Multiple sequence alignment - TraesCS4B01G253000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G253000 chr4B 100.000 7255 0 0 1 7255 518870437 518877691 0.000000e+00 13398
1 TraesCS4B01G253000 chr4B 86.861 548 49 9 79 618 554832499 554833031 6.270000e-165 592
2 TraesCS4B01G253000 chr4B 99.451 182 1 0 3967 4148 249050240 249050059 1.510000e-86 331
3 TraesCS4B01G253000 chr4B 93.182 220 11 3 3933 4149 551054377 551054159 3.270000e-83 320
4 TraesCS4B01G253000 chr4A 94.303 2159 89 11 4152 6292 42124212 42122070 0.000000e+00 3275
5 TraesCS4B01G253000 chr4A 92.703 2083 100 25 1310 3354 42126743 42124675 0.000000e+00 2957
6 TraesCS4B01G253000 chr4A 94.669 619 22 3 3353 3970 42124803 42124195 0.000000e+00 950
7 TraesCS4B01G253000 chr4A 93.400 500 27 3 6761 7255 42121097 42120599 0.000000e+00 736
8 TraesCS4B01G253000 chr4A 88.256 579 58 6 93 663 702776366 702776942 0.000000e+00 684
9 TraesCS4B01G253000 chr4A 89.209 556 27 18 661 1187 42127529 42126978 0.000000e+00 664
10 TraesCS4B01G253000 chr4A 95.389 347 10 3 6420 6761 42121407 42121062 1.380000e-151 547
11 TraesCS4B01G253000 chr4A 95.050 101 5 0 6298 6398 42121978 42121878 7.530000e-35 159
12 TraesCS4B01G253000 chr4D 95.351 1936 67 6 4152 6069 421894418 421896348 0.000000e+00 3055
13 TraesCS4B01G253000 chr4D 93.824 1360 59 12 795 2143 421890990 421892335 0.000000e+00 2023
14 TraesCS4B01G253000 chr4D 92.308 1261 41 23 2140 3354 421892700 421893950 0.000000e+00 1740
15 TraesCS4B01G253000 chr4D 95.968 620 19 4 3353 3971 421893822 421894436 0.000000e+00 1002
16 TraesCS4B01G253000 chr4D 88.797 482 36 8 6781 7255 421950561 421951031 6.310000e-160 575
17 TraesCS4B01G253000 chr4D 96.154 338 13 0 6063 6400 421896517 421896854 2.960000e-153 553
18 TraesCS4B01G253000 chr4D 93.834 373 14 3 6392 6761 421897277 421897643 2.960000e-153 553
19 TraesCS4B01G253000 chr4D 94.403 268 13 1 6761 7026 421897608 421897875 1.880000e-110 411
20 TraesCS4B01G253000 chr4D 92.405 237 15 1 7022 7255 421924093 421924329 1.170000e-87 335
21 TraesCS4B01G253000 chr7B 89.910 664 63 4 1 661 493363606 493364268 0.000000e+00 852
22 TraesCS4B01G253000 chr7B 84.337 664 70 10 14 663 4370732 4370089 2.880000e-173 619
23 TraesCS4B01G253000 chr6B 88.278 691 63 15 1 683 450804477 450805157 0.000000e+00 811
24 TraesCS4B01G253000 chr6B 87.237 666 74 5 1 659 293978303 293977642 0.000000e+00 749
25 TraesCS4B01G253000 chr6B 82.985 670 69 31 9 664 703108210 703107572 1.370000e-156 564
26 TraesCS4B01G253000 chr3B 88.889 657 68 5 1 653 81835229 81835884 0.000000e+00 804
27 TraesCS4B01G253000 chr2B 87.820 665 57 13 1 661 696367983 696368627 0.000000e+00 758
28 TraesCS4B01G253000 chr2B 97.396 192 4 1 3958 4148 191540795 191540604 7.020000e-85 326
29 TraesCS4B01G253000 chr2B 73.950 357 55 26 1967 2309 436993312 436993644 7.700000e-20 110
30 TraesCS4B01G253000 chr2D 86.885 671 60 16 1 661 378545643 378546295 0.000000e+00 726
31 TraesCS4B01G253000 chrUn 88.918 379 37 5 276 651 23963525 23963901 5.130000e-126 462
32 TraesCS4B01G253000 chr1B 99.462 186 1 0 3970 4155 135935677 135935862 9.020000e-89 339
33 TraesCS4B01G253000 chr1B 97.382 191 4 1 3958 4148 191708854 191709043 2.520000e-84 324
34 TraesCS4B01G253000 chr1A 97.030 202 3 3 3948 4148 393958479 393958678 3.240000e-88 337
35 TraesCS4B01G253000 chr5A 98.404 188 3 0 3966 4153 601510592 601510779 1.510000e-86 331
36 TraesCS4B01G253000 chr5A 96.923 195 4 2 3954 4148 491241220 491241028 7.020000e-85 326
37 TraesCS4B01G253000 chr2A 99.451 182 1 0 3967 4148 385446606 385446425 1.510000e-86 331


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G253000 chr4B 518870437 518877691 7254 False 13398.000000 13398 100.000000 1 7255 1 chr4B.!!$F1 7254
1 TraesCS4B01G253000 chr4B 554832499 554833031 532 False 592.000000 592 86.861000 79 618 1 chr4B.!!$F2 539
2 TraesCS4B01G253000 chr4A 42120599 42127529 6930 True 1326.857143 3275 93.531857 661 7255 7 chr4A.!!$R1 6594
3 TraesCS4B01G253000 chr4A 702776366 702776942 576 False 684.000000 684 88.256000 93 663 1 chr4A.!!$F1 570
4 TraesCS4B01G253000 chr4D 421890990 421897875 6885 False 1333.857143 3055 94.548857 795 7026 7 chr4D.!!$F3 6231
5 TraesCS4B01G253000 chr7B 493363606 493364268 662 False 852.000000 852 89.910000 1 661 1 chr7B.!!$F1 660
6 TraesCS4B01G253000 chr7B 4370089 4370732 643 True 619.000000 619 84.337000 14 663 1 chr7B.!!$R1 649
7 TraesCS4B01G253000 chr6B 450804477 450805157 680 False 811.000000 811 88.278000 1 683 1 chr6B.!!$F1 682
8 TraesCS4B01G253000 chr6B 293977642 293978303 661 True 749.000000 749 87.237000 1 659 1 chr6B.!!$R1 658
9 TraesCS4B01G253000 chr6B 703107572 703108210 638 True 564.000000 564 82.985000 9 664 1 chr6B.!!$R2 655
10 TraesCS4B01G253000 chr3B 81835229 81835884 655 False 804.000000 804 88.889000 1 653 1 chr3B.!!$F1 652
11 TraesCS4B01G253000 chr2B 696367983 696368627 644 False 758.000000 758 87.820000 1 661 1 chr2B.!!$F2 660
12 TraesCS4B01G253000 chr2D 378545643 378546295 652 False 726.000000 726 86.885000 1 661 1 chr2D.!!$F1 660

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
664 722 0.249657 CGGCTGGAGATGCTCTTACC 60.250 60.0 0.00 0.00 0.00 2.85 F
1493 1708 0.320683 GCATTTGCTTGGTGGGTTCC 60.321 55.0 0.00 0.00 38.21 3.62 F
1949 2164 0.744771 GTTCCTTCGACCTGGGATGC 60.745 60.0 0.00 0.00 0.00 3.91 F
3273 3906 0.951558 GTGTCGCCACTCAAACCATT 59.048 50.0 0.00 0.00 38.61 3.16 F
4007 4643 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.0 12.44 8.34 40.80 4.35 F
4009 4645 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.0 12.44 0.00 40.80 3.16 F
4010 4646 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.0 12.44 0.00 40.80 3.33 F
4077 4713 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.0 0.00 0.00 37.28 3.67 F
5644 6297 0.516001 GTGACAGTACGTCTCGCTGA 59.484 55.0 15.47 0.00 45.60 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1899 2114 0.597637 CACCCTAACAGATAGCGGCG 60.598 60.000 0.51 0.51 0.00 6.46 R
3360 3993 0.040781 GGCGACGCTAGCAAAAACAA 60.041 50.000 20.77 0.00 36.08 2.83 R
3362 3995 0.168128 ATGGCGACGCTAGCAAAAAC 59.832 50.000 20.77 2.10 36.08 2.43 R
5129 5781 0.452987 CATTGGGACCAATCTGCGTG 59.547 55.000 13.45 0.00 43.92 5.34 R
5744 6397 1.270252 CCAAGTTTGGCATTGTGGTCC 60.270 52.381 0.00 0.00 42.21 4.46 R
6125 6953 8.750515 AAATTACACCATATCACATCACATGA 57.249 30.769 0.00 0.00 0.00 3.07 R
6152 6981 7.335422 AGTGAACTTGATACCAGAATGCTAAAG 59.665 37.037 0.00 0.00 31.97 1.85 R
6175 7004 5.989168 TGTTTGTACAATCTCTACACCAGTG 59.011 40.000 9.56 0.00 0.00 3.66 R
6764 8145 0.179000 CGGGCCTAAGCAGAATCAGT 59.821 55.000 0.84 0.00 42.56 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 4.424711 GCCGGGATGTTGGCCTGA 62.425 66.667 3.32 0.00 45.73 3.86
193 207 3.717294 GAAAGGGAGGGCTCGGCA 61.717 66.667 0.00 0.00 0.00 5.69
231 247 3.224324 CTCGGCGGCTAGGGCTTA 61.224 66.667 7.21 0.00 38.73 3.09
589 646 4.671590 TCCTGGGGACGCGACTGA 62.672 66.667 15.93 0.00 0.00 3.41
664 722 0.249657 CGGCTGGAGATGCTCTTACC 60.250 60.000 0.00 0.00 0.00 2.85
726 784 7.201410 CGAGTATTTGCGATTGTACTGTACTTT 60.201 37.037 17.98 6.27 0.00 2.66
728 786 9.426837 AGTATTTGCGATTGTACTGTACTTTAA 57.573 29.630 17.98 5.71 0.00 1.52
792 851 1.829222 TGTCCTTATCACGGGAACTCC 59.171 52.381 0.00 0.00 33.01 3.85
813 875 6.213600 ACTCCAAACTCCAAAAGCTAGAGATA 59.786 38.462 9.28 0.00 0.00 1.98
841 903 1.285950 GTGGGAAGCAAAACTCCGC 59.714 57.895 0.00 0.00 0.00 5.54
889 957 3.434179 AACCCACCAGGCCACCAA 61.434 61.111 5.01 0.00 40.58 3.67
915 983 2.731348 GTCGCTCGATGCCGGATC 60.731 66.667 5.05 4.59 38.78 3.36
984 1052 0.671251 GAGCCTACCATCGTCTCCAG 59.329 60.000 0.00 0.00 0.00 3.86
1009 1077 2.186160 TTCACCAGCGCCAACACAG 61.186 57.895 2.29 0.00 0.00 3.66
1115 1201 0.807667 CCTCGCCTCAAATCTCACCG 60.808 60.000 0.00 0.00 0.00 4.94
1235 1322 2.186644 CCGTCATCATGGTCGGCA 59.813 61.111 8.73 0.00 36.68 5.69
1255 1342 2.744709 CCCACCAAAGGTACGCCG 60.745 66.667 0.00 0.00 40.50 6.46
1335 1542 0.750182 AACTGTCCGGTGGTTGGTTG 60.750 55.000 0.00 0.00 0.00 3.77
1493 1708 0.320683 GCATTTGCTTGGTGGGTTCC 60.321 55.000 0.00 0.00 38.21 3.62
1531 1746 3.074412 TGAGAATTGAGGCCTTTTCGAC 58.926 45.455 6.77 10.95 0.00 4.20
1671 1886 3.953775 CGTGCCCTCCCCAACACT 61.954 66.667 0.00 0.00 0.00 3.55
1673 1888 1.152546 GTGCCCTCCCCAACACTTT 60.153 57.895 0.00 0.00 0.00 2.66
1681 1896 3.490348 CTCCCCAACACTTTCACTTCAT 58.510 45.455 0.00 0.00 0.00 2.57
1697 1912 3.507622 ACTTCATTTCCTGCCAGTTTAGC 59.492 43.478 0.00 0.00 0.00 3.09
1949 2164 0.744771 GTTCCTTCGACCTGGGATGC 60.745 60.000 0.00 0.00 0.00 3.91
1950 2165 1.910580 TTCCTTCGACCTGGGATGCC 61.911 60.000 0.00 0.00 0.00 4.40
1954 2169 1.198094 TTCGACCTGGGATGCCTGAA 61.198 55.000 11.91 2.04 0.00 3.02
2009 2224 6.371825 AGGATTCGAAAACACAAGAATAGGTC 59.628 38.462 0.00 0.00 33.95 3.85
2056 2271 7.774134 TGACATTTGGAATCCTACATTGAATG 58.226 34.615 3.16 3.16 0.00 2.67
2210 2798 7.038017 CCTCTTGCTAGGAATCCTATGGAATAA 60.038 40.741 9.80 3.35 39.15 1.40
2348 2946 7.712639 TGTAAATTCTCTGAGAGATATGCAACC 59.287 37.037 13.70 0.00 38.56 3.77
2410 3014 3.497332 GGGAACTTTTGCCCTCTAAAGT 58.503 45.455 0.00 0.00 45.47 2.66
2414 3018 3.497332 ACTTTTGCCCTCTAAAGTTCCC 58.503 45.455 0.00 0.00 42.62 3.97
2416 3020 3.895704 TTTGCCCTCTAAAGTTCCCTT 57.104 42.857 0.00 0.00 0.00 3.95
2417 3021 5.163023 ACTTTTGCCCTCTAAAGTTCCCTTA 60.163 40.000 0.00 0.00 42.62 2.69
2418 3022 5.530176 TTTGCCCTCTAAAGTTCCCTTAT 57.470 39.130 0.00 0.00 0.00 1.73
2419 3023 6.645884 TTTGCCCTCTAAAGTTCCCTTATA 57.354 37.500 0.00 0.00 0.00 0.98
2525 3130 2.040278 AGTAGCTGAAGTTGGGATTGCA 59.960 45.455 0.00 0.00 0.00 4.08
2526 3131 2.226962 AGCTGAAGTTGGGATTGCAT 57.773 45.000 0.00 0.00 0.00 3.96
2527 3132 2.532843 AGCTGAAGTTGGGATTGCATT 58.467 42.857 0.00 0.00 0.00 3.56
2528 3133 2.232941 AGCTGAAGTTGGGATTGCATTG 59.767 45.455 0.00 0.00 0.00 2.82
2593 3203 5.237815 TCATCGCTAAATGTATCACCATCC 58.762 41.667 0.00 0.00 0.00 3.51
2598 3208 4.452455 GCTAAATGTATCACCATCCCTTCG 59.548 45.833 0.00 0.00 0.00 3.79
2655 3265 4.695455 GCACTTTGCTAGTCAATAAGGTGA 59.305 41.667 0.00 0.00 40.96 4.02
2879 3490 4.990426 AGTGCTGATTATTTGTTGTTTGGC 59.010 37.500 0.00 0.00 0.00 4.52
2920 3531 6.350361 CCATTTGGAGAATTGTGCATGTCTTA 60.350 38.462 0.00 0.00 37.39 2.10
2921 3532 6.839124 TTTGGAGAATTGTGCATGTCTTAT 57.161 33.333 0.00 0.00 0.00 1.73
2922 3533 6.839124 TTGGAGAATTGTGCATGTCTTATT 57.161 33.333 0.00 0.00 0.00 1.40
3112 3744 7.561722 AGAAAGACAGAGGTATTATGCTCAGTA 59.438 37.037 0.00 0.00 0.00 2.74
3213 3846 6.150307 TCGCTACTAATTTTTGCCTCATTTCA 59.850 34.615 0.00 0.00 0.00 2.69
3251 3884 5.309652 CGTGAGGTATGTTTTGTTTTTGC 57.690 39.130 0.00 0.00 0.00 3.68
3252 3885 5.040635 CGTGAGGTATGTTTTGTTTTTGCT 58.959 37.500 0.00 0.00 0.00 3.91
3253 3886 6.202937 CGTGAGGTATGTTTTGTTTTTGCTA 58.797 36.000 0.00 0.00 0.00 3.49
3254 3887 6.359617 CGTGAGGTATGTTTTGTTTTTGCTAG 59.640 38.462 0.00 0.00 0.00 3.42
3255 3888 7.200455 GTGAGGTATGTTTTGTTTTTGCTAGT 58.800 34.615 0.00 0.00 0.00 2.57
3256 3889 7.167468 GTGAGGTATGTTTTGTTTTTGCTAGTG 59.833 37.037 0.00 0.00 0.00 2.74
3257 3890 7.107639 AGGTATGTTTTGTTTTTGCTAGTGT 57.892 32.000 0.00 0.00 0.00 3.55
3258 3891 7.200455 AGGTATGTTTTGTTTTTGCTAGTGTC 58.800 34.615 0.00 0.00 0.00 3.67
3259 3892 6.141685 GGTATGTTTTGTTTTTGCTAGTGTCG 59.858 38.462 0.00 0.00 0.00 4.35
3260 3893 3.854809 TGTTTTGTTTTTGCTAGTGTCGC 59.145 39.130 0.00 0.00 0.00 5.19
3261 3894 2.766970 TTGTTTTTGCTAGTGTCGCC 57.233 45.000 0.00 0.00 0.00 5.54
3262 3895 1.669604 TGTTTTTGCTAGTGTCGCCA 58.330 45.000 0.00 0.00 0.00 5.69
3263 3896 1.332375 TGTTTTTGCTAGTGTCGCCAC 59.668 47.619 0.00 0.00 42.17 5.01
3271 3904 4.134623 GTGTCGCCACTCAAACCA 57.865 55.556 0.00 0.00 38.61 3.67
3272 3905 2.629002 GTGTCGCCACTCAAACCAT 58.371 52.632 0.00 0.00 38.61 3.55
3273 3906 0.951558 GTGTCGCCACTCAAACCATT 59.048 50.000 0.00 0.00 38.61 3.16
3274 3907 2.147958 GTGTCGCCACTCAAACCATTA 58.852 47.619 0.00 0.00 38.61 1.90
3275 3908 2.159627 GTGTCGCCACTCAAACCATTAG 59.840 50.000 0.00 0.00 38.61 1.73
3276 3909 2.224426 TGTCGCCACTCAAACCATTAGT 60.224 45.455 0.00 0.00 0.00 2.24
3277 3910 2.415512 GTCGCCACTCAAACCATTAGTC 59.584 50.000 0.00 0.00 0.00 2.59
3278 3911 2.037902 TCGCCACTCAAACCATTAGTCA 59.962 45.455 0.00 0.00 0.00 3.41
3279 3912 2.811431 CGCCACTCAAACCATTAGTCAA 59.189 45.455 0.00 0.00 0.00 3.18
3280 3913 3.252215 CGCCACTCAAACCATTAGTCAAA 59.748 43.478 0.00 0.00 0.00 2.69
3281 3914 4.613622 CGCCACTCAAACCATTAGTCAAAG 60.614 45.833 0.00 0.00 0.00 2.77
3282 3915 4.518970 GCCACTCAAACCATTAGTCAAAGA 59.481 41.667 0.00 0.00 0.00 2.52
3283 3916 5.335191 GCCACTCAAACCATTAGTCAAAGAG 60.335 44.000 0.00 0.00 0.00 2.85
3284 3917 5.182001 CCACTCAAACCATTAGTCAAAGAGG 59.818 44.000 0.00 0.00 0.00 3.69
3285 3918 5.765182 CACTCAAACCATTAGTCAAAGAGGT 59.235 40.000 0.00 0.00 32.39 3.85
3286 3919 6.263168 CACTCAAACCATTAGTCAAAGAGGTT 59.737 38.462 0.00 0.00 39.70 3.50
3287 3920 6.486993 ACTCAAACCATTAGTCAAAGAGGTTC 59.513 38.462 0.00 0.00 38.04 3.62
3288 3921 5.768164 TCAAACCATTAGTCAAAGAGGTTCC 59.232 40.000 0.00 0.00 38.04 3.62
3289 3922 4.993705 ACCATTAGTCAAAGAGGTTCCA 57.006 40.909 0.00 0.00 0.00 3.53
3290 3923 4.911390 ACCATTAGTCAAAGAGGTTCCAG 58.089 43.478 0.00 0.00 0.00 3.86
3291 3924 4.351111 ACCATTAGTCAAAGAGGTTCCAGT 59.649 41.667 0.00 0.00 0.00 4.00
3292 3925 5.163088 ACCATTAGTCAAAGAGGTTCCAGTT 60.163 40.000 0.00 0.00 0.00 3.16
3293 3926 5.182001 CCATTAGTCAAAGAGGTTCCAGTTG 59.818 44.000 0.00 0.00 0.00 3.16
3294 3927 5.623956 TTAGTCAAAGAGGTTCCAGTTGA 57.376 39.130 0.00 0.00 0.00 3.18
3295 3928 4.503714 AGTCAAAGAGGTTCCAGTTGAA 57.496 40.909 0.00 0.00 30.49 2.69
3308 3941 6.522625 TTCCAGTTGAACAAAATTCTGACA 57.477 33.333 0.00 0.00 0.00 3.58
3309 3942 6.135290 TCCAGTTGAACAAAATTCTGACAG 57.865 37.500 0.00 0.00 0.00 3.51
3310 3943 4.741676 CCAGTTGAACAAAATTCTGACAGC 59.258 41.667 0.00 0.00 0.00 4.40
3311 3944 5.450965 CCAGTTGAACAAAATTCTGACAGCT 60.451 40.000 0.00 0.00 0.00 4.24
3312 3945 6.038356 CAGTTGAACAAAATTCTGACAGCTT 58.962 36.000 0.00 0.00 0.00 3.74
3313 3946 6.020121 CAGTTGAACAAAATTCTGACAGCTTG 60.020 38.462 0.00 1.78 0.00 4.01
3314 3947 4.935702 TGAACAAAATTCTGACAGCTTGG 58.064 39.130 0.00 0.00 0.00 3.61
3315 3948 4.402155 TGAACAAAATTCTGACAGCTTGGT 59.598 37.500 0.00 0.00 0.00 3.67
3316 3949 4.311816 ACAAAATTCTGACAGCTTGGTG 57.688 40.909 0.00 0.00 0.00 4.17
3317 3950 3.953612 ACAAAATTCTGACAGCTTGGTGA 59.046 39.130 6.83 0.00 0.00 4.02
3318 3951 4.202050 ACAAAATTCTGACAGCTTGGTGAC 60.202 41.667 6.83 1.21 0.00 3.67
3319 3952 2.936919 ATTCTGACAGCTTGGTGACA 57.063 45.000 6.83 5.88 39.83 3.58
3320 3953 2.936919 TTCTGACAGCTTGGTGACAT 57.063 45.000 6.83 0.00 42.32 3.06
3321 3954 4.558226 ATTCTGACAGCTTGGTGACATA 57.442 40.909 6.83 0.00 42.32 2.29
3322 3955 3.319137 TCTGACAGCTTGGTGACATAC 57.681 47.619 6.83 0.00 42.32 2.39
3323 3956 2.632512 TCTGACAGCTTGGTGACATACA 59.367 45.455 6.83 0.00 42.32 2.29
3324 3957 3.070878 TCTGACAGCTTGGTGACATACAA 59.929 43.478 6.83 0.00 42.32 2.41
3325 3958 3.814625 TGACAGCTTGGTGACATACAAA 58.185 40.909 6.83 0.00 42.32 2.83
3326 3959 4.397420 TGACAGCTTGGTGACATACAAAT 58.603 39.130 6.83 0.00 42.32 2.32
3327 3960 4.826733 TGACAGCTTGGTGACATACAAATT 59.173 37.500 6.83 0.00 42.32 1.82
3328 3961 5.301551 TGACAGCTTGGTGACATACAAATTT 59.698 36.000 6.83 0.00 42.32 1.82
3329 3962 5.531634 ACAGCTTGGTGACATACAAATTTG 58.468 37.500 16.67 16.67 42.32 2.32
3330 3963 5.301551 ACAGCTTGGTGACATACAAATTTGA 59.698 36.000 24.64 8.78 42.32 2.69
3331 3964 5.860182 CAGCTTGGTGACATACAAATTTGAG 59.140 40.000 24.64 15.03 42.32 3.02
3332 3965 5.769662 AGCTTGGTGACATACAAATTTGAGA 59.230 36.000 24.64 12.00 42.32 3.27
3333 3966 6.072286 AGCTTGGTGACATACAAATTTGAGAG 60.072 38.462 24.64 14.39 42.32 3.20
3334 3967 6.072508 GCTTGGTGACATACAAATTTGAGAGA 60.073 38.462 24.64 7.17 42.32 3.10
3335 3968 7.439157 TTGGTGACATACAAATTTGAGAGAG 57.561 36.000 24.64 11.20 42.32 3.20
3336 3969 6.533730 TGGTGACATACAAATTTGAGAGAGT 58.466 36.000 24.64 13.98 33.40 3.24
3337 3970 7.676004 TGGTGACATACAAATTTGAGAGAGTA 58.324 34.615 24.64 5.84 33.40 2.59
3338 3971 8.321353 TGGTGACATACAAATTTGAGAGAGTAT 58.679 33.333 24.64 7.90 33.40 2.12
3339 3972 9.817809 GGTGACATACAAATTTGAGAGAGTATA 57.182 33.333 24.64 4.40 0.00 1.47
3353 3986 9.491675 TTGAGAGAGTATATTAGTTCTAGTCGG 57.508 37.037 0.00 0.00 0.00 4.79
3354 3987 7.603404 TGAGAGAGTATATTAGTTCTAGTCGGC 59.397 40.741 0.00 0.00 0.00 5.54
3355 3988 7.451732 AGAGAGTATATTAGTTCTAGTCGGCA 58.548 38.462 0.00 0.00 0.00 5.69
3356 3989 8.104566 AGAGAGTATATTAGTTCTAGTCGGCAT 58.895 37.037 0.00 0.00 0.00 4.40
3357 3990 8.046294 AGAGTATATTAGTTCTAGTCGGCATG 57.954 38.462 0.00 0.00 0.00 4.06
3358 3991 7.666388 AGAGTATATTAGTTCTAGTCGGCATGT 59.334 37.037 0.00 0.00 0.00 3.21
3359 3992 8.179509 AGTATATTAGTTCTAGTCGGCATGTT 57.820 34.615 0.00 0.00 0.00 2.71
3360 3993 8.639761 AGTATATTAGTTCTAGTCGGCATGTTT 58.360 33.333 0.00 0.00 0.00 2.83
3361 3994 9.257651 GTATATTAGTTCTAGTCGGCATGTTTT 57.742 33.333 0.00 0.00 0.00 2.43
3362 3995 5.856126 TTAGTTCTAGTCGGCATGTTTTG 57.144 39.130 0.00 0.00 0.00 2.44
3363 3996 3.740115 AGTTCTAGTCGGCATGTTTTGT 58.260 40.909 0.00 0.00 0.00 2.83
3364 3997 4.134563 AGTTCTAGTCGGCATGTTTTGTT 58.865 39.130 0.00 0.00 0.00 2.83
3365 3998 4.578928 AGTTCTAGTCGGCATGTTTTGTTT 59.421 37.500 0.00 0.00 0.00 2.83
3366 3999 5.067283 AGTTCTAGTCGGCATGTTTTGTTTT 59.933 36.000 0.00 0.00 0.00 2.43
3374 4007 3.362888 GGCATGTTTTGTTTTTGCTAGCG 60.363 43.478 10.77 0.00 33.86 4.26
3456 4089 6.488344 TGACTGCTTGGTGACATACAAATTTA 59.512 34.615 0.00 0.00 42.32 1.40
3460 4093 7.592938 TGCTTGGTGACATACAAATTTAAGAG 58.407 34.615 0.00 0.00 42.32 2.85
3669 4302 8.203485 TCATTTTCCTGCATATTTATTTGGGTC 58.797 33.333 0.00 0.00 0.00 4.46
3733 4367 8.006298 TGGAAATCATCGGTGCTATTTTAAAT 57.994 30.769 0.00 0.00 0.00 1.40
3780 4414 2.507484 TGCATCACCAGGAAGTTGAAG 58.493 47.619 0.00 0.00 0.00 3.02
3974 4610 9.605275 TTCACTTTCATGATACTGATAAGAAGG 57.395 33.333 7.81 0.00 0.00 3.46
3975 4611 8.206867 TCACTTTCATGATACTGATAAGAAGGG 58.793 37.037 7.81 1.13 0.00 3.95
3976 4612 7.443575 CACTTTCATGATACTGATAAGAAGGGG 59.556 40.741 7.81 0.00 0.00 4.79
3977 4613 7.348274 ACTTTCATGATACTGATAAGAAGGGGA 59.652 37.037 7.81 0.00 0.00 4.81
3978 4614 6.924913 TCATGATACTGATAAGAAGGGGAG 57.075 41.667 0.00 0.00 0.00 4.30
3979 4615 5.247110 TCATGATACTGATAAGAAGGGGAGC 59.753 44.000 0.00 0.00 0.00 4.70
3980 4616 3.904339 TGATACTGATAAGAAGGGGAGCC 59.096 47.826 0.00 0.00 0.00 4.70
3981 4617 2.577772 ACTGATAAGAAGGGGAGCCT 57.422 50.000 0.00 0.00 0.00 4.58
3982 4618 2.852130 ACTGATAAGAAGGGGAGCCTT 58.148 47.619 0.00 0.00 0.00 4.35
3983 4619 2.507471 ACTGATAAGAAGGGGAGCCTTG 59.493 50.000 0.00 0.00 0.00 3.61
3984 4620 1.846439 TGATAAGAAGGGGAGCCTTGG 59.154 52.381 0.00 0.00 0.00 3.61
3985 4621 0.553333 ATAAGAAGGGGAGCCTTGGC 59.447 55.000 2.97 2.97 0.00 4.52
3986 4622 1.910580 TAAGAAGGGGAGCCTTGGCG 61.911 60.000 5.95 0.00 0.00 5.69
3994 4630 3.605749 GAGCCTTGGCGCAGTGGTA 62.606 63.158 10.83 0.00 0.00 3.25
3995 4631 2.671619 GCCTTGGCGCAGTGGTAA 60.672 61.111 10.83 0.00 0.00 2.85
3996 4632 2.265182 GCCTTGGCGCAGTGGTAAA 61.265 57.895 10.83 0.00 0.00 2.01
3997 4633 1.875963 CCTTGGCGCAGTGGTAAAG 59.124 57.895 10.83 0.71 0.00 1.85
3998 4634 1.210155 CTTGGCGCAGTGGTAAAGC 59.790 57.895 10.83 0.00 0.00 3.51
3999 4635 1.228124 TTGGCGCAGTGGTAAAGCT 60.228 52.632 10.83 0.00 0.00 3.74
4000 4636 1.514678 TTGGCGCAGTGGTAAAGCTG 61.515 55.000 10.83 0.00 35.93 4.24
4005 4641 1.878775 CAGTGGTAAAGCTGCTGCC 59.121 57.895 12.44 7.07 40.80 4.85
4006 4642 0.607489 CAGTGGTAAAGCTGCTGCCT 60.607 55.000 12.44 2.45 40.80 4.75
4007 4643 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35
4008 4644 0.242017 GTGGTAAAGCTGCTGCCTTG 59.758 55.000 12.44 0.00 40.80 3.61
4009 4645 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16
4010 4646 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.000 12.44 0.00 40.80 3.33
4011 4647 1.238439 GTAAAGCTGCTGCCTTGTGA 58.762 50.000 12.44 0.00 40.80 3.58
4012 4648 1.068954 GTAAAGCTGCTGCCTTGTGAC 60.069 52.381 12.44 0.00 40.80 3.67
4013 4649 1.458639 AAAGCTGCTGCCTTGTGACC 61.459 55.000 12.44 0.00 40.80 4.02
4014 4650 2.595463 GCTGCTGCCTTGTGACCA 60.595 61.111 3.85 0.00 0.00 4.02
4015 4651 1.975407 GCTGCTGCCTTGTGACCAT 60.975 57.895 3.85 0.00 0.00 3.55
4016 4652 1.880894 CTGCTGCCTTGTGACCATG 59.119 57.895 0.00 0.00 0.00 3.66
4017 4653 0.607217 CTGCTGCCTTGTGACCATGA 60.607 55.000 0.00 0.00 0.00 3.07
4018 4654 0.607217 TGCTGCCTTGTGACCATGAG 60.607 55.000 0.00 0.00 0.00 2.90
4019 4655 1.310933 GCTGCCTTGTGACCATGAGG 61.311 60.000 0.00 0.00 42.21 3.86
4034 4670 2.859165 TGAGGTCATGGGTTCAAGTC 57.141 50.000 0.00 0.00 0.00 3.01
4035 4671 1.351017 TGAGGTCATGGGTTCAAGTCC 59.649 52.381 0.00 0.00 0.00 3.85
4036 4672 1.630878 GAGGTCATGGGTTCAAGTCCT 59.369 52.381 0.00 0.00 0.00 3.85
4037 4673 1.352352 AGGTCATGGGTTCAAGTCCTG 59.648 52.381 0.00 0.00 0.00 3.86
4038 4674 1.614317 GGTCATGGGTTCAAGTCCTGG 60.614 57.143 0.00 0.00 0.00 4.45
4039 4675 1.351017 GTCATGGGTTCAAGTCCTGGA 59.649 52.381 0.00 0.00 0.00 3.86
4040 4676 2.061848 TCATGGGTTCAAGTCCTGGAA 58.938 47.619 0.00 0.00 0.00 3.53
4041 4677 2.445145 TCATGGGTTCAAGTCCTGGAAA 59.555 45.455 0.00 0.00 0.00 3.13
4042 4678 2.358322 TGGGTTCAAGTCCTGGAAAC 57.642 50.000 0.00 0.00 0.00 2.78
4043 4679 1.566703 TGGGTTCAAGTCCTGGAAACA 59.433 47.619 0.00 0.00 32.36 2.83
4057 4693 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
4058 4694 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
4059 4695 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
4060 4696 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
4061 4697 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
4062 4698 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
4063 4699 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
4064 4700 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
4065 4701 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
4066 4702 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
4067 4703 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
4068 4704 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
4069 4705 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
4070 4706 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
4071 4707 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
4072 4708 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
4073 4709 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
4074 4710 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
4075 4711 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
4076 4712 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
4077 4713 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
4078 4714 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
4079 4715 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
4080 4716 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
4081 4717 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
4082 4718 3.240302 AGGGAAAGGCTGCGTACTATAT 58.760 45.455 0.00 0.00 0.00 0.86
4083 4719 4.413760 AGGGAAAGGCTGCGTACTATATA 58.586 43.478 0.00 0.00 0.00 0.86
4084 4720 4.220163 AGGGAAAGGCTGCGTACTATATAC 59.780 45.833 0.00 0.00 0.00 1.47
4085 4721 4.492611 GGAAAGGCTGCGTACTATATACC 58.507 47.826 0.00 0.00 0.00 2.73
4086 4722 4.492611 GAAAGGCTGCGTACTATATACCC 58.507 47.826 0.00 0.00 0.00 3.69
4087 4723 3.165087 AGGCTGCGTACTATATACCCA 57.835 47.619 0.00 0.00 0.00 4.51
4088 4724 3.503365 AGGCTGCGTACTATATACCCAA 58.497 45.455 0.00 0.00 0.00 4.12
4089 4725 3.899360 AGGCTGCGTACTATATACCCAAA 59.101 43.478 0.00 0.00 0.00 3.28
4090 4726 4.021368 AGGCTGCGTACTATATACCCAAAG 60.021 45.833 0.00 0.00 0.00 2.77
4091 4727 4.262335 GGCTGCGTACTATATACCCAAAGT 60.262 45.833 0.00 0.00 0.00 2.66
4092 4728 4.684703 GCTGCGTACTATATACCCAAAGTG 59.315 45.833 0.00 0.00 0.00 3.16
4093 4729 5.204409 TGCGTACTATATACCCAAAGTGG 57.796 43.478 0.00 0.00 37.25 4.00
4094 4730 4.650588 TGCGTACTATATACCCAAAGTGGT 59.349 41.667 0.00 0.00 42.62 4.16
4095 4731 5.221303 TGCGTACTATATACCCAAAGTGGTC 60.221 44.000 0.00 0.00 39.91 4.02
4096 4732 5.455392 CGTACTATATACCCAAAGTGGTCG 58.545 45.833 0.00 0.00 39.91 4.79
4097 4733 4.950205 ACTATATACCCAAAGTGGTCGG 57.050 45.455 0.00 0.00 39.91 4.79
4098 4734 4.549668 ACTATATACCCAAAGTGGTCGGA 58.450 43.478 0.00 0.00 39.91 4.55
4099 4735 3.832615 ATATACCCAAAGTGGTCGGAC 57.167 47.619 0.00 0.00 39.91 4.79
4100 4736 0.616891 ATACCCAAAGTGGTCGGACC 59.383 55.000 20.36 20.36 39.91 4.46
4101 4737 1.482748 TACCCAAAGTGGTCGGACCC 61.483 60.000 23.81 14.91 39.91 4.46
4102 4738 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
4103 4739 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
4104 4740 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
4105 4741 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
4106 4742 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
4107 4743 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
4108 4744 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
4109 4745 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
4110 4746 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
4111 4747 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
4112 4748 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
4113 4749 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
4114 4750 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
4115 4751 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
4116 4752 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
4117 4753 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
4118 4754 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
4143 4779 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
4144 4780 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
4145 4781 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
4146 4782 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
4147 4783 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
4148 4784 2.779742 TACATGCACCAGGTTGCCCC 62.780 60.000 10.46 0.00 42.25 5.80
4149 4785 4.702274 ATGCACCAGGTTGCCCCC 62.702 66.667 10.46 0.00 42.25 5.40
4172 4808 7.922382 CCCCCTTTCATGATACTGATAAGTAT 58.078 38.462 1.99 1.99 37.66 2.12
4196 4832 3.051081 ACTGATGTCCTTGTCTTGCTC 57.949 47.619 0.00 0.00 0.00 4.26
4208 4844 2.906389 TGTCTTGCTCTACCTCCAATGT 59.094 45.455 0.00 0.00 0.00 2.71
4212 4848 4.761739 TCTTGCTCTACCTCCAATGTTTTG 59.238 41.667 0.00 0.00 0.00 2.44
4269 4905 5.065235 CACATGGATTGCTACCACATCATA 58.935 41.667 0.00 0.00 40.36 2.15
4274 4910 6.545567 TGGATTGCTACCACATCATATCATT 58.454 36.000 0.00 0.00 32.03 2.57
4310 4946 4.681744 TGTTTGCCATGTTTTCTGAAGTC 58.318 39.130 0.00 0.00 0.00 3.01
4432 5068 5.240891 AGAATATGTCTTACATGGCCATCG 58.759 41.667 17.61 14.17 39.53 3.84
4470 5106 5.443230 AGAAAAGAAATGGGTAGGAGGAG 57.557 43.478 0.00 0.00 0.00 3.69
4482 5122 4.573087 GGGTAGGAGGAGTAGCCATCATAT 60.573 50.000 0.00 0.00 37.87 1.78
4535 5175 3.007506 TCTTCTATCGTTGTTGGCCTGAA 59.992 43.478 3.32 0.00 0.00 3.02
4568 5208 8.033038 CCTGTATCTAGCAATACGGCTATTTTA 58.967 37.037 5.31 0.00 44.78 1.52
4597 5237 8.118976 TCTCGTTAGTTCTTCCAAGAAATCTA 57.881 34.615 5.33 1.30 45.77 1.98
4598 5238 8.582437 TCTCGTTAGTTCTTCCAAGAAATCTAA 58.418 33.333 5.33 6.65 45.77 2.10
4815 5455 5.465724 CAGGGTAAATATAGTTCTTGACGGC 59.534 44.000 0.00 0.00 0.00 5.68
4994 5634 2.138320 GTGTACATCCATCCATCTGCG 58.862 52.381 0.00 0.00 0.00 5.18
5129 5781 9.874215 GGTTTTATCTTTTTATACGCTATCCAC 57.126 33.333 0.00 0.00 0.00 4.02
5388 6041 6.534079 ACGTGTACAGGCAAGATTTTCTATAC 59.466 38.462 15.25 0.00 0.00 1.47
5389 6042 6.533723 CGTGTACAGGCAAGATTTTCTATACA 59.466 38.462 2.09 0.00 0.00 2.29
5392 6045 8.046708 TGTACAGGCAAGATTTTCTATACATGT 58.953 33.333 2.69 2.69 0.00 3.21
5395 6048 8.893727 ACAGGCAAGATTTTCTATACATGTTAC 58.106 33.333 2.30 0.00 0.00 2.50
5397 6050 8.275040 AGGCAAGATTTTCTATACATGTTACCT 58.725 33.333 2.30 0.00 0.00 3.08
5484 6137 3.937706 CTGATGTTTCTGTTCTAGCCCAG 59.062 47.826 2.93 2.93 0.00 4.45
5496 6149 5.248477 TGTTCTAGCCCAGTTTGAGAAGTAT 59.752 40.000 0.00 0.00 0.00 2.12
5592 6245 4.023878 TGGTTCCGTGTGCAAAATTACTAC 60.024 41.667 0.00 0.00 0.00 2.73
5594 6247 3.391965 TCCGTGTGCAAAATTACTACGT 58.608 40.909 0.00 0.00 0.00 3.57
5595 6248 4.554292 TCCGTGTGCAAAATTACTACGTA 58.446 39.130 0.00 0.00 0.00 3.57
5596 6249 5.170021 TCCGTGTGCAAAATTACTACGTAT 58.830 37.500 0.00 0.00 0.00 3.06
5597 6250 5.062433 TCCGTGTGCAAAATTACTACGTATG 59.938 40.000 0.00 0.00 0.00 2.39
5598 6251 5.252583 CGTGTGCAAAATTACTACGTATGG 58.747 41.667 0.00 0.00 0.00 2.74
5644 6297 0.516001 GTGACAGTACGTCTCGCTGA 59.484 55.000 15.47 0.00 45.60 4.26
5682 6335 8.834465 AGACGAAGATACAATTACGTATACTGT 58.166 33.333 0.00 3.14 32.18 3.55
5705 6358 3.135901 AATCCAGTCTTTTCTGGGTGCG 61.136 50.000 11.96 0.00 46.89 5.34
5709 6362 1.072331 AGTCTTTTCTGGGTGCGTCAT 59.928 47.619 0.00 0.00 0.00 3.06
5744 6397 4.263506 ACTTTCTGAATACAGGGTGAAGGG 60.264 45.833 0.00 0.00 43.60 3.95
5818 6471 7.456725 AGATGATATCTTGTTACCTTCCCATG 58.543 38.462 3.98 0.00 35.76 3.66
6047 6700 5.458015 CCGAATAAGGTCTTCAAACCAAAC 58.542 41.667 0.00 0.00 42.12 2.93
6125 6953 2.560105 GGGGTCGTTAGTCTGTACAAGT 59.440 50.000 0.00 0.00 0.00 3.16
6152 6981 9.454585 CATGTGATGTGATATGGTGTAATTTTC 57.545 33.333 0.00 0.00 0.00 2.29
6166 6995 7.232534 TGGTGTAATTTTCTTTAGCATTCTGGT 59.767 33.333 0.00 0.00 0.00 4.00
6175 7004 7.849804 TCTTTAGCATTCTGGTATCAAGTTC 57.150 36.000 0.00 0.00 29.73 3.01
6187 7016 5.047306 TGGTATCAAGTTCACTGGTGTAGAG 60.047 44.000 0.53 0.00 0.00 2.43
6281 7110 3.754965 CTGTTCTTTGAGACCCCAATCA 58.245 45.455 0.00 0.00 0.00 2.57
6296 7211 7.236225 AGACCCCAATCATTTTTCTTTCTGATT 59.764 33.333 0.00 0.00 38.52 2.57
6350 7265 6.853872 TGTTGTTAATCAGTCAATTTACGCAC 59.146 34.615 0.00 0.00 0.00 5.34
6354 7269 2.333926 TCAGTCAATTTACGCACTCCG 58.666 47.619 0.00 0.00 44.21 4.63
6369 7284 2.884639 CACTCCGTTTCACTTTGGGAAT 59.115 45.455 0.00 0.00 0.00 3.01
6424 7799 5.917541 TGTACTAAAGCAGCAACAAGTAC 57.082 39.130 15.30 15.30 39.66 2.73
6523 7899 6.312918 GGAAATAAGTTCGTCAGCAATCAGTA 59.687 38.462 0.00 0.00 37.08 2.74
6666 8047 7.701539 TCATATGTACAAAAATGCTCCAGTT 57.298 32.000 0.00 0.00 0.00 3.16
6699 8080 6.653020 TGTCAACATATCAATGAAGGTAGCT 58.347 36.000 0.00 0.00 36.54 3.32
6763 8144 4.193893 CCGGCAGGCATGGATGGA 62.194 66.667 0.00 0.00 0.00 3.41
6764 8145 2.124193 CGGCAGGCATGGATGGAA 60.124 61.111 0.00 0.00 0.00 3.53
6765 8146 2.484062 CGGCAGGCATGGATGGAAC 61.484 63.158 0.00 0.00 0.00 3.62
6766 8147 1.076485 GGCAGGCATGGATGGAACT 60.076 57.895 0.00 0.00 0.00 3.01
6767 8148 1.389609 GGCAGGCATGGATGGAACTG 61.390 60.000 0.00 0.00 0.00 3.16
6768 8149 0.394762 GCAGGCATGGATGGAACTGA 60.395 55.000 0.00 0.00 0.00 3.41
6769 8150 1.753141 GCAGGCATGGATGGAACTGAT 60.753 52.381 0.00 0.00 0.00 2.90
6770 8151 2.662866 CAGGCATGGATGGAACTGATT 58.337 47.619 0.00 0.00 0.00 2.57
6771 8152 2.621998 CAGGCATGGATGGAACTGATTC 59.378 50.000 0.00 0.00 0.00 2.52
6772 8153 2.512896 AGGCATGGATGGAACTGATTCT 59.487 45.455 0.00 0.00 34.98 2.40
6773 8154 2.621998 GGCATGGATGGAACTGATTCTG 59.378 50.000 0.00 0.00 34.98 3.02
6774 8155 2.034305 GCATGGATGGAACTGATTCTGC 59.966 50.000 0.00 0.00 34.98 4.26
6775 8156 3.552875 CATGGATGGAACTGATTCTGCT 58.447 45.455 0.00 0.00 34.98 4.24
6776 8157 3.726557 TGGATGGAACTGATTCTGCTT 57.273 42.857 0.00 0.00 34.98 3.91
6777 8158 4.842531 TGGATGGAACTGATTCTGCTTA 57.157 40.909 0.00 0.00 34.98 3.09
6778 8159 4.774124 TGGATGGAACTGATTCTGCTTAG 58.226 43.478 0.00 0.00 34.98 2.18
6779 8160 4.133078 GGATGGAACTGATTCTGCTTAGG 58.867 47.826 0.00 0.00 34.98 2.69
6780 8161 2.991250 TGGAACTGATTCTGCTTAGGC 58.009 47.619 0.00 0.00 34.98 3.93
6781 8162 2.293170 GGAACTGATTCTGCTTAGGCC 58.707 52.381 0.00 0.00 37.74 5.19
6782 8163 2.293170 GAACTGATTCTGCTTAGGCCC 58.707 52.381 0.00 0.00 37.74 5.80
6783 8164 0.179000 ACTGATTCTGCTTAGGCCCG 59.821 55.000 0.00 0.00 37.74 6.13
6784 8165 0.533755 CTGATTCTGCTTAGGCCCGG 60.534 60.000 0.00 0.00 37.74 5.73
6785 8166 1.894282 GATTCTGCTTAGGCCCGGC 60.894 63.158 0.00 0.00 37.74 6.13
6786 8167 2.608970 GATTCTGCTTAGGCCCGGCA 62.609 60.000 12.58 13.08 37.74 5.69
6788 8169 4.864334 CTGCTTAGGCCCGGCAGG 62.864 72.222 25.33 12.78 46.51 4.85
6841 8222 3.382546 CCAAATCCCTAATGCCTGAACAG 59.617 47.826 0.00 0.00 0.00 3.16
6856 8237 4.404073 CCTGAACAGAGCCTGTAGTCTATT 59.596 45.833 8.07 0.00 44.62 1.73
6892 8273 8.635765 AGAATCCTATTTGTAGTTTCTGCAAA 57.364 30.769 13.33 13.33 46.36 3.68
7020 8401 6.149308 TCAAGCTGTACAATGATCGAACAAAT 59.851 34.615 0.00 0.00 0.00 2.32
7106 8487 6.923508 TCGCGATCATTATACTTGACTTTGAT 59.076 34.615 3.71 0.00 0.00 2.57
7148 8532 5.221303 CCGGATATCCATTCAACTGCAATTT 60.221 40.000 21.70 0.00 35.14 1.82
7235 8619 5.239306 TCAGGTTCTGCAGAATAAACACAAG 59.761 40.000 30.65 13.77 36.33 3.16
7237 8621 4.022849 GGTTCTGCAGAATAAACACAAGCT 60.023 41.667 30.65 0.00 36.33 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 0.687354 ATGAGTCGTGGCTCCTGTTT 59.313 50.000 0.00 0.00 34.74 2.83
134 139 3.039526 CCCTCCCTCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
135 140 4.890306 GCCCTCCCTCTCCCTCCC 62.890 77.778 0.00 0.00 0.00 4.30
136 141 3.767044 GAGCCCTCCCTCTCCCTCC 62.767 73.684 0.00 0.00 0.00 4.30
137 142 2.123033 GAGCCCTCCCTCTCCCTC 60.123 72.222 0.00 0.00 0.00 4.30
193 207 3.649277 CTACCTCTTGTGCGCCGCT 62.649 63.158 11.67 0.00 0.00 5.52
289 318 3.323903 CGCGCACGTGTACACACA 61.324 61.111 24.98 0.00 46.75 3.72
341 387 0.461870 CATTGATTCCTCACGGGCGA 60.462 55.000 0.00 0.00 34.39 5.54
472 518 0.513820 GTCGGGCGAATCGTTTTTGA 59.486 50.000 4.07 0.00 0.00 2.69
538 591 2.436646 CCTGGCCGAAATCAGCGT 60.437 61.111 0.00 0.00 0.00 5.07
609 667 1.677633 CCCCAGGCGATTTTTCCGT 60.678 57.895 0.00 0.00 0.00 4.69
612 670 2.493547 CCTCCCCAGGCGATTTTTC 58.506 57.895 0.00 0.00 30.98 2.29
690 748 3.120580 TCGCAAATACTCGCATATGCATG 60.121 43.478 26.52 19.38 42.21 4.06
694 752 5.022335 ACAATCGCAAATACTCGCATATG 57.978 39.130 0.00 0.00 0.00 1.78
695 753 5.926542 AGTACAATCGCAAATACTCGCATAT 59.073 36.000 0.00 0.00 0.00 1.78
700 758 5.742453 AGTACAGTACAATCGCAAATACTCG 59.258 40.000 13.37 0.00 0.00 4.18
760 818 7.189512 CCGTGATAAGGACATGAGAAATTTTC 58.810 38.462 0.00 0.66 0.00 2.29
763 821 5.104527 TCCCGTGATAAGGACATGAGAAATT 60.105 40.000 0.00 0.00 0.00 1.82
764 822 4.408921 TCCCGTGATAAGGACATGAGAAAT 59.591 41.667 0.00 0.00 0.00 2.17
772 830 1.829222 GGAGTTCCCGTGATAAGGACA 59.171 52.381 0.00 0.00 0.00 4.02
792 851 7.361286 GGTTGTATCTCTAGCTTTTGGAGTTTG 60.361 40.741 0.00 0.00 35.95 2.93
813 875 2.590575 CTTCCCACGCACGGTTGT 60.591 61.111 0.00 0.00 0.00 3.32
984 1052 4.043200 GCGCTGGTGAACTTGGGC 62.043 66.667 0.00 0.00 0.00 5.36
1235 1322 2.754375 CGTACCTTTGGTGGGGCT 59.246 61.111 0.00 0.00 36.19 5.19
1312 1519 1.278127 CCAACCACCGGACAGTTAGAT 59.722 52.381 9.46 0.00 0.00 1.98
1316 1523 0.750182 CAACCAACCACCGGACAGTT 60.750 55.000 9.46 5.47 0.00 3.16
1318 1525 1.896660 CCAACCAACCACCGGACAG 60.897 63.158 9.46 0.00 0.00 3.51
1455 1662 0.633921 CAGAGAGGAAGGGAGGGAGA 59.366 60.000 0.00 0.00 0.00 3.71
1503 1718 1.363744 GCCTCAATTCTCACACGAGG 58.636 55.000 0.00 0.00 45.05 4.63
1511 1726 2.420372 GGTCGAAAAGGCCTCAATTCTC 59.580 50.000 5.23 7.41 42.70 2.87
1671 1886 3.565307 ACTGGCAGGAAATGAAGTGAAA 58.435 40.909 20.34 0.00 0.00 2.69
1673 1888 2.957402 ACTGGCAGGAAATGAAGTGA 57.043 45.000 20.34 0.00 0.00 3.41
1681 1896 1.241315 GCGGCTAAACTGGCAGGAAA 61.241 55.000 20.34 2.01 0.00 3.13
1784 1999 3.100503 GCTGTAGAGCCCTCCAGCC 62.101 68.421 0.97 0.00 43.45 4.85
1867 2082 8.755018 CAAACAACTAATTCAGTTCCACATTTC 58.245 33.333 0.00 0.00 44.48 2.17
1899 2114 0.597637 CACCCTAACAGATAGCGGCG 60.598 60.000 0.51 0.51 0.00 6.46
1908 2123 4.223032 ACACACTAGAATCCACCCTAACAG 59.777 45.833 0.00 0.00 0.00 3.16
1949 2164 4.552767 CGGCGCTAAACTCAATTATTCAGG 60.553 45.833 7.64 0.00 0.00 3.86
1950 2165 4.518217 CGGCGCTAAACTCAATTATTCAG 58.482 43.478 7.64 0.00 0.00 3.02
1954 2169 2.287915 CAGCGGCGCTAAACTCAATTAT 59.712 45.455 35.90 4.54 36.40 1.28
2027 2242 9.645128 TCAATGTAGGATTCCAAATGTCATAAT 57.355 29.630 5.29 0.00 0.00 1.28
2056 2271 7.605410 TCTATAACCGATTTCTGTGTTTTCC 57.395 36.000 0.00 0.00 0.00 3.13
2177 2762 4.406003 GGATTCCTAGCAAGAGGTTAGACA 59.594 45.833 0.00 0.00 37.88 3.41
2210 2798 9.059023 GGATTGGTTTTCTACTAGGGGATATAT 57.941 37.037 0.00 0.00 0.00 0.86
2309 2907 9.354673 TCAGAGAATTTACAAAGGAATTCTGTT 57.645 29.630 14.06 0.00 46.85 3.16
2313 2911 9.442047 TCTCTCAGAGAATTTACAAAGGAATTC 57.558 33.333 0.32 0.00 40.73 2.17
2348 2946 6.367969 ACAGCAAAGTAGATACCAGTAAAACG 59.632 38.462 0.00 0.00 0.00 3.60
2525 3130 7.978975 ACAAAGCAAACACTGTTAATACACAAT 59.021 29.630 0.00 0.00 0.00 2.71
2526 3131 7.316640 ACAAAGCAAACACTGTTAATACACAA 58.683 30.769 0.00 0.00 0.00 3.33
2527 3132 6.857956 ACAAAGCAAACACTGTTAATACACA 58.142 32.000 0.00 0.00 0.00 3.72
2528 3133 7.749539 AACAAAGCAAACACTGTTAATACAC 57.250 32.000 0.00 0.00 30.41 2.90
2593 3203 2.747855 GGGCCTCTGCAACGAAGG 60.748 66.667 0.84 0.00 40.13 3.46
2598 3208 2.562738 ACTTTTTATGGGCCTCTGCAAC 59.437 45.455 4.53 0.00 40.13 4.17
2655 3265 8.824756 TGGAAGTTACTAGTATGACATTCTCT 57.175 34.615 2.79 0.00 0.00 3.10
2683 3293 0.613260 TGAACTCTGGTTGCCGCTAT 59.387 50.000 0.00 0.00 35.58 2.97
2879 3490 6.690530 TCCAAATGGAAAATAGAACAGCAAG 58.309 36.000 0.00 0.00 42.18 4.01
2946 3557 4.989168 ACTCACTAAGAACGATTGGTTGTC 59.011 41.667 0.00 0.00 39.50 3.18
3027 3638 8.118976 TCTTGGGTGTAAATATATAGACTCCG 57.881 38.462 9.96 0.00 0.00 4.63
3213 3846 1.305213 ACGGGAGCATGGCCAAAAT 60.305 52.632 10.96 0.00 0.00 1.82
3236 3869 5.683743 GCGACACTAGCAAAAACAAAACATA 59.316 36.000 0.00 0.00 34.19 2.29
3255 3888 2.224426 ACTAATGGTTTGAGTGGCGACA 60.224 45.455 0.45 0.00 38.70 4.35
3256 3889 2.415512 GACTAATGGTTTGAGTGGCGAC 59.584 50.000 0.00 0.00 0.00 5.19
3257 3890 2.037902 TGACTAATGGTTTGAGTGGCGA 59.962 45.455 0.00 0.00 0.00 5.54
3258 3891 2.422597 TGACTAATGGTTTGAGTGGCG 58.577 47.619 0.00 0.00 0.00 5.69
3259 3892 4.518970 TCTTTGACTAATGGTTTGAGTGGC 59.481 41.667 0.00 0.00 0.00 5.01
3260 3893 5.182001 CCTCTTTGACTAATGGTTTGAGTGG 59.818 44.000 0.00 0.00 0.00 4.00
3261 3894 5.765182 ACCTCTTTGACTAATGGTTTGAGTG 59.235 40.000 0.00 0.00 0.00 3.51
3262 3895 5.941788 ACCTCTTTGACTAATGGTTTGAGT 58.058 37.500 0.00 0.00 0.00 3.41
3263 3896 6.072452 GGAACCTCTTTGACTAATGGTTTGAG 60.072 42.308 0.00 0.00 34.61 3.02
3264 3897 5.768164 GGAACCTCTTTGACTAATGGTTTGA 59.232 40.000 0.00 0.00 34.61 2.69
3265 3898 5.534654 TGGAACCTCTTTGACTAATGGTTTG 59.465 40.000 0.00 0.00 34.61 2.93
3266 3899 5.701224 TGGAACCTCTTTGACTAATGGTTT 58.299 37.500 0.00 0.00 34.61 3.27
3267 3900 5.163088 ACTGGAACCTCTTTGACTAATGGTT 60.163 40.000 0.00 0.00 36.09 3.67
3268 3901 4.351111 ACTGGAACCTCTTTGACTAATGGT 59.649 41.667 0.00 0.00 0.00 3.55
3269 3902 4.911390 ACTGGAACCTCTTTGACTAATGG 58.089 43.478 0.00 0.00 0.00 3.16
3270 3903 5.997746 TCAACTGGAACCTCTTTGACTAATG 59.002 40.000 0.00 0.00 0.00 1.90
3271 3904 6.187727 TCAACTGGAACCTCTTTGACTAAT 57.812 37.500 0.00 0.00 0.00 1.73
3272 3905 5.623956 TCAACTGGAACCTCTTTGACTAA 57.376 39.130 0.00 0.00 0.00 2.24
3273 3906 5.623956 TTCAACTGGAACCTCTTTGACTA 57.376 39.130 0.00 0.00 0.00 2.59
3274 3907 4.503714 TTCAACTGGAACCTCTTTGACT 57.496 40.909 0.00 0.00 0.00 3.41
3285 3918 6.522625 TGTCAGAATTTTGTTCAACTGGAA 57.477 33.333 0.00 0.00 0.00 3.53
3286 3919 5.450412 GCTGTCAGAATTTTGTTCAACTGGA 60.450 40.000 3.32 0.00 0.00 3.86
3287 3920 4.741676 GCTGTCAGAATTTTGTTCAACTGG 59.258 41.667 3.32 0.00 0.00 4.00
3288 3921 5.585390 AGCTGTCAGAATTTTGTTCAACTG 58.415 37.500 3.32 0.00 0.00 3.16
3289 3922 5.841957 AGCTGTCAGAATTTTGTTCAACT 57.158 34.783 3.32 0.00 0.00 3.16
3290 3923 5.232838 CCAAGCTGTCAGAATTTTGTTCAAC 59.767 40.000 3.32 0.00 0.00 3.18
3291 3924 5.105392 ACCAAGCTGTCAGAATTTTGTTCAA 60.105 36.000 3.32 0.00 0.00 2.69
3292 3925 4.402155 ACCAAGCTGTCAGAATTTTGTTCA 59.598 37.500 3.32 0.00 0.00 3.18
3293 3926 4.741676 CACCAAGCTGTCAGAATTTTGTTC 59.258 41.667 3.32 0.00 0.00 3.18
3294 3927 4.402155 TCACCAAGCTGTCAGAATTTTGTT 59.598 37.500 3.32 0.00 0.00 2.83
3295 3928 3.953612 TCACCAAGCTGTCAGAATTTTGT 59.046 39.130 3.32 0.00 0.00 2.83
3296 3929 4.202040 TGTCACCAAGCTGTCAGAATTTTG 60.202 41.667 3.32 2.41 0.00 2.44
3297 3930 3.953612 TGTCACCAAGCTGTCAGAATTTT 59.046 39.130 3.32 0.00 0.00 1.82
3298 3931 3.554934 TGTCACCAAGCTGTCAGAATTT 58.445 40.909 3.32 0.00 0.00 1.82
3299 3932 3.213206 TGTCACCAAGCTGTCAGAATT 57.787 42.857 3.32 0.00 0.00 2.17
3300 3933 2.936919 TGTCACCAAGCTGTCAGAAT 57.063 45.000 3.32 0.00 0.00 2.40
3301 3934 2.936919 ATGTCACCAAGCTGTCAGAA 57.063 45.000 3.32 0.00 0.00 3.02
3302 3935 2.632512 TGTATGTCACCAAGCTGTCAGA 59.367 45.455 3.32 0.00 0.00 3.27
3303 3936 3.044235 TGTATGTCACCAAGCTGTCAG 57.956 47.619 0.00 0.00 0.00 3.51
3304 3937 3.483808 TTGTATGTCACCAAGCTGTCA 57.516 42.857 0.00 0.00 0.00 3.58
3305 3938 5.376854 AATTTGTATGTCACCAAGCTGTC 57.623 39.130 0.00 0.00 0.00 3.51
3306 3939 5.301551 TCAAATTTGTATGTCACCAAGCTGT 59.698 36.000 17.47 0.00 0.00 4.40
3307 3940 5.771469 TCAAATTTGTATGTCACCAAGCTG 58.229 37.500 17.47 0.00 0.00 4.24
3308 3941 5.769662 TCTCAAATTTGTATGTCACCAAGCT 59.230 36.000 17.47 0.00 0.00 3.74
3309 3942 6.012658 TCTCAAATTTGTATGTCACCAAGC 57.987 37.500 17.47 0.00 0.00 4.01
3310 3943 7.173907 ACTCTCTCAAATTTGTATGTCACCAAG 59.826 37.037 17.47 4.26 0.00 3.61
3311 3944 6.998074 ACTCTCTCAAATTTGTATGTCACCAA 59.002 34.615 17.47 0.00 0.00 3.67
3312 3945 6.533730 ACTCTCTCAAATTTGTATGTCACCA 58.466 36.000 17.47 0.00 0.00 4.17
3313 3946 8.723942 ATACTCTCTCAAATTTGTATGTCACC 57.276 34.615 17.47 0.00 0.00 4.02
3327 3960 9.491675 CCGACTAGAACTAATATACTCTCTCAA 57.508 37.037 0.00 0.00 0.00 3.02
3328 3961 7.603404 GCCGACTAGAACTAATATACTCTCTCA 59.397 40.741 0.00 0.00 0.00 3.27
3329 3962 7.603404 TGCCGACTAGAACTAATATACTCTCTC 59.397 40.741 0.00 0.00 0.00 3.20
3330 3963 7.451732 TGCCGACTAGAACTAATATACTCTCT 58.548 38.462 0.00 0.00 0.00 3.10
3331 3964 7.670009 TGCCGACTAGAACTAATATACTCTC 57.330 40.000 0.00 0.00 0.00 3.20
3332 3965 7.666388 ACATGCCGACTAGAACTAATATACTCT 59.334 37.037 0.00 0.00 0.00 3.24
3333 3966 7.818642 ACATGCCGACTAGAACTAATATACTC 58.181 38.462 0.00 0.00 0.00 2.59
3334 3967 7.762588 ACATGCCGACTAGAACTAATATACT 57.237 36.000 0.00 0.00 0.00 2.12
3335 3968 8.813643 AAACATGCCGACTAGAACTAATATAC 57.186 34.615 0.00 0.00 0.00 1.47
3336 3969 9.256477 CAAAACATGCCGACTAGAACTAATATA 57.744 33.333 0.00 0.00 0.00 0.86
3337 3970 7.769044 ACAAAACATGCCGACTAGAACTAATAT 59.231 33.333 0.00 0.00 0.00 1.28
3338 3971 7.101054 ACAAAACATGCCGACTAGAACTAATA 58.899 34.615 0.00 0.00 0.00 0.98
3339 3972 5.938125 ACAAAACATGCCGACTAGAACTAAT 59.062 36.000 0.00 0.00 0.00 1.73
3340 3973 5.302360 ACAAAACATGCCGACTAGAACTAA 58.698 37.500 0.00 0.00 0.00 2.24
3341 3974 4.890088 ACAAAACATGCCGACTAGAACTA 58.110 39.130 0.00 0.00 0.00 2.24
3342 3975 3.740115 ACAAAACATGCCGACTAGAACT 58.260 40.909 0.00 0.00 0.00 3.01
3343 3976 4.483476 AACAAAACATGCCGACTAGAAC 57.517 40.909 0.00 0.00 0.00 3.01
3344 3977 5.508200 AAAACAAAACATGCCGACTAGAA 57.492 34.783 0.00 0.00 0.00 2.10
3345 3978 5.277825 CAAAAACAAAACATGCCGACTAGA 58.722 37.500 0.00 0.00 0.00 2.43
3346 3979 4.085107 GCAAAAACAAAACATGCCGACTAG 60.085 41.667 0.00 0.00 0.00 2.57
3347 3980 3.799420 GCAAAAACAAAACATGCCGACTA 59.201 39.130 0.00 0.00 0.00 2.59
3348 3981 2.607180 GCAAAAACAAAACATGCCGACT 59.393 40.909 0.00 0.00 0.00 4.18
3349 3982 2.607180 AGCAAAAACAAAACATGCCGAC 59.393 40.909 0.00 0.00 37.73 4.79
3350 3983 2.898705 AGCAAAAACAAAACATGCCGA 58.101 38.095 0.00 0.00 37.73 5.54
3351 3984 3.362888 GCTAGCAAAAACAAAACATGCCG 60.363 43.478 10.63 0.00 37.73 5.69
3352 3985 3.362888 CGCTAGCAAAAACAAAACATGCC 60.363 43.478 16.45 0.00 37.73 4.40
3353 3986 3.245048 ACGCTAGCAAAAACAAAACATGC 59.755 39.130 16.45 0.00 37.28 4.06
3354 3987 4.373914 CGACGCTAGCAAAAACAAAACATG 60.374 41.667 16.45 0.00 0.00 3.21
3355 3988 3.728718 CGACGCTAGCAAAAACAAAACAT 59.271 39.130 16.45 0.00 0.00 2.71
3356 3989 3.102276 CGACGCTAGCAAAAACAAAACA 58.898 40.909 16.45 0.00 0.00 2.83
3357 3990 2.098068 GCGACGCTAGCAAAAACAAAAC 60.098 45.455 16.45 0.00 34.19 2.43
3358 3991 2.113289 GCGACGCTAGCAAAAACAAAA 58.887 42.857 16.45 0.00 34.19 2.44
3359 3992 1.598430 GGCGACGCTAGCAAAAACAAA 60.598 47.619 20.77 0.00 36.08 2.83
3360 3993 0.040781 GGCGACGCTAGCAAAAACAA 60.041 50.000 20.77 0.00 36.08 2.83
3361 3994 1.160946 TGGCGACGCTAGCAAAAACA 61.161 50.000 20.77 4.92 36.08 2.83
3362 3995 0.168128 ATGGCGACGCTAGCAAAAAC 59.832 50.000 20.77 2.10 36.08 2.43
3363 3996 0.878416 AATGGCGACGCTAGCAAAAA 59.122 45.000 20.77 0.00 36.08 1.94
3364 3997 0.446222 GAATGGCGACGCTAGCAAAA 59.554 50.000 20.77 0.00 36.08 2.44
3365 3998 0.672091 TGAATGGCGACGCTAGCAAA 60.672 50.000 20.77 0.00 36.08 3.68
3366 3999 0.672091 TTGAATGGCGACGCTAGCAA 60.672 50.000 20.77 18.19 36.08 3.91
3374 4007 3.438781 TGACTAATGGTTTGAATGGCGAC 59.561 43.478 0.00 0.00 0.00 5.19
3435 4068 7.446931 TCTCTTAAATTTGTATGTCACCAAGCA 59.553 33.333 0.00 0.00 0.00 3.91
3456 4089 9.850198 AACCGACTAGAACTAATATACTCTCTT 57.150 33.333 0.00 0.00 0.00 2.85
3512 4145 8.849543 TGTAAATAGGAAGTACCAATAGGAGT 57.150 34.615 0.00 0.00 42.04 3.85
3698 4332 6.418819 GCACCGATGATTTCCATGATTAAAAG 59.581 38.462 0.00 0.00 35.17 2.27
3744 4378 6.320164 TGGTGATGCATTAATTTGGTAGTACC 59.680 38.462 12.80 12.80 39.22 3.34
3780 4414 2.941453 TAGACATCTCGCAGTTCACC 57.059 50.000 0.00 0.00 0.00 4.02
3841 4475 9.744468 GATCAGTGGTAAAATTAGTTGTTTTGT 57.256 29.630 0.00 0.00 31.71 2.83
3842 4476 9.965824 AGATCAGTGGTAAAATTAGTTGTTTTG 57.034 29.630 0.00 0.00 31.71 2.44
3976 4612 3.605749 TACCACTGCGCCAAGGCTC 62.606 63.158 4.18 1.20 39.32 4.70
3977 4613 2.690653 TTTACCACTGCGCCAAGGCT 62.691 55.000 4.18 0.00 39.32 4.58
3978 4614 2.200170 CTTTACCACTGCGCCAAGGC 62.200 60.000 4.18 0.00 37.85 4.35
3979 4615 1.875963 CTTTACCACTGCGCCAAGG 59.124 57.895 4.18 6.21 0.00 3.61
3980 4616 1.210155 GCTTTACCACTGCGCCAAG 59.790 57.895 4.18 0.00 0.00 3.61
3981 4617 1.228124 AGCTTTACCACTGCGCCAA 60.228 52.632 4.18 0.00 0.00 4.52
3982 4618 1.965930 CAGCTTTACCACTGCGCCA 60.966 57.895 4.18 0.00 0.00 5.69
3983 4619 2.870372 CAGCTTTACCACTGCGCC 59.130 61.111 4.18 0.00 0.00 6.53
3987 4623 0.607489 AGGCAGCAGCTTTACCACTG 60.607 55.000 0.00 0.00 41.70 3.66
3988 4624 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.00 38.40 4.00
3989 4625 0.242017 CAAGGCAGCAGCTTTACCAC 59.758 55.000 0.00 0.00 38.07 4.16
3990 4626 0.178992 ACAAGGCAGCAGCTTTACCA 60.179 50.000 0.00 0.00 38.07 3.25
3991 4627 0.242017 CACAAGGCAGCAGCTTTACC 59.758 55.000 0.00 0.00 38.07 2.85
3992 4628 1.068954 GTCACAAGGCAGCAGCTTTAC 60.069 52.381 0.00 0.00 38.07 2.01
3993 4629 1.238439 GTCACAAGGCAGCAGCTTTA 58.762 50.000 0.00 0.00 38.07 1.85
3994 4630 1.458639 GGTCACAAGGCAGCAGCTTT 61.459 55.000 0.00 0.00 41.17 3.51
3995 4631 1.900498 GGTCACAAGGCAGCAGCTT 60.900 57.895 0.00 0.00 41.70 3.74
3996 4632 2.282040 GGTCACAAGGCAGCAGCT 60.282 61.111 0.00 0.00 41.70 4.24
3997 4633 1.975407 ATGGTCACAAGGCAGCAGC 60.975 57.895 0.00 0.00 41.10 5.25
3998 4634 0.607217 TCATGGTCACAAGGCAGCAG 60.607 55.000 0.00 0.00 0.00 4.24
3999 4635 0.607217 CTCATGGTCACAAGGCAGCA 60.607 55.000 0.00 0.00 0.00 4.41
4000 4636 1.310933 CCTCATGGTCACAAGGCAGC 61.311 60.000 0.00 0.00 0.00 5.25
4001 4637 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
4002 4638 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
4014 4650 2.025887 GGACTTGAACCCATGACCTCAT 60.026 50.000 0.00 0.00 36.96 2.90
4015 4651 1.351017 GGACTTGAACCCATGACCTCA 59.649 52.381 0.00 0.00 32.45 3.86
4016 4652 1.630878 AGGACTTGAACCCATGACCTC 59.369 52.381 0.00 0.00 37.82 3.85
4017 4653 1.352352 CAGGACTTGAACCCATGACCT 59.648 52.381 0.00 0.00 40.96 3.85
4018 4654 1.614317 CCAGGACTTGAACCCATGACC 60.614 57.143 0.00 0.00 34.29 4.02
4019 4655 1.351017 TCCAGGACTTGAACCCATGAC 59.649 52.381 0.00 0.00 0.00 3.06
4020 4656 1.741028 TCCAGGACTTGAACCCATGA 58.259 50.000 0.00 0.00 0.00 3.07
4021 4657 2.558359 GTTTCCAGGACTTGAACCCATG 59.442 50.000 0.00 0.00 0.00 3.66
4022 4658 2.176798 TGTTTCCAGGACTTGAACCCAT 59.823 45.455 0.00 0.00 0.00 4.00
4023 4659 1.566703 TGTTTCCAGGACTTGAACCCA 59.433 47.619 0.00 0.00 0.00 4.51
4024 4660 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
4025 4661 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
4026 4662 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
4027 4663 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
4028 4664 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
4029 4665 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
4030 4666 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
4031 4667 1.439543 AAGAGGCTGTTTCCAGGACT 58.560 50.000 0.00 0.00 39.22 3.85
4032 4668 2.038557 TGTAAGAGGCTGTTTCCAGGAC 59.961 50.000 0.90 0.00 39.22 3.85
4033 4669 2.303022 CTGTAAGAGGCTGTTTCCAGGA 59.697 50.000 0.90 0.00 35.89 3.86
4034 4670 2.303022 TCTGTAAGAGGCTGTTTCCAGG 59.697 50.000 17.71 5.83 38.67 4.45
4035 4671 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
4047 4683 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
4048 4684 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
4049 4685 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
4050 4686 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
4051 4687 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
4052 4688 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
4053 4689 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
4054 4690 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
4055 4691 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
4056 4692 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
4057 4693 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
4058 4694 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
4059 4695 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
4060 4696 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
4061 4697 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
4062 4698 3.679824 ATATAGTACGCAGCCTTTCCC 57.320 47.619 0.00 0.00 0.00 3.97
4063 4699 4.492611 GGTATATAGTACGCAGCCTTTCC 58.507 47.826 0.00 0.00 0.00 3.13
4064 4700 4.021719 TGGGTATATAGTACGCAGCCTTTC 60.022 45.833 1.46 0.00 35.83 2.62
4065 4701 3.899360 TGGGTATATAGTACGCAGCCTTT 59.101 43.478 1.46 0.00 35.83 3.11
4066 4702 3.503365 TGGGTATATAGTACGCAGCCTT 58.497 45.455 1.46 0.00 35.83 4.35
4067 4703 3.165087 TGGGTATATAGTACGCAGCCT 57.835 47.619 1.46 0.00 35.83 4.58
4068 4704 3.947910 TTGGGTATATAGTACGCAGCC 57.052 47.619 5.35 0.00 40.58 4.85
4069 4705 4.684703 CACTTTGGGTATATAGTACGCAGC 59.315 45.833 5.35 0.00 40.58 5.25
4070 4706 5.221382 ACCACTTTGGGTATATAGTACGCAG 60.221 44.000 5.35 0.00 43.37 5.18
4071 4707 4.650588 ACCACTTTGGGTATATAGTACGCA 59.349 41.667 0.00 1.46 43.37 5.24
4072 4708 5.205759 ACCACTTTGGGTATATAGTACGC 57.794 43.478 0.00 0.00 43.37 4.42
4073 4709 5.455392 CGACCACTTTGGGTATATAGTACG 58.545 45.833 0.00 0.00 43.37 3.67
4074 4710 5.536161 TCCGACCACTTTGGGTATATAGTAC 59.464 44.000 0.00 0.00 43.37 2.73
4075 4711 5.536161 GTCCGACCACTTTGGGTATATAGTA 59.464 44.000 0.00 0.00 43.37 1.82
4076 4712 4.343239 GTCCGACCACTTTGGGTATATAGT 59.657 45.833 0.00 0.00 43.37 2.12
4077 4713 4.262335 GGTCCGACCACTTTGGGTATATAG 60.262 50.000 13.05 0.00 43.37 1.31
4078 4714 3.642848 GGTCCGACCACTTTGGGTATATA 59.357 47.826 13.05 0.00 43.37 0.86
4079 4715 2.436911 GGTCCGACCACTTTGGGTATAT 59.563 50.000 13.05 0.00 43.37 0.86
4080 4716 1.832998 GGTCCGACCACTTTGGGTATA 59.167 52.381 13.05 0.00 43.37 1.47
4081 4717 0.616891 GGTCCGACCACTTTGGGTAT 59.383 55.000 13.05 0.00 43.37 2.73
4082 4718 1.482748 GGGTCCGACCACTTTGGGTA 61.483 60.000 19.43 0.00 43.37 3.69
4083 4719 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
4084 4720 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
4085 4721 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
4086 4722 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
4087 4723 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
4088 4724 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
4089 4725 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
4090 4726 2.606826 AGGGAAGGGTCCGACCAC 60.607 66.667 19.43 8.70 46.04 4.16
4091 4727 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
4092 4728 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
4093 4729 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
4094 4730 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
4095 4731 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
4096 4732 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
4097 4733 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
4098 4734 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
4099 4735 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
4100 4736 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
4101 4737 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
4113 4749 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
4116 4752 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
4117 4753 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
4118 4754 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
4119 4755 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
4125 4761 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
4126 4762 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
4127 4763 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
4128 4764 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
4129 4765 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
4147 4783 6.192970 ACTTATCAGTATCATGAAAGGGGG 57.807 41.667 0.00 0.00 31.76 5.40
4148 4784 9.877178 GTATACTTATCAGTATCATGAAAGGGG 57.123 37.037 0.00 0.00 41.73 4.79
4172 4808 4.772624 AGCAAGACAAGGACATCAGTAGTA 59.227 41.667 0.00 0.00 0.00 1.82
4180 4816 3.177228 AGGTAGAGCAAGACAAGGACAT 58.823 45.455 0.00 0.00 0.00 3.06
4182 4818 2.093921 GGAGGTAGAGCAAGACAAGGAC 60.094 54.545 0.00 0.00 0.00 3.85
4196 4832 1.824852 GGGGCAAAACATTGGAGGTAG 59.175 52.381 0.00 0.00 0.00 3.18
4269 4905 7.491048 GGCAAACATCGGTTTTATTGTAATGAT 59.509 33.333 0.00 0.00 44.63 2.45
4274 4910 5.707242 TGGCAAACATCGGTTTTATTGTA 57.293 34.783 0.00 0.00 44.63 2.41
4285 4921 3.899734 TCAGAAAACATGGCAAACATCG 58.100 40.909 0.00 0.00 37.84 3.84
4417 5053 4.681074 TTGATACGATGGCCATGTAAGA 57.319 40.909 26.56 12.78 0.00 2.10
4470 5106 4.214971 CAGCAAGGACAATATGATGGCTAC 59.785 45.833 0.00 0.00 0.00 3.58
4482 5122 3.207265 TCTACAAAGCAGCAAGGACAA 57.793 42.857 0.00 0.00 0.00 3.18
4535 5175 6.153000 CCGTATTGCTAGATACAGGACCTTAT 59.847 42.308 0.00 0.00 33.12 1.73
4568 5208 6.591750 TCTTGGAAGAACTAACGAGAAGAT 57.408 37.500 0.00 0.00 30.73 2.40
4606 5246 6.239714 GGATCACCTTAATGGAAGCTCTATCA 60.240 42.308 0.00 0.00 39.71 2.15
4815 5455 6.473397 ACAACTTCAAGATTAGAAAGAGCG 57.527 37.500 0.00 0.00 0.00 5.03
5051 5691 4.584327 TCAGACACCATGGTATATCACG 57.416 45.455 19.28 5.76 0.00 4.35
5129 5781 0.452987 CATTGGGACCAATCTGCGTG 59.547 55.000 13.45 0.00 43.92 5.34
5560 6213 2.033550 GCACACGGAACCACAAAATGTA 59.966 45.455 0.00 0.00 0.00 2.29
5644 6297 6.513180 TGTATCTTCGTCTCAAAGACAGTTT 58.487 36.000 7.78 0.00 45.30 2.66
5744 6397 1.270252 CCAAGTTTGGCATTGTGGTCC 60.270 52.381 0.00 0.00 42.21 4.46
6125 6953 8.750515 AAATTACACCATATCACATCACATGA 57.249 30.769 0.00 0.00 0.00 3.07
6152 6981 7.335422 AGTGAACTTGATACCAGAATGCTAAAG 59.665 37.037 0.00 0.00 31.97 1.85
6166 6995 7.039011 ACAATCTCTACACCAGTGAACTTGATA 60.039 37.037 4.48 0.00 30.87 2.15
6175 7004 5.989168 TGTTTGTACAATCTCTACACCAGTG 59.011 40.000 9.56 0.00 0.00 3.66
6350 7265 5.240844 ACTTAATTCCCAAAGTGAAACGGAG 59.759 40.000 0.00 0.00 45.86 4.63
6354 7269 7.762159 TGACAAACTTAATTCCCAAAGTGAAAC 59.238 33.333 0.00 0.00 36.12 2.78
6424 7799 6.935240 TTATGTACTCCCTCCAATCCATAG 57.065 41.667 0.00 0.00 0.00 2.23
6523 7899 5.367937 AGAATATATTGCCTCTGACCAGTGT 59.632 40.000 1.78 0.00 0.00 3.55
6571 7952 4.157105 GGGCAAATCCTAACGTGTTACAAT 59.843 41.667 0.00 0.00 34.39 2.71
6666 8047 8.624367 TCATTGATATGTTGACATGATATGCA 57.376 30.769 0.00 0.00 37.15 3.96
6699 8080 0.516877 GTTGCGTTGATAGCAGTGCA 59.483 50.000 19.20 5.26 46.01 4.57
6761 8142 2.293170 GGCCTAAGCAGAATCAGTTCC 58.707 52.381 0.00 0.00 42.56 3.62
6762 8143 2.293170 GGGCCTAAGCAGAATCAGTTC 58.707 52.381 0.84 0.00 42.56 3.01
6763 8144 1.407437 CGGGCCTAAGCAGAATCAGTT 60.407 52.381 0.84 0.00 42.56 3.16
6764 8145 0.179000 CGGGCCTAAGCAGAATCAGT 59.821 55.000 0.84 0.00 42.56 3.41
6765 8146 0.533755 CCGGGCCTAAGCAGAATCAG 60.534 60.000 0.84 0.00 42.56 2.90
6766 8147 1.526887 CCGGGCCTAAGCAGAATCA 59.473 57.895 0.84 0.00 42.56 2.57
6767 8148 1.894282 GCCGGGCCTAAGCAGAATC 60.894 63.158 8.12 0.00 42.56 2.52
6768 8149 2.193248 GCCGGGCCTAAGCAGAAT 59.807 61.111 8.12 0.00 42.56 2.40
6769 8150 3.326578 TGCCGGGCCTAAGCAGAA 61.327 61.111 17.97 0.00 42.56 3.02
6789 8170 1.153107 TCGGCTTCCTGCATCCATG 60.153 57.895 0.00 0.00 45.15 3.66
6790 8171 1.153086 GTCGGCTTCCTGCATCCAT 60.153 57.895 0.00 0.00 45.15 3.41
6791 8172 2.268920 GTCGGCTTCCTGCATCCA 59.731 61.111 0.00 0.00 45.15 3.41
6792 8173 1.817099 CTGTCGGCTTCCTGCATCC 60.817 63.158 0.00 0.00 45.15 3.51
6793 8174 0.179062 ATCTGTCGGCTTCCTGCATC 60.179 55.000 0.00 0.00 45.15 3.91
6794 8175 0.463295 CATCTGTCGGCTTCCTGCAT 60.463 55.000 0.00 0.00 45.15 3.96
6795 8176 1.078918 CATCTGTCGGCTTCCTGCA 60.079 57.895 0.00 0.00 45.15 4.41
6841 8222 9.649167 TTTTGTTAGTAAATAGACTACAGGCTC 57.351 33.333 0.00 0.00 31.58 4.70
6871 8252 5.183140 GGCTTTGCAGAAACTACAAATAGGA 59.817 40.000 0.00 0.00 33.19 2.94
6956 8337 4.352298 GGATCCACCTGAAAATATCCCTCT 59.648 45.833 6.95 0.00 35.41 3.69
7071 8452 7.695820 AGTATAATGATCGCGAGGTAAGATAC 58.304 38.462 16.66 16.27 0.00 2.24
7106 8487 1.302511 GGCCTGAAAGAAGACGCCA 60.303 57.895 0.00 0.00 36.38 5.69
7148 8532 5.737860 AGTCTTGCATCTTGATGATACACA 58.262 37.500 14.09 0.16 33.36 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.