACTGAAGG 58.935 50.000 9.17 1.07 0.00 3.46
3056 3332 2.729882 CGTCCAAAGAACGGTACTGAAG 59.270 50.000 9.17 0.00 36.51 3.02
3057 3333 2.361757 TCGTCCAAAGAACGGTACTGAA 59.638 45.455 9.17 0.00 40.45 3.02
3058 3334 1.955778 TCGTCCAAAGAACGGTACTGA 59.044 47.619 9.17 0.00 40.45 3.41
3059 3335 2.030540 TCTCGTCCAAAGAACGGTACTG 60.031 50.000 0.00 0.00 40.45 2.74
3060 3336 2.228343 CTCTCGTCCAAAGAACGGTACT 59.772 50.000 0.00 0.00 40.45 2.73
3061 3337 2.227388 TCTCTCGTCCAAAGAACGGTAC 59.773 50.000 0.00 0.00 40.45 3.34
3062 3338 2.507484 TCTCTCGTCCAAAGAACGGTA 58.493 47.619 0.00 0.00 40.45 4.02
3063 3339 1.325355 TCTCTCGTCCAAAGAACGGT 58.675 50.000 0.00 0.00 40.45 4.83
3064 3340 2.329379 CTTCTCTCGTCCAAAGAACGG 58.671 52.381 0.00 0.00 40.45 4.44
3065 3341 1.721926 GCTTCTCTCGTCCAAAGAACG 59.278 52.381 0.00 0.00 41.39 3.95
3066 3342 2.070028 GGCTTCTCTCGTCCAAAGAAC 58.930 52.381 0.00 0.00 0.00 3.01
3067 3343 1.971357 AGGCTTCTCTCGTCCAAAGAA 59.029 47.619 0.00 0.00 0.00 2.52
3068 3344 1.633774 AGGCTTCTCTCGTCCAAAGA 58.366 50.000 0.00 0.00 0.00 2.52
3069 3345 2.464157 AAGGCTTCTCTCGTCCAAAG 57.536 50.000 0.00 0.00 0.00 2.77
3070 3346 3.118738 GGATAAGGCTTCTCTCGTCCAAA 60.119 47.826 1.30 0.00 0.00 3.28
3071 3347 2.431057 GGATAAGGCTTCTCTCGTCCAA 59.569 50.000 1.30 0.00 0.00 3.53
3072 3348 2.032620 GGATAAGGCTTCTCTCGTCCA 58.967 52.381 1.30 0.00 0.00 4.02
3073 3349 2.312390 AGGATAAGGCTTCTCTCGTCC 58.688 52.381 1.30 3.51 0.00 4.79
3074 3350 3.381908 TGAAGGATAAGGCTTCTCTCGTC 59.618 47.826 1.30 6.57 0.00 4.20
3075 3351 3.366396 TGAAGGATAAGGCTTCTCTCGT 58.634 45.455 1.30 0.00 0.00 4.18
3076 3352 3.634448 TCTGAAGGATAAGGCTTCTCTCG 59.366 47.826 1.30 0.00 0.00 4.04
3077 3353 4.649218 AGTCTGAAGGATAAGGCTTCTCTC 59.351 45.833 1.30 0.00 0.00 3.20
3078 3354 4.619679 AGTCTGAAGGATAAGGCTTCTCT 58.380 43.478 1.30 0.00 0.00 3.10
3079 3355 5.351948 AAGTCTGAAGGATAAGGCTTCTC 57.648 43.478 1.30 3.02 33.05 2.87
3080 3356 5.487131 AGAAAGTCTGAAGGATAAGGCTTCT 59.513 40.000 1.30 0.00 37.37 2.85
3081 3357 5.739959 AGAAAGTCTGAAGGATAAGGCTTC 58.260 41.667 1.30 0.00 37.37 3.86
3082 3358 5.770685 AGAAAGTCTGAAGGATAAGGCTT 57.229 39.130 4.58 4.58 40.00 4.35
3095 3371 1.867233 CCAACACGTCCAGAAAGTCTG 59.133 52.381 0.00 0.00 43.91 3.51
3096 3372 1.485066 ACCAACACGTCCAGAAAGTCT 59.515 47.619 0.00 0.00 0.00 3.24
3097 3373 1.949465 ACCAACACGTCCAGAAAGTC 58.051 50.000 0.00 0.00 0.00 3.01
3098 3374 2.413310 AACCAACACGTCCAGAAAGT 57.587 45.000 0.00 0.00 0.00 2.66
3099 3375 2.032924 GGAAACCAACACGTCCAGAAAG 59.967 50.000 0.00 0.00 0.00 2.62
3100 3376 2.018515 GGAAACCAACACGTCCAGAAA 58.981 47.619 0.00 0.00 0.00 2.52
3101 3377 1.065345 TGGAAACCAACACGTCCAGAA 60.065 47.619 0.00 0.00 35.22 3.02
3102 3378 0.542333 TGGAAACCAACACGTCCAGA 59.458 50.000 0.00 0.00 35.22 3.86
3103 3379 1.384525 TTGGAAACCAACACGTCCAG 58.615 50.000 0.00 0.00 41.10 3.86
3104 3380 1.950909 GATTGGAAACCAACACGTCCA 59.049 47.619 5.33 0.00 46.95 4.02
3105 3381 2.031157 CAGATTGGAAACCAACACGTCC 60.031 50.000 5.33 0.00 46.95 4.79
3106 3382 2.616842 ACAGATTGGAAACCAACACGTC 59.383 45.455 5.33 0.26 46.95 4.34
3107 3383 2.616842 GACAGATTGGAAACCAACACGT 59.383 45.455 5.33 3.34 46.95 4.49
3108 3384 2.616376 TGACAGATTGGAAACCAACACG 59.384 45.455 5.33 0.36 46.95 4.49
3109 3385 4.853924 ATGACAGATTGGAAACCAACAC 57.146 40.909 5.33 3.91 46.95 3.32
3110 3386 5.867903 AAATGACAGATTGGAAACCAACA 57.132 34.783 5.33 0.00 46.95 3.33
3111 3387 8.087750 TGATAAAATGACAGATTGGAAACCAAC 58.912 33.333 5.33 1.16 46.95 3.77
3113 3389 7.669304 TCTGATAAAATGACAGATTGGAAACCA 59.331 33.333 0.00 0.00 36.04 3.67
3114 3390 8.055279 TCTGATAAAATGACAGATTGGAAACC 57.945 34.615 0.00 0.00 36.04 3.27
3115 3391 9.565213 CTTCTGATAAAATGACAGATTGGAAAC 57.435 33.333 0.00 0.00 39.78 2.78
3116 3392 8.742777 CCTTCTGATAAAATGACAGATTGGAAA 58.257 33.333 0.00 0.00 39.78 3.13
3117 3393 7.890127 ACCTTCTGATAAAATGACAGATTGGAA 59.110 33.333 4.22 0.00 39.78 3.53
3118 3394 7.405292 ACCTTCTGATAAAATGACAGATTGGA 58.595 34.615 4.22 0.00 39.78 3.53
3119 3395 7.636150 ACCTTCTGATAAAATGACAGATTGG 57.364 36.000 0.00 0.00 39.78 3.16
3120 3396 8.186821 GGAACCTTCTGATAAAATGACAGATTG 58.813 37.037 0.00 0.00 39.78 2.67
3121 3397 7.066284 CGGAACCTTCTGATAAAATGACAGATT 59.934 37.037 0.00 0.00 39.78 2.40
3122 3398 6.540189 CGGAACCTTCTGATAAAATGACAGAT 59.460 38.462 0.00 0.00 39.78 2.90
3123 3399 5.874810 CGGAACCTTCTGATAAAATGACAGA 59.125 40.000 0.00 0.00 38.61 3.41
3124 3400 5.447818 GCGGAACCTTCTGATAAAATGACAG 60.448 44.000 0.00 0.00 35.56 3.51
3125 3401 4.394920 GCGGAACCTTCTGATAAAATGACA 59.605 41.667 0.00 0.00 35.56 3.58
3126 3402 4.201920 GGCGGAACCTTCTGATAAAATGAC 60.202 45.833 0.00 0.00 35.56 3.06
3127 3403 3.945285 GGCGGAACCTTCTGATAAAATGA 59.055 43.478 0.00 0.00 35.56 2.57
3128 3404 3.694072 TGGCGGAACCTTCTGATAAAATG 59.306 43.478 0.00 0.00 40.22 2.32
3129 3405 3.963129 TGGCGGAACCTTCTGATAAAAT 58.037 40.909 0.00 0.00 40.22 1.82
3130 3406 3.426787 TGGCGGAACCTTCTGATAAAA 57.573 42.857 0.00 0.00 40.22 1.52
3131 3407 3.426787 TTGGCGGAACCTTCTGATAAA 57.573 42.857 0.00 0.00 40.22 1.40
3132 3408 3.644966 ATTGGCGGAACCTTCTGATAA 57.355 42.857 0.00 0.00 40.22 1.75
3133 3409 3.644966 AATTGGCGGAACCTTCTGATA 57.355 42.857 0.00 0.00 40.22 2.15
3134 3410 2.514458 AATTGGCGGAACCTTCTGAT 57.486 45.000 0.00 0.00 40.22 2.90
3135 3411 2.286365 AAATTGGCGGAACCTTCTGA 57.714 45.000 0.00 0.00 40.22 3.27
3136 3412 3.694072 TGATAAATTGGCGGAACCTTCTG 59.306 43.478 0.00 0.00 40.22 3.02
3137 3413 3.694566 GTGATAAATTGGCGGAACCTTCT 59.305 43.478 0.00 0.00 40.22 2.85
3138 3414 3.694566 AGTGATAAATTGGCGGAACCTTC 59.305 43.478 0.00 0.00 40.22 3.46
3139 3415 3.697166 AGTGATAAATTGGCGGAACCTT 58.303 40.909 0.00 0.00 40.22 3.50
3140 3416 3.366052 AGTGATAAATTGGCGGAACCT 57.634 42.857 0.00 0.00 40.22 3.50
3141 3417 4.035208 CAGTAGTGATAAATTGGCGGAACC 59.965 45.833 0.00 0.00 39.84 3.62
3142 3418 4.634443 ACAGTAGTGATAAATTGGCGGAAC 59.366 41.667 4.09 0.00 0.00 3.62
3143 3419 4.839121 ACAGTAGTGATAAATTGGCGGAA 58.161 39.130 4.09 0.00 0.00 4.30
3144 3420 4.481368 ACAGTAGTGATAAATTGGCGGA 57.519 40.909 4.09 0.00 0.00 5.54
3145 3421 5.357257 ACTACAGTAGTGATAAATTGGCGG 58.643 41.667 12.75 0.00 37.69 6.13
3146 3422 6.903883 AACTACAGTAGTGATAAATTGGCG 57.096 37.500 14.25 0.00 39.39 5.69
3147 3423 9.379791 ACTAAACTACAGTAGTGATAAATTGGC 57.620 33.333 14.25 0.00 39.39 4.52
3151 3427 9.784680 CGACACTAAACTACAGTAGTGATAAAT 57.215 33.333 14.25 0.00 46.75 1.40
3152 3428 7.752239 GCGACACTAAACTACAGTAGTGATAAA 59.248 37.037 14.25 0.00 46.75 1.40
3153 3429 7.120285 AGCGACACTAAACTACAGTAGTGATAA 59.880 37.037 14.25 0.00 46.75 1.75
3154 3430 6.596888 AGCGACACTAAACTACAGTAGTGATA 59.403 38.462 14.25 9.57 46.75 2.15
3155 3431 5.415077 AGCGACACTAAACTACAGTAGTGAT 59.585 40.000 14.25 8.94 46.75 3.06
3156 3432 4.758674 AGCGACACTAAACTACAGTAGTGA 59.241 41.667 14.25 4.87 46.75 3.41
3158 3434 5.458891 CAAGCGACACTAAACTACAGTAGT 58.541 41.667 7.48 7.48 41.73 2.73
3159 3435 4.323868 GCAAGCGACACTAAACTACAGTAG 59.676 45.833 6.00 6.00 0.00 2.57
3160 3436 4.022589 AGCAAGCGACACTAAACTACAGTA 60.023 41.667 0.00 0.00 0.00 2.74
3161 3437 3.057734 GCAAGCGACACTAAACTACAGT 58.942 45.455 0.00 0.00 0.00 3.55
3162 3438 3.318017 AGCAAGCGACACTAAACTACAG 58.682 45.455 0.00 0.00 0.00 2.74
3163 3439 3.005472 AGAGCAAGCGACACTAAACTACA 59.995 43.478 0.00 0.00 0.00 2.74
3164 3440 3.576648 AGAGCAAGCGACACTAAACTAC 58.423 45.455 0.00 0.00 0.00 2.73
3165 3441 3.936372 AGAGCAAGCGACACTAAACTA 57.064 42.857 0.00 0.00 0.00 2.24
3166 3442 2.802816 CAAGAGCAAGCGACACTAAACT 59.197 45.455 0.00 0.00 0.00 2.66
3167 3443 2.544267 ACAAGAGCAAGCGACACTAAAC 59.456 45.455 0.00 0.00 0.00 2.01
3168 3444 2.833794 ACAAGAGCAAGCGACACTAAA 58.166 42.857 0.00 0.00 0.00 1.85
3169 3445 2.526304 ACAAGAGCAAGCGACACTAA 57.474 45.000 0.00 0.00 0.00 2.24
3170 3446 2.526304 AACAAGAGCAAGCGACACTA 57.474 45.000 0.00 0.00 0.00 2.74
3171 3447 1.331756 CAAACAAGAGCAAGCGACACT 59.668 47.619 0.00 0.00 0.00 3.55
3172 3448 1.746760 CAAACAAGAGCAAGCGACAC 58.253 50.000 0.00 0.00 0.00 3.67
3173 3449 0.029300 GCAAACAAGAGCAAGCGACA 59.971 50.000 0.00 0.00 0.00 4.35
3174 3450 0.661483 GGCAAACAAGAGCAAGCGAC 60.661 55.000 0.00 0.00 0.00 5.19
3175 3451 1.654220 GGCAAACAAGAGCAAGCGA 59.346 52.632 0.00 0.00 0.00 4.93
3176 3452 1.727022 CGGCAAACAAGAGCAAGCG 60.727 57.895 0.00 0.00 0.00 4.68
3177 3453 2.018324 GCGGCAAACAAGAGCAAGC 61.018 57.895 0.00 0.00 0.00 4.01
3178 3454 0.662374 CTGCGGCAAACAAGAGCAAG 60.662 55.000 3.44 0.00 37.38 4.01
3179 3455 1.100463 TCTGCGGCAAACAAGAGCAA 61.100 50.000 3.44 0.00 37.38 3.91
3180 3456 1.525765 TCTGCGGCAAACAAGAGCA 60.526 52.632 3.44 0.00 36.34 4.26
3181 3457 1.081840 GTCTGCGGCAAACAAGAGC 60.082 57.895 3.44 0.00 0.00 4.09
3182 3458 0.886490 AGGTCTGCGGCAAACAAGAG 60.886 55.000 8.90 0.00 0.00 2.85
3183 3459 0.884704 GAGGTCTGCGGCAAACAAGA 60.885 55.000 8.90 0.00 0.00 3.02
3184 3460 0.886490 AGAGGTCTGCGGCAAACAAG 60.886 55.000 8.90 0.00 0.00 3.16
3185 3461 0.394938 TAGAGGTCTGCGGCAAACAA 59.605 50.000 8.90 0.00 0.00 2.83
3186 3462 0.613260 ATAGAGGTCTGCGGCAAACA 59.387 50.000 8.90 0.00 0.00 2.83
3187 3463 1.739067 AATAGAGGTCTGCGGCAAAC 58.261 50.000 3.44 0.00 0.00 2.93
3188 3464 2.489938 AAATAGAGGTCTGCGGCAAA 57.510 45.000 3.44 0.00 0.00 3.68
3189 3465 2.027192 AGAAAATAGAGGTCTGCGGCAA 60.027 45.455 3.44 0.00 0.00 4.52
3190 3466 1.555075 AGAAAATAGAGGTCTGCGGCA 59.445 47.619 1.29 1.29 0.00 5.69
3191 3467 2.205911 GAGAAAATAGAGGTCTGCGGC 58.794 52.381 0.00 0.00 0.00 6.53
3192 3468 2.483889 GGGAGAAAATAGAGGTCTGCGG 60.484 54.545 0.00 0.00 31.06 5.69
3193 3469 2.432510 AGGGAGAAAATAGAGGTCTGCG 59.567 50.000 0.00 0.00 31.06 5.18
3194 3470 3.198853 ACAGGGAGAAAATAGAGGTCTGC 59.801 47.826 0.00 0.00 0.00 4.26
3195 3471 5.428184 AACAGGGAGAAAATAGAGGTCTG 57.572 43.478 0.00 0.00 0.00 3.51
3196 3472 6.455690 AAAACAGGGAGAAAATAGAGGTCT 57.544 37.500 0.00 0.00 0.00 3.85
3197 3473 6.943146 AGAAAAACAGGGAGAAAATAGAGGTC 59.057 38.462 0.00 0.00 0.00 3.85
3198 3474 6.717084 CAGAAAAACAGGGAGAAAATAGAGGT 59.283 38.462 0.00 0.00 0.00 3.85
3199 3475 6.942576 TCAGAAAAACAGGGAGAAAATAGAGG 59.057 38.462 0.00 0.00 0.00 3.69
3200 3476 7.986085 TCAGAAAAACAGGGAGAAAATAGAG 57.014 36.000 0.00 0.00 0.00 2.43
3201 3477 8.796475 CAATCAGAAAAACAGGGAGAAAATAGA 58.204 33.333 0.00 0.00 0.00 1.98
3202 3478 8.796475 TCAATCAGAAAAACAGGGAGAAAATAG 58.204 33.333 0.00 0.00 0.00 1.73
3203 3479 8.576442 GTCAATCAGAAAAACAGGGAGAAAATA 58.424 33.333 0.00 0.00 0.00 1.40
3204 3480 7.436933 GTCAATCAGAAAAACAGGGAGAAAAT 58.563 34.615 0.00 0.00 0.00 1.82
3205 3481 6.459573 CGTCAATCAGAAAAACAGGGAGAAAA 60.460 38.462 0.00 0.00 0.00 2.29
3206 3482 5.008613 CGTCAATCAGAAAAACAGGGAGAAA 59.991 40.000 0.00 0.00 0.00 2.52
3207 3483 4.515191 CGTCAATCAGAAAAACAGGGAGAA 59.485 41.667 0.00 0.00 0.00 2.87
3208 3484 4.065088 CGTCAATCAGAAAAACAGGGAGA 58.935 43.478 0.00 0.00 0.00 3.71
3209 3485 4.065088 TCGTCAATCAGAAAAACAGGGAG 58.935 43.478 0.00 0.00 0.00 4.30
3214 3490 6.852858 TGTACATCGTCAATCAGAAAAACA 57.147 33.333 0.00 0.00 0.00 2.83
3220 3496 6.207691 TCTGAATGTACATCGTCAATCAGA 57.792 37.500 22.85 22.85 43.65 3.27
3252 3528 7.492020 TCAAGGAAATTTATTCATCATTTGGCG 59.508 33.333 0.00 0.00 0.00 5.69
3259 3535 6.405731 CCGCCTTCAAGGAAATTTATTCATCA 60.406 38.462 7.98 0.00 37.67 3.07
3269 3545 3.372440 AGAATCCGCCTTCAAGGAAAT 57.628 42.857 7.98 0.00 40.32 2.17
3272 3548 3.992943 TTTAGAATCCGCCTTCAAGGA 57.007 42.857 7.98 0.00 37.67 3.36
3314 3595 5.958955 CATGATGAATATCGTGCCTCTCTA 58.041 41.667 0.00 0.00 41.85 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.