Multiple sequence alignment - TraesCS4B01G255500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G255500 chr4B 100.000 4477 0 0 1 4477 520395486 520399962 0.000000e+00 8268.0
1 TraesCS4B01G255500 chr4D 92.535 3242 148 53 1299 4477 424466299 424469509 0.000000e+00 4560.0
2 TraesCS4B01G255500 chr4D 84.930 710 39 34 594 1241 424465513 424466216 0.000000e+00 656.0
3 TraesCS4B01G255500 chr4A 92.695 3176 164 40 1299 4428 40252842 40249689 0.000000e+00 4518.0
4 TraesCS4B01G255500 chr4A 89.329 656 35 9 659 1283 40253539 40252888 0.000000e+00 791.0
5 TraesCS4B01G255500 chr4A 88.350 103 10 2 561 662 40253815 40253714 6.080000e-24 122.0
6 TraesCS4B01G255500 chr5D 94.708 548 21 1 1 540 494779791 494780338 0.000000e+00 845.0
7 TraesCS4B01G255500 chr5D 88.848 538 48 4 4 533 370591819 370592352 0.000000e+00 651.0
8 TraesCS4B01G255500 chr5D 87.729 546 59 1 1 538 536750091 536750636 8.170000e-177 630.0
9 TraesCS4B01G255500 chr1D 94.717 530 20 1 1 522 92252462 92252991 0.000000e+00 817.0
10 TraesCS4B01G255500 chr1D 94.096 542 23 2 1 534 382252164 382252704 0.000000e+00 815.0
11 TraesCS4B01G255500 chr7D 93.761 545 25 2 1 537 134840635 134841178 0.000000e+00 809.0
12 TraesCS4B01G255500 chr5B 92.435 542 32 2 1 534 657434942 657434402 0.000000e+00 765.0
13 TraesCS4B01G255500 chr3D 92.096 544 34 2 1 535 520424622 520424079 0.000000e+00 758.0
14 TraesCS4B01G255500 chr7B 84.604 682 60 21 1299 1960 407389892 407390548 1.760000e-178 636.0
15 TraesCS4B01G255500 chrUn 88.957 489 54 0 47 535 1510353 1509865 4.950000e-169 604.0
16 TraesCS4B01G255500 chrUn 92.126 254 14 3 1588 1835 479459998 479460251 1.980000e-93 353.0
17 TraesCS4B01G255500 chrUn 80.488 123 12 5 1846 1956 479460245 479460367 2.870000e-12 84.2
18 TraesCS4B01G255500 chr1B 92.635 353 20 3 1489 1835 516975216 516974864 1.860000e-138 503.0
19 TraesCS4B01G255500 chr1B 92.351 353 21 3 1489 1835 117304958 117305310 8.650000e-137 497.0
20 TraesCS4B01G255500 chr1B 80.488 123 12 5 1846 1956 117305304 117305426 2.870000e-12 84.2
21 TraesCS4B01G255500 chr1B 80.488 123 12 5 1846 1956 516974870 516974748 2.870000e-12 84.2
22 TraesCS4B01G255500 chr3A 87.088 364 36 3 1489 1842 486034924 486035286 6.980000e-108 401.0
23 TraesCS4B01G255500 chr3A 92.424 66 5 0 1841 1906 486036652 486036717 1.330000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G255500 chr4B 520395486 520399962 4476 False 8268.000000 8268 100.000000 1 4477 1 chr4B.!!$F1 4476
1 TraesCS4B01G255500 chr4D 424465513 424469509 3996 False 2608.000000 4560 88.732500 594 4477 2 chr4D.!!$F1 3883
2 TraesCS4B01G255500 chr4A 40249689 40253815 4126 True 1810.333333 4518 90.124667 561 4428 3 chr4A.!!$R1 3867
3 TraesCS4B01G255500 chr5D 494779791 494780338 547 False 845.000000 845 94.708000 1 540 1 chr5D.!!$F2 539
4 TraesCS4B01G255500 chr5D 370591819 370592352 533 False 651.000000 651 88.848000 4 533 1 chr5D.!!$F1 529
5 TraesCS4B01G255500 chr5D 536750091 536750636 545 False 630.000000 630 87.729000 1 538 1 chr5D.!!$F3 537
6 TraesCS4B01G255500 chr1D 92252462 92252991 529 False 817.000000 817 94.717000 1 522 1 chr1D.!!$F1 521
7 TraesCS4B01G255500 chr1D 382252164 382252704 540 False 815.000000 815 94.096000 1 534 1 chr1D.!!$F2 533
8 TraesCS4B01G255500 chr7D 134840635 134841178 543 False 809.000000 809 93.761000 1 537 1 chr7D.!!$F1 536
9 TraesCS4B01G255500 chr5B 657434402 657434942 540 True 765.000000 765 92.435000 1 534 1 chr5B.!!$R1 533
10 TraesCS4B01G255500 chr3D 520424079 520424622 543 True 758.000000 758 92.096000 1 535 1 chr3D.!!$R1 534
11 TraesCS4B01G255500 chr7B 407389892 407390548 656 False 636.000000 636 84.604000 1299 1960 1 chr7B.!!$F1 661
12 TraesCS4B01G255500 chr3A 486034924 486036717 1793 False 248.150000 401 89.756000 1489 1906 2 chr3A.!!$F1 417

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
578 588 0.171231 GTTTCTGGGAATCAAGCCGC 59.829 55.0 0.00 0.0 0.0 6.53 F
1380 1703 0.037447 GGGAGAGCAGCTTCAACCTT 59.963 55.0 0.00 0.0 0.0 3.50 F
2100 3825 0.530288 TCGATTCGAGCACATCACCA 59.470 50.0 4.29 0.0 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2268 4008 0.108424 GCATCGACAGGAAGCTCACT 60.108 55.0 0.00 0.00 36.46 3.41 R
2836 4576 0.322277 ACAGCTTCTGGCAGTCCATG 60.322 55.0 15.27 11.89 42.51 3.66 R
3985 5768 0.250295 TCTTTTGACCCAGGCAGACG 60.250 55.0 0.00 0.00 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 76 5.295292 CGCTTGATGAAGGTGAATGTAGATT 59.705 40.000 0.00 0.00 0.00 2.40
94 103 1.608055 TTCTGGACGACGAGGTGTAA 58.392 50.000 0.00 0.00 0.00 2.41
258 267 3.198068 ACAAGCTATACATGTGGCTTCG 58.802 45.455 23.14 20.42 42.15 3.79
387 397 9.985730 AATTTTGTTCATGAATTTAGAAGCTCA 57.014 25.926 12.12 0.00 0.00 4.26
441 451 0.475044 TTAAACTGGGGCTTGGTCGT 59.525 50.000 0.00 0.00 0.00 4.34
549 559 2.629002 AAAAAGTCGCATGGTCGCT 58.371 47.368 0.00 0.00 0.00 4.93
550 560 0.238289 AAAAAGTCGCATGGTCGCTG 59.762 50.000 0.00 0.00 0.00 5.18
551 561 1.577328 AAAAGTCGCATGGTCGCTGG 61.577 55.000 0.00 0.00 0.00 4.85
552 562 2.449031 AAAGTCGCATGGTCGCTGGA 62.449 55.000 0.00 0.00 0.00 3.86
553 563 2.842394 AAGTCGCATGGTCGCTGGAG 62.842 60.000 0.00 0.00 0.00 3.86
554 564 4.147449 TCGCATGGTCGCTGGAGG 62.147 66.667 0.00 0.00 0.00 4.30
564 574 4.035102 GCTGGAGGCCGGGTTTCT 62.035 66.667 2.18 0.00 34.27 2.52
565 575 2.045926 CTGGAGGCCGGGTTTCTG 60.046 66.667 2.18 0.00 0.00 3.02
575 585 0.811281 CGGGTTTCTGGGAATCAAGC 59.189 55.000 0.00 0.00 0.00 4.01
578 588 0.171231 GTTTCTGGGAATCAAGCCGC 59.829 55.000 0.00 0.00 0.00 6.53
580 590 0.392998 TTCTGGGAATCAAGCCGCTC 60.393 55.000 0.00 0.00 0.00 5.03
586 596 1.078143 AATCAAGCCGCTCTGGTCC 60.078 57.895 0.00 0.00 41.21 4.46
590 600 2.654079 AAGCCGCTCTGGTCCTGAG 61.654 63.158 18.99 18.99 41.21 3.35
675 864 4.495844 CCGAAACTCAAAAACACTGAGACC 60.496 45.833 6.83 0.00 42.51 3.85
711 900 2.028020 CCCAGACCACTAAACCTCACTC 60.028 54.545 0.00 0.00 0.00 3.51
736 925 7.340743 TCAAGACAAAGATTCCAGTGGTTAAAA 59.659 33.333 9.54 0.00 0.00 1.52
781 970 0.886490 AGCCGACACAAGCTTCCAAG 60.886 55.000 0.00 0.00 35.22 3.61
843 1032 2.795297 GAGACAGGACGCGAGAGG 59.205 66.667 15.93 1.50 0.00 3.69
971 1237 0.533531 TGCACCTGCTTCACTCACTG 60.534 55.000 0.00 0.00 42.66 3.66
1029 1303 3.066900 ACGTCGGGTGAGATAAAGATGAG 59.933 47.826 0.00 0.00 0.00 2.90
1031 1311 2.034685 TCGGGTGAGATAAAGATGAGCG 59.965 50.000 0.00 0.00 0.00 5.03
1034 1314 3.553922 GGGTGAGATAAAGATGAGCGGAG 60.554 52.174 0.00 0.00 0.00 4.63
1058 1345 1.287739 AGTGAGAAGGGAGGAGAGAGG 59.712 57.143 0.00 0.00 0.00 3.69
1184 1471 0.248498 TTGAATCTACGAGCTCGCCG 60.248 55.000 34.83 24.86 44.43 6.46
1185 1472 2.011881 GAATCTACGAGCTCGCCGC 61.012 63.158 34.83 15.05 44.43 6.53
1209 1496 0.313672 TTGGCGCCATGAAACTGTTC 59.686 50.000 33.25 0.00 0.00 3.18
1241 1531 0.508641 CAGCGTGCAGTGACAAGTAC 59.491 55.000 0.00 0.00 0.00 2.73
1242 1532 0.389391 AGCGTGCAGTGACAAGTACT 59.611 50.000 0.00 0.00 0.00 2.73
1243 1533 0.784778 GCGTGCAGTGACAAGTACTC 59.215 55.000 0.00 0.00 0.00 2.59
1244 1534 1.419374 CGTGCAGTGACAAGTACTCC 58.581 55.000 0.00 0.00 0.00 3.85
1245 1535 1.419374 GTGCAGTGACAAGTACTCCG 58.581 55.000 0.00 0.00 0.00 4.63
1246 1536 1.037493 TGCAGTGACAAGTACTCCGT 58.963 50.000 0.00 0.00 0.00 4.69
1247 1537 2.030540 GTGCAGTGACAAGTACTCCGTA 60.031 50.000 0.00 0.00 0.00 4.02
1255 1545 9.017669 CAGTGACAAGTACTCCGTATTTTATAC 57.982 37.037 0.00 0.00 0.00 1.47
1263 1556 7.864379 AGTACTCCGTATTTTATACGTGGAATG 59.136 37.037 15.54 2.75 39.09 2.67
1283 1576 6.431234 GGAATGACATACTGAACCTGAAGTTT 59.569 38.462 0.00 0.00 39.40 2.66
1285 1578 5.924356 TGACATACTGAACCTGAAGTTTCA 58.076 37.500 0.00 0.00 39.40 2.69
1287 1580 6.650807 TGACATACTGAACCTGAAGTTTCATC 59.349 38.462 0.00 0.00 39.40 2.92
1288 1581 5.940470 ACATACTGAACCTGAAGTTTCATCC 59.060 40.000 0.00 0.00 39.40 3.51
1291 1584 4.256920 CTGAACCTGAAGTTTCATCCGAT 58.743 43.478 0.00 0.00 39.40 4.18
1292 1585 5.046591 ACTGAACCTGAAGTTTCATCCGATA 60.047 40.000 0.00 0.00 39.40 2.92
1294 1587 6.234920 TGAACCTGAAGTTTCATCCGATAAA 58.765 36.000 0.00 0.00 39.40 1.40
1295 1588 6.712998 TGAACCTGAAGTTTCATCCGATAAAA 59.287 34.615 0.00 0.00 39.40 1.52
1378 1701 1.377856 GGGGAGAGCAGCTTCAACC 60.378 63.158 0.00 0.00 0.00 3.77
1380 1703 0.037447 GGGAGAGCAGCTTCAACCTT 59.963 55.000 0.00 0.00 0.00 3.50
1409 1743 0.558712 ACCAACCAGCCCCAACTTTA 59.441 50.000 0.00 0.00 0.00 1.85
1410 1744 0.966179 CCAACCAGCCCCAACTTTAC 59.034 55.000 0.00 0.00 0.00 2.01
1413 1747 2.698274 CAACCAGCCCCAACTTTACTTT 59.302 45.455 0.00 0.00 0.00 2.66
1414 1748 2.594131 ACCAGCCCCAACTTTACTTTC 58.406 47.619 0.00 0.00 0.00 2.62
1415 1749 1.893137 CCAGCCCCAACTTTACTTTCC 59.107 52.381 0.00 0.00 0.00 3.13
1422 1756 1.600485 CAACTTTACTTTCCACCGCGT 59.400 47.619 4.92 0.00 0.00 6.01
1424 1760 1.223187 CTTTACTTTCCACCGCGTGT 58.777 50.000 4.92 0.00 0.00 4.49
1426 1762 0.938713 TTACTTTCCACCGCGTGTTG 59.061 50.000 4.92 0.00 0.00 3.33
1430 1766 0.878523 TTTCCACCGCGTGTTGAGAG 60.879 55.000 4.92 0.00 0.00 3.20
1433 1769 0.670546 CCACCGCGTGTTGAGAGATT 60.671 55.000 4.92 0.00 0.00 2.40
1437 1773 2.288579 ACCGCGTGTTGAGAGATTACAA 60.289 45.455 4.92 0.00 0.00 2.41
1439 1775 3.242518 CGCGTGTTGAGAGATTACAAGA 58.757 45.455 0.00 0.00 0.00 3.02
1441 1777 4.327357 CGCGTGTTGAGAGATTACAAGAAT 59.673 41.667 0.00 0.00 0.00 2.40
1442 1778 5.499334 CGCGTGTTGAGAGATTACAAGAATC 60.499 44.000 0.00 0.00 0.00 2.52
1443 1779 5.499334 GCGTGTTGAGAGATTACAAGAATCG 60.499 44.000 0.00 0.00 0.00 3.34
1444 1780 5.004821 CGTGTTGAGAGATTACAAGAATCGG 59.995 44.000 0.00 0.00 0.00 4.18
1445 1781 5.292101 GTGTTGAGAGATTACAAGAATCGGG 59.708 44.000 0.00 0.00 0.00 5.14
1446 1782 5.186992 TGTTGAGAGATTACAAGAATCGGGA 59.813 40.000 0.00 0.00 0.00 5.14
1448 1784 5.201243 TGAGAGATTACAAGAATCGGGAGA 58.799 41.667 0.00 0.00 46.90 3.71
1449 1785 5.656859 TGAGAGATTACAAGAATCGGGAGAA 59.343 40.000 0.00 0.00 45.37 2.87
1450 1786 6.325028 TGAGAGATTACAAGAATCGGGAGAAT 59.675 38.462 0.00 0.00 45.37 2.40
1451 1787 6.754193 AGAGATTACAAGAATCGGGAGAATC 58.246 40.000 0.00 0.00 45.37 2.52
1452 1788 5.533482 AGATTACAAGAATCGGGAGAATCG 58.467 41.667 0.00 0.00 43.47 3.34
1453 1789 4.730949 TTACAAGAATCGGGAGAATCGT 57.269 40.909 0.00 0.00 43.47 3.73
1456 1792 3.262420 CAAGAATCGGGAGAATCGTGTT 58.738 45.455 0.00 0.00 43.47 3.32
1457 1793 4.430007 CAAGAATCGGGAGAATCGTGTTA 58.570 43.478 0.00 0.00 43.47 2.41
1458 1794 4.043037 AGAATCGGGAGAATCGTGTTAC 57.957 45.455 0.00 0.00 43.47 2.50
1459 1795 3.446161 AGAATCGGGAGAATCGTGTTACA 59.554 43.478 0.00 0.00 43.47 2.41
1469 1805 6.035112 GGAGAATCGTGTTACAAGTTCTGATC 59.965 42.308 15.60 0.00 34.37 2.92
1476 1812 6.419710 CGTGTTACAAGTTCTGATCACAAGTA 59.580 38.462 0.00 0.00 0.00 2.24
1477 1813 7.116376 CGTGTTACAAGTTCTGATCACAAGTAT 59.884 37.037 0.00 0.00 0.00 2.12
1478 1814 8.223769 GTGTTACAAGTTCTGATCACAAGTATG 58.776 37.037 0.00 0.00 0.00 2.39
1479 1815 5.869753 ACAAGTTCTGATCACAAGTATGC 57.130 39.130 0.00 0.00 0.00 3.14
1480 1816 4.389992 ACAAGTTCTGATCACAAGTATGCG 59.610 41.667 0.00 0.00 0.00 4.73
1481 1817 3.525537 AGTTCTGATCACAAGTATGCGG 58.474 45.455 0.00 0.00 0.00 5.69
1482 1818 3.195610 AGTTCTGATCACAAGTATGCGGA 59.804 43.478 0.00 0.00 0.00 5.54
1483 1819 4.122776 GTTCTGATCACAAGTATGCGGAT 58.877 43.478 0.00 0.00 0.00 4.18
1484 1820 3.721035 TCTGATCACAAGTATGCGGATG 58.279 45.455 0.00 0.00 0.00 3.51
1485 1821 3.132824 TCTGATCACAAGTATGCGGATGT 59.867 43.478 0.00 0.00 0.00 3.06
1486 1822 3.872696 TGATCACAAGTATGCGGATGTT 58.127 40.909 0.00 0.00 0.00 2.71
1487 1823 3.871006 TGATCACAAGTATGCGGATGTTC 59.129 43.478 0.00 0.00 0.00 3.18
1700 2036 0.803768 CCGAGCACCTTGAGATGACG 60.804 60.000 0.00 0.00 0.00 4.35
2063 3788 1.827681 TGCTCTACGCTCAGAAGTCT 58.172 50.000 0.00 0.00 40.11 3.24
2066 3791 3.199677 GCTCTACGCTCAGAAGTCTCTA 58.800 50.000 0.00 0.00 35.14 2.43
2073 3798 3.311322 CGCTCAGAAGTCTCTACGAAGAT 59.689 47.826 0.00 0.00 0.00 2.40
2078 3803 5.098893 CAGAAGTCTCTACGAAGATTGGTG 58.901 45.833 0.00 0.00 0.00 4.17
2080 3805 4.974368 AGTCTCTACGAAGATTGGTGAG 57.026 45.455 0.00 0.00 0.00 3.51
2085 3810 3.945921 TCTACGAAGATTGGTGAGTCGAT 59.054 43.478 0.00 0.00 35.71 3.59
2090 3815 3.428746 AGATTGGTGAGTCGATTCGAG 57.571 47.619 9.42 0.00 36.23 4.04
2100 3825 0.530288 TCGATTCGAGCACATCACCA 59.470 50.000 4.29 0.00 0.00 4.17
2101 3826 0.647410 CGATTCGAGCACATCACCAC 59.353 55.000 0.00 0.00 0.00 4.16
2112 3850 2.738846 CACATCACCACACTCTTGCTAC 59.261 50.000 0.00 0.00 0.00 3.58
2113 3851 2.634940 ACATCACCACACTCTTGCTACT 59.365 45.455 0.00 0.00 0.00 2.57
2114 3852 3.832490 ACATCACCACACTCTTGCTACTA 59.168 43.478 0.00 0.00 0.00 1.82
2115 3853 3.936372 TCACCACACTCTTGCTACTAC 57.064 47.619 0.00 0.00 0.00 2.73
2126 3864 5.064962 ACTCTTGCTACTACTAGCTAACGTG 59.935 44.000 0.00 0.00 45.20 4.49
2128 3866 4.871993 TGCTACTACTAGCTAACGTGTC 57.128 45.455 0.00 0.00 45.20 3.67
2129 3867 4.511527 TGCTACTACTAGCTAACGTGTCT 58.488 43.478 0.00 0.00 45.20 3.41
2130 3868 4.331992 TGCTACTACTAGCTAACGTGTCTG 59.668 45.833 0.00 0.00 45.20 3.51
2131 3869 4.260702 GCTACTACTAGCTAACGTGTCTGG 60.261 50.000 0.00 0.00 42.11 3.86
2268 4008 2.303022 GAGGGAGAAGAACACCATGTCA 59.697 50.000 0.00 0.00 0.00 3.58
2457 4197 2.202987 GCGGTGCAGAGGATCCTG 60.203 66.667 22.02 7.96 33.66 3.86
2463 4203 3.554342 CAGAGGATCCTGGCCGGG 61.554 72.222 26.30 26.30 33.66 5.73
2723 4463 5.914033 CCTGAAGGTCCGTTCATTAGAATA 58.086 41.667 3.19 0.00 35.88 1.75
2727 4467 8.473358 TGAAGGTCCGTTCATTAGAATAGATA 57.527 34.615 0.00 0.00 35.92 1.98
2772 4512 3.614092 AGTGGATAGTGCTCAAATGTGG 58.386 45.455 0.00 0.00 0.00 4.17
2774 4514 3.375299 GTGGATAGTGCTCAAATGTGGTC 59.625 47.826 0.00 0.00 0.00 4.02
2836 4576 2.665185 AAGAAGGTGTGCGGCGTC 60.665 61.111 9.37 0.91 0.00 5.19
2920 4660 3.056458 CAGACGGTGGTGCAGGTA 58.944 61.111 0.00 0.00 0.00 3.08
3271 5032 4.767255 AAGAAGCTCGGGCGGCTG 62.767 66.667 12.43 12.43 44.37 4.85
3435 5204 5.902681 TGTACAGCTTTATAATCTGCGTCT 58.097 37.500 12.53 0.82 0.00 4.18
3455 5224 3.887110 TCTCAGTTCGTGTCAAGTTCCTA 59.113 43.478 0.00 0.00 0.00 2.94
3486 5255 2.875296 ACTCAGGCCATTGTAGCAAAA 58.125 42.857 5.01 0.00 0.00 2.44
3592 5365 1.587034 GCTCTACGATTACCACAACGC 59.413 52.381 0.00 0.00 0.00 4.84
3623 5396 3.243670 GGAAGCATCTGATGTCGATCTCA 60.244 47.826 18.19 0.00 0.00 3.27
3648 5421 1.420430 TCCTCTCCCGTTTCTTGTGT 58.580 50.000 0.00 0.00 0.00 3.72
3693 5468 0.604780 CTAGCAATGCATCCCCCTCG 60.605 60.000 8.35 0.00 0.00 4.63
3717 5500 0.745128 AAACGACAACCAGCACCGAA 60.745 50.000 0.00 0.00 0.00 4.30
3719 5502 0.534203 ACGACAACCAGCACCGAAAT 60.534 50.000 0.00 0.00 0.00 2.17
3729 5512 2.035626 ACCGAAATGTGGCCTGGG 59.964 61.111 3.32 0.00 0.00 4.45
3771 5554 3.240491 CCATATGGGCACGGGACT 58.760 61.111 14.52 0.00 0.00 3.85
3772 5555 1.227943 CCATATGGGCACGGGACTG 60.228 63.158 14.52 0.00 0.00 3.51
3778 5561 2.288025 GGGCACGGGACTGTCCTTA 61.288 63.158 25.01 0.00 36.57 2.69
3787 5570 3.547746 GGGACTGTCCTTACAACAAACA 58.452 45.455 25.01 0.00 36.57 2.83
3842 5625 9.500785 GATTTCCATTCTCCTATCCTAAGAAAG 57.499 37.037 0.00 0.00 33.10 2.62
3889 5672 0.615331 ATGGATCAGTCGGCAACACT 59.385 50.000 0.00 0.00 0.00 3.55
3890 5673 0.037326 TGGATCAGTCGGCAACACTC 60.037 55.000 0.00 0.00 0.00 3.51
3891 5674 0.037326 GGATCAGTCGGCAACACTCA 60.037 55.000 0.00 0.00 0.00 3.41
3895 5678 0.304705 CAGTCGGCAACACTCAACAC 59.695 55.000 0.00 0.00 0.00 3.32
3976 5759 4.156008 GGTTCAGGACATCAAGCGTTTTAT 59.844 41.667 0.00 0.00 0.00 1.40
3984 5767 3.060736 TCAAGCGTTTTATAGGGCACA 57.939 42.857 0.00 0.00 0.00 4.57
3985 5768 2.745281 TCAAGCGTTTTATAGGGCACAC 59.255 45.455 0.00 0.00 0.00 3.82
3987 5770 1.081094 GCGTTTTATAGGGCACACGT 58.919 50.000 0.00 0.00 0.00 4.49
4065 5849 7.502561 AGACAAGCCATTAATTACCTATTCCAC 59.497 37.037 0.00 0.00 0.00 4.02
4080 5864 6.602009 ACCTATTCCACTTTTTACATAGGTGC 59.398 38.462 7.70 0.00 43.16 5.01
4131 5915 2.008543 GCACATCAGCTTCCGATCACA 61.009 52.381 0.00 0.00 0.00 3.58
4161 5945 1.472376 GCTGTGCCACTCTATCCAGAC 60.472 57.143 0.00 0.00 0.00 3.51
4269 6054 1.984570 CAGGAAGGAGGGCGTGAGA 60.985 63.158 0.00 0.00 0.00 3.27
4428 6213 3.325870 CGTGATCTACCAAGAAACAGCA 58.674 45.455 0.00 0.00 34.73 4.41
4434 6219 6.660521 TGATCTACCAAGAAACAGCAATGATT 59.339 34.615 0.00 0.00 34.73 2.57
4435 6220 6.500684 TCTACCAAGAAACAGCAATGATTC 57.499 37.500 0.00 0.00 0.00 2.52
4436 6221 4.164822 ACCAAGAAACAGCAATGATTCG 57.835 40.909 0.00 0.00 0.00 3.34
4453 6238 5.939457 TGATTCGCTATATTAGACCTCACG 58.061 41.667 0.00 0.00 0.00 4.35
4465 6250 2.158957 AGACCTCACGCAGTCAAAAGAA 60.159 45.455 0.00 0.00 41.61 2.52
4467 6252 3.214328 ACCTCACGCAGTCAAAAGAAAT 58.786 40.909 0.00 0.00 41.61 2.17
4468 6253 3.003689 ACCTCACGCAGTCAAAAGAAATG 59.996 43.478 0.00 0.00 41.61 2.32
4469 6254 2.975851 CTCACGCAGTCAAAAGAAATGC 59.024 45.455 0.00 0.00 41.61 3.56
4470 6255 2.357323 TCACGCAGTCAAAAGAAATGCA 59.643 40.909 0.00 0.00 41.61 3.96
4471 6256 3.004629 TCACGCAGTCAAAAGAAATGCAT 59.995 39.130 0.00 0.00 41.61 3.96
4474 6259 5.401972 CACGCAGTCAAAAGAAATGCATTTA 59.598 36.000 24.15 5.31 41.61 1.40
4475 6260 6.089820 CACGCAGTCAAAAGAAATGCATTTAT 59.910 34.615 24.15 18.84 41.61 1.40
4476 6261 7.273164 CACGCAGTCAAAAGAAATGCATTTATA 59.727 33.333 24.15 3.79 41.61 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 76 1.006571 GTCGTCCAGAAACCGCAGA 60.007 57.895 0.00 0.00 0.00 4.26
98 107 4.229876 GTTTCTGTAAATTGCTGCCACTC 58.770 43.478 0.00 0.00 0.00 3.51
141 150 1.860950 CTGAATACCACCGATGAAGCG 59.139 52.381 0.00 0.00 0.00 4.68
258 267 3.827008 TCTATCACCACTGAGCAATCC 57.173 47.619 0.00 0.00 0.00 3.01
381 391 1.140816 GAGCTTCGACGTTTGAGCTT 58.859 50.000 17.68 6.04 32.34 3.74
387 397 2.755650 AGATTGTGAGCTTCGACGTTT 58.244 42.857 0.00 0.00 0.00 3.60
547 557 4.035102 AGAAACCCGGCCTCCAGC 62.035 66.667 0.00 0.00 42.60 4.85
548 558 2.045926 CAGAAACCCGGCCTCCAG 60.046 66.667 0.00 0.00 0.00 3.86
549 559 3.646715 CCAGAAACCCGGCCTCCA 61.647 66.667 0.00 0.00 0.00 3.86
550 560 4.426313 CCCAGAAACCCGGCCTCC 62.426 72.222 0.00 0.00 0.00 4.30
551 561 2.211468 ATTCCCAGAAACCCGGCCTC 62.211 60.000 0.00 0.00 0.00 4.70
552 562 2.211468 GATTCCCAGAAACCCGGCCT 62.211 60.000 0.00 0.00 0.00 5.19
553 563 1.753078 GATTCCCAGAAACCCGGCC 60.753 63.158 0.00 0.00 0.00 6.13
554 564 0.610785 TTGATTCCCAGAAACCCGGC 60.611 55.000 0.00 0.00 0.00 6.13
555 565 1.463674 CTTGATTCCCAGAAACCCGG 58.536 55.000 0.00 0.00 0.00 5.73
556 566 0.811281 GCTTGATTCCCAGAAACCCG 59.189 55.000 0.00 0.00 0.00 5.28
557 567 1.186200 GGCTTGATTCCCAGAAACCC 58.814 55.000 0.00 0.00 0.00 4.11
558 568 0.811281 CGGCTTGATTCCCAGAAACC 59.189 55.000 0.00 0.00 0.00 3.27
559 569 0.171231 GCGGCTTGATTCCCAGAAAC 59.829 55.000 0.00 0.00 0.00 2.78
560 570 0.038166 AGCGGCTTGATTCCCAGAAA 59.962 50.000 0.00 0.00 0.00 2.52
561 571 0.392998 GAGCGGCTTGATTCCCAGAA 60.393 55.000 2.97 0.00 0.00 3.02
562 572 1.221840 GAGCGGCTTGATTCCCAGA 59.778 57.895 2.97 0.00 0.00 3.86
563 573 1.094073 CAGAGCGGCTTGATTCCCAG 61.094 60.000 2.97 0.00 0.00 4.45
564 574 1.078214 CAGAGCGGCTTGATTCCCA 60.078 57.895 2.97 0.00 0.00 4.37
565 575 1.821332 CCAGAGCGGCTTGATTCCC 60.821 63.158 2.97 0.00 0.00 3.97
575 585 0.681564 ACTACTCAGGACCAGAGCGG 60.682 60.000 13.55 9.01 42.50 5.52
578 588 4.202367 ACCAAAAACTACTCAGGACCAGAG 60.202 45.833 12.15 12.15 39.04 3.35
580 590 4.065789 GACCAAAAACTACTCAGGACCAG 58.934 47.826 0.00 0.00 0.00 4.00
586 596 8.964476 ATATGTATGGACCAAAAACTACTCAG 57.036 34.615 0.00 0.00 0.00 3.35
653 664 4.588278 GGTCTCAGTGTTTTTGAGTTTCG 58.412 43.478 2.57 0.00 42.11 3.46
675 864 2.216750 CTGGGTTTCATTGGGCTGCG 62.217 60.000 0.00 0.00 0.00 5.18
711 900 6.633500 TTAACCACTGGAATCTTTGTCTTG 57.367 37.500 0.71 0.00 0.00 3.02
756 945 0.107508 AGCTTGTGTCGGCTATGCAT 60.108 50.000 3.79 3.79 37.00 3.96
762 951 0.886490 CTTGGAAGCTTGTGTCGGCT 60.886 55.000 2.10 0.00 40.85 5.52
781 970 0.678048 AGCAAGATGCCCTTCGGTTC 60.678 55.000 0.00 0.00 46.52 3.62
971 1237 4.891037 GGGGCAGCCAGAGCATCC 62.891 72.222 15.19 0.00 43.56 3.51
1029 1303 0.249657 CCCTTCTCACTATGCTCCGC 60.250 60.000 0.00 0.00 0.00 5.54
1031 1311 1.691434 CCTCCCTTCTCACTATGCTCC 59.309 57.143 0.00 0.00 0.00 4.70
1034 1314 2.627699 CTCTCCTCCCTTCTCACTATGC 59.372 54.545 0.00 0.00 0.00 3.14
1040 1320 0.633921 CCCTCTCTCCTCCCTTCTCA 59.366 60.000 0.00 0.00 0.00 3.27
1043 1323 2.131067 CGCCCTCTCTCCTCCCTTC 61.131 68.421 0.00 0.00 0.00 3.46
1044 1324 2.042435 CGCCCTCTCTCCTCCCTT 60.042 66.667 0.00 0.00 0.00 3.95
1045 1325 4.150454 CCGCCCTCTCTCCTCCCT 62.150 72.222 0.00 0.00 0.00 4.20
1063 1350 2.724708 GAGCACTCACGCAAGCTCG 61.725 63.158 0.00 0.00 43.27 5.03
1184 1471 0.038343 TTTCATGGCGCCAAAGAAGC 60.038 50.000 36.33 0.00 0.00 3.86
1185 1472 1.270550 AGTTTCATGGCGCCAAAGAAG 59.729 47.619 36.33 20.29 0.00 2.85
1209 1496 2.176055 CGCTGCTGCTTGCTTGAG 59.824 61.111 14.03 0.00 43.37 3.02
1241 1531 6.698329 TGTCATTCCACGTATAAAATACGGAG 59.302 38.462 20.00 13.14 44.38 4.63
1242 1532 6.571605 TGTCATTCCACGTATAAAATACGGA 58.428 36.000 20.00 8.70 44.38 4.69
1243 1533 6.831727 TGTCATTCCACGTATAAAATACGG 57.168 37.500 20.00 10.94 44.38 4.02
1244 1534 9.188588 AGTATGTCATTCCACGTATAAAATACG 57.811 33.333 15.77 15.77 45.44 3.06
1247 1537 9.607988 TTCAGTATGTCATTCCACGTATAAAAT 57.392 29.630 0.00 0.00 37.40 1.82
1255 1545 3.618594 CAGGTTCAGTATGTCATTCCACG 59.381 47.826 0.00 0.00 37.40 4.94
1263 1556 6.092807 GGATGAAACTTCAGGTTCAGTATGTC 59.907 42.308 12.69 5.28 41.08 3.06
1294 1587 4.190772 CTGCACCAACCAGTTGAAATTTT 58.809 39.130 12.06 0.00 42.93 1.82
1295 1588 3.432046 CCTGCACCAACCAGTTGAAATTT 60.432 43.478 12.06 0.00 42.93 1.82
1297 1590 1.688197 CCTGCACCAACCAGTTGAAAT 59.312 47.619 12.06 0.00 42.93 2.17
1398 1727 1.616865 GGTGGAAAGTAAAGTTGGGGC 59.383 52.381 0.00 0.00 0.00 5.80
1409 1743 1.153329 TCAACACGCGGTGGAAAGT 60.153 52.632 12.47 0.00 37.94 2.66
1410 1744 0.878523 TCTCAACACGCGGTGGAAAG 60.879 55.000 12.47 0.26 37.94 2.62
1413 1747 1.532604 ATCTCTCAACACGCGGTGGA 61.533 55.000 12.47 7.87 37.94 4.02
1414 1748 0.670546 AATCTCTCAACACGCGGTGG 60.671 55.000 12.47 3.09 37.94 4.61
1415 1749 1.654105 GTAATCTCTCAACACGCGGTG 59.346 52.381 12.47 9.20 39.75 4.94
1422 1756 5.186992 TCCCGATTCTTGTAATCTCTCAACA 59.813 40.000 0.00 0.00 0.00 3.33
1424 1760 5.656859 TCTCCCGATTCTTGTAATCTCTCAA 59.343 40.000 0.00 0.00 0.00 3.02
1426 1762 5.776173 TCTCCCGATTCTTGTAATCTCTC 57.224 43.478 0.00 0.00 0.00 3.20
1430 1766 5.175856 CACGATTCTCCCGATTCTTGTAATC 59.824 44.000 0.00 0.00 0.00 1.75
1433 1769 3.446161 ACACGATTCTCCCGATTCTTGTA 59.554 43.478 0.00 0.00 33.19 2.41
1437 1773 3.446161 TGTAACACGATTCTCCCGATTCT 59.554 43.478 0.00 0.00 0.00 2.40
1439 1775 3.880047 TGTAACACGATTCTCCCGATT 57.120 42.857 0.00 0.00 0.00 3.34
1441 1777 2.559668 ACTTGTAACACGATTCTCCCGA 59.440 45.455 0.00 0.00 0.00 5.14
1442 1778 2.955614 ACTTGTAACACGATTCTCCCG 58.044 47.619 0.00 0.00 0.00 5.14
1443 1779 4.389077 CAGAACTTGTAACACGATTCTCCC 59.611 45.833 0.00 0.00 0.00 4.30
1444 1780 5.227908 TCAGAACTTGTAACACGATTCTCC 58.772 41.667 0.00 0.00 0.00 3.71
1445 1781 6.586463 TGATCAGAACTTGTAACACGATTCTC 59.414 38.462 0.00 0.00 0.00 2.87
1446 1782 6.366332 GTGATCAGAACTTGTAACACGATTCT 59.634 38.462 0.00 0.00 0.00 2.40
1448 1784 5.989168 TGTGATCAGAACTTGTAACACGATT 59.011 36.000 0.00 0.00 32.55 3.34
1449 1785 5.538118 TGTGATCAGAACTTGTAACACGAT 58.462 37.500 0.00 0.00 32.55 3.73
1450 1786 4.939271 TGTGATCAGAACTTGTAACACGA 58.061 39.130 0.00 0.00 32.55 4.35
1451 1787 5.234329 ACTTGTGATCAGAACTTGTAACACG 59.766 40.000 0.23 0.00 32.55 4.49
1452 1788 6.604735 ACTTGTGATCAGAACTTGTAACAC 57.395 37.500 0.23 0.00 0.00 3.32
1453 1789 7.095229 GCATACTTGTGATCAGAACTTGTAACA 60.095 37.037 0.23 0.00 0.00 2.41
1454 1790 7.237173 GCATACTTGTGATCAGAACTTGTAAC 58.763 38.462 0.23 0.00 0.00 2.50
1456 1792 5.576774 CGCATACTTGTGATCAGAACTTGTA 59.423 40.000 0.23 3.68 35.26 2.41
1457 1793 4.389992 CGCATACTTGTGATCAGAACTTGT 59.610 41.667 0.23 1.44 35.26 3.16
1458 1794 4.201753 CCGCATACTTGTGATCAGAACTTG 60.202 45.833 0.23 1.41 35.26 3.16
1459 1795 3.935203 CCGCATACTTGTGATCAGAACTT 59.065 43.478 0.23 0.00 35.26 2.66
1469 1805 2.352651 CAGGAACATCCGCATACTTGTG 59.647 50.000 0.00 0.00 42.75 3.33
1476 1812 2.117156 GCTGCAGGAACATCCGCAT 61.117 57.895 17.12 0.00 42.10 4.73
1477 1813 2.747460 GCTGCAGGAACATCCGCA 60.747 61.111 17.12 12.77 42.75 5.69
1478 1814 2.437359 AGCTGCAGGAACATCCGC 60.437 61.111 17.12 0.00 42.75 5.54
1479 1815 1.817099 GGAGCTGCAGGAACATCCG 60.817 63.158 17.12 0.00 42.75 4.18
1480 1816 1.452833 GGGAGCTGCAGGAACATCC 60.453 63.158 17.12 7.61 36.58 3.51
1481 1817 1.028868 GTGGGAGCTGCAGGAACATC 61.029 60.000 17.12 0.00 0.00 3.06
1482 1818 1.001641 GTGGGAGCTGCAGGAACAT 60.002 57.895 17.12 0.00 0.00 2.71
1483 1819 2.149383 AGTGGGAGCTGCAGGAACA 61.149 57.895 17.12 0.00 0.00 3.18
1484 1820 1.673665 CAGTGGGAGCTGCAGGAAC 60.674 63.158 17.12 0.00 0.00 3.62
1485 1821 2.752358 CAGTGGGAGCTGCAGGAA 59.248 61.111 17.12 0.00 0.00 3.36
1486 1822 3.324930 CCAGTGGGAGCTGCAGGA 61.325 66.667 17.12 0.00 35.28 3.86
1568 1904 2.592861 GGCATGCCCGTGATCTCC 60.593 66.667 27.24 0.00 0.00 3.71
1691 2027 0.611896 TGCACTCCTCCGTCATCTCA 60.612 55.000 0.00 0.00 0.00 3.27
1700 2036 4.785453 CCGGGCTTGCACTCCTCC 62.785 72.222 0.00 0.00 0.00 4.30
2063 3788 3.340928 TCGACTCACCAATCTTCGTAGA 58.659 45.455 0.00 0.00 34.21 2.59
2066 3791 3.512680 GAATCGACTCACCAATCTTCGT 58.487 45.455 0.00 0.00 0.00 3.85
2073 3798 0.601057 TGCTCGAATCGACTCACCAA 59.399 50.000 0.00 0.00 0.00 3.67
2078 3803 1.849219 GTGATGTGCTCGAATCGACTC 59.151 52.381 0.00 0.00 0.00 3.36
2080 3805 0.924090 GGTGATGTGCTCGAATCGAC 59.076 55.000 0.00 0.00 0.00 4.20
2085 3810 0.392706 AGTGTGGTGATGTGCTCGAA 59.607 50.000 0.00 0.00 0.00 3.71
2090 3815 0.239347 GCAAGAGTGTGGTGATGTGC 59.761 55.000 0.00 0.00 0.00 4.57
2112 3850 2.422479 TGCCAGACACGTTAGCTAGTAG 59.578 50.000 0.00 0.00 0.00 2.57
2113 3851 2.163010 GTGCCAGACACGTTAGCTAGTA 59.837 50.000 0.00 0.00 40.07 1.82
2114 3852 1.067776 GTGCCAGACACGTTAGCTAGT 60.068 52.381 0.00 0.00 40.07 2.57
2115 3853 1.630148 GTGCCAGACACGTTAGCTAG 58.370 55.000 0.00 0.00 40.07 3.42
2126 3864 0.249489 ACAAGTCGACAGTGCCAGAC 60.249 55.000 19.50 5.41 0.00 3.51
2128 3866 1.792949 GTTACAAGTCGACAGTGCCAG 59.207 52.381 19.50 1.58 0.00 4.85
2129 3867 1.411246 AGTTACAAGTCGACAGTGCCA 59.589 47.619 19.50 4.39 0.00 4.92
2130 3868 2.150397 AGTTACAAGTCGACAGTGCC 57.850 50.000 19.50 10.29 0.00 5.01
2131 3869 2.864343 ACAAGTTACAAGTCGACAGTGC 59.136 45.455 19.50 12.47 0.00 4.40
2268 4008 0.108424 GCATCGACAGGAAGCTCACT 60.108 55.000 0.00 0.00 36.46 3.41
2457 4197 2.686106 TTCTCCAGGTACCCGGCC 60.686 66.667 9.56 0.00 0.00 6.13
2463 4203 1.516423 GCCCTCGTTCTCCAGGTAC 59.484 63.158 0.00 0.00 0.00 3.34
2469 4209 4.516195 GCCTCGCCCTCGTTCTCC 62.516 72.222 0.00 0.00 36.96 3.71
2772 4512 2.700773 GCCTGCCCAAACCATCGAC 61.701 63.158 0.00 0.00 0.00 4.20
2774 4514 3.814268 CGCCTGCCCAAACCATCG 61.814 66.667 0.00 0.00 0.00 3.84
2836 4576 0.322277 ACAGCTTCTGGCAGTCCATG 60.322 55.000 15.27 11.89 42.51 3.66
2920 4660 2.258591 CGCTGCTCGTGGTACAGT 59.741 61.111 0.00 0.00 41.80 3.55
3011 4751 4.487412 CTCCCGCCCGTACGACAC 62.487 72.222 18.76 4.39 34.06 3.67
3435 5204 3.382227 TGTAGGAACTTGACACGAACTGA 59.618 43.478 0.00 0.00 41.75 3.41
3455 5224 3.228188 TGGCCTGAGTTTCTTCATTGT 57.772 42.857 3.32 0.00 0.00 2.71
3486 5255 1.613437 CTGAACCCCGAGTTGCAAAAT 59.387 47.619 0.00 0.00 39.40 1.82
3623 5396 1.104630 GAAACGGGAGAGGATCGTCT 58.895 55.000 17.54 17.54 42.67 4.18
3648 5421 1.374560 CAACGTTATCGCAATCCCCA 58.625 50.000 0.00 0.00 41.18 4.96
3693 5468 1.098712 TGCTGGTTGTCGTTTGTCCC 61.099 55.000 0.00 0.00 0.00 4.46
3717 5500 1.266867 GCCAAATCCCAGGCCACATT 61.267 55.000 5.01 0.00 45.18 2.71
3719 5502 2.283821 GCCAAATCCCAGGCCACA 60.284 61.111 5.01 0.00 45.18 4.17
3729 5512 3.487372 GGTTATCTACCAGGGCCAAATC 58.513 50.000 6.18 0.00 46.92 2.17
3771 5554 4.097286 GCCTCTTTGTTTGTTGTAAGGACA 59.903 41.667 0.00 0.00 0.00 4.02
3772 5555 4.607955 GCCTCTTTGTTTGTTGTAAGGAC 58.392 43.478 0.00 0.00 0.00 3.85
3778 5561 3.859411 TTTCGCCTCTTTGTTTGTTGT 57.141 38.095 0.00 0.00 0.00 3.32
3787 5570 3.149981 CTCCTTTCCTTTTCGCCTCTTT 58.850 45.455 0.00 0.00 0.00 2.52
3889 5672 1.813178 CAGAGAGCCTAGACGTGTTGA 59.187 52.381 0.00 0.00 0.00 3.18
3890 5673 1.542030 ACAGAGAGCCTAGACGTGTTG 59.458 52.381 0.00 0.00 0.00 3.33
3891 5674 1.912417 ACAGAGAGCCTAGACGTGTT 58.088 50.000 0.00 0.00 0.00 3.32
3895 5678 1.950216 TGCATACAGAGAGCCTAGACG 59.050 52.381 0.00 0.00 0.00 4.18
3984 5767 0.535102 CTTTTGACCCAGGCAGACGT 60.535 55.000 0.00 0.00 0.00 4.34
3985 5768 0.250295 TCTTTTGACCCAGGCAGACG 60.250 55.000 0.00 0.00 0.00 4.18
3987 5770 2.555227 GGATTCTTTTGACCCAGGCAGA 60.555 50.000 0.00 0.00 0.00 4.26
4080 5864 5.220624 GGAGACACACACGTATCTAGTACTG 60.221 48.000 5.39 0.00 0.00 2.74
4131 5915 0.734889 GTGGCACAGCTAATCGCATT 59.265 50.000 13.86 0.00 41.80 3.56
4161 5945 1.325338 CCCAATTACGGTTTAGCGACG 59.675 52.381 8.45 0.00 0.00 5.12
4362 6147 4.794439 TCGTCGGCAGGCATCACG 62.794 66.667 4.23 4.23 0.00 4.35
4428 6213 7.030165 CGTGAGGTCTAATATAGCGAATCATT 58.970 38.462 0.00 0.00 0.00 2.57
4434 6219 3.143728 TGCGTGAGGTCTAATATAGCGA 58.856 45.455 0.00 0.00 0.00 4.93
4435 6220 3.058155 ACTGCGTGAGGTCTAATATAGCG 60.058 47.826 0.00 0.00 0.00 4.26
4436 6221 4.023107 TGACTGCGTGAGGTCTAATATAGC 60.023 45.833 0.00 0.00 34.01 2.97


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.