Multiple sequence alignment - TraesCS4B01G256300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G256300 chr4B 100.000 3546 0 0 1 3546 521713617 521710072 0.000000e+00 6549.0
1 TraesCS4B01G256300 chr4B 81.250 112 13 6 2701 2807 102406872 102406980 2.270000e-12 84.2
2 TraesCS4B01G256300 chr4A 94.792 2304 96 14 689 2982 39270493 39272782 0.000000e+00 3568.0
3 TraesCS4B01G256300 chr4A 92.475 505 17 4 2983 3478 641603673 641604165 0.000000e+00 702.0
4 TraesCS4B01G256300 chr4A 91.667 60 5 0 3487 3546 39272798 39272857 2.270000e-12 84.2
5 TraesCS4B01G256300 chr4D 93.636 2294 105 18 697 2982 425698413 425696153 0.000000e+00 3389.0
6 TraesCS4B01G256300 chr4D 95.588 68 3 0 3479 3546 425696160 425696093 3.740000e-20 110.0
7 TraesCS4B01G256300 chr1D 94.444 486 19 2 2982 3459 183710624 183711109 0.000000e+00 741.0
8 TraesCS4B01G256300 chr1D 87.342 79 7 3 2691 2766 423253220 423253142 1.750000e-13 87.9
9 TraesCS4B01G256300 chr6A 93.933 478 25 4 2983 3459 335752885 335753359 0.000000e+00 719.0
10 TraesCS4B01G256300 chr7B 93.168 483 25 5 2982 3459 680849690 680850169 0.000000e+00 702.0
11 TraesCS4B01G256300 chr3D 91.632 478 35 5 2983 3459 313884546 313885019 0.000000e+00 656.0
12 TraesCS4B01G256300 chr3D 89.749 478 43 4 2983 3459 565816616 565817088 1.090000e-169 606.0
13 TraesCS4B01G256300 chr3B 90.141 497 45 3 2982 3478 799291032 799291524 0.000000e+00 643.0
14 TraesCS4B01G256300 chr5A 90.043 462 41 4 2999 3459 603476621 603477078 8.480000e-166 593.0
15 TraesCS4B01G256300 chr7D 89.254 456 46 3 2998 3452 580564838 580565291 5.140000e-158 568.0
16 TraesCS4B01G256300 chr1B 86.535 505 62 4 2982 3481 563055825 563055322 5.170000e-153 551.0
17 TraesCS4B01G256300 chr1B 85.000 100 10 5 2687 2781 572526802 572526703 2.910000e-16 97.1
18 TraesCS4B01G256300 chr1A 85.714 84 9 3 2686 2766 519255079 519254996 6.310000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G256300 chr4B 521710072 521713617 3545 True 6549.0 6549 100.0000 1 3546 1 chr4B.!!$R1 3545
1 TraesCS4B01G256300 chr4A 39270493 39272857 2364 False 1826.1 3568 93.2295 689 3546 2 chr4A.!!$F2 2857
2 TraesCS4B01G256300 chr4D 425696093 425698413 2320 True 1749.5 3389 94.6120 697 3546 2 chr4D.!!$R1 2849
3 TraesCS4B01G256300 chr1B 563055322 563055825 503 True 551.0 551 86.5350 2982 3481 1 chr1B.!!$R1 499

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
526 527 0.035439 AAGACGCATACACCTTGGGG 60.035 55.0 0.0 0.0 38.88 4.96 F
910 917 0.039256 CCATTTTGCACACCCTGACG 60.039 55.0 0.0 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1732 1740 1.065418 AGGGTTGTCCAATAAGCGGAG 60.065 52.381 0.00 0.00 38.24 4.63 R
2687 2699 1.153745 GACTCTACCACTGCGCCAG 60.154 63.158 4.18 4.99 37.52 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.064846 ACTATTTTTAAGGCTGATCATGCG 57.935 37.500 0.00 0.00 0.00 4.73
25 26 3.781079 TTTTTAAGGCTGATCATGCGG 57.219 42.857 0.00 0.00 0.00 5.69
26 27 1.024271 TTTAAGGCTGATCATGCGGC 58.976 50.000 0.00 0.00 39.45 6.53
27 28 0.181114 TTAAGGCTGATCATGCGGCT 59.819 50.000 0.00 0.00 40.05 5.52
28 29 0.533531 TAAGGCTGATCATGCGGCTG 60.534 55.000 9.84 0.00 40.05 4.85
29 30 3.962421 GGCTGATCATGCGGCTGC 61.962 66.667 11.65 11.65 40.05 5.25
42 43 2.125952 GCTGCGGCCAAATCCAAC 60.126 61.111 6.12 0.00 0.00 3.77
43 44 2.573340 CTGCGGCCAAATCCAACC 59.427 61.111 2.24 0.00 0.00 3.77
44 45 2.203552 TGCGGCCAAATCCAACCA 60.204 55.556 2.24 0.00 0.00 3.67
45 46 1.814772 CTGCGGCCAAATCCAACCAA 61.815 55.000 2.24 0.00 0.00 3.67
46 47 1.369321 GCGGCCAAATCCAACCAAA 59.631 52.632 2.24 0.00 0.00 3.28
47 48 0.036483 GCGGCCAAATCCAACCAAAT 60.036 50.000 2.24 0.00 0.00 2.32
48 49 1.724429 CGGCCAAATCCAACCAAATG 58.276 50.000 2.24 0.00 0.00 2.32
49 50 1.675415 CGGCCAAATCCAACCAAATGG 60.675 52.381 2.24 0.00 42.12 3.16
50 51 1.339920 GGCCAAATCCAACCAAATGGG 60.340 52.381 0.00 0.00 41.05 4.00
61 62 1.379527 CCAAATGGGTCGGTCTTAGC 58.620 55.000 0.00 0.00 0.00 3.09
62 63 1.339631 CCAAATGGGTCGGTCTTAGCA 60.340 52.381 0.00 0.00 0.00 3.49
63 64 1.737793 CAAATGGGTCGGTCTTAGCAC 59.262 52.381 0.00 0.00 0.00 4.40
64 65 0.108329 AATGGGTCGGTCTTAGCACG 60.108 55.000 0.00 0.00 0.00 5.34
65 66 2.508663 GGGTCGGTCTTAGCACGC 60.509 66.667 0.00 0.00 0.00 5.34
66 67 2.508663 GGTCGGTCTTAGCACGCC 60.509 66.667 0.00 0.00 0.00 5.68
67 68 2.879462 GTCGGTCTTAGCACGCCG 60.879 66.667 0.00 0.00 44.95 6.46
69 70 2.879462 CGGTCTTAGCACGCCGAC 60.879 66.667 0.00 0.00 46.33 4.79
70 71 2.508663 GGTCTTAGCACGCCGACC 60.509 66.667 0.00 6.90 39.14 4.79
71 72 2.572284 GTCTTAGCACGCCGACCT 59.428 61.111 0.00 0.00 0.00 3.85
72 73 1.660560 GGTCTTAGCACGCCGACCTA 61.661 60.000 12.77 0.00 42.02 3.08
73 74 0.248539 GTCTTAGCACGCCGACCTAG 60.249 60.000 0.00 0.00 0.00 3.02
74 75 0.679002 TCTTAGCACGCCGACCTAGT 60.679 55.000 0.00 0.00 0.00 2.57
75 76 1.019673 CTTAGCACGCCGACCTAGTA 58.980 55.000 0.00 0.00 0.00 1.82
76 77 1.002684 CTTAGCACGCCGACCTAGTAG 60.003 57.143 0.00 0.00 0.00 2.57
77 78 1.442526 TAGCACGCCGACCTAGTAGC 61.443 60.000 0.00 0.00 0.00 3.58
78 79 3.060020 GCACGCCGACCTAGTAGCA 62.060 63.158 0.00 0.00 0.00 3.49
79 80 1.734137 CACGCCGACCTAGTAGCAT 59.266 57.895 0.00 0.00 0.00 3.79
80 81 0.949397 CACGCCGACCTAGTAGCATA 59.051 55.000 0.00 0.00 0.00 3.14
81 82 1.540267 CACGCCGACCTAGTAGCATAT 59.460 52.381 0.00 0.00 0.00 1.78
82 83 2.030185 CACGCCGACCTAGTAGCATATT 60.030 50.000 0.00 0.00 0.00 1.28
83 84 2.626743 ACGCCGACCTAGTAGCATATTT 59.373 45.455 0.00 0.00 0.00 1.40
84 85 3.822735 ACGCCGACCTAGTAGCATATTTA 59.177 43.478 0.00 0.00 0.00 1.40
85 86 4.461781 ACGCCGACCTAGTAGCATATTTAT 59.538 41.667 0.00 0.00 0.00 1.40
86 87 5.649395 ACGCCGACCTAGTAGCATATTTATA 59.351 40.000 0.00 0.00 0.00 0.98
87 88 6.320672 ACGCCGACCTAGTAGCATATTTATAT 59.679 38.462 0.00 0.00 0.00 0.86
88 89 7.500227 ACGCCGACCTAGTAGCATATTTATATA 59.500 37.037 0.00 0.00 0.00 0.86
89 90 8.347771 CGCCGACCTAGTAGCATATTTATATAA 58.652 37.037 0.00 0.00 0.00 0.98
100 101 8.425577 AGCATATTTATATAATCAGGTCGTGC 57.574 34.615 0.00 0.00 0.00 5.34
101 102 8.260818 AGCATATTTATATAATCAGGTCGTGCT 58.739 33.333 0.00 0.00 0.00 4.40
102 103 8.331022 GCATATTTATATAATCAGGTCGTGCTG 58.669 37.037 0.00 0.00 0.00 4.41
103 104 8.820933 CATATTTATATAATCAGGTCGTGCTGG 58.179 37.037 0.00 0.00 0.00 4.85
104 105 2.526304 TATAATCAGGTCGTGCTGGC 57.474 50.000 0.00 0.00 0.00 4.85
105 106 0.541392 ATAATCAGGTCGTGCTGGCA 59.459 50.000 0.00 0.00 0.00 4.92
106 107 0.541392 TAATCAGGTCGTGCTGGCAT 59.459 50.000 0.00 0.00 0.00 4.40
107 108 1.028330 AATCAGGTCGTGCTGGCATG 61.028 55.000 8.34 8.34 0.00 4.06
108 109 2.189191 ATCAGGTCGTGCTGGCATGT 62.189 55.000 13.47 0.00 34.75 3.21
109 110 2.359107 AGGTCGTGCTGGCATGTG 60.359 61.111 13.47 1.30 34.75 3.21
110 111 2.358615 GGTCGTGCTGGCATGTGA 60.359 61.111 13.47 3.46 34.75 3.58
111 112 2.680913 GGTCGTGCTGGCATGTGAC 61.681 63.158 13.47 13.37 34.75 3.67
112 113 2.358615 TCGTGCTGGCATGTGACC 60.359 61.111 13.47 0.00 34.75 4.02
113 114 3.434319 CGTGCTGGCATGTGACCC 61.434 66.667 6.62 0.00 0.00 4.46
114 115 2.282391 GTGCTGGCATGTGACCCA 60.282 61.111 0.00 0.00 0.00 4.51
115 116 1.679977 GTGCTGGCATGTGACCCAT 60.680 57.895 0.00 0.00 0.00 4.00
116 117 1.378911 TGCTGGCATGTGACCCATC 60.379 57.895 0.00 0.00 0.00 3.51
117 118 1.077212 GCTGGCATGTGACCCATCT 60.077 57.895 0.00 0.00 0.00 2.90
118 119 0.181114 GCTGGCATGTGACCCATCTA 59.819 55.000 0.00 0.00 0.00 1.98
119 120 1.813092 GCTGGCATGTGACCCATCTAG 60.813 57.143 0.00 0.00 0.00 2.43
120 121 0.839277 TGGCATGTGACCCATCTAGG 59.161 55.000 0.00 0.00 37.03 3.02
143 144 4.021925 GCCTGGGCCGTGAGACTT 62.022 66.667 0.00 0.00 34.56 3.01
144 145 2.046892 CCTGGGCCGTGAGACTTG 60.047 66.667 0.00 0.00 0.00 3.16
145 146 2.046892 CTGGGCCGTGAGACTTGG 60.047 66.667 0.00 0.00 0.00 3.61
153 154 2.522060 GTGAGACTTGGCACGAGTG 58.478 57.895 0.00 0.00 0.00 3.51
172 173 2.824041 GGGCATCGCACGACCATT 60.824 61.111 0.00 0.00 0.00 3.16
173 174 2.406616 GGGCATCGCACGACCATTT 61.407 57.895 0.00 0.00 0.00 2.32
174 175 1.092921 GGGCATCGCACGACCATTTA 61.093 55.000 0.00 0.00 0.00 1.40
175 176 0.944386 GGCATCGCACGACCATTTAT 59.056 50.000 0.00 0.00 0.00 1.40
176 177 1.333619 GGCATCGCACGACCATTTATT 59.666 47.619 0.00 0.00 0.00 1.40
177 178 2.223479 GGCATCGCACGACCATTTATTT 60.223 45.455 0.00 0.00 0.00 1.40
178 179 3.002862 GGCATCGCACGACCATTTATTTA 59.997 43.478 0.00 0.00 0.00 1.40
179 180 4.320202 GGCATCGCACGACCATTTATTTAT 60.320 41.667 0.00 0.00 0.00 1.40
180 181 5.212194 GCATCGCACGACCATTTATTTATT 58.788 37.500 0.00 0.00 0.00 1.40
181 182 5.685511 GCATCGCACGACCATTTATTTATTT 59.314 36.000 0.00 0.00 0.00 1.40
182 183 6.198216 GCATCGCACGACCATTTATTTATTTT 59.802 34.615 0.00 0.00 0.00 1.82
183 184 7.253950 GCATCGCACGACCATTTATTTATTTTT 60.254 33.333 0.00 0.00 0.00 1.94
184 185 9.227490 CATCGCACGACCATTTATTTATTTTTA 57.773 29.630 0.00 0.00 0.00 1.52
185 186 9.959749 ATCGCACGACCATTTATTTATTTTTAT 57.040 25.926 0.00 0.00 0.00 1.40
212 213 8.529476 ACAACCTAATAGGCTTAATATAGGTCG 58.471 37.037 6.17 9.23 39.63 4.79
213 214 8.746530 CAACCTAATAGGCTTAATATAGGTCGA 58.253 37.037 6.17 0.00 39.63 4.20
214 215 8.890410 ACCTAATAGGCTTAATATAGGTCGAA 57.110 34.615 6.17 0.00 39.63 3.71
215 216 9.317827 ACCTAATAGGCTTAATATAGGTCGAAA 57.682 33.333 6.17 0.00 39.63 3.46
219 220 9.841295 AATAGGCTTAATATAGGTCGAAAACAA 57.159 29.630 0.00 0.00 0.00 2.83
220 221 7.549615 AGGCTTAATATAGGTCGAAAACAAC 57.450 36.000 0.00 0.00 0.00 3.32
221 222 6.541278 AGGCTTAATATAGGTCGAAAACAACC 59.459 38.462 0.00 0.00 35.69 3.77
222 223 6.238566 GGCTTAATATAGGTCGAAAACAACCC 60.239 42.308 0.00 0.00 36.11 4.11
223 224 6.316890 GCTTAATATAGGTCGAAAACAACCCA 59.683 38.462 0.00 0.00 36.11 4.51
224 225 7.148205 GCTTAATATAGGTCGAAAACAACCCAA 60.148 37.037 0.00 0.00 36.11 4.12
225 226 8.810990 TTAATATAGGTCGAAAACAACCCAAT 57.189 30.769 0.00 0.00 36.11 3.16
226 227 9.902684 TTAATATAGGTCGAAAACAACCCAATA 57.097 29.630 0.00 0.00 36.11 1.90
227 228 8.446599 AATATAGGTCGAAAACAACCCAATAG 57.553 34.615 0.00 0.00 36.11 1.73
228 229 3.418047 AGGTCGAAAACAACCCAATAGG 58.582 45.455 0.00 0.00 43.78 2.57
229 230 2.094906 GGTCGAAAACAACCCAATAGGC 60.095 50.000 0.00 0.00 40.58 3.93
230 231 2.817844 GTCGAAAACAACCCAATAGGCT 59.182 45.455 0.00 0.00 40.58 4.58
231 232 2.817258 TCGAAAACAACCCAATAGGCTG 59.183 45.455 0.00 0.00 40.58 4.85
232 233 2.817258 CGAAAACAACCCAATAGGCTGA 59.183 45.455 0.00 0.00 40.58 4.26
233 234 3.254657 CGAAAACAACCCAATAGGCTGAA 59.745 43.478 0.00 0.00 40.58 3.02
234 235 4.082245 CGAAAACAACCCAATAGGCTGAAT 60.082 41.667 0.00 0.00 40.58 2.57
235 236 5.566627 CGAAAACAACCCAATAGGCTGAATT 60.567 40.000 0.00 0.00 40.58 2.17
236 237 5.405935 AAACAACCCAATAGGCTGAATTC 57.594 39.130 0.00 0.00 40.58 2.17
237 238 4.322057 ACAACCCAATAGGCTGAATTCT 57.678 40.909 7.05 0.00 40.58 2.40
238 239 4.019174 ACAACCCAATAGGCTGAATTCTG 58.981 43.478 7.05 7.51 40.58 3.02
239 240 4.019174 CAACCCAATAGGCTGAATTCTGT 58.981 43.478 13.17 0.00 40.58 3.41
240 241 3.624777 ACCCAATAGGCTGAATTCTGTG 58.375 45.455 13.17 4.09 40.58 3.66
241 242 2.360165 CCCAATAGGCTGAATTCTGTGC 59.640 50.000 13.17 11.01 0.00 4.57
242 243 2.032550 CCAATAGGCTGAATTCTGTGCG 59.967 50.000 13.17 0.72 0.00 5.34
243 244 1.959042 ATAGGCTGAATTCTGTGCGG 58.041 50.000 13.17 0.00 0.00 5.69
244 245 0.107703 TAGGCTGAATTCTGTGCGGG 60.108 55.000 13.17 0.00 0.00 6.13
245 246 2.486966 GCTGAATTCTGTGCGGGC 59.513 61.111 13.17 0.84 0.00 6.13
246 247 2.042831 GCTGAATTCTGTGCGGGCT 61.043 57.895 13.17 0.00 0.00 5.19
247 248 1.798735 CTGAATTCTGTGCGGGCTG 59.201 57.895 7.05 0.00 0.00 4.85
248 249 1.651240 CTGAATTCTGTGCGGGCTGG 61.651 60.000 7.05 0.00 0.00 4.85
249 250 3.056313 GAATTCTGTGCGGGCTGGC 62.056 63.158 0.00 0.00 0.00 4.85
281 282 4.697756 GCCGTGCCAGCCTGTGTA 62.698 66.667 0.00 0.00 0.00 2.90
282 283 2.031919 CCGTGCCAGCCTGTGTAA 59.968 61.111 0.00 0.00 0.00 2.41
283 284 2.325082 CCGTGCCAGCCTGTGTAAC 61.325 63.158 0.00 0.00 37.35 2.50
295 296 2.779755 TGTGTAACATAGGGGCTGTG 57.220 50.000 0.00 0.00 45.67 3.66
296 297 1.339631 TGTGTAACATAGGGGCTGTGC 60.340 52.381 0.00 0.00 45.67 4.57
297 298 2.017113 GTGTAACATAGGGGCTGTGCC 61.017 57.143 0.00 0.00 42.71 5.01
298 299 4.333352 GTGTAACATAGGGGCTGTGCCT 62.333 54.545 8.56 0.00 42.93 4.75
321 322 4.052518 GGGGAGGGCAGCATGTGT 62.053 66.667 0.00 0.00 39.31 3.72
322 323 2.753043 GGGAGGGCAGCATGTGTG 60.753 66.667 0.00 0.00 39.31 3.82
332 333 3.434319 CATGTGTGCCAGCCCGAC 61.434 66.667 0.00 0.00 0.00 4.79
333 334 3.952508 ATGTGTGCCAGCCCGACA 61.953 61.111 0.00 0.00 0.00 4.35
334 335 4.927782 TGTGTGCCAGCCCGACAC 62.928 66.667 5.12 5.12 40.38 3.67
345 346 2.433664 CCGACACGGGCCTTGTAC 60.434 66.667 16.45 8.81 44.15 2.90
346 347 2.433664 CGACACGGGCCTTGTACC 60.434 66.667 16.45 3.69 0.00 3.34
347 348 2.939261 CGACACGGGCCTTGTACCT 61.939 63.158 16.45 0.00 0.00 3.08
348 349 1.375523 GACACGGGCCTTGTACCTG 60.376 63.158 16.45 0.00 39.65 4.00
349 350 2.746277 CACGGGCCTTGTACCTGC 60.746 66.667 0.84 0.00 37.02 4.85
350 351 2.928396 ACGGGCCTTGTACCTGCT 60.928 61.111 0.84 0.00 37.02 4.24
351 352 2.436646 CGGGCCTTGTACCTGCTG 60.437 66.667 0.84 0.00 0.00 4.41
352 353 2.757077 GGGCCTTGTACCTGCTGT 59.243 61.111 0.84 0.00 0.00 4.40
353 354 1.675641 GGGCCTTGTACCTGCTGTG 60.676 63.158 0.84 0.00 0.00 3.66
354 355 2.335712 GGCCTTGTACCTGCTGTGC 61.336 63.158 0.00 0.00 0.00 4.57
355 356 2.335712 GCCTTGTACCTGCTGTGCC 61.336 63.158 0.00 0.00 0.00 5.01
356 357 1.675641 CCTTGTACCTGCTGTGCCC 60.676 63.158 0.00 0.00 0.00 5.36
357 358 1.073025 CTTGTACCTGCTGTGCCCA 59.927 57.895 0.00 0.00 0.00 5.36
358 359 0.957395 CTTGTACCTGCTGTGCCCAG 60.957 60.000 0.00 0.00 41.91 4.45
372 373 4.320456 CCAGCCAGTCCGTGCAGT 62.320 66.667 0.00 0.00 0.00 4.40
373 374 3.046087 CAGCCAGTCCGTGCAGTG 61.046 66.667 0.00 0.00 0.00 3.66
374 375 3.550431 AGCCAGTCCGTGCAGTGT 61.550 61.111 0.00 0.00 0.00 3.55
375 376 2.591715 GCCAGTCCGTGCAGTGTT 60.592 61.111 0.00 0.00 0.00 3.32
376 377 2.186826 GCCAGTCCGTGCAGTGTTT 61.187 57.895 0.00 0.00 0.00 2.83
377 378 1.648720 CCAGTCCGTGCAGTGTTTG 59.351 57.895 0.00 0.00 0.00 2.93
378 379 1.648720 CAGTCCGTGCAGTGTTTGG 59.351 57.895 0.00 0.00 0.00 3.28
379 380 2.186826 AGTCCGTGCAGTGTTTGGC 61.187 57.895 0.00 0.00 0.00 4.52
380 381 2.124529 TCCGTGCAGTGTTTGGCA 60.125 55.556 0.00 0.00 37.77 4.92
395 396 7.611213 GTGTTTGGCACATATAACTCTAGTT 57.389 36.000 0.39 0.39 46.91 2.24
396 397 7.464358 GTGTTTGGCACATATAACTCTAGTTG 58.536 38.462 5.62 0.00 46.91 3.16
397 398 7.119262 GTGTTTGGCACATATAACTCTAGTTGT 59.881 37.037 5.62 1.62 46.91 3.32
398 399 7.119116 TGTTTGGCACATATAACTCTAGTTGTG 59.881 37.037 5.62 6.91 39.30 3.33
399 400 6.294361 TGGCACATATAACTCTAGTTGTGT 57.706 37.500 12.04 8.60 38.90 3.72
400 401 6.338146 TGGCACATATAACTCTAGTTGTGTC 58.662 40.000 9.32 9.32 38.90 3.67
401 402 5.459107 GGCACATATAACTCTAGTTGTGTCG 59.541 44.000 12.04 7.85 38.90 4.35
402 403 6.034591 GCACATATAACTCTAGTTGTGTCGT 58.965 40.000 12.04 1.57 38.90 4.34
403 404 6.020599 GCACATATAACTCTAGTTGTGTCGTG 60.021 42.308 12.04 11.27 38.90 4.35
404 405 6.020599 CACATATAACTCTAGTTGTGTCGTGC 60.021 42.308 5.62 0.00 38.90 5.34
405 406 2.150397 AACTCTAGTTGTGTCGTGCC 57.850 50.000 0.00 0.00 36.80 5.01
406 407 0.039437 ACTCTAGTTGTGTCGTGCCG 60.039 55.000 0.00 0.00 0.00 5.69
407 408 0.732880 CTCTAGTTGTGTCGTGCCGG 60.733 60.000 0.00 0.00 0.00 6.13
408 409 1.736645 CTAGTTGTGTCGTGCCGGG 60.737 63.158 2.18 0.00 0.00 5.73
409 410 3.229156 TAGTTGTGTCGTGCCGGGG 62.229 63.158 2.18 0.00 0.00 5.73
410 411 4.922026 GTTGTGTCGTGCCGGGGT 62.922 66.667 2.18 0.00 0.00 4.95
411 412 4.920112 TTGTGTCGTGCCGGGGTG 62.920 66.667 2.18 0.00 0.00 4.61
426 427 3.191182 GGTGACCCATTTGGCTAGG 57.809 57.895 0.00 0.00 37.83 3.02
427 428 1.037579 GGTGACCCATTTGGCTAGGC 61.038 60.000 9.85 9.85 37.83 3.93
454 455 2.893398 GGGCGACTGACCGAATCT 59.107 61.111 0.00 0.00 29.56 2.40
455 456 1.519455 GGGCGACTGACCGAATCTG 60.519 63.158 0.00 0.00 29.56 2.90
456 457 1.215647 GGCGACTGACCGAATCTGT 59.784 57.895 0.00 0.00 41.83 3.41
459 460 3.742983 GACTGACCGAATCTGTCCC 57.257 57.895 12.61 0.00 45.80 4.46
460 461 1.187087 GACTGACCGAATCTGTCCCT 58.813 55.000 12.61 0.00 45.80 4.20
461 462 2.376109 GACTGACCGAATCTGTCCCTA 58.624 52.381 12.61 0.00 45.80 3.53
462 463 2.758979 GACTGACCGAATCTGTCCCTAA 59.241 50.000 12.61 0.00 45.80 2.69
463 464 3.375699 ACTGACCGAATCTGTCCCTAAT 58.624 45.455 2.45 0.00 34.60 1.73
464 465 3.385111 ACTGACCGAATCTGTCCCTAATC 59.615 47.826 2.45 0.00 34.60 1.75
465 466 2.361119 TGACCGAATCTGTCCCTAATCG 59.639 50.000 2.45 0.00 31.60 3.34
466 467 1.068741 ACCGAATCTGTCCCTAATCGC 59.931 52.381 0.00 0.00 0.00 4.58
467 468 1.605712 CCGAATCTGTCCCTAATCGCC 60.606 57.143 0.00 0.00 0.00 5.54
468 469 1.605712 CGAATCTGTCCCTAATCGCCC 60.606 57.143 0.00 0.00 0.00 6.13
469 470 1.694696 GAATCTGTCCCTAATCGCCCT 59.305 52.381 0.00 0.00 0.00 5.19
470 471 2.696526 ATCTGTCCCTAATCGCCCTA 57.303 50.000 0.00 0.00 0.00 3.53
471 472 2.464796 TCTGTCCCTAATCGCCCTAA 57.535 50.000 0.00 0.00 0.00 2.69
472 473 2.972348 TCTGTCCCTAATCGCCCTAAT 58.028 47.619 0.00 0.00 0.00 1.73
473 474 2.897969 TCTGTCCCTAATCGCCCTAATC 59.102 50.000 0.00 0.00 0.00 1.75
474 475 1.616865 TGTCCCTAATCGCCCTAATCG 59.383 52.381 0.00 0.00 0.00 3.34
475 476 1.617357 GTCCCTAATCGCCCTAATCGT 59.383 52.381 0.00 0.00 0.00 3.73
476 477 2.821969 GTCCCTAATCGCCCTAATCGTA 59.178 50.000 0.00 0.00 0.00 3.43
477 478 3.087031 TCCCTAATCGCCCTAATCGTAG 58.913 50.000 0.00 0.00 0.00 3.51
478 479 2.165845 CCCTAATCGCCCTAATCGTAGG 59.834 54.545 0.00 0.00 45.98 3.18
489 490 4.632153 CCTAATCGTAGGGTTGATCTTGG 58.368 47.826 0.00 0.00 43.07 3.61
490 491 2.622064 ATCGTAGGGTTGATCTTGGC 57.378 50.000 0.00 0.00 0.00 4.52
491 492 0.539986 TCGTAGGGTTGATCTTGGCC 59.460 55.000 0.00 0.00 0.00 5.36
492 493 0.251916 CGTAGGGTTGATCTTGGCCA 59.748 55.000 0.00 0.00 0.00 5.36
493 494 1.339631 CGTAGGGTTGATCTTGGCCAA 60.340 52.381 19.25 19.25 0.00 4.52
494 495 2.683742 CGTAGGGTTGATCTTGGCCAAT 60.684 50.000 20.85 4.57 0.00 3.16
495 496 1.856629 AGGGTTGATCTTGGCCAATG 58.143 50.000 20.85 13.35 0.00 2.82
496 497 1.077663 AGGGTTGATCTTGGCCAATGT 59.922 47.619 20.85 10.78 0.00 2.71
497 498 1.478105 GGGTTGATCTTGGCCAATGTC 59.522 52.381 20.85 19.42 0.00 3.06
498 499 2.450476 GGTTGATCTTGGCCAATGTCT 58.550 47.619 20.85 3.63 0.00 3.41
499 500 2.165030 GGTTGATCTTGGCCAATGTCTG 59.835 50.000 20.85 7.02 0.00 3.51
500 501 2.821969 GTTGATCTTGGCCAATGTCTGT 59.178 45.455 20.85 1.24 0.00 3.41
501 502 3.159213 TGATCTTGGCCAATGTCTGTT 57.841 42.857 20.85 1.41 0.00 3.16
502 503 4.299586 TGATCTTGGCCAATGTCTGTTA 57.700 40.909 20.85 1.53 0.00 2.41
503 504 4.264253 TGATCTTGGCCAATGTCTGTTAG 58.736 43.478 20.85 3.44 0.00 2.34
504 505 3.788227 TCTTGGCCAATGTCTGTTAGT 57.212 42.857 20.85 0.00 0.00 2.24
505 506 4.098914 TCTTGGCCAATGTCTGTTAGTT 57.901 40.909 20.85 0.00 0.00 2.24
506 507 3.820467 TCTTGGCCAATGTCTGTTAGTTG 59.180 43.478 20.85 2.08 0.00 3.16
507 508 3.500448 TGGCCAATGTCTGTTAGTTGA 57.500 42.857 0.61 0.00 0.00 3.18
508 509 3.826524 TGGCCAATGTCTGTTAGTTGAA 58.173 40.909 0.61 0.00 0.00 2.69
509 510 3.820467 TGGCCAATGTCTGTTAGTTGAAG 59.180 43.478 0.61 0.00 0.00 3.02
510 511 4.072131 GGCCAATGTCTGTTAGTTGAAGA 58.928 43.478 0.00 0.00 0.00 2.87
511 512 4.083271 GGCCAATGTCTGTTAGTTGAAGAC 60.083 45.833 0.00 0.00 40.61 3.01
512 513 4.377431 GCCAATGTCTGTTAGTTGAAGACG 60.377 45.833 0.00 0.00 42.65 4.18
513 514 4.377431 CCAATGTCTGTTAGTTGAAGACGC 60.377 45.833 0.00 0.00 42.65 5.19
514 515 3.446310 TGTCTGTTAGTTGAAGACGCA 57.554 42.857 0.00 0.00 42.65 5.24
515 516 3.990092 TGTCTGTTAGTTGAAGACGCAT 58.010 40.909 0.00 0.00 42.65 4.73
516 517 5.128992 TGTCTGTTAGTTGAAGACGCATA 57.871 39.130 0.00 0.00 42.65 3.14
517 518 4.921515 TGTCTGTTAGTTGAAGACGCATAC 59.078 41.667 0.00 0.00 42.65 2.39
518 519 4.921515 GTCTGTTAGTTGAAGACGCATACA 59.078 41.667 0.00 0.00 31.75 2.29
519 520 4.921515 TCTGTTAGTTGAAGACGCATACAC 59.078 41.667 0.00 0.00 0.00 2.90
520 521 3.991773 TGTTAGTTGAAGACGCATACACC 59.008 43.478 0.00 0.00 0.00 4.16
521 522 4.243270 GTTAGTTGAAGACGCATACACCT 58.757 43.478 0.00 0.00 0.00 4.00
522 523 3.402628 AGTTGAAGACGCATACACCTT 57.597 42.857 0.00 0.00 0.00 3.50
523 524 3.067106 AGTTGAAGACGCATACACCTTG 58.933 45.455 0.00 0.00 0.00 3.61
524 525 2.093306 TGAAGACGCATACACCTTGG 57.907 50.000 0.00 0.00 0.00 3.61
525 526 1.338674 TGAAGACGCATACACCTTGGG 60.339 52.381 0.00 0.00 0.00 4.12
526 527 0.035439 AAGACGCATACACCTTGGGG 60.035 55.000 0.00 0.00 38.88 4.96
536 537 2.439837 ACCTTGGGGTGTGCATTTG 58.560 52.632 0.00 0.00 45.43 2.32
537 538 1.120795 ACCTTGGGGTGTGCATTTGG 61.121 55.000 0.00 0.00 45.43 3.28
538 539 1.120795 CCTTGGGGTGTGCATTTGGT 61.121 55.000 0.00 0.00 0.00 3.67
539 540 0.758123 CTTGGGGTGTGCATTTGGTT 59.242 50.000 0.00 0.00 0.00 3.67
540 541 1.140652 CTTGGGGTGTGCATTTGGTTT 59.859 47.619 0.00 0.00 0.00 3.27
541 542 1.207791 TGGGGTGTGCATTTGGTTTT 58.792 45.000 0.00 0.00 0.00 2.43
542 543 1.561542 TGGGGTGTGCATTTGGTTTTT 59.438 42.857 0.00 0.00 0.00 1.94
561 562 3.357166 TTTCGGTTTGAATCGGTTTGG 57.643 42.857 0.00 0.00 36.22 3.28
562 563 1.970092 TCGGTTTGAATCGGTTTGGT 58.030 45.000 0.00 0.00 32.31 3.67
563 564 2.299521 TCGGTTTGAATCGGTTTGGTT 58.700 42.857 0.00 0.00 32.31 3.67
564 565 2.688958 TCGGTTTGAATCGGTTTGGTTT 59.311 40.909 0.00 0.00 32.31 3.27
565 566 3.881688 TCGGTTTGAATCGGTTTGGTTTA 59.118 39.130 0.00 0.00 32.31 2.01
566 567 4.519730 TCGGTTTGAATCGGTTTGGTTTAT 59.480 37.500 0.00 0.00 32.31 1.40
567 568 5.704515 TCGGTTTGAATCGGTTTGGTTTATA 59.295 36.000 0.00 0.00 32.31 0.98
568 569 5.796437 CGGTTTGAATCGGTTTGGTTTATAC 59.204 40.000 0.00 0.00 0.00 1.47
569 570 6.568081 CGGTTTGAATCGGTTTGGTTTATACA 60.568 38.462 0.00 0.00 0.00 2.29
570 571 6.804783 GGTTTGAATCGGTTTGGTTTATACAG 59.195 38.462 0.00 0.00 0.00 2.74
571 572 7.364970 GTTTGAATCGGTTTGGTTTATACAGT 58.635 34.615 0.00 0.00 0.00 3.55
572 573 7.513371 TTGAATCGGTTTGGTTTATACAGTT 57.487 32.000 0.00 0.00 0.00 3.16
573 574 7.513371 TGAATCGGTTTGGTTTATACAGTTT 57.487 32.000 0.00 0.00 0.00 2.66
574 575 8.618702 TGAATCGGTTTGGTTTATACAGTTTA 57.381 30.769 0.00 0.00 0.00 2.01
575 576 9.233649 TGAATCGGTTTGGTTTATACAGTTTAT 57.766 29.630 0.00 0.00 0.00 1.40
576 577 9.498307 GAATCGGTTTGGTTTATACAGTTTATG 57.502 33.333 0.00 0.00 0.00 1.90
577 578 7.380431 TCGGTTTGGTTTATACAGTTTATGG 57.620 36.000 0.00 0.00 0.00 2.74
578 579 6.941436 TCGGTTTGGTTTATACAGTTTATGGT 59.059 34.615 0.00 0.00 0.00 3.55
579 580 7.447853 TCGGTTTGGTTTATACAGTTTATGGTT 59.552 33.333 0.00 0.00 0.00 3.67
580 581 8.083462 CGGTTTGGTTTATACAGTTTATGGTTT 58.917 33.333 0.00 0.00 0.00 3.27
652 653 9.908152 AGTTCAGTTTTGGTAATAAGCATTTAC 57.092 29.630 0.00 0.00 32.06 2.01
653 654 9.908152 GTTCAGTTTTGGTAATAAGCATTTACT 57.092 29.630 0.00 0.00 32.06 2.24
657 658 9.620660 AGTTTTGGTAATAAGCATTTACTTTCG 57.379 29.630 0.00 0.00 32.06 3.46
658 659 8.856247 GTTTTGGTAATAAGCATTTACTTTCGG 58.144 33.333 0.00 0.00 32.06 4.30
659 660 7.690952 TTGGTAATAAGCATTTACTTTCGGT 57.309 32.000 0.00 0.00 32.06 4.69
660 661 8.789825 TTGGTAATAAGCATTTACTTTCGGTA 57.210 30.769 0.00 0.00 32.06 4.02
661 662 8.200364 TGGTAATAAGCATTTACTTTCGGTAC 57.800 34.615 0.00 0.00 31.62 3.34
662 663 7.010367 TGGTAATAAGCATTTACTTTCGGTACG 59.990 37.037 0.00 0.00 40.22 3.67
663 664 7.010460 GGTAATAAGCATTTACTTTCGGTACGT 59.990 37.037 0.00 0.00 40.01 3.57
677 678 3.241067 GGTACGTTGGATAAGCAGTCA 57.759 47.619 0.00 0.00 0.00 3.41
678 679 3.793559 GGTACGTTGGATAAGCAGTCAT 58.206 45.455 0.00 0.00 0.00 3.06
679 680 4.189231 GGTACGTTGGATAAGCAGTCATT 58.811 43.478 0.00 0.00 0.00 2.57
680 681 4.634443 GGTACGTTGGATAAGCAGTCATTT 59.366 41.667 0.00 0.00 0.00 2.32
681 682 5.123344 GGTACGTTGGATAAGCAGTCATTTT 59.877 40.000 0.00 0.00 0.00 1.82
682 683 5.046910 ACGTTGGATAAGCAGTCATTTTG 57.953 39.130 0.00 0.00 0.00 2.44
683 684 4.082787 ACGTTGGATAAGCAGTCATTTTGG 60.083 41.667 0.00 0.00 0.00 3.28
684 685 4.082787 CGTTGGATAAGCAGTCATTTTGGT 60.083 41.667 0.00 0.00 0.00 3.67
685 686 5.564651 CGTTGGATAAGCAGTCATTTTGGTT 60.565 40.000 0.00 0.00 39.38 3.67
686 687 6.348950 CGTTGGATAAGCAGTCATTTTGGTTA 60.349 38.462 0.19 0.19 41.18 2.85
687 688 7.375053 GTTGGATAAGCAGTCATTTTGGTTAA 58.625 34.615 1.67 0.00 40.57 2.01
694 695 7.524717 AGCAGTCATTTTGGTTAACTATTGT 57.475 32.000 5.42 0.00 0.00 2.71
695 696 7.593825 AGCAGTCATTTTGGTTAACTATTGTC 58.406 34.615 5.42 0.00 0.00 3.18
761 762 9.796120 TGGTTAATTCGGTTTAATCAAATGATC 57.204 29.630 0.00 0.00 31.06 2.92
762 763 9.796120 GGTTAATTCGGTTTAATCAAATGATCA 57.204 29.630 0.00 0.00 32.75 2.92
872 879 8.935844 AGTTTTGGATCAGTTTTTGTTTTCTTC 58.064 29.630 0.00 0.00 0.00 2.87
910 917 0.039256 CCATTTTGCACACCCTGACG 60.039 55.000 0.00 0.00 0.00 4.35
947 955 5.179555 AGAAAAGAAGTTGAAGACGCATACC 59.820 40.000 0.00 0.00 0.00 2.73
1072 1080 2.444706 CCATCCTCTCCCGCCTGA 60.445 66.667 0.00 0.00 0.00 3.86
1175 1183 2.038975 CGGGGAGGACCAAGAGGA 59.961 66.667 0.00 0.00 42.91 3.71
1234 1242 1.202486 TCGTCGACAACCTCTTGCTTT 60.202 47.619 17.16 0.00 0.00 3.51
1456 1464 4.335647 ACCGCCTCACCAAGCTGG 62.336 66.667 0.00 0.00 45.02 4.85
1514 1522 2.125350 CCTCTTCGCCTGGCTCAC 60.125 66.667 17.92 0.00 0.00 3.51
1516 1524 1.739562 CTCTTCGCCTGGCTCACAC 60.740 63.158 17.92 0.00 0.00 3.82
1617 1625 0.322816 TTGAGGCAGGCACCATCTTC 60.323 55.000 0.00 0.00 0.00 2.87
1680 1688 2.047179 GTCCAGTTCCGTGGCCTC 60.047 66.667 3.32 0.00 37.53 4.70
1703 1711 0.601558 GCCTTCTCTGTCACCGTACA 59.398 55.000 0.00 0.00 0.00 2.90
1732 1740 2.295885 CTGATCTTGTCCAAGCATCCC 58.704 52.381 2.09 0.00 38.28 3.85
1796 1804 3.878160 TGTTTTTCAACAGGACCCAAC 57.122 42.857 0.00 0.00 38.03 3.77
1828 1836 5.279206 CCACCGATGCTATGTAGATTTCTCT 60.279 44.000 0.00 0.00 35.39 3.10
1890 1898 4.258543 TCCGTGATATGGTTTGTTCCTTC 58.741 43.478 0.00 0.00 0.00 3.46
1891 1899 3.377172 CCGTGATATGGTTTGTTCCTTCC 59.623 47.826 0.00 0.00 0.00 3.46
1892 1900 4.261801 CGTGATATGGTTTGTTCCTTCCT 58.738 43.478 0.00 0.00 0.00 3.36
1926 1934 7.871973 TGTGCTTGCTTCATTTGTATGTAATTT 59.128 29.630 0.00 0.00 33.34 1.82
1933 1941 8.745837 GCTTCATTTGTATGTAATTTCCATTCG 58.254 33.333 0.00 0.00 33.34 3.34
2055 2063 2.817258 CCTGCCGAGTACCAATTTCAAA 59.183 45.455 0.00 0.00 0.00 2.69
2057 2065 4.638421 CCTGCCGAGTACCAATTTCAAATA 59.362 41.667 0.00 0.00 0.00 1.40
2062 2070 6.405397 GCCGAGTACCAATTTCAAATAATGGT 60.405 38.462 10.68 10.68 0.00 3.55
2096 2104 5.790096 TGATAAATCTGCCCCATGTCCTATA 59.210 40.000 0.00 0.00 0.00 1.31
2124 2132 2.389059 CGATACTTGATGAGGAGCACG 58.611 52.381 0.00 0.00 0.00 5.34
2217 2225 3.991773 GACGTTGTGTAGTTTCCTGCATA 59.008 43.478 0.00 0.00 35.67 3.14
2336 2348 2.292103 TTTGTTTTGCTCCTGTGTGC 57.708 45.000 0.00 0.00 0.00 4.57
2365 2377 2.279582 ACGTTCCATCTAGTTCAGCG 57.720 50.000 0.00 0.00 0.00 5.18
2411 2423 1.077169 TGACCTCCAGTCTCAGCCTAA 59.923 52.381 0.00 0.00 46.46 2.69
2480 2492 3.935828 TCGACAAGTTGACAATGTTGTGA 59.064 39.130 18.53 14.11 42.43 3.58
2553 2565 9.018582 CAAAGTCAGGAAAAATTAGAATCCTCT 57.981 33.333 0.00 0.00 40.29 3.69
2683 2695 0.035247 TTACGCATTTTACCCGCCCT 60.035 50.000 0.00 0.00 0.00 5.19
2684 2696 0.829333 TACGCATTTTACCCGCCCTA 59.171 50.000 0.00 0.00 0.00 3.53
2687 2699 1.452953 GCATTTTACCCGCCCTAGCC 61.453 60.000 0.00 0.00 34.57 3.93
2728 2743 3.256960 TTGTGGCCTGGAGGTCCC 61.257 66.667 3.32 0.00 39.61 4.46
2731 2746 4.649705 TGGCCTGGAGGTCCCGAA 62.650 66.667 3.32 0.00 39.61 4.30
2849 2869 1.473677 ACGCCCTTTTATTTTACCCGC 59.526 47.619 0.00 0.00 0.00 6.13
2941 2962 2.806945 TCCCCATGTGACTCCATTTC 57.193 50.000 0.00 0.00 0.00 2.17
2971 2992 1.423541 ACAAACCAGACACATGCCCTA 59.576 47.619 0.00 0.00 0.00 3.53
3035 3056 3.120451 GCTTAATGAGCGCTCGATAGTTC 59.880 47.826 30.75 14.02 42.46 3.01
3036 3057 1.759994 AATGAGCGCTCGATAGTTCG 58.240 50.000 30.75 0.00 46.87 3.95
3045 3066 2.350580 GCTCGATAGTTCGGCTCGTTAT 60.351 50.000 0.00 0.00 45.53 1.89
3089 3110 6.349243 TGAACAGAGCCAATCATTGATTTT 57.651 33.333 9.19 0.07 28.87 1.82
3095 3116 5.008415 AGAGCCAATCATTGATTTTAGCTCG 59.992 40.000 28.62 13.11 43.80 5.03
3096 3117 4.641989 AGCCAATCATTGATTTTAGCTCGT 59.358 37.500 16.83 3.06 29.88 4.18
3170 3195 6.291743 CGTTAAGCTCGTTAGTAACAACACAA 60.292 38.462 13.33 0.00 0.00 3.33
3171 3196 5.399604 AAGCTCGTTAGTAACAACACAAC 57.600 39.130 13.33 0.00 0.00 3.32
3193 3218 8.946085 ACAACACATATTTTCATCTTACGTGAT 58.054 29.630 0.00 0.00 0.00 3.06
3214 3239 7.078228 GTGATAAACTTTTTGTAGCACCTCAG 58.922 38.462 0.00 0.00 0.00 3.35
3216 3241 2.230660 ACTTTTTGTAGCACCTCAGCC 58.769 47.619 0.00 0.00 34.23 4.85
3225 3250 1.849039 AGCACCTCAGCCCATCTATTT 59.151 47.619 0.00 0.00 34.23 1.40
3309 3334 7.402054 TCATCTTGAAAACCATACCTACACAT 58.598 34.615 0.00 0.00 0.00 3.21
3320 3345 7.977818 ACCATACCTACACATTCATCATGTAT 58.022 34.615 0.00 0.00 45.06 2.29
3348 3373 9.508642 TCACAACACATTATAATCTGTTAACCA 57.491 29.630 15.92 2.33 28.48 3.67
3377 3402 1.678269 CGAGCTTCAAACGAGCCGAG 61.678 60.000 1.50 0.00 41.03 4.63
3423 3448 6.507614 GTTAATCTTAACGAGCTTAACGAGCC 60.508 42.308 0.00 0.00 41.54 4.70
3424 3449 9.527903 GTTAATCTTAACGAGCTTAACGAGCCG 62.528 44.444 0.00 0.00 44.94 5.52
3437 3462 1.511768 GAGCCGAGCCTTAACGAGT 59.488 57.895 0.00 0.00 0.00 4.18
3440 3465 0.864797 GCCGAGCCTTAACGAGTACG 60.865 60.000 0.00 0.00 45.75 3.67
3453 3478 4.376274 ACGAGTACGAGCTTAACGAGCC 62.376 54.545 0.00 0.00 46.68 4.70
3472 3497 3.037485 GAGCTGCTCGTTAGTCCAC 57.963 57.895 14.68 0.00 0.00 4.02
3481 3506 2.889678 CTCGTTAGTCCACCCCTATACC 59.110 54.545 0.00 0.00 0.00 2.73
3488 3528 1.119574 CCACCCCTATACCTGTCCCG 61.120 65.000 0.00 0.00 0.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.138761 CGCATGATCAGCCTTAAAAATAGTC 58.861 40.000 0.09 0.00 0.00 2.59
1 2 5.009010 CCGCATGATCAGCCTTAAAAATAGT 59.991 40.000 0.09 0.00 0.00 2.12
2 3 5.455392 CCGCATGATCAGCCTTAAAAATAG 58.545 41.667 0.09 0.00 0.00 1.73
3 4 4.261572 GCCGCATGATCAGCCTTAAAAATA 60.262 41.667 0.09 0.00 0.00 1.40
4 5 3.491447 GCCGCATGATCAGCCTTAAAAAT 60.491 43.478 0.09 0.00 0.00 1.82
5 6 2.159254 GCCGCATGATCAGCCTTAAAAA 60.159 45.455 0.09 0.00 0.00 1.94
6 7 1.405105 GCCGCATGATCAGCCTTAAAA 59.595 47.619 0.09 0.00 0.00 1.52
7 8 1.024271 GCCGCATGATCAGCCTTAAA 58.976 50.000 0.09 0.00 0.00 1.52
8 9 0.181114 AGCCGCATGATCAGCCTTAA 59.819 50.000 0.09 0.00 0.00 1.85
9 10 0.533531 CAGCCGCATGATCAGCCTTA 60.534 55.000 0.09 0.00 0.00 2.69
10 11 1.822613 CAGCCGCATGATCAGCCTT 60.823 57.895 0.09 0.00 0.00 4.35
11 12 2.203167 CAGCCGCATGATCAGCCT 60.203 61.111 0.09 0.00 0.00 4.58
12 13 3.962421 GCAGCCGCATGATCAGCC 61.962 66.667 0.09 0.00 38.36 4.85
13 14 4.309347 CGCAGCCGCATGATCAGC 62.309 66.667 0.09 4.36 38.40 4.26
14 15 3.646976 CCGCAGCCGCATGATCAG 61.647 66.667 0.09 0.00 38.40 2.90
25 26 2.125952 GTTGGATTTGGCCGCAGC 60.126 61.111 0.00 0.00 38.76 5.25
26 27 1.814772 TTGGTTGGATTTGGCCGCAG 61.815 55.000 0.00 0.00 0.00 5.18
27 28 1.402896 TTTGGTTGGATTTGGCCGCA 61.403 50.000 0.00 0.00 0.00 5.69
28 29 0.036483 ATTTGGTTGGATTTGGCCGC 60.036 50.000 0.00 0.00 0.00 6.53
29 30 1.675415 CCATTTGGTTGGATTTGGCCG 60.675 52.381 0.00 0.00 39.25 6.13
30 31 1.339920 CCCATTTGGTTGGATTTGGCC 60.340 52.381 0.00 0.00 39.25 5.36
31 32 2.112380 CCCATTTGGTTGGATTTGGC 57.888 50.000 0.00 0.00 39.25 4.52
42 43 1.339631 TGCTAAGACCGACCCATTTGG 60.340 52.381 0.00 0.00 41.37 3.28
43 44 1.737793 GTGCTAAGACCGACCCATTTG 59.262 52.381 0.00 0.00 0.00 2.32
44 45 1.674817 CGTGCTAAGACCGACCCATTT 60.675 52.381 0.00 0.00 0.00 2.32
45 46 0.108329 CGTGCTAAGACCGACCCATT 60.108 55.000 0.00 0.00 0.00 3.16
46 47 1.515954 CGTGCTAAGACCGACCCAT 59.484 57.895 0.00 0.00 0.00 4.00
47 48 2.967397 CGTGCTAAGACCGACCCA 59.033 61.111 0.00 0.00 0.00 4.51
48 49 2.508663 GCGTGCTAAGACCGACCC 60.509 66.667 0.00 0.00 0.00 4.46
49 50 2.508663 GGCGTGCTAAGACCGACC 60.509 66.667 0.00 0.00 0.00 4.79
52 53 2.879462 GTCGGCGTGCTAAGACCG 60.879 66.667 6.85 0.00 46.97 4.79
53 54 2.508663 GGTCGGCGTGCTAAGACC 60.509 66.667 6.85 14.87 45.07 3.85
54 55 0.248539 CTAGGTCGGCGTGCTAAGAC 60.249 60.000 6.85 0.00 0.00 3.01
55 56 0.679002 ACTAGGTCGGCGTGCTAAGA 60.679 55.000 6.85 0.00 0.00 2.10
56 57 1.002684 CTACTAGGTCGGCGTGCTAAG 60.003 57.143 6.85 2.16 0.00 2.18
57 58 1.019673 CTACTAGGTCGGCGTGCTAA 58.980 55.000 6.85 0.00 0.00 3.09
58 59 1.442526 GCTACTAGGTCGGCGTGCTA 61.443 60.000 6.85 0.00 0.00 3.49
59 60 2.772691 GCTACTAGGTCGGCGTGCT 61.773 63.158 6.85 0.00 0.00 4.40
60 61 2.278661 GCTACTAGGTCGGCGTGC 60.279 66.667 6.85 0.68 0.00 5.34
61 62 0.949397 TATGCTACTAGGTCGGCGTG 59.051 55.000 6.85 0.00 0.00 5.34
62 63 1.906990 ATATGCTACTAGGTCGGCGT 58.093 50.000 6.85 0.00 0.00 5.68
63 64 3.299340 AAATATGCTACTAGGTCGGCG 57.701 47.619 0.00 0.00 0.00 6.46
74 75 9.529325 GCACGACCTGATTATATAAATATGCTA 57.471 33.333 0.00 0.00 0.00 3.49
75 76 8.260818 AGCACGACCTGATTATATAAATATGCT 58.739 33.333 0.00 4.42 0.00 3.79
76 77 8.331022 CAGCACGACCTGATTATATAAATATGC 58.669 37.037 0.00 2.42 34.77 3.14
77 78 8.820933 CCAGCACGACCTGATTATATAAATATG 58.179 37.037 0.00 0.00 34.77 1.78
78 79 7.495934 GCCAGCACGACCTGATTATATAAATAT 59.504 37.037 0.00 0.00 34.77 1.28
79 80 6.816640 GCCAGCACGACCTGATTATATAAATA 59.183 38.462 0.00 0.00 34.77 1.40
80 81 5.643777 GCCAGCACGACCTGATTATATAAAT 59.356 40.000 0.00 0.00 34.77 1.40
81 82 4.994852 GCCAGCACGACCTGATTATATAAA 59.005 41.667 0.00 0.00 34.77 1.40
82 83 4.039852 TGCCAGCACGACCTGATTATATAA 59.960 41.667 0.00 0.00 34.77 0.98
83 84 3.576550 TGCCAGCACGACCTGATTATATA 59.423 43.478 8.31 0.00 34.77 0.86
84 85 2.368548 TGCCAGCACGACCTGATTATAT 59.631 45.455 8.31 0.00 34.77 0.86
85 86 1.760029 TGCCAGCACGACCTGATTATA 59.240 47.619 8.31 0.00 34.77 0.98
86 87 0.541392 TGCCAGCACGACCTGATTAT 59.459 50.000 8.31 0.00 34.77 1.28
87 88 0.541392 ATGCCAGCACGACCTGATTA 59.459 50.000 0.00 0.00 34.77 1.75
88 89 1.028330 CATGCCAGCACGACCTGATT 61.028 55.000 0.00 0.00 34.77 2.57
89 90 1.450848 CATGCCAGCACGACCTGAT 60.451 57.895 0.00 0.00 34.77 2.90
90 91 2.046988 CATGCCAGCACGACCTGA 60.047 61.111 0.00 0.00 34.77 3.86
91 92 2.359107 ACATGCCAGCACGACCTG 60.359 61.111 0.00 0.00 0.00 4.00
92 93 2.359107 CACATGCCAGCACGACCT 60.359 61.111 0.00 0.00 0.00 3.85
93 94 2.358615 TCACATGCCAGCACGACC 60.359 61.111 0.00 0.00 0.00 4.79
94 95 2.680913 GGTCACATGCCAGCACGAC 61.681 63.158 0.00 2.39 0.00 4.34
95 96 2.358615 GGTCACATGCCAGCACGA 60.359 61.111 0.00 0.00 0.00 4.35
96 97 3.434319 GGGTCACATGCCAGCACG 61.434 66.667 0.00 0.00 0.00 5.34
97 98 1.660560 GATGGGTCACATGCCAGCAC 61.661 60.000 0.00 0.00 40.72 4.40
98 99 1.378911 GATGGGTCACATGCCAGCA 60.379 57.895 0.00 0.00 40.72 4.41
99 100 0.181114 TAGATGGGTCACATGCCAGC 59.819 55.000 0.00 0.00 40.72 4.85
100 101 1.202734 CCTAGATGGGTCACATGCCAG 60.203 57.143 0.00 0.00 40.72 4.85
101 102 0.839277 CCTAGATGGGTCACATGCCA 59.161 55.000 0.00 0.00 40.72 4.92
102 103 3.713902 CCTAGATGGGTCACATGCC 57.286 57.895 0.00 0.00 40.72 4.40
126 127 4.021925 AAGTCTCACGGCCCAGGC 62.022 66.667 0.00 0.00 41.06 4.85
127 128 2.046892 CAAGTCTCACGGCCCAGG 60.047 66.667 0.00 0.00 0.00 4.45
128 129 2.046892 CCAAGTCTCACGGCCCAG 60.047 66.667 0.00 0.00 0.00 4.45
129 130 4.329545 GCCAAGTCTCACGGCCCA 62.330 66.667 0.00 0.00 40.07 5.36
130 131 4.329545 TGCCAAGTCTCACGGCCC 62.330 66.667 0.00 0.00 45.63 5.80
131 132 3.050275 GTGCCAAGTCTCACGGCC 61.050 66.667 0.00 0.00 45.63 6.13
135 136 2.522060 CACTCGTGCCAAGTCTCAC 58.478 57.895 0.00 0.00 0.00 3.51
155 156 1.092921 TAAATGGTCGTGCGATGCCC 61.093 55.000 0.00 0.00 0.00 5.36
156 157 0.944386 ATAAATGGTCGTGCGATGCC 59.056 50.000 0.00 0.00 0.00 4.40
157 158 2.755836 AATAAATGGTCGTGCGATGC 57.244 45.000 0.00 0.00 0.00 3.91
158 159 7.678194 AAAATAAATAAATGGTCGTGCGATG 57.322 32.000 0.00 0.00 0.00 3.84
159 160 9.959749 ATAAAAATAAATAAATGGTCGTGCGAT 57.040 25.926 0.00 0.00 0.00 4.58
186 187 8.529476 CGACCTATATTAAGCCTATTAGGTTGT 58.471 37.037 11.38 0.00 37.80 3.32
187 188 8.746530 TCGACCTATATTAAGCCTATTAGGTTG 58.253 37.037 11.38 7.55 37.80 3.77
188 189 8.890410 TCGACCTATATTAAGCCTATTAGGTT 57.110 34.615 11.38 2.22 37.80 3.50
189 190 8.890410 TTCGACCTATATTAAGCCTATTAGGT 57.110 34.615 11.38 0.00 37.80 3.08
193 194 9.841295 TTGTTTTCGACCTATATTAAGCCTATT 57.159 29.630 0.00 0.00 0.00 1.73
194 195 9.269453 GTTGTTTTCGACCTATATTAAGCCTAT 57.731 33.333 0.00 0.00 0.00 2.57
195 196 8.652810 GTTGTTTTCGACCTATATTAAGCCTA 57.347 34.615 0.00 0.00 0.00 3.93
196 197 7.549615 GTTGTTTTCGACCTATATTAAGCCT 57.450 36.000 0.00 0.00 0.00 4.58
209 210 2.817844 AGCCTATTGGGTTGTTTTCGAC 59.182 45.455 0.00 0.00 42.12 4.20
210 211 2.817258 CAGCCTATTGGGTTGTTTTCGA 59.183 45.455 0.00 0.00 43.07 3.71
211 212 2.817258 TCAGCCTATTGGGTTGTTTTCG 59.183 45.455 2.93 0.00 45.05 3.46
212 213 4.864704 TTCAGCCTATTGGGTTGTTTTC 57.135 40.909 2.93 0.00 45.05 2.29
213 214 5.543790 AGAATTCAGCCTATTGGGTTGTTTT 59.456 36.000 8.44 0.00 45.05 2.43
214 215 5.047092 CAGAATTCAGCCTATTGGGTTGTTT 60.047 40.000 8.44 0.00 45.05 2.83
215 216 4.463891 CAGAATTCAGCCTATTGGGTTGTT 59.536 41.667 8.44 0.00 45.05 2.83
216 217 4.019174 CAGAATTCAGCCTATTGGGTTGT 58.981 43.478 8.44 0.00 45.05 3.32
217 218 4.019174 ACAGAATTCAGCCTATTGGGTTG 58.981 43.478 8.44 0.00 45.98 3.77
218 219 4.019174 CACAGAATTCAGCCTATTGGGTT 58.981 43.478 8.44 0.00 43.07 4.11
219 220 3.624777 CACAGAATTCAGCCTATTGGGT 58.375 45.455 8.44 0.00 46.37 4.51
220 221 2.360165 GCACAGAATTCAGCCTATTGGG 59.640 50.000 8.44 0.00 38.36 4.12
221 222 2.032550 CGCACAGAATTCAGCCTATTGG 59.967 50.000 8.44 0.00 0.00 3.16
222 223 2.032550 CCGCACAGAATTCAGCCTATTG 59.967 50.000 8.44 0.00 0.00 1.90
223 224 2.292267 CCGCACAGAATTCAGCCTATT 58.708 47.619 8.44 0.00 0.00 1.73
224 225 1.475751 CCCGCACAGAATTCAGCCTAT 60.476 52.381 8.44 0.00 0.00 2.57
225 226 0.107703 CCCGCACAGAATTCAGCCTA 60.108 55.000 8.44 0.00 0.00 3.93
226 227 1.377725 CCCGCACAGAATTCAGCCT 60.378 57.895 8.44 0.00 0.00 4.58
227 228 3.056313 GCCCGCACAGAATTCAGCC 62.056 63.158 8.44 0.00 0.00 4.85
228 229 2.042831 AGCCCGCACAGAATTCAGC 61.043 57.895 8.44 7.77 0.00 4.26
229 230 1.651240 CCAGCCCGCACAGAATTCAG 61.651 60.000 8.44 1.65 0.00 3.02
230 231 1.675310 CCAGCCCGCACAGAATTCA 60.675 57.895 8.44 0.00 0.00 2.57
231 232 3.056313 GCCAGCCCGCACAGAATTC 62.056 63.158 0.00 0.00 0.00 2.17
232 233 3.064324 GCCAGCCCGCACAGAATT 61.064 61.111 0.00 0.00 0.00 2.17
265 266 2.031919 TTACACAGGCTGGCACGG 59.968 61.111 20.34 5.22 38.10 4.94
266 267 0.955428 ATGTTACACAGGCTGGCACG 60.955 55.000 20.34 6.70 0.00 5.34
267 268 2.009774 CTATGTTACACAGGCTGGCAC 58.990 52.381 20.34 9.76 0.00 5.01
268 269 1.065491 CCTATGTTACACAGGCTGGCA 60.065 52.381 20.34 9.61 0.00 4.92
269 270 1.668419 CCTATGTTACACAGGCTGGC 58.332 55.000 20.34 4.07 0.00 4.85
270 271 1.134098 CCCCTATGTTACACAGGCTGG 60.134 57.143 20.34 10.34 0.00 4.85
271 272 1.747206 GCCCCTATGTTACACAGGCTG 60.747 57.143 14.16 14.16 34.16 4.85
272 273 0.546598 GCCCCTATGTTACACAGGCT 59.453 55.000 3.78 0.00 34.16 4.58
273 274 0.546598 AGCCCCTATGTTACACAGGC 59.453 55.000 3.78 6.43 36.36 4.85
274 275 1.559682 ACAGCCCCTATGTTACACAGG 59.440 52.381 2.09 2.09 0.00 4.00
275 276 2.632377 CACAGCCCCTATGTTACACAG 58.368 52.381 0.00 0.00 0.00 3.66
276 277 1.339631 GCACAGCCCCTATGTTACACA 60.340 52.381 0.00 0.00 0.00 3.72
277 278 1.379527 GCACAGCCCCTATGTTACAC 58.620 55.000 0.00 0.00 0.00 2.90
278 279 0.254747 GGCACAGCCCCTATGTTACA 59.745 55.000 0.00 0.00 44.06 2.41
279 280 3.095922 GGCACAGCCCCTATGTTAC 57.904 57.895 0.00 0.00 44.06 2.50
304 305 4.052518 ACACATGCTGCCCTCCCC 62.053 66.667 0.00 0.00 0.00 4.81
305 306 2.753043 CACACATGCTGCCCTCCC 60.753 66.667 0.00 0.00 0.00 4.30
315 316 3.434319 GTCGGGCTGGCACACATG 61.434 66.667 2.88 0.00 0.00 3.21
316 317 3.952508 TGTCGGGCTGGCACACAT 61.953 61.111 0.00 0.00 0.00 3.21
317 318 4.927782 GTGTCGGGCTGGCACACA 62.928 66.667 25.40 3.68 40.22 3.72
329 330 2.433664 GGTACAAGGCCCGTGTCG 60.434 66.667 12.79 0.00 0.00 4.35
330 331 1.375523 CAGGTACAAGGCCCGTGTC 60.376 63.158 12.79 5.71 0.00 3.67
331 332 2.747686 CAGGTACAAGGCCCGTGT 59.252 61.111 13.82 13.82 0.00 4.49
332 333 2.746277 GCAGGTACAAGGCCCGTG 60.746 66.667 0.00 0.00 0.00 4.94
333 334 2.928396 AGCAGGTACAAGGCCCGT 60.928 61.111 0.00 0.00 0.00 5.28
334 335 2.436646 CAGCAGGTACAAGGCCCG 60.437 66.667 0.00 0.00 0.00 6.13
335 336 1.675641 CACAGCAGGTACAAGGCCC 60.676 63.158 0.00 0.00 0.00 5.80
336 337 2.335712 GCACAGCAGGTACAAGGCC 61.336 63.158 0.00 0.00 0.00 5.19
337 338 2.335712 GGCACAGCAGGTACAAGGC 61.336 63.158 0.00 0.00 0.00 4.35
338 339 1.675641 GGGCACAGCAGGTACAAGG 60.676 63.158 0.00 0.00 0.00 3.61
339 340 0.957395 CTGGGCACAGCAGGTACAAG 60.957 60.000 1.22 0.00 38.01 3.16
340 341 1.073025 CTGGGCACAGCAGGTACAA 59.927 57.895 1.22 0.00 38.01 2.41
341 342 2.749682 CTGGGCACAGCAGGTACA 59.250 61.111 1.22 0.00 38.01 2.90
355 356 4.320456 ACTGCACGGACTGGCTGG 62.320 66.667 0.00 0.00 33.82 4.85
356 357 3.046087 CACTGCACGGACTGGCTG 61.046 66.667 0.00 0.00 35.41 4.85
357 358 2.608970 AAACACTGCACGGACTGGCT 62.609 55.000 0.00 0.00 0.00 4.75
358 359 2.186826 AAACACTGCACGGACTGGC 61.187 57.895 0.00 0.00 0.00 4.85
359 360 1.648720 CAAACACTGCACGGACTGG 59.351 57.895 0.00 0.00 0.00 4.00
360 361 1.648720 CCAAACACTGCACGGACTG 59.351 57.895 0.00 0.00 0.00 3.51
361 362 2.186826 GCCAAACACTGCACGGACT 61.187 57.895 0.00 0.00 0.00 3.85
362 363 2.331451 GCCAAACACTGCACGGAC 59.669 61.111 0.00 0.00 0.00 4.79
363 364 2.124529 TGCCAAACACTGCACGGA 60.125 55.556 0.00 0.00 31.31 4.69
369 370 7.334421 AACTAGAGTTATATGTGCCAAACACTG 59.666 37.037 0.00 0.00 42.40 3.66
370 371 7.334421 CAACTAGAGTTATATGTGCCAAACACT 59.666 37.037 0.00 0.00 42.40 3.55
371 372 7.119262 ACAACTAGAGTTATATGTGCCAAACAC 59.881 37.037 0.00 0.00 42.31 3.32
372 373 7.119116 CACAACTAGAGTTATATGTGCCAAACA 59.881 37.037 0.00 0.00 38.82 2.83
373 374 7.119262 ACACAACTAGAGTTATATGTGCCAAAC 59.881 37.037 10.67 0.00 36.32 2.93
374 375 7.165485 ACACAACTAGAGTTATATGTGCCAAA 58.835 34.615 10.67 0.00 36.32 3.28
375 376 6.707290 ACACAACTAGAGTTATATGTGCCAA 58.293 36.000 10.67 0.00 36.32 4.52
376 377 6.294361 ACACAACTAGAGTTATATGTGCCA 57.706 37.500 10.67 0.00 36.32 4.92
377 378 5.459107 CGACACAACTAGAGTTATATGTGCC 59.541 44.000 10.67 1.74 36.32 5.01
378 379 6.020599 CACGACACAACTAGAGTTATATGTGC 60.021 42.308 10.67 5.11 36.32 4.57
379 380 6.020599 GCACGACACAACTAGAGTTATATGTG 60.021 42.308 9.60 9.60 36.32 3.21
380 381 6.034591 GCACGACACAACTAGAGTTATATGT 58.965 40.000 0.00 0.87 36.32 2.29
381 382 5.459107 GGCACGACACAACTAGAGTTATATG 59.541 44.000 0.00 0.00 36.32 1.78
382 383 5.589192 GGCACGACACAACTAGAGTTATAT 58.411 41.667 0.00 0.00 36.32 0.86
383 384 4.990257 GGCACGACACAACTAGAGTTATA 58.010 43.478 0.00 0.00 36.32 0.98
384 385 3.846360 GGCACGACACAACTAGAGTTAT 58.154 45.455 0.00 0.00 36.32 1.89
385 386 3.293311 GGCACGACACAACTAGAGTTA 57.707 47.619 0.00 0.00 36.32 2.24
386 387 2.150397 GGCACGACACAACTAGAGTT 57.850 50.000 0.00 0.00 39.12 3.01
387 388 3.888093 GGCACGACACAACTAGAGT 57.112 52.632 0.00 0.00 0.00 3.24
407 408 0.395724 CCTAGCCAAATGGGTCACCC 60.396 60.000 5.63 5.63 46.04 4.61
408 409 1.037579 GCCTAGCCAAATGGGTCACC 61.038 60.000 7.54 0.00 46.04 4.02
409 410 2.493547 GCCTAGCCAAATGGGTCAC 58.506 57.895 7.54 0.00 46.04 3.67
435 436 4.143333 ATTCGGTCAGTCGCCCCG 62.143 66.667 0.00 0.00 43.03 5.73
436 437 2.202892 GATTCGGTCAGTCGCCCC 60.203 66.667 0.00 0.00 0.00 5.80
437 438 1.519455 CAGATTCGGTCAGTCGCCC 60.519 63.158 0.00 0.00 0.00 6.13
438 439 0.802607 GACAGATTCGGTCAGTCGCC 60.803 60.000 11.44 0.00 34.30 5.54
439 440 0.802607 GGACAGATTCGGTCAGTCGC 60.803 60.000 16.96 0.00 42.48 5.19
440 441 0.179134 GGGACAGATTCGGTCAGTCG 60.179 60.000 16.96 0.00 42.48 4.18
441 442 1.187087 AGGGACAGATTCGGTCAGTC 58.813 55.000 16.96 7.42 41.27 3.51
442 443 2.526888 TAGGGACAGATTCGGTCAGT 57.473 50.000 16.96 7.23 37.00 3.41
443 444 3.551046 CGATTAGGGACAGATTCGGTCAG 60.551 52.174 16.96 0.00 37.00 3.51
444 445 2.361119 CGATTAGGGACAGATTCGGTCA 59.639 50.000 16.96 0.00 37.00 4.02
445 446 2.862921 GCGATTAGGGACAGATTCGGTC 60.863 54.545 8.26 8.26 34.52 4.79
446 447 1.068741 GCGATTAGGGACAGATTCGGT 59.931 52.381 0.00 0.00 0.00 4.69
447 448 1.605712 GGCGATTAGGGACAGATTCGG 60.606 57.143 0.00 0.00 0.00 4.30
448 449 1.605712 GGGCGATTAGGGACAGATTCG 60.606 57.143 0.00 0.00 0.00 3.34
449 450 1.694696 AGGGCGATTAGGGACAGATTC 59.305 52.381 0.00 0.00 0.00 2.52
450 451 1.807814 AGGGCGATTAGGGACAGATT 58.192 50.000 0.00 0.00 0.00 2.40
451 452 2.696526 TAGGGCGATTAGGGACAGAT 57.303 50.000 0.00 0.00 0.00 2.90
452 453 2.464796 TTAGGGCGATTAGGGACAGA 57.535 50.000 0.00 0.00 0.00 3.41
453 454 2.352814 CGATTAGGGCGATTAGGGACAG 60.353 54.545 0.00 0.00 0.00 3.51
454 455 1.616865 CGATTAGGGCGATTAGGGACA 59.383 52.381 0.00 0.00 0.00 4.02
455 456 1.617357 ACGATTAGGGCGATTAGGGAC 59.383 52.381 0.00 0.00 0.00 4.46
456 457 2.005370 ACGATTAGGGCGATTAGGGA 57.995 50.000 0.00 0.00 0.00 4.20
457 458 2.165845 CCTACGATTAGGGCGATTAGGG 59.834 54.545 0.00 0.00 41.41 3.53
458 459 3.505464 CCTACGATTAGGGCGATTAGG 57.495 52.381 0.00 0.00 41.41 2.69
467 468 4.632153 CCAAGATCAACCCTACGATTAGG 58.368 47.826 0.00 0.00 44.43 2.69
468 469 4.058817 GCCAAGATCAACCCTACGATTAG 58.941 47.826 0.00 0.00 0.00 1.73
469 470 3.181458 GGCCAAGATCAACCCTACGATTA 60.181 47.826 0.00 0.00 0.00 1.75
470 471 2.421529 GGCCAAGATCAACCCTACGATT 60.422 50.000 0.00 0.00 0.00 3.34
471 472 1.141053 GGCCAAGATCAACCCTACGAT 59.859 52.381 0.00 0.00 0.00 3.73
472 473 0.539986 GGCCAAGATCAACCCTACGA 59.460 55.000 0.00 0.00 0.00 3.43
473 474 0.251916 TGGCCAAGATCAACCCTACG 59.748 55.000 0.61 0.00 0.00 3.51
474 475 2.507407 TTGGCCAAGATCAACCCTAC 57.493 50.000 16.05 0.00 0.00 3.18
475 476 2.311542 ACATTGGCCAAGATCAACCCTA 59.688 45.455 24.94 0.00 0.00 3.53
476 477 1.077663 ACATTGGCCAAGATCAACCCT 59.922 47.619 24.94 0.00 0.00 4.34
477 478 1.478105 GACATTGGCCAAGATCAACCC 59.522 52.381 24.94 3.26 0.00 4.11
478 479 2.165030 CAGACATTGGCCAAGATCAACC 59.835 50.000 24.94 8.30 0.00 3.77
479 480 2.821969 ACAGACATTGGCCAAGATCAAC 59.178 45.455 24.94 11.33 0.00 3.18
480 481 3.159213 ACAGACATTGGCCAAGATCAA 57.841 42.857 24.94 0.00 0.00 2.57
481 482 2.885135 ACAGACATTGGCCAAGATCA 57.115 45.000 24.94 0.00 0.00 2.92
482 483 4.265073 ACTAACAGACATTGGCCAAGATC 58.735 43.478 24.94 21.85 0.00 2.75
483 484 4.307032 ACTAACAGACATTGGCCAAGAT 57.693 40.909 24.94 14.31 0.00 2.40
484 485 3.788227 ACTAACAGACATTGGCCAAGA 57.212 42.857 24.94 0.78 0.00 3.02
485 486 3.820467 TCAACTAACAGACATTGGCCAAG 59.180 43.478 24.94 17.48 0.00 3.61
486 487 3.826524 TCAACTAACAGACATTGGCCAA 58.173 40.909 23.00 23.00 0.00 4.52
487 488 3.500448 TCAACTAACAGACATTGGCCA 57.500 42.857 0.00 0.00 0.00 5.36
488 489 4.072131 TCTTCAACTAACAGACATTGGCC 58.928 43.478 0.00 0.00 0.00 5.36
489 490 4.377431 CGTCTTCAACTAACAGACATTGGC 60.377 45.833 0.00 0.00 37.40 4.52
490 491 4.377431 GCGTCTTCAACTAACAGACATTGG 60.377 45.833 0.00 0.00 37.40 3.16
491 492 4.211164 TGCGTCTTCAACTAACAGACATTG 59.789 41.667 0.00 0.00 37.40 2.82
492 493 4.377021 TGCGTCTTCAACTAACAGACATT 58.623 39.130 0.00 0.00 37.40 2.71
493 494 3.990092 TGCGTCTTCAACTAACAGACAT 58.010 40.909 0.00 0.00 37.40 3.06
494 495 3.446310 TGCGTCTTCAACTAACAGACA 57.554 42.857 0.00 0.00 37.40 3.41
495 496 4.921515 TGTATGCGTCTTCAACTAACAGAC 59.078 41.667 0.00 0.00 34.68 3.51
496 497 4.921515 GTGTATGCGTCTTCAACTAACAGA 59.078 41.667 0.00 0.00 0.00 3.41
497 498 4.091509 GGTGTATGCGTCTTCAACTAACAG 59.908 45.833 0.00 0.00 0.00 3.16
498 499 3.991773 GGTGTATGCGTCTTCAACTAACA 59.008 43.478 0.00 0.00 0.00 2.41
499 500 4.243270 AGGTGTATGCGTCTTCAACTAAC 58.757 43.478 0.00 0.00 0.00 2.34
500 501 4.530710 AGGTGTATGCGTCTTCAACTAA 57.469 40.909 0.00 0.00 0.00 2.24
501 502 4.242475 CAAGGTGTATGCGTCTTCAACTA 58.758 43.478 0.00 0.00 0.00 2.24
502 503 3.067106 CAAGGTGTATGCGTCTTCAACT 58.933 45.455 0.00 0.00 0.00 3.16
503 504 2.159627 CCAAGGTGTATGCGTCTTCAAC 59.840 50.000 0.00 0.00 0.00 3.18
504 505 2.422597 CCAAGGTGTATGCGTCTTCAA 58.577 47.619 0.00 0.00 0.00 2.69
505 506 1.338674 CCCAAGGTGTATGCGTCTTCA 60.339 52.381 0.00 0.00 0.00 3.02
506 507 1.369625 CCCAAGGTGTATGCGTCTTC 58.630 55.000 0.00 0.00 0.00 2.87
507 508 0.035439 CCCCAAGGTGTATGCGTCTT 60.035 55.000 0.00 0.00 0.00 3.01
508 509 1.602237 CCCCAAGGTGTATGCGTCT 59.398 57.895 0.00 0.00 0.00 4.18
509 510 4.218722 CCCCAAGGTGTATGCGTC 57.781 61.111 0.00 0.00 0.00 5.19
519 520 1.120795 ACCAAATGCACACCCCAAGG 61.121 55.000 0.00 0.00 40.04 3.61
520 521 0.758123 AACCAAATGCACACCCCAAG 59.242 50.000 0.00 0.00 0.00 3.61
521 522 1.207791 AAACCAAATGCACACCCCAA 58.792 45.000 0.00 0.00 0.00 4.12
522 523 1.207791 AAAACCAAATGCACACCCCA 58.792 45.000 0.00 0.00 0.00 4.96
523 524 2.340210 AAAAACCAAATGCACACCCC 57.660 45.000 0.00 0.00 0.00 4.95
539 540 4.113354 CCAAACCGATTCAAACCGAAAAA 58.887 39.130 0.00 0.00 37.12 1.94
540 541 3.130693 ACCAAACCGATTCAAACCGAAAA 59.869 39.130 0.00 0.00 37.12 2.29
541 542 2.688958 ACCAAACCGATTCAAACCGAAA 59.311 40.909 0.00 0.00 37.12 3.46
542 543 2.299521 ACCAAACCGATTCAAACCGAA 58.700 42.857 0.00 0.00 38.22 4.30
543 544 1.970092 ACCAAACCGATTCAAACCGA 58.030 45.000 0.00 0.00 0.00 4.69
544 545 2.785713 AACCAAACCGATTCAAACCG 57.214 45.000 0.00 0.00 0.00 4.44
545 546 6.679843 TGTATAAACCAAACCGATTCAAACC 58.320 36.000 0.00 0.00 0.00 3.27
546 547 7.364970 ACTGTATAAACCAAACCGATTCAAAC 58.635 34.615 0.00 0.00 0.00 2.93
547 548 7.513371 ACTGTATAAACCAAACCGATTCAAA 57.487 32.000 0.00 0.00 0.00 2.69
548 549 7.513371 AACTGTATAAACCAAACCGATTCAA 57.487 32.000 0.00 0.00 0.00 2.69
549 550 7.513371 AAACTGTATAAACCAAACCGATTCA 57.487 32.000 0.00 0.00 0.00 2.57
550 551 9.498307 CATAAACTGTATAAACCAAACCGATTC 57.502 33.333 0.00 0.00 0.00 2.52
551 552 8.463607 CCATAAACTGTATAAACCAAACCGATT 58.536 33.333 0.00 0.00 0.00 3.34
552 553 7.612633 ACCATAAACTGTATAAACCAAACCGAT 59.387 33.333 0.00 0.00 0.00 4.18
553 554 6.941436 ACCATAAACTGTATAAACCAAACCGA 59.059 34.615 0.00 0.00 0.00 4.69
554 555 7.148355 ACCATAAACTGTATAAACCAAACCG 57.852 36.000 0.00 0.00 0.00 4.44
626 627 9.908152 GTAAATGCTTATTACCAAAACTGAACT 57.092 29.630 0.00 0.00 0.00 3.01
627 628 9.908152 AGTAAATGCTTATTACCAAAACTGAAC 57.092 29.630 4.09 0.00 34.50 3.18
631 632 9.620660 CGAAAGTAAATGCTTATTACCAAAACT 57.379 29.630 4.09 0.00 34.50 2.66
632 633 8.856247 CCGAAAGTAAATGCTTATTACCAAAAC 58.144 33.333 0.00 0.00 34.50 2.43
633 634 8.578151 ACCGAAAGTAAATGCTTATTACCAAAA 58.422 29.630 0.00 0.00 34.50 2.44
634 635 8.113173 ACCGAAAGTAAATGCTTATTACCAAA 57.887 30.769 0.00 0.00 34.50 3.28
635 636 7.690952 ACCGAAAGTAAATGCTTATTACCAA 57.309 32.000 0.00 0.00 34.50 3.67
636 637 7.010367 CGTACCGAAAGTAAATGCTTATTACCA 59.990 37.037 0.00 0.00 34.50 3.25
637 638 7.010460 ACGTACCGAAAGTAAATGCTTATTACC 59.990 37.037 0.00 0.00 34.50 2.85
638 639 7.898946 ACGTACCGAAAGTAAATGCTTATTAC 58.101 34.615 0.00 0.00 34.24 1.89
639 640 8.382130 CAACGTACCGAAAGTAAATGCTTATTA 58.618 33.333 0.00 0.00 31.05 0.98
640 641 6.973229 ACGTACCGAAAGTAAATGCTTATT 57.027 33.333 0.00 0.00 31.05 1.40
641 642 6.183360 CCAACGTACCGAAAGTAAATGCTTAT 60.183 38.462 0.00 0.00 31.05 1.73
642 643 5.120519 CCAACGTACCGAAAGTAAATGCTTA 59.879 40.000 0.00 0.00 31.05 3.09
643 644 4.083696 CCAACGTACCGAAAGTAAATGCTT 60.084 41.667 0.00 0.00 31.05 3.91
644 645 3.434299 CCAACGTACCGAAAGTAAATGCT 59.566 43.478 0.00 0.00 31.05 3.79
645 646 3.432933 TCCAACGTACCGAAAGTAAATGC 59.567 43.478 0.00 0.00 31.05 3.56
646 647 5.789710 ATCCAACGTACCGAAAGTAAATG 57.210 39.130 0.00 0.00 31.05 2.32
647 648 6.036408 GCTTATCCAACGTACCGAAAGTAAAT 59.964 38.462 0.00 0.00 31.05 1.40
648 649 5.348451 GCTTATCCAACGTACCGAAAGTAAA 59.652 40.000 0.00 0.00 31.05 2.01
649 650 4.864247 GCTTATCCAACGTACCGAAAGTAA 59.136 41.667 0.00 0.00 31.05 2.24
650 651 4.082300 TGCTTATCCAACGTACCGAAAGTA 60.082 41.667 0.00 0.00 0.00 2.24
651 652 3.256558 GCTTATCCAACGTACCGAAAGT 58.743 45.455 0.00 0.00 0.00 2.66
652 653 3.255725 TGCTTATCCAACGTACCGAAAG 58.744 45.455 0.00 0.00 0.00 2.62
653 654 3.255725 CTGCTTATCCAACGTACCGAAA 58.744 45.455 0.00 0.00 0.00 3.46
654 655 2.231964 ACTGCTTATCCAACGTACCGAA 59.768 45.455 0.00 0.00 0.00 4.30
655 656 1.820519 ACTGCTTATCCAACGTACCGA 59.179 47.619 0.00 0.00 0.00 4.69
656 657 2.190981 GACTGCTTATCCAACGTACCG 58.809 52.381 0.00 0.00 0.00 4.02
657 658 3.241067 TGACTGCTTATCCAACGTACC 57.759 47.619 0.00 0.00 0.00 3.34
658 659 5.796350 AAATGACTGCTTATCCAACGTAC 57.204 39.130 0.00 0.00 0.00 3.67
659 660 5.123186 CCAAAATGACTGCTTATCCAACGTA 59.877 40.000 0.00 0.00 0.00 3.57
660 661 4.082787 CCAAAATGACTGCTTATCCAACGT 60.083 41.667 0.00 0.00 0.00 3.99
661 662 4.082787 ACCAAAATGACTGCTTATCCAACG 60.083 41.667 0.00 0.00 0.00 4.10
662 663 5.391312 ACCAAAATGACTGCTTATCCAAC 57.609 39.130 0.00 0.00 0.00 3.77
663 664 7.232534 AGTTAACCAAAATGACTGCTTATCCAA 59.767 33.333 0.88 0.00 0.00 3.53
664 665 6.719370 AGTTAACCAAAATGACTGCTTATCCA 59.281 34.615 0.88 0.00 0.00 3.41
665 666 7.158099 AGTTAACCAAAATGACTGCTTATCC 57.842 36.000 0.88 0.00 0.00 2.59
668 669 9.073475 ACAATAGTTAACCAAAATGACTGCTTA 57.927 29.630 0.88 0.00 0.00 3.09
669 670 7.951591 ACAATAGTTAACCAAAATGACTGCTT 58.048 30.769 0.88 0.00 0.00 3.91
670 671 7.524717 ACAATAGTTAACCAAAATGACTGCT 57.475 32.000 0.88 0.00 0.00 4.24
671 672 6.523201 CGACAATAGTTAACCAAAATGACTGC 59.477 38.462 0.88 0.00 0.00 4.40
672 673 6.523201 GCGACAATAGTTAACCAAAATGACTG 59.477 38.462 0.88 0.00 0.00 3.51
673 674 6.349033 GGCGACAATAGTTAACCAAAATGACT 60.349 38.462 0.88 0.00 0.00 3.41
674 675 5.798434 GGCGACAATAGTTAACCAAAATGAC 59.202 40.000 0.88 0.00 0.00 3.06
675 676 5.106078 GGGCGACAATAGTTAACCAAAATGA 60.106 40.000 0.88 0.00 0.00 2.57
676 677 5.099575 GGGCGACAATAGTTAACCAAAATG 58.900 41.667 0.88 0.00 0.00 2.32
677 678 4.767928 TGGGCGACAATAGTTAACCAAAAT 59.232 37.500 0.88 0.00 0.00 1.82
678 679 4.142790 TGGGCGACAATAGTTAACCAAAA 58.857 39.130 0.88 0.00 0.00 2.44
679 680 3.752665 TGGGCGACAATAGTTAACCAAA 58.247 40.909 0.88 0.00 0.00 3.28
680 681 3.420300 TGGGCGACAATAGTTAACCAA 57.580 42.857 0.88 0.00 0.00 3.67
681 682 3.637911 ATGGGCGACAATAGTTAACCA 57.362 42.857 0.88 0.00 0.00 3.67
682 683 4.025480 CGTAATGGGCGACAATAGTTAACC 60.025 45.833 0.88 0.00 0.00 2.85
683 684 4.551410 GCGTAATGGGCGACAATAGTTAAC 60.551 45.833 0.00 0.00 0.00 2.01
684 685 3.556775 GCGTAATGGGCGACAATAGTTAA 59.443 43.478 0.00 0.00 0.00 2.01
685 686 3.125316 GCGTAATGGGCGACAATAGTTA 58.875 45.455 0.00 0.00 0.00 2.24
686 687 1.937899 GCGTAATGGGCGACAATAGTT 59.062 47.619 0.00 0.00 0.00 2.24
687 688 1.138266 AGCGTAATGGGCGACAATAGT 59.862 47.619 0.00 0.00 35.00 2.12
724 725 6.599356 ACCGAATTAACCAAAATTAAGGCT 57.401 33.333 0.00 0.00 33.44 4.58
725 726 7.661127 AAACCGAATTAACCAAAATTAAGGC 57.339 32.000 0.00 0.00 33.44 4.35
752 753 7.555914 TCCGATTAGAAACCAATGATCATTTGA 59.444 33.333 22.58 4.80 0.00 2.69
761 762 6.944557 GGTTTTTCCGATTAGAAACCAATG 57.055 37.500 10.93 0.00 46.41 2.82
847 854 8.716909 TGAAGAAAACAAAAACTGATCCAAAAC 58.283 29.630 0.00 0.00 0.00 2.43
872 879 3.851098 TGGAACCGAAAACCAAAAACTG 58.149 40.909 0.00 0.00 0.00 3.16
910 917 5.975282 ACTTCTTTTCTCGAAGGGGTATAC 58.025 41.667 0.00 0.00 41.61 1.47
947 955 3.155501 AGATTACCCTAGATCCGTTCCG 58.844 50.000 0.00 0.00 0.00 4.30
1175 1183 0.758685 CCGCTCCTCCTCATCTTCCT 60.759 60.000 0.00 0.00 0.00 3.36
1327 1335 2.464459 CGGCGCAGATGGAAGAACC 61.464 63.158 10.83 0.00 39.54 3.62
1473 1481 3.265791 CTTCTCGAAATCCTTGTGGAGG 58.734 50.000 0.00 0.00 46.91 4.30
1617 1625 1.473434 GGGGCTATGACCTCGAAGTTG 60.473 57.143 0.00 0.00 0.00 3.16
1680 1688 1.216710 GGTGACAGAGAAGGCTCGG 59.783 63.158 0.00 0.00 45.98 4.63
1732 1740 1.065418 AGGGTTGTCCAATAAGCGGAG 60.065 52.381 0.00 0.00 38.24 4.63
1828 1836 1.751351 CCTGACGTTGGATAGAGAGCA 59.249 52.381 2.80 0.00 0.00 4.26
1890 1898 1.602311 AGCAAGCACAAGACTGAAGG 58.398 50.000 0.00 0.00 0.00 3.46
1891 1899 2.615447 TGAAGCAAGCACAAGACTGAAG 59.385 45.455 0.00 0.00 0.00 3.02
1892 1900 2.642427 TGAAGCAAGCACAAGACTGAA 58.358 42.857 0.00 0.00 0.00 3.02
1926 1934 4.438608 GCATTATGCAGTTGAACGAATGGA 60.439 41.667 12.80 0.00 44.26 3.41
2055 2063 3.959495 ATCACTTCCTGGCACCATTAT 57.041 42.857 0.00 0.00 0.00 1.28
2057 2065 3.737559 TTATCACTTCCTGGCACCATT 57.262 42.857 0.00 0.00 0.00 3.16
2062 2070 3.282021 GCAGATTTATCACTTCCTGGCA 58.718 45.455 0.00 0.00 0.00 4.92
2096 2104 3.136763 CTCATCAAGTATCGCCTGCAAT 58.863 45.455 0.00 0.00 0.00 3.56
2124 2132 6.428159 AGATTGCGGAACATTGGTAATCTATC 59.572 38.462 0.00 0.00 40.00 2.08
2217 2225 1.327690 TTCTCGAGGGCAGGCGTATT 61.328 55.000 13.56 0.00 0.00 1.89
2286 2294 4.160065 GGAGGTAAGGTCCTTCAGTTAGAC 59.840 50.000 7.61 0.00 38.02 2.59
2336 2348 1.608590 AGATGGAACGTTTTGGCACTG 59.391 47.619 0.46 0.00 0.00 3.66
2411 2423 5.453339 CCCTGTCATCGTACTGGATTTGTAT 60.453 44.000 10.94 0.00 40.02 2.29
2480 2492 2.881403 GCATGTTCTTCTCCACCATGGT 60.881 50.000 13.00 13.00 39.03 3.55
2553 2565 8.991026 CAAAATGATTCCATGAACAGCTAAAAA 58.009 29.630 0.00 0.00 32.36 1.94
2683 2695 2.682136 TACCACTGCGCCAGGCTA 60.682 61.111 10.54 0.00 44.05 3.93
2684 2696 4.087892 CTACCACTGCGCCAGGCT 62.088 66.667 10.54 0.00 44.05 4.58
2687 2699 1.153745 GACTCTACCACTGCGCCAG 60.154 63.158 4.18 4.99 37.52 4.85
2728 2743 1.156736 ACGAGGCTGGTTCAAATTCG 58.843 50.000 0.00 0.00 0.00 3.34
2730 2745 4.394729 TCTAAACGAGGCTGGTTCAAATT 58.605 39.130 15.43 2.22 0.00 1.82
2731 2746 4.015872 TCTAAACGAGGCTGGTTCAAAT 57.984 40.909 15.43 2.60 0.00 2.32
2849 2869 3.681593 TGACCAAGATTAAACTTCGGGG 58.318 45.455 14.12 8.15 0.00 5.73
2941 2962 3.059188 GTGTCTGGTTTGTTGATGTACCG 60.059 47.826 0.00 0.00 33.29 4.02
2971 2992 1.291033 TCCAGCCCTAGACAGGTACAT 59.709 52.381 0.00 0.00 40.79 2.29
2974 2995 0.032416 GGTCCAGCCCTAGACAGGTA 60.032 60.000 0.00 0.00 40.79 3.08
2975 2996 1.306226 GGTCCAGCCCTAGACAGGT 60.306 63.158 0.00 0.00 40.79 4.00
2976 2997 0.909610 TTGGTCCAGCCCTAGACAGG 60.910 60.000 0.00 0.00 42.22 4.00
2977 2998 0.984230 TTTGGTCCAGCCCTAGACAG 59.016 55.000 0.00 0.00 34.58 3.51
2978 2999 1.351017 CTTTTGGTCCAGCCCTAGACA 59.649 52.381 0.00 0.00 34.58 3.41
2979 3000 1.950954 GCTTTTGGTCCAGCCCTAGAC 60.951 57.143 0.00 0.00 36.04 2.59
2980 3001 0.328258 GCTTTTGGTCCAGCCCTAGA 59.672 55.000 0.00 0.00 36.04 2.43
3032 3053 0.801067 ACGAGCATAACGAGCCGAAC 60.801 55.000 1.50 0.00 32.57 3.95
3035 3056 1.269444 GCTACGAGCATAACGAGCCG 61.269 60.000 0.00 0.00 41.89 5.52
3036 3057 0.030908 AGCTACGAGCATAACGAGCC 59.969 55.000 9.09 0.00 45.56 4.70
3045 3066 1.092348 TAAGAAGCGAGCTACGAGCA 58.908 50.000 9.32 0.00 45.56 4.26
3110 3135 2.102633 CTCGTTAGCTCGCTCGTTAAG 58.897 52.381 0.00 0.00 0.00 1.85
3115 3140 0.908505 GAAACTCGTTAGCTCGCTCG 59.091 55.000 0.00 0.00 0.00 5.03
3118 3143 0.362512 CGTGAAACTCGTTAGCTCGC 59.637 55.000 0.00 0.00 31.75 5.03
3193 3218 4.277423 GGCTGAGGTGCTACAAAAAGTTTA 59.723 41.667 0.00 0.00 0.00 2.01
3197 3222 1.541588 GGGCTGAGGTGCTACAAAAAG 59.458 52.381 0.00 0.00 0.00 2.27
3198 3223 1.133637 TGGGCTGAGGTGCTACAAAAA 60.134 47.619 0.00 0.00 0.00 1.94
3214 3239 8.723942 ATGTCGATTAGATTAAATAGATGGGC 57.276 34.615 0.00 0.00 0.00 5.36
3268 3293 9.513906 TTTCAAGATGAAATATGGTGACTACAA 57.486 29.630 1.57 0.00 41.02 2.41
3291 3316 7.624360 TGATGAATGTGTAGGTATGGTTTTC 57.376 36.000 0.00 0.00 0.00 2.29
3372 3397 3.941657 AAACTCTGCTCGGCTCGGC 62.942 63.158 0.00 0.00 0.00 5.54
3383 3408 6.473397 AAGATTAACGAGCAGAAAACTCTG 57.527 37.500 0.00 0.00 40.51 3.35
3417 3442 2.181021 CGTTAAGGCTCGGCTCGT 59.819 61.111 0.00 0.00 0.00 4.18
3423 3448 1.855223 GCTCGTACTCGTTAAGGCTCG 60.855 57.143 0.00 0.00 38.33 5.03
3424 3449 1.401199 AGCTCGTACTCGTTAAGGCTC 59.599 52.381 0.00 0.00 38.33 4.70
3457 3482 1.218316 GGGGTGGACTAACGAGCAG 59.782 63.158 0.00 0.00 0.00 4.24
3458 3483 0.040058 TAGGGGTGGACTAACGAGCA 59.960 55.000 0.00 0.00 0.00 4.26
3467 3492 1.421480 GGACAGGTATAGGGGTGGAC 58.579 60.000 0.00 0.00 0.00 4.02
3470 3495 1.755393 GCGGGACAGGTATAGGGGTG 61.755 65.000 0.00 0.00 0.00 4.61
3472 3497 0.836400 ATGCGGGACAGGTATAGGGG 60.836 60.000 0.00 0.00 0.00 4.79
3488 3528 7.241042 TGGAACCACTATATTAGTCCTATGC 57.759 40.000 0.00 0.00 36.76 3.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.