Multiple sequence alignment - TraesCS4B01G251700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G251700 chr4B 100.000 2521 0 0 400 2920 517759598 517757078 0.000000e+00 4656
1 TraesCS4B01G251700 chr4B 100.000 126 0 0 1 126 517759997 517759872 1.750000e-57 233
2 TraesCS4B01G251700 chr4B 93.333 120 8 0 1369 1488 79997266 79997147 8.320000e-41 178
3 TraesCS4B01G251700 chr4D 90.443 994 27 19 400 1370 420503304 420504252 0.000000e+00 1247
4 TraesCS4B01G251700 chr4D 95.249 442 19 2 1518 1958 420504359 420504799 0.000000e+00 699
5 TraesCS4B01G251700 chr4D 90.338 414 36 2 2507 2920 420505299 420505708 9.210000e-150 540
6 TraesCS4B01G251700 chr4A 89.879 662 27 22 720 1371 43697074 43697705 0.000000e+00 815
7 TraesCS4B01G251700 chr4A 86.872 617 64 11 1480 2093 43697709 43698311 0.000000e+00 675
8 TraesCS4B01G251700 chr4A 88.136 413 20 10 2509 2920 43698317 43698701 5.700000e-127 464
9 TraesCS4B01G251700 chr5D 84.518 394 45 13 2100 2486 381406891 381406507 2.750000e-100 375
10 TraesCS4B01G251700 chr6B 83.619 409 53 11 2099 2497 439434074 439434478 3.550000e-99 372
11 TraesCS4B01G251700 chr7A 83.586 396 52 10 2099 2486 18972087 18972477 2.770000e-95 359
12 TraesCS4B01G251700 chr1B 81.500 400 62 9 2096 2486 629794709 629794313 4.700000e-83 318
13 TraesCS4B01G251700 chr1B 94.915 118 5 1 1370 1487 624663025 624662909 1.790000e-42 183
14 TraesCS4B01G251700 chr7D 81.795 390 50 13 2110 2486 630719522 630719141 1.020000e-79 307
15 TraesCS4B01G251700 chr7B 81.378 392 59 13 2103 2486 608378713 608378328 1.020000e-79 307
16 TraesCS4B01G251700 chr7B 81.061 396 64 8 2099 2486 204671526 204671918 3.660000e-79 305
17 TraesCS4B01G251700 chr7B 96.396 111 4 0 1367 1477 261055917 261056027 1.790000e-42 183
18 TraesCS4B01G251700 chr7B 96.396 111 4 0 1369 1479 521568102 521567992 1.790000e-42 183
19 TraesCS4B01G251700 chr1D 81.794 379 55 11 2098 2468 471835807 471835435 3.660000e-79 305
20 TraesCS4B01G251700 chr1D 95.763 118 4 1 1370 1487 5428006 5428122 3.840000e-44 189
21 TraesCS4B01G251700 chr3A 81.566 396 48 20 2099 2483 644629922 644630303 1.310000e-78 303
22 TraesCS4B01G251700 chr6A 94.167 120 6 1 1370 1489 475435162 475435044 6.430000e-42 182
23 TraesCS4B01G251700 chr6A 93.388 121 8 0 1363 1483 259311245 259311125 2.310000e-41 180
24 TraesCS4B01G251700 chr6A 90.840 131 9 3 1369 1498 12457478 12457606 3.870000e-39 172
25 TraesCS4B01G251700 chr2B 92.063 126 7 3 1352 1476 29537140 29537263 1.080000e-39 174


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G251700 chr4B 517757078 517759997 2919 True 2444.500000 4656 100.000000 1 2920 2 chr4B.!!$R2 2919
1 TraesCS4B01G251700 chr4D 420503304 420505708 2404 False 828.666667 1247 92.010000 400 2920 3 chr4D.!!$F1 2520
2 TraesCS4B01G251700 chr4A 43697074 43698701 1627 False 651.333333 815 88.295667 720 2920 3 chr4A.!!$F1 2200

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.033991 CTCTCCTCTTCGTCCCTCCA 60.034 60.0 0.0 0.0 0.0 3.86 F
937 946 0.034767 CCATCCATCCATCCATCCCG 60.035 60.0 0.0 0.0 0.0 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1691 1720 0.038159 ACAAGAGGAGAAGAACGGCG 60.038 55.0 4.8 4.8 0.0 6.46 R
2337 2727 0.173255 CGATGAAATGGGGGTTGTGC 59.827 55.0 0.0 0.0 0.0 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.366469 ATGTTGTCACCCGAGCTCT 58.634 52.632 12.85 0.00 0.00 4.09
19 20 0.247736 ATGTTGTCACCCGAGCTCTC 59.752 55.000 12.85 0.00 0.00 3.20
20 21 1.079750 GTTGTCACCCGAGCTCTCC 60.080 63.158 12.85 0.00 0.00 3.71
21 22 1.228894 TTGTCACCCGAGCTCTCCT 60.229 57.895 12.85 0.00 0.00 3.69
22 23 1.251527 TTGTCACCCGAGCTCTCCTC 61.252 60.000 12.85 0.00 37.22 3.71
23 24 1.379309 GTCACCCGAGCTCTCCTCT 60.379 63.158 12.85 0.00 38.49 3.69
24 25 0.968393 GTCACCCGAGCTCTCCTCTT 60.968 60.000 12.85 0.00 38.49 2.85
25 26 0.681564 TCACCCGAGCTCTCCTCTTC 60.682 60.000 12.85 0.00 38.49 2.87
26 27 1.751162 ACCCGAGCTCTCCTCTTCG 60.751 63.158 12.85 0.00 38.49 3.79
27 28 1.751162 CCCGAGCTCTCCTCTTCGT 60.751 63.158 12.85 0.00 38.49 3.85
28 29 1.720694 CCCGAGCTCTCCTCTTCGTC 61.721 65.000 12.85 0.00 38.49 4.20
29 30 1.720694 CCGAGCTCTCCTCTTCGTCC 61.721 65.000 12.85 0.00 38.49 4.79
30 31 1.720694 CGAGCTCTCCTCTTCGTCCC 61.721 65.000 12.85 0.00 38.49 4.46
31 32 0.395173 GAGCTCTCCTCTTCGTCCCT 60.395 60.000 6.43 0.00 37.60 4.20
32 33 0.395173 AGCTCTCCTCTTCGTCCCTC 60.395 60.000 0.00 0.00 0.00 4.30
33 34 1.388837 GCTCTCCTCTTCGTCCCTCC 61.389 65.000 0.00 0.00 0.00 4.30
34 35 0.033991 CTCTCCTCTTCGTCCCTCCA 60.034 60.000 0.00 0.00 0.00 3.86
35 36 0.033991 TCTCCTCTTCGTCCCTCCAG 60.034 60.000 0.00 0.00 0.00 3.86
36 37 1.000486 TCCTCTTCGTCCCTCCAGG 60.000 63.158 0.00 0.00 0.00 4.45
37 38 1.000486 CCTCTTCGTCCCTCCAGGA 60.000 63.158 0.00 0.00 44.91 3.86
44 45 4.608148 TCCCTCCAGGAAGCCATT 57.392 55.556 0.00 0.00 43.78 3.16
45 46 2.311287 TCCCTCCAGGAAGCCATTC 58.689 57.895 0.00 0.00 43.78 2.67
46 47 0.253347 TCCCTCCAGGAAGCCATTCT 60.253 55.000 0.00 0.00 43.78 2.40
47 48 0.182299 CCCTCCAGGAAGCCATTCTC 59.818 60.000 0.00 0.00 38.24 2.87
48 49 0.914644 CCTCCAGGAAGCCATTCTCA 59.085 55.000 0.00 0.00 37.39 3.27
49 50 1.283029 CCTCCAGGAAGCCATTCTCAA 59.717 52.381 0.00 0.00 37.39 3.02
50 51 2.363683 CTCCAGGAAGCCATTCTCAAC 58.636 52.381 0.00 0.00 35.63 3.18
51 52 1.089920 CCAGGAAGCCATTCTCAACG 58.910 55.000 0.00 0.00 35.63 4.10
52 53 0.449388 CAGGAAGCCATTCTCAACGC 59.551 55.000 0.00 0.00 35.63 4.84
53 54 0.678048 AGGAAGCCATTCTCAACGCC 60.678 55.000 0.00 0.00 35.63 5.68
54 55 1.425428 GAAGCCATTCTCAACGCCG 59.575 57.895 0.00 0.00 32.33 6.46
55 56 1.003839 AAGCCATTCTCAACGCCGA 60.004 52.632 0.00 0.00 0.00 5.54
56 57 1.298859 AAGCCATTCTCAACGCCGAC 61.299 55.000 0.00 0.00 0.00 4.79
58 59 1.445410 CCATTCTCAACGCCGACGA 60.445 57.895 0.00 0.00 43.93 4.20
59 60 1.413767 CCATTCTCAACGCCGACGAG 61.414 60.000 0.00 0.00 43.93 4.18
60 61 0.732880 CATTCTCAACGCCGACGAGT 60.733 55.000 0.00 0.00 43.93 4.18
61 62 0.806868 ATTCTCAACGCCGACGAGTA 59.193 50.000 0.00 0.00 43.93 2.59
62 63 0.592637 TTCTCAACGCCGACGAGTAA 59.407 50.000 0.00 0.00 43.93 2.24
63 64 0.167470 TCTCAACGCCGACGAGTAAG 59.833 55.000 0.00 0.00 43.93 2.34
64 65 0.167470 CTCAACGCCGACGAGTAAGA 59.833 55.000 0.00 0.00 43.93 2.10
65 66 0.592637 TCAACGCCGACGAGTAAGAA 59.407 50.000 0.00 0.00 43.93 2.52
66 67 1.200716 TCAACGCCGACGAGTAAGAAT 59.799 47.619 0.00 0.00 43.93 2.40
67 68 1.320555 CAACGCCGACGAGTAAGAATG 59.679 52.381 0.00 0.00 43.93 2.67
68 69 0.806868 ACGCCGACGAGTAAGAATGA 59.193 50.000 0.00 0.00 43.93 2.57
69 70 1.404391 ACGCCGACGAGTAAGAATGAT 59.596 47.619 0.00 0.00 43.93 2.45
70 71 1.781429 CGCCGACGAGTAAGAATGATG 59.219 52.381 0.00 0.00 43.93 3.07
71 72 2.128035 GCCGACGAGTAAGAATGATGG 58.872 52.381 0.00 0.00 0.00 3.51
72 73 2.128035 CCGACGAGTAAGAATGATGGC 58.872 52.381 0.00 0.00 0.00 4.40
73 74 1.781429 CGACGAGTAAGAATGATGGCG 59.219 52.381 0.00 0.00 0.00 5.69
74 75 2.128035 GACGAGTAAGAATGATGGCGG 58.872 52.381 0.00 0.00 0.00 6.13
75 76 0.861837 CGAGTAAGAATGATGGCGGC 59.138 55.000 0.00 0.00 0.00 6.53
76 77 0.861837 GAGTAAGAATGATGGCGGCG 59.138 55.000 0.51 0.51 0.00 6.46
77 78 0.532862 AGTAAGAATGATGGCGGCGG 60.533 55.000 9.78 0.00 0.00 6.13
78 79 1.891919 TAAGAATGATGGCGGCGGC 60.892 57.895 27.76 27.76 38.90 6.53
79 80 2.601194 TAAGAATGATGGCGGCGGCA 62.601 55.000 37.75 37.75 43.52 5.69
80 81 3.957535 GAATGATGGCGGCGGCAG 61.958 66.667 37.95 0.00 42.43 4.85
98 99 3.350612 CGGCGGCAAGGTCGAAAA 61.351 61.111 10.53 0.00 37.14 2.29
99 100 2.899044 CGGCGGCAAGGTCGAAAAA 61.899 57.895 10.53 0.00 37.14 1.94
100 101 1.081442 GGCGGCAAGGTCGAAAAAG 60.081 57.895 3.07 0.00 29.41 2.27
101 102 1.081442 GCGGCAAGGTCGAAAAAGG 60.081 57.895 0.00 0.00 29.41 3.11
102 103 1.512156 GCGGCAAGGTCGAAAAAGGA 61.512 55.000 0.00 0.00 29.41 3.36
103 104 0.517316 CGGCAAGGTCGAAAAAGGAG 59.483 55.000 0.00 0.00 29.41 3.69
104 105 1.876416 CGGCAAGGTCGAAAAAGGAGA 60.876 52.381 0.00 0.00 29.41 3.71
105 106 1.807142 GGCAAGGTCGAAAAAGGAGAG 59.193 52.381 0.00 0.00 0.00 3.20
106 107 2.550208 GGCAAGGTCGAAAAAGGAGAGA 60.550 50.000 0.00 0.00 0.00 3.10
107 108 2.739379 GCAAGGTCGAAAAAGGAGAGAG 59.261 50.000 0.00 0.00 0.00 3.20
108 109 3.555168 GCAAGGTCGAAAAAGGAGAGAGA 60.555 47.826 0.00 0.00 0.00 3.10
109 110 4.241681 CAAGGTCGAAAAAGGAGAGAGAG 58.758 47.826 0.00 0.00 0.00 3.20
110 111 3.768878 AGGTCGAAAAAGGAGAGAGAGA 58.231 45.455 0.00 0.00 0.00 3.10
111 112 3.761752 AGGTCGAAAAAGGAGAGAGAGAG 59.238 47.826 0.00 0.00 0.00 3.20
112 113 3.759618 GGTCGAAAAAGGAGAGAGAGAGA 59.240 47.826 0.00 0.00 0.00 3.10
113 114 4.142469 GGTCGAAAAAGGAGAGAGAGAGAG 60.142 50.000 0.00 0.00 0.00 3.20
114 115 4.698304 GTCGAAAAAGGAGAGAGAGAGAGA 59.302 45.833 0.00 0.00 0.00 3.10
115 116 4.941263 TCGAAAAAGGAGAGAGAGAGAGAG 59.059 45.833 0.00 0.00 0.00 3.20
116 117 4.941263 CGAAAAAGGAGAGAGAGAGAGAGA 59.059 45.833 0.00 0.00 0.00 3.10
117 118 5.065218 CGAAAAAGGAGAGAGAGAGAGAGAG 59.935 48.000 0.00 0.00 0.00 3.20
118 119 5.779241 AAAAGGAGAGAGAGAGAGAGAGA 57.221 43.478 0.00 0.00 0.00 3.10
119 120 5.365021 AAAGGAGAGAGAGAGAGAGAGAG 57.635 47.826 0.00 0.00 0.00 3.20
120 121 4.271807 AGGAGAGAGAGAGAGAGAGAGA 57.728 50.000 0.00 0.00 0.00 3.10
121 122 4.222336 AGGAGAGAGAGAGAGAGAGAGAG 58.778 52.174 0.00 0.00 0.00 3.20
122 123 4.078922 AGGAGAGAGAGAGAGAGAGAGAGA 60.079 50.000 0.00 0.00 0.00 3.10
123 124 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
124 125 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
125 126 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
432 433 3.071206 GCGAGTGGGGAGAGAGCA 61.071 66.667 0.00 0.00 0.00 4.26
461 462 1.367471 GCCTTTTTGACCAGCACCC 59.633 57.895 0.00 0.00 0.00 4.61
466 467 1.098712 TTTTGACCAGCACCCGACAC 61.099 55.000 0.00 0.00 0.00 3.67
510 511 1.448985 GCCGTTAGGTCAATGCTGAA 58.551 50.000 0.00 0.00 40.50 3.02
522 523 5.126061 GGTCAATGCTGAAACATCACCTAAT 59.874 40.000 0.00 0.00 31.88 1.73
566 567 3.621268 TCAGGCTTAAAACATCCGAATCG 59.379 43.478 0.00 0.00 0.00 3.34
567 568 3.621268 CAGGCTTAAAACATCCGAATCGA 59.379 43.478 3.36 0.00 0.00 3.59
568 569 4.273480 CAGGCTTAAAACATCCGAATCGAT 59.727 41.667 3.36 0.00 0.00 3.59
575 576 5.880054 AAACATCCGAATCGATCACTTTT 57.120 34.783 3.36 0.00 0.00 2.27
588 589 5.010719 TCGATCACTTTTCTGACTTGGTAGT 59.989 40.000 0.00 0.00 37.31 2.73
662 663 5.585047 GTGGTAGTTTTCAGCTATAGGGTTG 59.415 44.000 1.04 0.00 0.00 3.77
764 772 2.158449 GCTGCAAGACTCACATACACAC 59.842 50.000 0.00 0.00 34.07 3.82
799 807 1.047002 AGGGCAATCTCCGAGATCAG 58.953 55.000 11.40 8.55 32.89 2.90
887 896 1.444553 CGCAACCTCCTCACTCGAC 60.445 63.158 0.00 0.00 0.00 4.20
888 897 1.079750 GCAACCTCCTCACTCGACC 60.080 63.158 0.00 0.00 0.00 4.79
889 898 1.816863 GCAACCTCCTCACTCGACCA 61.817 60.000 0.00 0.00 0.00 4.02
890 899 0.244994 CAACCTCCTCACTCGACCAG 59.755 60.000 0.00 0.00 0.00 4.00
895 904 0.894184 TCCTCACTCGACCAGGTCAC 60.894 60.000 20.13 0.00 32.09 3.67
902 911 0.400594 TCGACCAGGTCACTCAGAGA 59.599 55.000 20.13 3.76 32.09 3.10
931 940 1.340795 GGCTCATCCATCCATCCATCC 60.341 57.143 0.00 0.00 34.01 3.51
932 941 1.353358 GCTCATCCATCCATCCATCCA 59.647 52.381 0.00 0.00 0.00 3.41
933 942 2.025226 GCTCATCCATCCATCCATCCAT 60.025 50.000 0.00 0.00 0.00 3.41
934 943 3.887352 CTCATCCATCCATCCATCCATC 58.113 50.000 0.00 0.00 0.00 3.51
935 944 2.579400 TCATCCATCCATCCATCCATCC 59.421 50.000 0.00 0.00 0.00 3.51
936 945 1.375610 TCCATCCATCCATCCATCCC 58.624 55.000 0.00 0.00 0.00 3.85
937 946 0.034767 CCATCCATCCATCCATCCCG 60.035 60.000 0.00 0.00 0.00 5.14
938 947 0.694771 CATCCATCCATCCATCCCGT 59.305 55.000 0.00 0.00 0.00 5.28
993 1006 1.798813 GAAACCACTGAACACTAGCGG 59.201 52.381 0.00 0.00 0.00 5.52
1181 1208 6.371548 GGTAGAGTGCAAATTCTTCACACATA 59.628 38.462 0.00 0.00 33.69 2.29
1182 1209 6.492007 AGAGTGCAAATTCTTCACACATAG 57.508 37.500 0.00 0.00 33.69 2.23
1184 1211 6.148480 AGAGTGCAAATTCTTCACACATAGAC 59.852 38.462 0.00 0.00 33.69 2.59
1185 1212 5.764686 AGTGCAAATTCTTCACACATAGACA 59.235 36.000 0.00 0.00 33.69 3.41
1186 1213 6.432162 AGTGCAAATTCTTCACACATAGACAT 59.568 34.615 0.00 0.00 33.69 3.06
1357 1386 3.541242 TCCTGGACAAATGGAATGGTT 57.459 42.857 0.00 0.00 0.00 3.67
1359 1388 2.234414 CCTGGACAAATGGAATGGTTGG 59.766 50.000 0.00 0.00 0.00 3.77
1365 1394 1.176527 AATGGAATGGTTGGTCAGCG 58.823 50.000 0.00 0.00 0.00 5.18
1373 1402 0.458716 GGTTGGTCAGCGAGCTACTC 60.459 60.000 16.35 7.87 36.42 2.59
1374 1403 0.528470 GTTGGTCAGCGAGCTACTCT 59.472 55.000 0.00 0.00 34.23 3.24
1378 1407 0.661020 GTCAGCGAGCTACTCTCTCC 59.339 60.000 0.00 0.00 39.70 3.71
1379 1408 0.812014 TCAGCGAGCTACTCTCTCCG 60.812 60.000 0.00 0.00 39.70 4.63
1380 1409 1.092921 CAGCGAGCTACTCTCTCCGT 61.093 60.000 0.00 0.00 39.70 4.69
1381 1410 0.393267 AGCGAGCTACTCTCTCCGTT 60.393 55.000 0.00 0.00 39.70 4.44
1383 1412 0.658897 CGAGCTACTCTCTCCGTTCC 59.341 60.000 0.00 0.00 39.70 3.62
1385 1414 2.093106 GAGCTACTCTCTCCGTTCCAA 58.907 52.381 0.00 0.00 38.78 3.53
1386 1415 2.492484 GAGCTACTCTCTCCGTTCCAAA 59.508 50.000 0.00 0.00 38.78 3.28
1388 1417 3.515901 AGCTACTCTCTCCGTTCCAAATT 59.484 43.478 0.00 0.00 0.00 1.82
1390 1419 4.804665 GCTACTCTCTCCGTTCCAAATTAC 59.195 45.833 0.00 0.00 0.00 1.89
1391 1420 5.394333 GCTACTCTCTCCGTTCCAAATTACT 60.394 44.000 0.00 0.00 0.00 2.24
1392 1421 5.074584 ACTCTCTCCGTTCCAAATTACTC 57.925 43.478 0.00 0.00 0.00 2.59
1393 1422 4.106029 TCTCTCCGTTCCAAATTACTCG 57.894 45.455 0.00 0.00 0.00 4.18
1394 1423 3.508793 TCTCTCCGTTCCAAATTACTCGT 59.491 43.478 0.00 0.00 0.00 4.18
1395 1424 3.841643 TCTCCGTTCCAAATTACTCGTC 58.158 45.455 0.00 0.00 0.00 4.20
1396 1425 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
1397 1426 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
1398 1427 1.990563 CGTTCCAAATTACTCGTCGCT 59.009 47.619 0.00 0.00 0.00 4.93
1399 1428 2.222508 CGTTCCAAATTACTCGTCGCTG 60.223 50.000 0.00 0.00 0.00 5.18
1400 1429 2.991190 GTTCCAAATTACTCGTCGCTGA 59.009 45.455 0.00 0.00 0.00 4.26
1401 1430 3.306917 TCCAAATTACTCGTCGCTGAA 57.693 42.857 0.00 0.00 0.00 3.02
1402 1431 3.655486 TCCAAATTACTCGTCGCTGAAA 58.345 40.909 0.00 0.00 0.00 2.69
1403 1432 4.250464 TCCAAATTACTCGTCGCTGAAAT 58.750 39.130 0.00 0.00 0.00 2.17
1404 1433 4.092821 TCCAAATTACTCGTCGCTGAAATG 59.907 41.667 0.00 0.00 0.00 2.32
1405 1434 4.334443 CAAATTACTCGTCGCTGAAATGG 58.666 43.478 0.00 0.00 0.00 3.16
1406 1435 3.520290 ATTACTCGTCGCTGAAATGGA 57.480 42.857 0.00 0.00 0.00 3.41
1407 1436 3.520290 TTACTCGTCGCTGAAATGGAT 57.480 42.857 0.00 0.00 0.00 3.41
1408 1437 1.645034 ACTCGTCGCTGAAATGGATG 58.355 50.000 0.00 0.00 0.00 3.51
1409 1438 1.066858 ACTCGTCGCTGAAATGGATGT 60.067 47.619 0.00 0.00 0.00 3.06
1410 1439 2.165641 ACTCGTCGCTGAAATGGATGTA 59.834 45.455 0.00 0.00 0.00 2.29
1411 1440 3.181475 ACTCGTCGCTGAAATGGATGTAT 60.181 43.478 0.00 0.00 0.00 2.29
1412 1441 3.381045 TCGTCGCTGAAATGGATGTATC 58.619 45.455 0.00 0.00 0.00 2.24
1413 1442 3.068165 TCGTCGCTGAAATGGATGTATCT 59.932 43.478 0.00 0.00 0.00 1.98
1414 1443 4.277423 TCGTCGCTGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 0.00 1.98
1415 1444 4.618912 CGTCGCTGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 0.00 2.43
1416 1445 5.562890 CGTCGCTGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 0.00 2.43
1417 1446 6.216569 GTCGCTGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 0.00 2.10
1418 1447 6.870965 GTCGCTGAAATGGATGTATCTAGAAT 59.129 38.462 0.00 0.00 0.00 2.40
1419 1448 7.386299 GTCGCTGAAATGGATGTATCTAGAATT 59.614 37.037 0.00 0.00 0.00 2.17
1420 1449 7.933577 TCGCTGAAATGGATGTATCTAGAATTT 59.066 33.333 0.00 0.00 0.00 1.82
1421 1450 9.208022 CGCTGAAATGGATGTATCTAGAATTTA 57.792 33.333 0.00 0.00 0.00 1.40
1448 1477 5.955488 ACATCTAGATACATCCATACGTGC 58.045 41.667 4.54 0.00 0.00 5.34
1461 1490 3.301579 CCATACGTGCGACAAGTAATTCG 60.302 47.826 0.00 0.00 32.82 3.34
1504 1533 7.390162 TGCTCTACACTATCTCATCTCATACAG 59.610 40.741 0.00 0.00 0.00 2.74
1506 1535 9.936759 CTCTACACTATCTCATCTCATACAGTA 57.063 37.037 0.00 0.00 0.00 2.74
1507 1536 9.936759 TCTACACTATCTCATCTCATACAGTAG 57.063 37.037 0.00 0.00 0.00 2.57
1508 1537 9.719355 CTACACTATCTCATCTCATACAGTAGT 57.281 37.037 0.00 0.00 0.00 2.73
1633 1662 0.101040 CTCAAGGAGCTGCTCGAGAG 59.899 60.000 17.64 21.87 0.00 3.20
1671 1700 3.382546 AGAAAAGTATGTGATGCCATGGC 59.617 43.478 30.54 30.54 42.35 4.40
1673 1702 0.552363 AGTATGTGATGCCATGGCCA 59.448 50.000 33.44 23.55 41.09 5.36
1691 1720 2.357323 GCCAGATTTTGAAGCTCTAGCC 59.643 50.000 0.00 0.00 43.38 3.93
1771 1800 2.599659 CTCTCTTGGGCGAAAATTTGC 58.400 47.619 0.00 0.00 36.84 3.68
1779 1808 2.793268 GCGAAAATTTGCCATTGCTC 57.207 45.000 0.00 0.00 38.71 4.26
1900 1929 1.066858 GGACTTCATCACGGAGCTCAA 60.067 52.381 17.19 0.00 0.00 3.02
1904 1933 2.662006 TCATCACGGAGCTCAAGAAG 57.338 50.000 17.19 7.08 0.00 2.85
1979 2008 3.559024 CAGAGTTCTGGCACTGCG 58.441 61.111 1.09 0.00 40.20 5.18
2010 2039 2.821366 CCACAGCGGCAGGATGTC 60.821 66.667 1.45 0.00 42.83 3.06
2052 2084 9.874205 CTAGAGAAAGAGAGATTTGATTTGAGT 57.126 33.333 0.00 0.00 0.00 3.41
2056 2088 5.768980 AGAGAGATTTGATTTGAGTGGGA 57.231 39.130 0.00 0.00 0.00 4.37
2057 2089 6.131972 AGAGAGATTTGATTTGAGTGGGAA 57.868 37.500 0.00 0.00 0.00 3.97
2067 2457 4.916983 TTTGAGTGGGAAATGAACAGTG 57.083 40.909 0.00 0.00 0.00 3.66
2074 2464 2.547855 GGGAAATGAACAGTGGGCAAAC 60.548 50.000 0.00 0.00 0.00 2.93
2093 2483 6.294176 GGCAAACACACAATCTAGTTCAGAAT 60.294 38.462 0.00 0.00 36.67 2.40
2094 2484 7.141363 GCAAACACACAATCTAGTTCAGAATT 58.859 34.615 0.00 0.00 36.67 2.17
2097 2487 5.764686 ACACACAATCTAGTTCAGAATTGCA 59.235 36.000 0.00 0.00 36.67 4.08
2098 2488 6.072838 ACACACAATCTAGTTCAGAATTGCAG 60.073 38.462 0.00 0.00 36.67 4.41
2099 2489 6.148315 CACACAATCTAGTTCAGAATTGCAGA 59.852 38.462 0.00 0.00 36.67 4.26
2100 2490 6.370994 ACACAATCTAGTTCAGAATTGCAGAG 59.629 38.462 0.00 0.00 36.67 3.35
2101 2491 6.592994 CACAATCTAGTTCAGAATTGCAGAGA 59.407 38.462 0.00 0.00 36.67 3.10
2102 2492 7.118825 CACAATCTAGTTCAGAATTGCAGAGAA 59.881 37.037 0.00 0.00 36.67 2.87
2103 2493 7.828223 ACAATCTAGTTCAGAATTGCAGAGAAT 59.172 33.333 0.00 0.00 36.67 2.40
2104 2494 7.789273 ATCTAGTTCAGAATTGCAGAGAATG 57.211 36.000 0.00 0.00 36.67 2.67
2105 2495 6.111382 TCTAGTTCAGAATTGCAGAGAATGG 58.889 40.000 0.00 0.00 0.00 3.16
2106 2496 3.442977 AGTTCAGAATTGCAGAGAATGGC 59.557 43.478 0.00 0.00 0.00 4.40
2107 2497 2.011947 TCAGAATTGCAGAGAATGGCG 58.988 47.619 0.00 0.00 0.00 5.69
2108 2498 1.741706 CAGAATTGCAGAGAATGGCGT 59.258 47.619 0.00 0.00 0.00 5.68
2109 2499 2.163010 CAGAATTGCAGAGAATGGCGTT 59.837 45.455 0.00 0.00 0.00 4.84
2110 2500 2.821969 AGAATTGCAGAGAATGGCGTTT 59.178 40.909 0.00 0.00 0.00 3.60
2111 2501 3.256631 AGAATTGCAGAGAATGGCGTTTT 59.743 39.130 0.00 0.00 0.00 2.43
2112 2502 2.420628 TTGCAGAGAATGGCGTTTTG 57.579 45.000 0.00 0.00 0.00 2.44
2113 2503 0.597568 TGCAGAGAATGGCGTTTTGG 59.402 50.000 0.00 0.00 0.00 3.28
2114 2504 0.733909 GCAGAGAATGGCGTTTTGGC 60.734 55.000 0.00 0.00 45.12 4.52
2115 2505 0.883833 CAGAGAATGGCGTTTTGGCT 59.116 50.000 0.00 0.00 45.14 4.75
2116 2506 1.135575 CAGAGAATGGCGTTTTGGCTC 60.136 52.381 0.00 0.00 45.14 4.70
2117 2507 1.168714 GAGAATGGCGTTTTGGCTCT 58.831 50.000 0.00 0.00 45.14 4.09
2118 2508 1.131315 GAGAATGGCGTTTTGGCTCTC 59.869 52.381 0.00 0.00 45.14 3.20
2119 2509 0.179189 GAATGGCGTTTTGGCTCTCG 60.179 55.000 0.00 0.00 45.14 4.04
2120 2510 1.586154 AATGGCGTTTTGGCTCTCGG 61.586 55.000 0.00 0.00 45.14 4.63
2121 2511 4.103103 GGCGTTTTGGCTCTCGGC 62.103 66.667 0.00 0.00 40.72 5.54
2130 2520 2.903357 GCTCTCGGCCTTGATGGA 59.097 61.111 0.00 0.00 38.35 3.41
2131 2521 1.227497 GCTCTCGGCCTTGATGGAG 60.227 63.158 0.00 0.00 38.35 3.86
2132 2522 1.445095 CTCTCGGCCTTGATGGAGG 59.555 63.158 0.00 0.00 39.93 4.30
2139 2529 3.502164 CCTTGATGGAGGCCGATTT 57.498 52.632 0.00 0.00 38.35 2.17
2140 2530 1.767759 CCTTGATGGAGGCCGATTTT 58.232 50.000 0.00 0.00 38.35 1.82
2141 2531 2.102578 CCTTGATGGAGGCCGATTTTT 58.897 47.619 0.00 0.00 38.35 1.94
2208 2598 9.877178 ATGACAAAAATTGTACCAAGTAAACAA 57.123 25.926 0.00 0.00 45.52 2.83
2209 2599 9.141400 TGACAAAAATTGTACCAAGTAAACAAC 57.859 29.630 0.00 0.00 45.52 3.32
2210 2600 9.141400 GACAAAAATTGTACCAAGTAAACAACA 57.859 29.630 0.00 0.00 45.52 3.33
2211 2601 9.490379 ACAAAAATTGTACCAAGTAAACAACAA 57.510 25.926 0.00 0.00 43.27 2.83
2214 2604 9.660180 AAAATTGTACCAAGTAAACAACAATGT 57.340 25.926 0.00 0.00 43.14 2.71
2215 2605 8.641499 AATTGTACCAAGTAAACAACAATGTG 57.359 30.769 0.00 0.00 40.46 3.21
2216 2606 7.392494 TTGTACCAAGTAAACAACAATGTGA 57.608 32.000 0.00 0.00 40.46 3.58
2217 2607 7.392494 TGTACCAAGTAAACAACAATGTGAA 57.608 32.000 0.00 0.00 40.46 3.18
2218 2608 7.476667 TGTACCAAGTAAACAACAATGTGAAG 58.523 34.615 0.00 0.00 40.46 3.02
2219 2609 5.348164 ACCAAGTAAACAACAATGTGAAGC 58.652 37.500 0.00 0.00 40.46 3.86
2220 2610 5.105554 ACCAAGTAAACAACAATGTGAAGCA 60.106 36.000 0.00 0.00 40.46 3.91
2221 2611 5.984926 CCAAGTAAACAACAATGTGAAGCAT 59.015 36.000 0.00 0.00 40.46 3.79
2222 2612 7.144661 CCAAGTAAACAACAATGTGAAGCATA 58.855 34.615 0.00 0.00 40.46 3.14
2223 2613 7.814107 CCAAGTAAACAACAATGTGAAGCATAT 59.186 33.333 0.00 0.00 40.46 1.78
2224 2614 8.641155 CAAGTAAACAACAATGTGAAGCATATG 58.359 33.333 0.00 0.00 40.46 1.78
2225 2615 7.885297 AGTAAACAACAATGTGAAGCATATGT 58.115 30.769 4.29 0.00 40.46 2.29
2226 2616 7.809331 AGTAAACAACAATGTGAAGCATATGTG 59.191 33.333 4.29 0.00 40.46 3.21
2227 2617 5.710513 ACAACAATGTGAAGCATATGTGT 57.289 34.783 4.29 0.00 38.69 3.72
2228 2618 5.463286 ACAACAATGTGAAGCATATGTGTG 58.537 37.500 4.29 0.00 38.69 3.82
2229 2619 5.009911 ACAACAATGTGAAGCATATGTGTGT 59.990 36.000 4.29 0.00 38.69 3.72
2230 2620 6.206438 ACAACAATGTGAAGCATATGTGTGTA 59.794 34.615 4.29 0.00 38.69 2.90
2231 2621 6.816134 ACAATGTGAAGCATATGTGTGTAA 57.184 33.333 4.29 0.00 36.67 2.41
2232 2622 7.213216 ACAATGTGAAGCATATGTGTGTAAA 57.787 32.000 4.29 0.00 36.67 2.01
2233 2623 7.656412 ACAATGTGAAGCATATGTGTGTAAAA 58.344 30.769 4.29 0.00 36.67 1.52
2234 2624 8.306038 ACAATGTGAAGCATATGTGTGTAAAAT 58.694 29.630 4.29 0.00 36.67 1.82
2235 2625 9.142515 CAATGTGAAGCATATGTGTGTAAAATT 57.857 29.630 4.29 0.00 36.67 1.82
2236 2626 9.709495 AATGTGAAGCATATGTGTGTAAAATTT 57.291 25.926 4.29 0.00 36.67 1.82
2237 2627 8.741101 TGTGAAGCATATGTGTGTAAAATTTC 57.259 30.769 4.29 0.00 0.00 2.17
2238 2628 8.355913 TGTGAAGCATATGTGTGTAAAATTTCA 58.644 29.630 4.29 0.00 0.00 2.69
2239 2629 8.853345 GTGAAGCATATGTGTGTAAAATTTCAG 58.147 33.333 4.29 0.00 0.00 3.02
2240 2630 8.028354 TGAAGCATATGTGTGTAAAATTTCAGG 58.972 33.333 4.29 0.00 0.00 3.86
2241 2631 7.701539 AGCATATGTGTGTAAAATTTCAGGA 57.298 32.000 4.29 0.00 0.00 3.86
2242 2632 8.297470 AGCATATGTGTGTAAAATTTCAGGAT 57.703 30.769 4.29 0.00 0.00 3.24
2243 2633 8.192774 AGCATATGTGTGTAAAATTTCAGGATG 58.807 33.333 4.29 0.00 37.54 3.51
2259 2649 6.122850 TCAGGATGAAATAGTTGAAATGCG 57.877 37.500 0.00 0.00 45.97 4.73
2260 2650 5.879777 TCAGGATGAAATAGTTGAAATGCGA 59.120 36.000 0.00 0.00 45.97 5.10
2261 2651 5.967674 CAGGATGAAATAGTTGAAATGCGAC 59.032 40.000 0.00 0.00 39.69 5.19
2262 2652 5.647658 AGGATGAAATAGTTGAAATGCGACA 59.352 36.000 0.00 0.00 32.98 4.35
2263 2653 6.319658 AGGATGAAATAGTTGAAATGCGACAT 59.680 34.615 0.00 0.00 32.98 3.06
2264 2654 6.415867 GGATGAAATAGTTGAAATGCGACATG 59.584 38.462 0.00 0.00 32.98 3.21
2265 2655 6.252967 TGAAATAGTTGAAATGCGACATGT 57.747 33.333 0.00 0.00 32.98 3.21
2266 2656 7.371126 TGAAATAGTTGAAATGCGACATGTA 57.629 32.000 0.00 0.00 32.98 2.29
2267 2657 7.240674 TGAAATAGTTGAAATGCGACATGTAC 58.759 34.615 0.00 0.00 32.98 2.90
2268 2658 6.735678 AATAGTTGAAATGCGACATGTACA 57.264 33.333 0.00 0.00 32.98 2.90
2269 2659 6.735678 ATAGTTGAAATGCGACATGTACAA 57.264 33.333 0.00 0.00 32.98 2.41
2270 2660 5.431420 AGTTGAAATGCGACATGTACAAA 57.569 34.783 0.00 0.00 32.98 2.83
2271 2661 5.826586 AGTTGAAATGCGACATGTACAAAA 58.173 33.333 0.00 0.00 32.98 2.44
2272 2662 6.269315 AGTTGAAATGCGACATGTACAAAAA 58.731 32.000 0.00 0.00 32.98 1.94
2273 2663 6.922957 AGTTGAAATGCGACATGTACAAAAAT 59.077 30.769 0.00 0.00 32.98 1.82
2274 2664 6.687653 TGAAATGCGACATGTACAAAAATG 57.312 33.333 0.00 0.00 0.00 2.32
2275 2665 6.442112 TGAAATGCGACATGTACAAAAATGA 58.558 32.000 0.00 0.00 0.00 2.57
2276 2666 6.362016 TGAAATGCGACATGTACAAAAATGAC 59.638 34.615 0.00 0.00 0.00 3.06
2277 2667 4.820284 TGCGACATGTACAAAAATGACA 57.180 36.364 0.00 0.00 0.00 3.58
2278 2668 5.175090 TGCGACATGTACAAAAATGACAA 57.825 34.783 0.00 0.00 0.00 3.18
2279 2669 4.973051 TGCGACATGTACAAAAATGACAAC 59.027 37.500 0.00 0.00 0.00 3.32
2280 2670 4.973051 GCGACATGTACAAAAATGACAACA 59.027 37.500 0.00 0.00 0.00 3.33
2281 2671 5.629020 GCGACATGTACAAAAATGACAACAT 59.371 36.000 0.00 0.00 38.50 2.71
2282 2672 6.398830 GCGACATGTACAAAAATGACAACATG 60.399 38.462 0.00 11.01 46.01 3.21
2283 2673 6.855403 CGACATGTACAAAAATGACAACATGA 59.145 34.615 17.02 0.00 44.30 3.07
2284 2674 7.538334 CGACATGTACAAAAATGACAACATGAT 59.462 33.333 17.02 5.53 44.30 2.45
2285 2675 8.746922 ACATGTACAAAAATGACAACATGATC 57.253 30.769 17.02 0.00 44.30 2.92
2286 2676 8.579006 ACATGTACAAAAATGACAACATGATCT 58.421 29.630 17.02 0.00 44.30 2.75
2287 2677 8.856247 CATGTACAAAAATGACAACATGATCTG 58.144 33.333 0.00 0.00 44.30 2.90
2288 2678 7.369607 TGTACAAAAATGACAACATGATCTGG 58.630 34.615 0.00 0.00 36.79 3.86
2289 2679 5.786311 ACAAAAATGACAACATGATCTGGG 58.214 37.500 0.00 0.00 36.79 4.45
2290 2680 5.539574 ACAAAAATGACAACATGATCTGGGA 59.460 36.000 0.00 0.00 36.79 4.37
2291 2681 5.909621 AAAATGACAACATGATCTGGGAG 57.090 39.130 0.00 0.00 36.79 4.30
2292 2682 3.572632 ATGACAACATGATCTGGGAGG 57.427 47.619 0.00 0.00 35.21 4.30
2293 2683 2.550175 TGACAACATGATCTGGGAGGA 58.450 47.619 0.00 0.00 0.00 3.71
2294 2684 3.117745 TGACAACATGATCTGGGAGGAT 58.882 45.455 0.00 0.00 0.00 3.24
2295 2685 3.118149 TGACAACATGATCTGGGAGGATG 60.118 47.826 0.00 0.00 0.00 3.51
2296 2686 3.117745 ACAACATGATCTGGGAGGATGA 58.882 45.455 0.00 0.00 0.00 2.92
2297 2687 3.524789 ACAACATGATCTGGGAGGATGAA 59.475 43.478 0.00 0.00 0.00 2.57
2298 2688 4.167502 ACAACATGATCTGGGAGGATGAAT 59.832 41.667 0.00 0.00 0.00 2.57
2299 2689 5.370584 ACAACATGATCTGGGAGGATGAATA 59.629 40.000 0.00 0.00 0.00 1.75
2300 2690 5.758790 ACATGATCTGGGAGGATGAATAG 57.241 43.478 0.00 0.00 0.00 1.73
2301 2691 5.161135 ACATGATCTGGGAGGATGAATAGT 58.839 41.667 0.00 0.00 0.00 2.12
2302 2692 6.326161 ACATGATCTGGGAGGATGAATAGTA 58.674 40.000 0.00 0.00 0.00 1.82
2303 2693 6.964679 ACATGATCTGGGAGGATGAATAGTAT 59.035 38.462 0.00 0.00 0.00 2.12
2304 2694 7.125507 ACATGATCTGGGAGGATGAATAGTATC 59.874 40.741 0.00 0.00 0.00 2.24
2305 2695 6.565036 TGATCTGGGAGGATGAATAGTATCA 58.435 40.000 0.00 0.00 0.00 2.15
2306 2696 6.438741 TGATCTGGGAGGATGAATAGTATCAC 59.561 42.308 0.00 0.00 30.82 3.06
2307 2697 4.767409 TCTGGGAGGATGAATAGTATCACG 59.233 45.833 0.00 0.00 30.82 4.35
2308 2698 4.480115 TGGGAGGATGAATAGTATCACGT 58.520 43.478 0.00 0.00 30.82 4.49
2309 2699 4.899457 TGGGAGGATGAATAGTATCACGTT 59.101 41.667 0.00 0.00 30.82 3.99
2310 2700 5.365605 TGGGAGGATGAATAGTATCACGTTT 59.634 40.000 0.00 0.00 30.82 3.60
2311 2701 6.126883 TGGGAGGATGAATAGTATCACGTTTT 60.127 38.462 0.00 0.00 30.82 2.43
2312 2702 7.070198 TGGGAGGATGAATAGTATCACGTTTTA 59.930 37.037 0.00 0.00 30.82 1.52
2313 2703 8.095169 GGGAGGATGAATAGTATCACGTTTTAT 58.905 37.037 0.00 0.00 30.82 1.40
2314 2704 9.490379 GGAGGATGAATAGTATCACGTTTTATT 57.510 33.333 0.00 0.00 30.82 1.40
2320 2710 9.048446 TGAATAGTATCACGTTTTATTAAGCCC 57.952 33.333 0.00 0.00 0.00 5.19
2321 2711 7.974482 ATAGTATCACGTTTTATTAAGCCCC 57.026 36.000 0.00 0.00 0.00 5.80
2322 2712 5.747342 AGTATCACGTTTTATTAAGCCCCA 58.253 37.500 0.00 0.00 0.00 4.96
2323 2713 6.181908 AGTATCACGTTTTATTAAGCCCCAA 58.818 36.000 0.00 0.00 0.00 4.12
2324 2714 5.986501 ATCACGTTTTATTAAGCCCCAAA 57.013 34.783 0.00 0.00 0.00 3.28
2325 2715 5.986501 TCACGTTTTATTAAGCCCCAAAT 57.013 34.783 0.00 0.00 0.00 2.32
2326 2716 6.347859 TCACGTTTTATTAAGCCCCAAATT 57.652 33.333 0.00 0.00 0.00 1.82
2327 2717 6.760291 TCACGTTTTATTAAGCCCCAAATTT 58.240 32.000 0.00 0.00 0.00 1.82
2328 2718 6.647067 TCACGTTTTATTAAGCCCCAAATTTG 59.353 34.615 11.40 11.40 0.00 2.32
2329 2719 6.425417 CACGTTTTATTAAGCCCCAAATTTGT 59.575 34.615 16.73 0.66 0.00 2.83
2330 2720 6.647481 ACGTTTTATTAAGCCCCAAATTTGTC 59.353 34.615 16.73 5.93 0.00 3.18
2331 2721 6.871492 CGTTTTATTAAGCCCCAAATTTGTCT 59.129 34.615 16.73 7.99 0.00 3.41
2332 2722 7.386573 CGTTTTATTAAGCCCCAAATTTGTCTT 59.613 33.333 16.73 16.58 0.00 3.01
2333 2723 9.062524 GTTTTATTAAGCCCCAAATTTGTCTTT 57.937 29.630 16.73 8.17 0.00 2.52
2334 2724 9.634021 TTTTATTAAGCCCCAAATTTGTCTTTT 57.366 25.926 16.73 8.48 0.00 2.27
2335 2725 8.840833 TTATTAAGCCCCAAATTTGTCTTTTC 57.159 30.769 16.73 0.74 0.00 2.29
2336 2726 6.493189 TTAAGCCCCAAATTTGTCTTTTCT 57.507 33.333 16.73 2.85 0.00 2.52
2337 2727 4.341366 AGCCCCAAATTTGTCTTTTCTG 57.659 40.909 16.73 0.00 0.00 3.02
2338 2728 2.807967 GCCCCAAATTTGTCTTTTCTGC 59.192 45.455 16.73 4.14 0.00 4.26
2339 2729 3.743899 GCCCCAAATTTGTCTTTTCTGCA 60.744 43.478 16.73 0.00 0.00 4.41
2340 2730 3.809279 CCCCAAATTTGTCTTTTCTGCAC 59.191 43.478 16.73 0.00 0.00 4.57
2341 2731 4.440880 CCCAAATTTGTCTTTTCTGCACA 58.559 39.130 16.73 0.00 0.00 4.57
2342 2732 4.874966 CCCAAATTTGTCTTTTCTGCACAA 59.125 37.500 16.73 0.00 0.00 3.33
2343 2733 5.220643 CCCAAATTTGTCTTTTCTGCACAAC 60.221 40.000 16.73 0.00 29.74 3.32
2344 2734 5.220643 CCAAATTTGTCTTTTCTGCACAACC 60.221 40.000 16.73 0.00 29.74 3.77
2345 2735 3.518634 TTTGTCTTTTCTGCACAACCC 57.481 42.857 0.00 0.00 29.74 4.11
2346 2736 1.398692 TGTCTTTTCTGCACAACCCC 58.601 50.000 0.00 0.00 0.00 4.95
2347 2737 0.673985 GTCTTTTCTGCACAACCCCC 59.326 55.000 0.00 0.00 0.00 5.40
2348 2738 0.260230 TCTTTTCTGCACAACCCCCA 59.740 50.000 0.00 0.00 0.00 4.96
2349 2739 1.133199 TCTTTTCTGCACAACCCCCAT 60.133 47.619 0.00 0.00 0.00 4.00
2350 2740 1.693606 CTTTTCTGCACAACCCCCATT 59.306 47.619 0.00 0.00 0.00 3.16
2351 2741 1.799933 TTTCTGCACAACCCCCATTT 58.200 45.000 0.00 0.00 0.00 2.32
2352 2742 1.337118 TTCTGCACAACCCCCATTTC 58.663 50.000 0.00 0.00 0.00 2.17
2353 2743 0.187117 TCTGCACAACCCCCATTTCA 59.813 50.000 0.00 0.00 0.00 2.69
2354 2744 1.203162 TCTGCACAACCCCCATTTCAT 60.203 47.619 0.00 0.00 0.00 2.57
2355 2745 1.205417 CTGCACAACCCCCATTTCATC 59.795 52.381 0.00 0.00 0.00 2.92
2356 2746 0.173255 GCACAACCCCCATTTCATCG 59.827 55.000 0.00 0.00 0.00 3.84
2357 2747 1.544724 CACAACCCCCATTTCATCGT 58.455 50.000 0.00 0.00 0.00 3.73
2358 2748 2.717390 CACAACCCCCATTTCATCGTA 58.283 47.619 0.00 0.00 0.00 3.43
2359 2749 3.287222 CACAACCCCCATTTCATCGTAT 58.713 45.455 0.00 0.00 0.00 3.06
2360 2750 3.699038 CACAACCCCCATTTCATCGTATT 59.301 43.478 0.00 0.00 0.00 1.89
2361 2751 4.159506 CACAACCCCCATTTCATCGTATTT 59.840 41.667 0.00 0.00 0.00 1.40
2362 2752 4.401202 ACAACCCCCATTTCATCGTATTTC 59.599 41.667 0.00 0.00 0.00 2.17
2363 2753 4.243793 ACCCCCATTTCATCGTATTTCA 57.756 40.909 0.00 0.00 0.00 2.69
2364 2754 4.803452 ACCCCCATTTCATCGTATTTCAT 58.197 39.130 0.00 0.00 0.00 2.57
2365 2755 5.208121 ACCCCCATTTCATCGTATTTCATT 58.792 37.500 0.00 0.00 0.00 2.57
2366 2756 5.301805 ACCCCCATTTCATCGTATTTCATTC 59.698 40.000 0.00 0.00 0.00 2.67
2367 2757 5.536161 CCCCCATTTCATCGTATTTCATTCT 59.464 40.000 0.00 0.00 0.00 2.40
2368 2758 6.441274 CCCCATTTCATCGTATTTCATTCTG 58.559 40.000 0.00 0.00 0.00 3.02
2369 2759 6.262944 CCCCATTTCATCGTATTTCATTCTGA 59.737 38.462 0.00 0.00 0.00 3.27
2370 2760 7.201812 CCCCATTTCATCGTATTTCATTCTGAA 60.202 37.037 0.00 0.00 34.03 3.02
2384 2774 7.922505 TTCATTCTGAAAATTTACACGGTTG 57.077 32.000 0.00 0.00 32.71 3.77
2385 2775 7.033530 TCATTCTGAAAATTTACACGGTTGT 57.966 32.000 0.00 0.00 40.02 3.32
2386 2776 8.155821 TCATTCTGAAAATTTACACGGTTGTA 57.844 30.769 0.00 0.00 37.15 2.41
2387 2777 8.071368 TCATTCTGAAAATTTACACGGTTGTAC 58.929 33.333 0.00 0.00 37.97 2.90
2388 2778 6.922247 TCTGAAAATTTACACGGTTGTACA 57.078 33.333 0.00 0.00 37.97 2.90
2389 2779 6.717413 TCTGAAAATTTACACGGTTGTACAC 58.283 36.000 0.00 0.00 37.97 2.90
2390 2780 6.539464 TCTGAAAATTTACACGGTTGTACACT 59.461 34.615 0.00 0.00 37.97 3.55
2391 2781 7.710044 TCTGAAAATTTACACGGTTGTACACTA 59.290 33.333 0.00 0.00 37.97 2.74
2392 2782 8.380743 TGAAAATTTACACGGTTGTACACTAT 57.619 30.769 0.00 0.00 37.97 2.12
2393 2783 8.283992 TGAAAATTTACACGGTTGTACACTATG 58.716 33.333 0.00 0.00 37.97 2.23
2394 2784 5.789710 ATTTACACGGTTGTACACTATGC 57.210 39.130 0.00 0.00 37.97 3.14
2395 2785 2.088950 ACACGGTTGTACACTATGCC 57.911 50.000 0.00 0.00 32.60 4.40
2396 2786 1.621814 ACACGGTTGTACACTATGCCT 59.378 47.619 0.00 0.00 32.60 4.75
2397 2787 2.038033 ACACGGTTGTACACTATGCCTT 59.962 45.455 0.00 0.00 32.60 4.35
2398 2788 2.671396 CACGGTTGTACACTATGCCTTC 59.329 50.000 0.00 0.00 0.00 3.46
2399 2789 2.300723 ACGGTTGTACACTATGCCTTCA 59.699 45.455 0.00 0.00 0.00 3.02
2400 2790 3.055385 ACGGTTGTACACTATGCCTTCAT 60.055 43.478 0.00 0.00 36.73 2.57
2401 2791 3.555956 CGGTTGTACACTATGCCTTCATC 59.444 47.826 0.00 0.00 34.22 2.92
2402 2792 4.680708 CGGTTGTACACTATGCCTTCATCT 60.681 45.833 0.00 0.00 34.22 2.90
2403 2793 5.451381 CGGTTGTACACTATGCCTTCATCTA 60.451 44.000 0.00 0.00 34.22 1.98
2404 2794 6.525629 GGTTGTACACTATGCCTTCATCTAT 58.474 40.000 0.00 0.00 34.22 1.98
2405 2795 6.647067 GGTTGTACACTATGCCTTCATCTATC 59.353 42.308 0.00 0.00 34.22 2.08
2406 2796 7.437748 GTTGTACACTATGCCTTCATCTATCT 58.562 38.462 0.00 0.00 34.22 1.98
2407 2797 7.220741 TGTACACTATGCCTTCATCTATCTC 57.779 40.000 0.00 0.00 34.22 2.75
2408 2798 7.007116 TGTACACTATGCCTTCATCTATCTCT 58.993 38.462 0.00 0.00 34.22 3.10
2409 2799 8.164070 TGTACACTATGCCTTCATCTATCTCTA 58.836 37.037 0.00 0.00 34.22 2.43
2410 2800 9.184523 GTACACTATGCCTTCATCTATCTCTAT 57.815 37.037 0.00 0.00 34.22 1.98
2412 2802 9.934784 ACACTATGCCTTCATCTATCTCTATAT 57.065 33.333 0.00 0.00 34.22 0.86
2476 2866 9.517609 TTCAAGAATTTTGAATTTTGCATTTGG 57.482 25.926 10.04 0.00 33.90 3.28
2477 2867 8.900781 TCAAGAATTTTGAATTTTGCATTTGGA 58.099 25.926 0.00 0.00 0.00 3.53
2478 2868 9.176181 CAAGAATTTTGAATTTTGCATTTGGAG 57.824 29.630 0.00 0.00 0.00 3.86
2479 2869 7.878036 AGAATTTTGAATTTTGCATTTGGAGG 58.122 30.769 0.00 0.00 0.00 4.30
2480 2870 5.435820 TTTTGAATTTTGCATTTGGAGGC 57.564 34.783 0.00 0.00 0.00 4.70
2481 2871 3.056588 TGAATTTTGCATTTGGAGGCC 57.943 42.857 0.00 0.00 0.00 5.19
2482 2872 2.638855 TGAATTTTGCATTTGGAGGCCT 59.361 40.909 3.86 3.86 0.00 5.19
2483 2873 3.264947 GAATTTTGCATTTGGAGGCCTC 58.735 45.455 25.59 25.59 0.00 4.70
2496 2886 2.964740 GAGGCCTCCAAAAGCAATTTC 58.035 47.619 23.19 0.00 0.00 2.17
2497 2887 1.625315 AGGCCTCCAAAAGCAATTTCC 59.375 47.619 0.00 0.00 0.00 3.13
2498 2888 1.347378 GGCCTCCAAAAGCAATTTCCA 59.653 47.619 0.00 0.00 0.00 3.53
2499 2889 2.224499 GGCCTCCAAAAGCAATTTCCAA 60.224 45.455 0.00 0.00 0.00 3.53
2500 2890 3.069289 GCCTCCAAAAGCAATTTCCAAG 58.931 45.455 0.00 0.00 0.00 3.61
2501 2891 3.244181 GCCTCCAAAAGCAATTTCCAAGA 60.244 43.478 0.00 0.00 0.00 3.02
2502 2892 4.743348 GCCTCCAAAAGCAATTTCCAAGAA 60.743 41.667 0.00 0.00 0.00 2.52
2503 2893 5.554070 CCTCCAAAAGCAATTTCCAAGAAT 58.446 37.500 0.00 0.00 0.00 2.40
2504 2894 5.999600 CCTCCAAAAGCAATTTCCAAGAATT 59.000 36.000 0.00 0.00 0.00 2.17
2505 2895 7.160726 CCTCCAAAAGCAATTTCCAAGAATTA 58.839 34.615 0.00 0.00 0.00 1.40
2540 2930 2.208872 AGGACAATGGGAATAGTGGCT 58.791 47.619 0.00 0.00 0.00 4.75
2550 2940 4.534500 TGGGAATAGTGGCTTCTTGTTCTA 59.466 41.667 0.00 0.00 0.00 2.10
2584 2974 6.366877 ACTCCATGCGAAATTTGAATTTTCTG 59.633 34.615 0.00 5.85 38.64 3.02
2604 2994 1.668751 GCGTCAGTTCTTGAACCACAA 59.331 47.619 9.58 0.00 37.61 3.33
2606 2996 2.936498 CGTCAGTTCTTGAACCACAACT 59.064 45.455 9.58 0.00 37.61 3.16
2608 2998 3.689649 GTCAGTTCTTGAACCACAACTGT 59.310 43.478 9.58 0.00 37.61 3.55
2624 3014 4.809426 ACAACTGTCTGTTACTGTTAGTGC 59.191 41.667 0.00 0.00 45.36 4.40
2631 3021 3.399330 TGTTACTGTTAGTGCAAGCCTC 58.601 45.455 0.00 0.00 0.00 4.70
2634 3024 1.417890 ACTGTTAGTGCAAGCCTCACT 59.582 47.619 7.98 7.98 45.71 3.41
2635 3025 2.158755 ACTGTTAGTGCAAGCCTCACTT 60.159 45.455 8.16 0.00 41.61 3.16
2636 3026 3.071023 ACTGTTAGTGCAAGCCTCACTTA 59.929 43.478 8.16 0.00 41.61 2.24
2638 3028 2.742589 GTTAGTGCAAGCCTCACTTACC 59.257 50.000 8.16 0.00 41.61 2.85
2640 3030 1.352352 AGTGCAAGCCTCACTTACCAT 59.648 47.619 0.00 0.00 41.61 3.55
2641 3031 1.740025 GTGCAAGCCTCACTTACCATC 59.260 52.381 0.00 0.00 36.04 3.51
2645 3035 3.411446 CAAGCCTCACTTACCATCAACA 58.589 45.455 0.00 0.00 36.04 3.33
2646 3036 3.788227 AGCCTCACTTACCATCAACAA 57.212 42.857 0.00 0.00 0.00 2.83
2648 3038 4.666512 AGCCTCACTTACCATCAACAAAT 58.333 39.130 0.00 0.00 0.00 2.32
2649 3039 4.702131 AGCCTCACTTACCATCAACAAATC 59.298 41.667 0.00 0.00 0.00 2.17
2650 3040 4.437390 GCCTCACTTACCATCAACAAATCG 60.437 45.833 0.00 0.00 0.00 3.34
2655 3045 6.021596 CACTTACCATCAACAAATCGTAAGC 58.978 40.000 0.00 0.00 37.33 3.09
2660 3050 6.276847 ACCATCAACAAATCGTAAGCAAAAA 58.723 32.000 0.00 0.00 37.18 1.94
2675 3065 2.930455 GCAAAAATAACTGGTGGCGCAT 60.930 45.455 10.83 0.00 0.00 4.73
2689 3079 2.351418 TGGCGCATTTCGATAGTTCAAG 59.649 45.455 10.83 0.00 41.67 3.02
2706 3096 9.699410 ATAGTTCAAGAATCCATTTGAATACCA 57.301 29.630 3.35 0.00 43.03 3.25
2728 3118 6.603201 ACCAACGGATATGAAACTCAATTGAT 59.397 34.615 8.96 0.00 0.00 2.57
2803 3193 5.330455 TGTACCAAAATCAAACTGCACAA 57.670 34.783 0.00 0.00 0.00 3.33
2816 3206 7.946207 TCAAACTGCACAAGAATAAAACCATA 58.054 30.769 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.247736 GAGAGCTCGGGTGACAACAT 59.752 55.000 8.37 0.00 0.00 2.71
1 2 1.666011 GAGAGCTCGGGTGACAACA 59.334 57.895 8.37 0.00 0.00 3.33
2 3 1.079750 GGAGAGCTCGGGTGACAAC 60.080 63.158 8.37 0.00 0.00 3.32
3 4 1.228894 AGGAGAGCTCGGGTGACAA 60.229 57.895 8.37 0.00 0.00 3.18
4 5 1.679305 GAGGAGAGCTCGGGTGACA 60.679 63.158 8.37 0.00 0.00 3.58
5 6 0.968393 AAGAGGAGAGCTCGGGTGAC 60.968 60.000 8.37 0.00 0.00 3.67
6 7 0.681564 GAAGAGGAGAGCTCGGGTGA 60.682 60.000 8.37 0.00 0.00 4.02
7 8 1.813192 GAAGAGGAGAGCTCGGGTG 59.187 63.158 8.37 0.00 0.00 4.61
8 9 1.751162 CGAAGAGGAGAGCTCGGGT 60.751 63.158 8.37 0.00 0.00 5.28
9 10 1.720694 GACGAAGAGGAGAGCTCGGG 61.721 65.000 8.37 0.00 0.00 5.14
10 11 1.720694 GGACGAAGAGGAGAGCTCGG 61.721 65.000 8.37 0.00 0.00 4.63
11 12 1.720694 GGGACGAAGAGGAGAGCTCG 61.721 65.000 8.37 0.00 0.00 5.03
12 13 0.395173 AGGGACGAAGAGGAGAGCTC 60.395 60.000 5.27 5.27 0.00 4.09
13 14 0.395173 GAGGGACGAAGAGGAGAGCT 60.395 60.000 0.00 0.00 0.00 4.09
14 15 1.388837 GGAGGGACGAAGAGGAGAGC 61.389 65.000 0.00 0.00 0.00 4.09
15 16 0.033991 TGGAGGGACGAAGAGGAGAG 60.034 60.000 0.00 0.00 0.00 3.20
16 17 0.033991 CTGGAGGGACGAAGAGGAGA 60.034 60.000 0.00 0.00 0.00 3.71
17 18 1.040339 CCTGGAGGGACGAAGAGGAG 61.040 65.000 0.00 0.00 37.23 3.69
18 19 1.000486 CCTGGAGGGACGAAGAGGA 60.000 63.158 0.00 0.00 37.23 3.71
19 20 0.614979 TTCCTGGAGGGACGAAGAGG 60.615 60.000 0.00 0.00 45.03 3.69
20 21 0.820871 CTTCCTGGAGGGACGAAGAG 59.179 60.000 0.00 0.00 45.03 2.85
21 22 1.258445 GCTTCCTGGAGGGACGAAGA 61.258 60.000 8.00 0.00 45.03 2.87
22 23 1.219393 GCTTCCTGGAGGGACGAAG 59.781 63.158 8.00 0.00 45.03 3.79
23 24 2.291043 GGCTTCCTGGAGGGACGAA 61.291 63.158 8.00 0.00 45.03 3.85
24 25 2.683933 GGCTTCCTGGAGGGACGA 60.684 66.667 8.00 0.00 45.03 4.20
25 26 1.915078 AATGGCTTCCTGGAGGGACG 61.915 60.000 8.00 0.00 45.03 4.79
26 27 0.106967 GAATGGCTTCCTGGAGGGAC 60.107 60.000 8.00 2.95 45.03 4.46
27 28 0.253347 AGAATGGCTTCCTGGAGGGA 60.253 55.000 8.00 0.00 43.41 4.20
28 29 0.182299 GAGAATGGCTTCCTGGAGGG 59.818 60.000 8.00 1.42 35.41 4.30
29 30 0.914644 TGAGAATGGCTTCCTGGAGG 59.085 55.000 0.66 0.66 31.27 4.30
30 31 2.363683 GTTGAGAATGGCTTCCTGGAG 58.636 52.381 0.00 0.00 31.27 3.86
31 32 1.339055 CGTTGAGAATGGCTTCCTGGA 60.339 52.381 0.00 0.00 31.27 3.86
32 33 1.089920 CGTTGAGAATGGCTTCCTGG 58.910 55.000 0.00 0.00 31.27 4.45
33 34 0.449388 GCGTTGAGAATGGCTTCCTG 59.551 55.000 0.00 0.00 31.27 3.86
34 35 0.678048 GGCGTTGAGAATGGCTTCCT 60.678 55.000 0.00 0.00 39.65 3.36
35 36 1.803289 GGCGTTGAGAATGGCTTCC 59.197 57.895 0.00 0.00 39.65 3.46
36 37 1.019278 TCGGCGTTGAGAATGGCTTC 61.019 55.000 6.85 0.00 40.52 3.86
37 38 1.003839 TCGGCGTTGAGAATGGCTT 60.004 52.632 6.85 0.00 40.52 4.35
38 39 1.741770 GTCGGCGTTGAGAATGGCT 60.742 57.895 6.85 0.00 40.52 4.75
39 40 2.785258 GTCGGCGTTGAGAATGGC 59.215 61.111 6.85 0.00 39.40 4.40
40 41 1.413767 CTCGTCGGCGTTGAGAATGG 61.414 60.000 20.77 0.52 39.49 3.16
41 42 0.732880 ACTCGTCGGCGTTGAGAATG 60.733 55.000 28.13 7.39 39.49 2.67
42 43 0.806868 TACTCGTCGGCGTTGAGAAT 59.193 50.000 28.13 15.06 39.49 2.40
43 44 0.592637 TTACTCGTCGGCGTTGAGAA 59.407 50.000 28.13 18.16 39.49 2.87
44 45 0.167470 CTTACTCGTCGGCGTTGAGA 59.833 55.000 28.13 14.39 39.49 3.27
45 46 0.167470 TCTTACTCGTCGGCGTTGAG 59.833 55.000 22.66 22.66 39.49 3.02
46 47 0.592637 TTCTTACTCGTCGGCGTTGA 59.407 50.000 10.18 5.16 39.49 3.18
47 48 1.320555 CATTCTTACTCGTCGGCGTTG 59.679 52.381 10.18 6.47 39.49 4.10
48 49 1.200716 TCATTCTTACTCGTCGGCGTT 59.799 47.619 10.18 0.00 39.49 4.84
49 50 0.806868 TCATTCTTACTCGTCGGCGT 59.193 50.000 10.18 0.00 39.49 5.68
50 51 1.781429 CATCATTCTTACTCGTCGGCG 59.219 52.381 1.15 1.15 39.92 6.46
51 52 2.128035 CCATCATTCTTACTCGTCGGC 58.872 52.381 0.00 0.00 0.00 5.54
52 53 2.128035 GCCATCATTCTTACTCGTCGG 58.872 52.381 0.00 0.00 0.00 4.79
53 54 1.781429 CGCCATCATTCTTACTCGTCG 59.219 52.381 0.00 0.00 0.00 5.12
54 55 2.128035 CCGCCATCATTCTTACTCGTC 58.872 52.381 0.00 0.00 0.00 4.20
55 56 1.806623 GCCGCCATCATTCTTACTCGT 60.807 52.381 0.00 0.00 0.00 4.18
56 57 0.861837 GCCGCCATCATTCTTACTCG 59.138 55.000 0.00 0.00 0.00 4.18
57 58 0.861837 CGCCGCCATCATTCTTACTC 59.138 55.000 0.00 0.00 0.00 2.59
58 59 0.532862 CCGCCGCCATCATTCTTACT 60.533 55.000 0.00 0.00 0.00 2.24
59 60 1.941812 CCGCCGCCATCATTCTTAC 59.058 57.895 0.00 0.00 0.00 2.34
60 61 1.891919 GCCGCCGCCATCATTCTTA 60.892 57.895 0.00 0.00 0.00 2.10
61 62 3.211963 GCCGCCGCCATCATTCTT 61.212 61.111 0.00 0.00 0.00 2.52
62 63 4.488136 TGCCGCCGCCATCATTCT 62.488 61.111 0.00 0.00 0.00 2.40
63 64 3.957535 CTGCCGCCGCCATCATTC 61.958 66.667 0.00 0.00 0.00 2.67
81 82 2.780149 CTTTTTCGACCTTGCCGCCG 62.780 60.000 0.00 0.00 0.00 6.46
82 83 1.081442 CTTTTTCGACCTTGCCGCC 60.081 57.895 0.00 0.00 0.00 6.13
83 84 1.081442 CCTTTTTCGACCTTGCCGC 60.081 57.895 0.00 0.00 0.00 6.53
84 85 0.517316 CTCCTTTTTCGACCTTGCCG 59.483 55.000 0.00 0.00 0.00 5.69
85 86 1.807142 CTCTCCTTTTTCGACCTTGCC 59.193 52.381 0.00 0.00 0.00 4.52
86 87 2.739379 CTCTCTCCTTTTTCGACCTTGC 59.261 50.000 0.00 0.00 0.00 4.01
87 88 4.021894 TCTCTCTCTCCTTTTTCGACCTTG 60.022 45.833 0.00 0.00 0.00 3.61
88 89 4.153411 TCTCTCTCTCCTTTTTCGACCTT 58.847 43.478 0.00 0.00 0.00 3.50
89 90 3.761752 CTCTCTCTCTCCTTTTTCGACCT 59.238 47.826 0.00 0.00 0.00 3.85
90 91 3.759618 TCTCTCTCTCTCCTTTTTCGACC 59.240 47.826 0.00 0.00 0.00 4.79
91 92 4.698304 TCTCTCTCTCTCTCCTTTTTCGAC 59.302 45.833 0.00 0.00 0.00 4.20
92 93 4.912586 TCTCTCTCTCTCTCCTTTTTCGA 58.087 43.478 0.00 0.00 0.00 3.71
93 94 4.941263 TCTCTCTCTCTCTCTCCTTTTTCG 59.059 45.833 0.00 0.00 0.00 3.46
94 95 6.180472 TCTCTCTCTCTCTCTCTCCTTTTTC 58.820 44.000 0.00 0.00 0.00 2.29
95 96 6.012508 TCTCTCTCTCTCTCTCTCTCCTTTTT 60.013 42.308 0.00 0.00 0.00 1.94
96 97 5.488919 TCTCTCTCTCTCTCTCTCTCCTTTT 59.511 44.000 0.00 0.00 0.00 2.27
97 98 5.032846 TCTCTCTCTCTCTCTCTCTCCTTT 58.967 45.833 0.00 0.00 0.00 3.11
98 99 4.624913 TCTCTCTCTCTCTCTCTCTCCTT 58.375 47.826 0.00 0.00 0.00 3.36
99 100 4.078922 TCTCTCTCTCTCTCTCTCTCTCCT 60.079 50.000 0.00 0.00 0.00 3.69
100 101 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
101 102 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
102 103 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
103 104 5.452078 CTCTCTCTCTCTCTCTCTCTCTC 57.548 52.174 0.00 0.00 0.00 3.20
432 433 0.385390 CAAAAAGGCACGACCAGCTT 59.615 50.000 0.00 0.00 43.14 3.74
566 567 7.497925 AAACTACCAAGTCAGAAAAGTGATC 57.502 36.000 0.00 0.00 33.75 2.92
567 568 7.881775 AAAACTACCAAGTCAGAAAAGTGAT 57.118 32.000 0.00 0.00 33.75 3.06
568 569 7.696992 AAAAACTACCAAGTCAGAAAAGTGA 57.303 32.000 0.00 0.00 33.75 3.41
633 634 8.867097 CCCTATAGCTGAAAACTACCACTATAA 58.133 37.037 0.00 0.00 0.00 0.98
634 635 8.008922 ACCCTATAGCTGAAAACTACCACTATA 58.991 37.037 0.00 0.00 0.00 1.31
655 656 4.600111 ACTACCACTTTCCATTCAACCCTA 59.400 41.667 0.00 0.00 0.00 3.53
656 657 3.397955 ACTACCACTTTCCATTCAACCCT 59.602 43.478 0.00 0.00 0.00 4.34
764 772 2.819608 TGCCCTTCGGATCTTTTTCTTG 59.180 45.455 0.00 0.00 0.00 3.02
793 801 1.414181 CACTAACGATGGGGCTGATCT 59.586 52.381 0.00 0.00 0.00 2.75
799 807 1.819632 CAGCCACTAACGATGGGGC 60.820 63.158 11.21 11.21 44.92 5.80
887 896 1.204467 GAGCTTCTCTGAGTGACCTGG 59.796 57.143 4.32 0.00 0.00 4.45
888 897 1.891811 TGAGCTTCTCTGAGTGACCTG 59.108 52.381 4.32 0.00 0.00 4.00
889 898 2.298729 GTTGAGCTTCTCTGAGTGACCT 59.701 50.000 4.32 0.00 0.00 3.85
890 899 2.682836 GTTGAGCTTCTCTGAGTGACC 58.317 52.381 4.32 0.00 0.00 4.02
895 904 0.246086 AGCCGTTGAGCTTCTCTGAG 59.754 55.000 0.00 0.00 41.41 3.35
902 911 0.254178 ATGGATGAGCCGTTGAGCTT 59.746 50.000 0.00 0.00 45.15 3.74
937 946 0.523757 GCTCAACGTAGGCGAGAGAC 60.524 60.000 14.32 6.02 42.00 3.36
938 947 1.654954 GGCTCAACGTAGGCGAGAGA 61.655 60.000 14.32 1.54 42.00 3.10
1181 1208 5.654603 TGGAAACATACGTGACTATGTCT 57.345 39.130 0.00 0.00 36.50 3.41
1227 1254 0.469144 ATTTCAACGGTGTTGGGCCT 60.469 50.000 4.53 0.00 0.00 5.19
1228 1255 0.391228 AATTTCAACGGTGTTGGGCC 59.609 50.000 0.00 0.00 0.00 5.80
1229 1256 1.778334 GAATTTCAACGGTGTTGGGC 58.222 50.000 0.00 0.00 0.00 5.36
1230 1257 1.335496 ACGAATTTCAACGGTGTTGGG 59.665 47.619 0.00 0.00 0.00 4.12
1231 1258 2.223386 ACACGAATTTCAACGGTGTTGG 60.223 45.455 0.00 0.00 0.00 3.77
1232 1259 2.781101 CACACGAATTTCAACGGTGTTG 59.219 45.455 0.00 3.33 0.00 3.33
1233 1260 2.793237 GCACACGAATTTCAACGGTGTT 60.793 45.455 0.00 0.00 35.19 3.32
1234 1261 1.268335 GCACACGAATTTCAACGGTGT 60.268 47.619 0.00 3.00 35.19 4.16
1235 1262 1.394697 GCACACGAATTTCAACGGTG 58.605 50.000 0.00 0.00 35.53 4.94
1357 1386 2.483441 GAGAGTAGCTCGCTGACCA 58.517 57.895 0.85 0.00 35.36 4.02
1365 1394 1.752683 TGGAACGGAGAGAGTAGCTC 58.247 55.000 0.00 0.00 44.29 4.09
1373 1402 3.846360 ACGAGTAATTTGGAACGGAGAG 58.154 45.455 0.00 0.00 0.00 3.20
1374 1403 3.671433 CGACGAGTAATTTGGAACGGAGA 60.671 47.826 0.00 0.00 0.00 3.71
1378 1407 1.990563 AGCGACGAGTAATTTGGAACG 59.009 47.619 0.00 0.00 0.00 3.95
1379 1408 2.991190 TCAGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
1380 1409 3.306917 TCAGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
1381 1410 3.306917 TTCAGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
1383 1412 4.092821 TCCATTTCAGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
1385 1414 3.857052 TCCATTTCAGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
1386 1415 3.520290 TCCATTTCAGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
1388 1417 2.165641 ACATCCATTTCAGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
1390 1419 1.645034 ACATCCATTTCAGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
1391 1420 2.951457 TACATCCATTTCAGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
1392 1421 3.384668 AGATACATCCATTTCAGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
1393 1422 5.773575 TCTAGATACATCCATTTCAGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
1394 1423 6.405278 TTCTAGATACATCCATTTCAGCGA 57.595 37.500 0.00 0.00 0.00 4.93
1395 1424 7.664082 AATTCTAGATACATCCATTTCAGCG 57.336 36.000 0.00 0.00 0.00 5.18
1422 1451 8.191446 GCACGTATGGATGTATCTAGATGTATT 58.809 37.037 15.79 0.00 29.44 1.89
1423 1452 7.467403 CGCACGTATGGATGTATCTAGATGTAT 60.467 40.741 15.79 9.11 29.44 2.29
1424 1453 6.183360 CGCACGTATGGATGTATCTAGATGTA 60.183 42.308 15.79 4.44 29.44 2.29
1425 1454 5.392057 CGCACGTATGGATGTATCTAGATGT 60.392 44.000 15.79 1.25 30.36 3.06
1426 1455 5.030936 CGCACGTATGGATGTATCTAGATG 58.969 45.833 15.79 0.00 0.00 2.90
1427 1456 4.941873 TCGCACGTATGGATGTATCTAGAT 59.058 41.667 10.73 10.73 0.00 1.98
1443 1472 1.065358 CCGAATTACTTGTCGCACGT 58.935 50.000 0.00 0.00 35.93 4.49
1444 1473 1.342555 TCCGAATTACTTGTCGCACG 58.657 50.000 0.00 0.00 35.93 5.34
1445 1474 2.471749 CGTTCCGAATTACTTGTCGCAC 60.472 50.000 0.00 0.00 35.93 5.34
1446 1475 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
1448 1477 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
1461 1490 1.957765 GCAGGTACTCCCTCCGTTCC 61.958 65.000 0.00 0.00 43.86 3.62
1476 1505 5.069318 TGAGATGAGATAGTGTAGAGCAGG 58.931 45.833 0.00 0.00 0.00 4.85
1477 1506 6.822667 ATGAGATGAGATAGTGTAGAGCAG 57.177 41.667 0.00 0.00 0.00 4.24
1530 1559 9.932207 TTCAGAATTCATTCAGTGCAAATTAAT 57.068 25.926 8.44 0.00 39.23 1.40
1633 1662 4.142160 ACTTTTCTTTGTTCTGCTTGGACC 60.142 41.667 0.00 0.00 0.00 4.46
1671 1700 2.611292 CGGCTAGAGCTTCAAAATCTGG 59.389 50.000 0.81 0.00 41.70 3.86
1673 1702 2.284190 GCGGCTAGAGCTTCAAAATCT 58.716 47.619 0.81 0.00 41.70 2.40
1691 1720 0.038159 ACAAGAGGAGAAGAACGGCG 60.038 55.000 4.80 4.80 0.00 6.46
1771 1800 1.205655 TCTCGTTCCTGAGAGCAATGG 59.794 52.381 0.00 0.00 40.01 3.16
1779 1808 1.953686 GATCTCCCTCTCGTTCCTGAG 59.046 57.143 0.00 0.00 37.33 3.35
1900 1929 3.652869 TGTTCATTCCCCAACTCTCTTCT 59.347 43.478 0.00 0.00 0.00 2.85
1904 1933 3.339141 GTCTGTTCATTCCCCAACTCTC 58.661 50.000 0.00 0.00 0.00 3.20
2010 2039 6.615264 TTCTCTAGTAACTATGCTACCACG 57.385 41.667 0.00 0.00 0.00 4.94
2047 2079 3.221771 CCACTGTTCATTTCCCACTCAA 58.778 45.455 0.00 0.00 0.00 3.02
2052 2084 0.187117 TGCCCACTGTTCATTTCCCA 59.813 50.000 0.00 0.00 0.00 4.37
2056 2088 2.499289 TGTGTTTGCCCACTGTTCATTT 59.501 40.909 0.00 0.00 36.30 2.32
2057 2089 2.106566 TGTGTTTGCCCACTGTTCATT 58.893 42.857 0.00 0.00 36.30 2.57
2067 2457 3.568007 TGAACTAGATTGTGTGTTTGCCC 59.432 43.478 0.00 0.00 0.00 5.36
2074 2464 6.148315 TCTGCAATTCTGAACTAGATTGTGTG 59.852 38.462 0.00 0.00 34.80 3.82
2093 2483 1.000385 CCAAAACGCCATTCTCTGCAA 60.000 47.619 0.00 0.00 0.00 4.08
2094 2484 0.597568 CCAAAACGCCATTCTCTGCA 59.402 50.000 0.00 0.00 0.00 4.41
2097 2487 1.168714 GAGCCAAAACGCCATTCTCT 58.831 50.000 0.00 0.00 0.00 3.10
2098 2488 1.131315 GAGAGCCAAAACGCCATTCTC 59.869 52.381 0.00 0.00 0.00 2.87
2099 2489 1.168714 GAGAGCCAAAACGCCATTCT 58.831 50.000 0.00 0.00 0.00 2.40
2100 2490 0.179189 CGAGAGCCAAAACGCCATTC 60.179 55.000 0.00 0.00 0.00 2.67
2101 2491 1.586154 CCGAGAGCCAAAACGCCATT 61.586 55.000 0.00 0.00 0.00 3.16
2102 2492 2.040544 CCGAGAGCCAAAACGCCAT 61.041 57.895 0.00 0.00 0.00 4.40
2103 2493 2.668212 CCGAGAGCCAAAACGCCA 60.668 61.111 0.00 0.00 0.00 5.69
2104 2494 4.103103 GCCGAGAGCCAAAACGCC 62.103 66.667 0.00 0.00 34.35 5.68
2113 2503 1.227497 CTCCATCAAGGCCGAGAGC 60.227 63.158 0.00 0.00 42.60 4.09
2114 2504 1.445095 CCTCCATCAAGGCCGAGAG 59.555 63.158 0.00 0.00 37.29 3.20
2115 2505 3.634202 CCTCCATCAAGGCCGAGA 58.366 61.111 0.00 0.00 37.29 4.04
2121 2511 1.767759 AAAATCGGCCTCCATCAAGG 58.232 50.000 0.00 0.00 39.62 3.61
2188 2578 9.660180 ACATTGTTGTTTACTTGGTACAATTTT 57.340 25.926 0.00 0.00 36.46 1.82
2189 2579 9.092876 CACATTGTTGTTTACTTGGTACAATTT 57.907 29.630 0.00 0.00 37.52 1.82
2190 2580 8.470805 TCACATTGTTGTTTACTTGGTACAATT 58.529 29.630 0.00 0.00 37.52 2.32
2191 2581 8.001881 TCACATTGTTGTTTACTTGGTACAAT 57.998 30.769 0.00 0.00 37.52 2.71
2192 2582 7.392494 TCACATTGTTGTTTACTTGGTACAA 57.608 32.000 0.00 0.00 37.52 2.41
2193 2583 7.392494 TTCACATTGTTGTTTACTTGGTACA 57.608 32.000 0.00 0.00 32.34 2.90
2194 2584 6.416750 GCTTCACATTGTTGTTTACTTGGTAC 59.583 38.462 0.00 0.00 32.34 3.34
2195 2585 6.095580 TGCTTCACATTGTTGTTTACTTGGTA 59.904 34.615 0.00 0.00 32.34 3.25
2196 2586 5.105554 TGCTTCACATTGTTGTTTACTTGGT 60.106 36.000 0.00 0.00 32.34 3.67
2197 2587 5.347342 TGCTTCACATTGTTGTTTACTTGG 58.653 37.500 0.00 0.00 32.34 3.61
2198 2588 8.641155 CATATGCTTCACATTGTTGTTTACTTG 58.359 33.333 0.00 0.00 40.38 3.16
2199 2589 8.359642 ACATATGCTTCACATTGTTGTTTACTT 58.640 29.630 1.58 0.00 40.38 2.24
2200 2590 7.809331 CACATATGCTTCACATTGTTGTTTACT 59.191 33.333 1.58 0.00 40.38 2.24
2201 2591 7.594758 ACACATATGCTTCACATTGTTGTTTAC 59.405 33.333 1.58 0.00 40.38 2.01
2202 2592 7.594386 CACACATATGCTTCACATTGTTGTTTA 59.406 33.333 1.58 0.00 40.38 2.01
2203 2593 6.421501 CACACATATGCTTCACATTGTTGTTT 59.578 34.615 1.58 0.00 40.38 2.83
2204 2594 5.921976 CACACATATGCTTCACATTGTTGTT 59.078 36.000 1.58 0.00 40.38 2.83
2205 2595 5.009911 ACACACATATGCTTCACATTGTTGT 59.990 36.000 1.58 0.00 40.38 3.32
2206 2596 5.463286 ACACACATATGCTTCACATTGTTG 58.537 37.500 1.58 0.00 40.38 3.33
2207 2597 5.710513 ACACACATATGCTTCACATTGTT 57.289 34.783 1.58 0.00 40.38 2.83
2208 2598 6.816134 TTACACACATATGCTTCACATTGT 57.184 33.333 1.58 0.00 40.38 2.71
2209 2599 8.692110 ATTTTACACACATATGCTTCACATTG 57.308 30.769 1.58 0.00 40.38 2.82
2210 2600 9.709495 AAATTTTACACACATATGCTTCACATT 57.291 25.926 1.58 0.00 40.38 2.71
2211 2601 9.357652 GAAATTTTACACACATATGCTTCACAT 57.642 29.630 1.58 0.00 43.18 3.21
2212 2602 8.355913 TGAAATTTTACACACATATGCTTCACA 58.644 29.630 1.58 0.00 0.00 3.58
2213 2603 8.741101 TGAAATTTTACACACATATGCTTCAC 57.259 30.769 1.58 0.00 0.00 3.18
2214 2604 8.028354 CCTGAAATTTTACACACATATGCTTCA 58.972 33.333 1.58 0.00 0.00 3.02
2215 2605 8.243426 TCCTGAAATTTTACACACATATGCTTC 58.757 33.333 1.58 0.00 0.00 3.86
2216 2606 8.121305 TCCTGAAATTTTACACACATATGCTT 57.879 30.769 1.58 0.00 0.00 3.91
2217 2607 7.701539 TCCTGAAATTTTACACACATATGCT 57.298 32.000 1.58 0.00 0.00 3.79
2218 2608 8.190122 TCATCCTGAAATTTTACACACATATGC 58.810 33.333 1.58 0.00 0.00 3.14
2235 2625 6.374053 TCGCATTTCAACTATTTCATCCTGAA 59.626 34.615 0.00 0.00 34.03 3.02
2236 2626 5.879777 TCGCATTTCAACTATTTCATCCTGA 59.120 36.000 0.00 0.00 0.00 3.86
2237 2627 5.967674 GTCGCATTTCAACTATTTCATCCTG 59.032 40.000 0.00 0.00 0.00 3.86
2238 2628 5.647658 TGTCGCATTTCAACTATTTCATCCT 59.352 36.000 0.00 0.00 0.00 3.24
2239 2629 5.879237 TGTCGCATTTCAACTATTTCATCC 58.121 37.500 0.00 0.00 0.00 3.51
2240 2630 6.968904 ACATGTCGCATTTCAACTATTTCATC 59.031 34.615 0.00 0.00 0.00 2.92
2241 2631 6.855836 ACATGTCGCATTTCAACTATTTCAT 58.144 32.000 0.00 0.00 0.00 2.57
2242 2632 6.252967 ACATGTCGCATTTCAACTATTTCA 57.747 33.333 0.00 0.00 0.00 2.69
2243 2633 7.240674 TGTACATGTCGCATTTCAACTATTTC 58.759 34.615 0.00 0.00 0.00 2.17
2244 2634 7.139896 TGTACATGTCGCATTTCAACTATTT 57.860 32.000 0.00 0.00 0.00 1.40
2245 2635 6.735678 TGTACATGTCGCATTTCAACTATT 57.264 33.333 0.00 0.00 0.00 1.73
2246 2636 6.735678 TTGTACATGTCGCATTTCAACTAT 57.264 33.333 0.00 0.00 0.00 2.12
2247 2637 6.546972 TTTGTACATGTCGCATTTCAACTA 57.453 33.333 0.00 0.00 0.00 2.24
2248 2638 5.431420 TTTGTACATGTCGCATTTCAACT 57.569 34.783 0.00 0.00 0.00 3.16
2249 2639 6.503616 TTTTTGTACATGTCGCATTTCAAC 57.496 33.333 0.00 0.00 0.00 3.18
2250 2640 6.920210 TCATTTTTGTACATGTCGCATTTCAA 59.080 30.769 0.00 0.00 0.00 2.69
2251 2641 6.362016 GTCATTTTTGTACATGTCGCATTTCA 59.638 34.615 0.00 0.00 0.00 2.69
2252 2642 6.362016 TGTCATTTTTGTACATGTCGCATTTC 59.638 34.615 0.00 0.00 0.00 2.17
2253 2643 6.212235 TGTCATTTTTGTACATGTCGCATTT 58.788 32.000 0.00 0.00 0.00 2.32
2254 2644 5.767269 TGTCATTTTTGTACATGTCGCATT 58.233 33.333 0.00 0.00 0.00 3.56
2255 2645 5.369685 TGTCATTTTTGTACATGTCGCAT 57.630 34.783 0.00 0.00 0.00 4.73
2256 2646 4.820284 TGTCATTTTTGTACATGTCGCA 57.180 36.364 0.00 0.00 0.00 5.10
2257 2647 4.973051 TGTTGTCATTTTTGTACATGTCGC 59.027 37.500 0.00 0.00 0.00 5.19
2258 2648 6.855403 TCATGTTGTCATTTTTGTACATGTCG 59.145 34.615 0.00 0.00 41.99 4.35
2259 2649 8.746922 ATCATGTTGTCATTTTTGTACATGTC 57.253 30.769 0.00 0.00 41.99 3.06
2260 2650 8.579006 AGATCATGTTGTCATTTTTGTACATGT 58.421 29.630 2.69 2.69 41.99 3.21
2261 2651 8.856247 CAGATCATGTTGTCATTTTTGTACATG 58.144 33.333 0.00 0.00 42.43 3.21
2262 2652 8.030692 CCAGATCATGTTGTCATTTTTGTACAT 58.969 33.333 0.00 0.00 31.15 2.29
2263 2653 7.369607 CCAGATCATGTTGTCATTTTTGTACA 58.630 34.615 0.00 0.00 31.15 2.90
2264 2654 6.808212 CCCAGATCATGTTGTCATTTTTGTAC 59.192 38.462 0.00 0.00 31.15 2.90
2265 2655 6.718912 TCCCAGATCATGTTGTCATTTTTGTA 59.281 34.615 0.00 0.00 31.15 2.41
2266 2656 5.539574 TCCCAGATCATGTTGTCATTTTTGT 59.460 36.000 0.00 0.00 31.15 2.83
2267 2657 6.028146 TCCCAGATCATGTTGTCATTTTTG 57.972 37.500 0.00 0.00 31.15 2.44
2268 2658 5.186409 CCTCCCAGATCATGTTGTCATTTTT 59.814 40.000 0.00 0.00 31.15 1.94
2269 2659 4.708421 CCTCCCAGATCATGTTGTCATTTT 59.292 41.667 0.00 0.00 31.15 1.82
2270 2660 4.018141 TCCTCCCAGATCATGTTGTCATTT 60.018 41.667 0.00 0.00 31.15 2.32
2271 2661 3.524789 TCCTCCCAGATCATGTTGTCATT 59.475 43.478 0.00 0.00 31.15 2.57
2272 2662 3.117745 TCCTCCCAGATCATGTTGTCAT 58.882 45.455 0.00 0.00 34.21 3.06
2273 2663 2.550175 TCCTCCCAGATCATGTTGTCA 58.450 47.619 0.00 0.00 0.00 3.58
2274 2664 3.135348 TCATCCTCCCAGATCATGTTGTC 59.865 47.826 0.00 0.00 0.00 3.18
2275 2665 3.117745 TCATCCTCCCAGATCATGTTGT 58.882 45.455 0.00 0.00 0.00 3.32
2276 2666 3.851458 TCATCCTCCCAGATCATGTTG 57.149 47.619 0.00 0.00 0.00 3.33
2277 2667 5.610132 ACTATTCATCCTCCCAGATCATGTT 59.390 40.000 0.00 0.00 0.00 2.71
2278 2668 5.161135 ACTATTCATCCTCCCAGATCATGT 58.839 41.667 0.00 0.00 0.00 3.21
2279 2669 5.758790 ACTATTCATCCTCCCAGATCATG 57.241 43.478 0.00 0.00 0.00 3.07
2280 2670 7.125507 GTGATACTATTCATCCTCCCAGATCAT 59.874 40.741 0.00 0.00 0.00 2.45
2281 2671 6.438741 GTGATACTATTCATCCTCCCAGATCA 59.561 42.308 0.00 0.00 0.00 2.92
2282 2672 6.405286 CGTGATACTATTCATCCTCCCAGATC 60.405 46.154 0.00 0.00 0.00 2.75
2283 2673 5.420421 CGTGATACTATTCATCCTCCCAGAT 59.580 44.000 0.00 0.00 0.00 2.90
2284 2674 4.767409 CGTGATACTATTCATCCTCCCAGA 59.233 45.833 0.00 0.00 0.00 3.86
2285 2675 4.524714 ACGTGATACTATTCATCCTCCCAG 59.475 45.833 0.00 0.00 0.00 4.45
2286 2676 4.480115 ACGTGATACTATTCATCCTCCCA 58.520 43.478 0.00 0.00 0.00 4.37
2287 2677 5.470047 AACGTGATACTATTCATCCTCCC 57.530 43.478 0.00 0.00 0.00 4.30
2288 2678 9.490379 AATAAAACGTGATACTATTCATCCTCC 57.510 33.333 0.00 0.00 0.00 4.30
2294 2684 9.048446 GGGCTTAATAAAACGTGATACTATTCA 57.952 33.333 0.00 0.00 0.00 2.57
2295 2685 8.501580 GGGGCTTAATAAAACGTGATACTATTC 58.498 37.037 0.00 0.00 0.00 1.75
2296 2686 7.994334 TGGGGCTTAATAAAACGTGATACTATT 59.006 33.333 0.00 0.00 0.00 1.73
2297 2687 7.511268 TGGGGCTTAATAAAACGTGATACTAT 58.489 34.615 0.00 0.00 0.00 2.12
2298 2688 6.887013 TGGGGCTTAATAAAACGTGATACTA 58.113 36.000 0.00 0.00 0.00 1.82
2299 2689 5.747342 TGGGGCTTAATAAAACGTGATACT 58.253 37.500 0.00 0.00 0.00 2.12
2300 2690 6.439675 TTGGGGCTTAATAAAACGTGATAC 57.560 37.500 0.00 0.00 0.00 2.24
2301 2691 7.648039 ATTTGGGGCTTAATAAAACGTGATA 57.352 32.000 0.00 0.00 0.00 2.15
2302 2692 5.986501 TTTGGGGCTTAATAAAACGTGAT 57.013 34.783 0.00 0.00 0.00 3.06
2303 2693 5.986501 ATTTGGGGCTTAATAAAACGTGA 57.013 34.783 0.00 0.00 0.00 4.35
2304 2694 6.425417 ACAAATTTGGGGCTTAATAAAACGTG 59.575 34.615 21.74 0.00 0.00 4.49
2305 2695 6.526526 ACAAATTTGGGGCTTAATAAAACGT 58.473 32.000 21.74 0.00 0.00 3.99
2306 2696 6.871492 AGACAAATTTGGGGCTTAATAAAACG 59.129 34.615 21.74 0.00 0.00 3.60
2307 2697 8.615878 AAGACAAATTTGGGGCTTAATAAAAC 57.384 30.769 21.74 0.00 0.00 2.43
2308 2698 9.634021 AAAAGACAAATTTGGGGCTTAATAAAA 57.366 25.926 21.74 0.00 0.00 1.52
2309 2699 9.278978 GAAAAGACAAATTTGGGGCTTAATAAA 57.721 29.630 21.74 0.00 0.00 1.40
2310 2700 8.655901 AGAAAAGACAAATTTGGGGCTTAATAA 58.344 29.630 21.74 0.00 0.00 1.40
2311 2701 8.093927 CAGAAAAGACAAATTTGGGGCTTAATA 58.906 33.333 21.74 0.00 0.00 0.98
2312 2702 6.936335 CAGAAAAGACAAATTTGGGGCTTAAT 59.064 34.615 21.74 13.21 0.00 1.40
2313 2703 6.287525 CAGAAAAGACAAATTTGGGGCTTAA 58.712 36.000 21.74 0.00 0.00 1.85
2314 2704 5.741673 GCAGAAAAGACAAATTTGGGGCTTA 60.742 40.000 21.74 0.00 0.00 3.09
2315 2705 4.707105 CAGAAAAGACAAATTTGGGGCTT 58.293 39.130 21.74 17.22 0.00 4.35
2316 2706 3.494924 GCAGAAAAGACAAATTTGGGGCT 60.495 43.478 21.74 12.73 0.00 5.19
2317 2707 2.807967 GCAGAAAAGACAAATTTGGGGC 59.192 45.455 21.74 10.78 0.00 5.80
2318 2708 3.809279 GTGCAGAAAAGACAAATTTGGGG 59.191 43.478 21.74 0.00 0.00 4.96
2319 2709 4.440880 TGTGCAGAAAAGACAAATTTGGG 58.559 39.130 21.74 0.00 0.00 4.12
2320 2710 5.220643 GGTTGTGCAGAAAAGACAAATTTGG 60.221 40.000 21.74 4.79 31.62 3.28
2321 2711 5.220643 GGGTTGTGCAGAAAAGACAAATTTG 60.221 40.000 16.67 16.67 31.62 2.32
2322 2712 4.875536 GGGTTGTGCAGAAAAGACAAATTT 59.124 37.500 0.00 0.00 31.62 1.82
2323 2713 4.441792 GGGTTGTGCAGAAAAGACAAATT 58.558 39.130 0.00 0.00 31.62 1.82
2324 2714 3.181466 GGGGTTGTGCAGAAAAGACAAAT 60.181 43.478 0.00 0.00 31.62 2.32
2325 2715 2.167487 GGGGTTGTGCAGAAAAGACAAA 59.833 45.455 0.00 0.00 31.62 2.83
2326 2716 1.754226 GGGGTTGTGCAGAAAAGACAA 59.246 47.619 0.00 0.00 0.00 3.18
2327 2717 1.398692 GGGGTTGTGCAGAAAAGACA 58.601 50.000 0.00 0.00 0.00 3.41
2328 2718 0.673985 GGGGGTTGTGCAGAAAAGAC 59.326 55.000 0.00 0.00 0.00 3.01
2329 2719 0.260230 TGGGGGTTGTGCAGAAAAGA 59.740 50.000 0.00 0.00 0.00 2.52
2330 2720 1.341080 ATGGGGGTTGTGCAGAAAAG 58.659 50.000 0.00 0.00 0.00 2.27
2331 2721 1.799933 AATGGGGGTTGTGCAGAAAA 58.200 45.000 0.00 0.00 0.00 2.29
2332 2722 1.691434 GAAATGGGGGTTGTGCAGAAA 59.309 47.619 0.00 0.00 0.00 2.52
2333 2723 1.337118 GAAATGGGGGTTGTGCAGAA 58.663 50.000 0.00 0.00 0.00 3.02
2334 2724 0.187117 TGAAATGGGGGTTGTGCAGA 59.813 50.000 0.00 0.00 0.00 4.26
2335 2725 1.205417 GATGAAATGGGGGTTGTGCAG 59.795 52.381 0.00 0.00 0.00 4.41
2336 2726 1.265236 GATGAAATGGGGGTTGTGCA 58.735 50.000 0.00 0.00 0.00 4.57
2337 2727 0.173255 CGATGAAATGGGGGTTGTGC 59.827 55.000 0.00 0.00 0.00 4.57
2338 2728 1.544724 ACGATGAAATGGGGGTTGTG 58.455 50.000 0.00 0.00 0.00 3.33
2339 2729 3.662759 ATACGATGAAATGGGGGTTGT 57.337 42.857 0.00 0.00 0.00 3.32
2340 2730 4.400884 TGAAATACGATGAAATGGGGGTTG 59.599 41.667 0.00 0.00 0.00 3.77
2341 2731 4.605183 TGAAATACGATGAAATGGGGGTT 58.395 39.130 0.00 0.00 0.00 4.11
2342 2732 4.243793 TGAAATACGATGAAATGGGGGT 57.756 40.909 0.00 0.00 0.00 4.95
2343 2733 5.536161 AGAATGAAATACGATGAAATGGGGG 59.464 40.000 0.00 0.00 0.00 5.40
2344 2734 6.262944 TCAGAATGAAATACGATGAAATGGGG 59.737 38.462 0.00 0.00 45.97 4.96
2345 2735 7.263100 TCAGAATGAAATACGATGAAATGGG 57.737 36.000 0.00 0.00 45.97 4.00
2360 2750 7.484975 ACAACCGTGTAAATTTTCAGAATGAA 58.515 30.769 0.00 0.00 45.32 2.57
2361 2751 7.033530 ACAACCGTGTAAATTTTCAGAATGA 57.966 32.000 0.00 0.00 39.15 2.57
2362 2752 7.858382 TGTACAACCGTGTAAATTTTCAGAATG 59.142 33.333 0.00 0.00 41.89 2.67
2363 2753 7.858879 GTGTACAACCGTGTAAATTTTCAGAAT 59.141 33.333 0.00 0.00 41.89 2.40
2364 2754 7.066043 AGTGTACAACCGTGTAAATTTTCAGAA 59.934 33.333 0.00 0.00 41.89 3.02
2365 2755 6.539464 AGTGTACAACCGTGTAAATTTTCAGA 59.461 34.615 0.00 0.00 41.89 3.27
2366 2756 6.721321 AGTGTACAACCGTGTAAATTTTCAG 58.279 36.000 0.00 0.00 41.89 3.02
2367 2757 6.680874 AGTGTACAACCGTGTAAATTTTCA 57.319 33.333 0.00 0.00 41.89 2.69
2368 2758 7.269724 GCATAGTGTACAACCGTGTAAATTTTC 59.730 37.037 0.00 0.00 41.89 2.29
2369 2759 7.079475 GCATAGTGTACAACCGTGTAAATTTT 58.921 34.615 0.00 0.00 41.89 1.82
2370 2760 6.348704 GGCATAGTGTACAACCGTGTAAATTT 60.349 38.462 0.00 0.00 41.89 1.82
2371 2761 5.122711 GGCATAGTGTACAACCGTGTAAATT 59.877 40.000 0.00 0.00 41.89 1.82
2372 2762 4.632688 GGCATAGTGTACAACCGTGTAAAT 59.367 41.667 0.00 0.00 41.89 1.40
2373 2763 3.995705 GGCATAGTGTACAACCGTGTAAA 59.004 43.478 0.00 0.00 41.89 2.01
2374 2764 3.258872 AGGCATAGTGTACAACCGTGTAA 59.741 43.478 0.00 0.00 41.89 2.41
2375 2765 2.827322 AGGCATAGTGTACAACCGTGTA 59.173 45.455 0.00 0.00 39.30 2.90
2376 2766 1.621814 AGGCATAGTGTACAACCGTGT 59.378 47.619 0.00 0.00 42.09 4.49
2377 2767 2.380084 AGGCATAGTGTACAACCGTG 57.620 50.000 0.00 0.00 0.00 4.94
2378 2768 2.300723 TGAAGGCATAGTGTACAACCGT 59.699 45.455 0.00 0.00 0.00 4.83
2379 2769 2.967362 TGAAGGCATAGTGTACAACCG 58.033 47.619 0.00 0.00 0.00 4.44
2380 2770 4.770795 AGATGAAGGCATAGTGTACAACC 58.229 43.478 0.00 0.00 34.11 3.77
2381 2771 7.437748 AGATAGATGAAGGCATAGTGTACAAC 58.562 38.462 0.00 0.00 34.11 3.32
2382 2772 7.507277 AGAGATAGATGAAGGCATAGTGTACAA 59.493 37.037 0.00 0.00 34.11 2.41
2383 2773 7.007116 AGAGATAGATGAAGGCATAGTGTACA 58.993 38.462 0.00 0.00 34.11 2.90
2384 2774 7.461182 AGAGATAGATGAAGGCATAGTGTAC 57.539 40.000 0.00 0.00 34.11 2.90
2386 2776 9.934784 ATATAGAGATAGATGAAGGCATAGTGT 57.065 33.333 0.00 0.00 34.11 3.55
2450 2840 9.517609 CCAAATGCAAAATTCAAAATTCTTGAA 57.482 25.926 14.13 14.13 41.91 2.69
2451 2841 8.900781 TCCAAATGCAAAATTCAAAATTCTTGA 58.099 25.926 0.00 0.68 0.00 3.02
2452 2842 9.176181 CTCCAAATGCAAAATTCAAAATTCTTG 57.824 29.630 0.00 0.00 0.00 3.02
2453 2843 8.354426 CCTCCAAATGCAAAATTCAAAATTCTT 58.646 29.630 0.00 0.00 0.00 2.52
2454 2844 7.522562 GCCTCCAAATGCAAAATTCAAAATTCT 60.523 33.333 0.00 0.00 0.00 2.40
2455 2845 6.583427 GCCTCCAAATGCAAAATTCAAAATTC 59.417 34.615 0.00 0.00 0.00 2.17
2456 2846 6.448852 GCCTCCAAATGCAAAATTCAAAATT 58.551 32.000 0.00 0.00 0.00 1.82
2457 2847 5.047872 GGCCTCCAAATGCAAAATTCAAAAT 60.048 36.000 0.00 0.00 0.00 1.82
2458 2848 4.277921 GGCCTCCAAATGCAAAATTCAAAA 59.722 37.500 0.00 0.00 0.00 2.44
2459 2849 3.819902 GGCCTCCAAATGCAAAATTCAAA 59.180 39.130 0.00 0.00 0.00 2.69
2460 2850 3.072768 AGGCCTCCAAATGCAAAATTCAA 59.927 39.130 0.00 0.00 0.00 2.69
2461 2851 2.638855 AGGCCTCCAAATGCAAAATTCA 59.361 40.909 0.00 0.00 0.00 2.57
2462 2852 3.264947 GAGGCCTCCAAATGCAAAATTC 58.735 45.455 23.19 0.00 0.00 2.17
2463 2853 3.339253 GAGGCCTCCAAATGCAAAATT 57.661 42.857 23.19 0.00 0.00 1.82
2476 2866 2.354103 GGAAATTGCTTTTGGAGGCCTC 60.354 50.000 25.59 25.59 0.00 4.70
2477 2867 1.625315 GGAAATTGCTTTTGGAGGCCT 59.375 47.619 3.86 3.86 0.00 5.19
2478 2868 1.347378 TGGAAATTGCTTTTGGAGGCC 59.653 47.619 0.00 0.00 0.00 5.19
2479 2869 2.837532 TGGAAATTGCTTTTGGAGGC 57.162 45.000 0.00 0.00 0.00 4.70
2480 2870 4.605640 TCTTGGAAATTGCTTTTGGAGG 57.394 40.909 0.00 0.00 0.00 4.30
2481 2871 7.656948 TGTAATTCTTGGAAATTGCTTTTGGAG 59.343 33.333 0.00 0.00 33.82 3.86
2482 2872 7.504403 TGTAATTCTTGGAAATTGCTTTTGGA 58.496 30.769 0.00 0.00 33.82 3.53
2483 2873 7.656948 TCTGTAATTCTTGGAAATTGCTTTTGG 59.343 33.333 0.00 0.00 33.82 3.28
2484 2874 8.592105 TCTGTAATTCTTGGAAATTGCTTTTG 57.408 30.769 0.00 0.00 33.82 2.44
2485 2875 9.211485 CATCTGTAATTCTTGGAAATTGCTTTT 57.789 29.630 0.00 0.00 33.82 2.27
2486 2876 7.820872 CCATCTGTAATTCTTGGAAATTGCTTT 59.179 33.333 0.00 0.00 33.82 3.51
2487 2877 7.038799 ACCATCTGTAATTCTTGGAAATTGCTT 60.039 33.333 0.00 0.00 33.82 3.91
2488 2878 6.438425 ACCATCTGTAATTCTTGGAAATTGCT 59.562 34.615 0.00 0.00 33.82 3.91
2489 2879 6.633856 ACCATCTGTAATTCTTGGAAATTGC 58.366 36.000 0.00 0.00 33.44 3.56
2496 2886 9.423061 CCTTTTTAAACCATCTGTAATTCTTGG 57.577 33.333 0.00 0.00 0.00 3.61
2499 2889 9.362151 TGTCCTTTTTAAACCATCTGTAATTCT 57.638 29.630 0.00 0.00 0.00 2.40
2500 2890 9.974980 TTGTCCTTTTTAAACCATCTGTAATTC 57.025 29.630 0.00 0.00 0.00 2.17
2502 2892 9.927668 CATTGTCCTTTTTAAACCATCTGTAAT 57.072 29.630 0.00 0.00 0.00 1.89
2503 2893 8.364142 CCATTGTCCTTTTTAAACCATCTGTAA 58.636 33.333 0.00 0.00 0.00 2.41
2504 2894 7.039363 CCCATTGTCCTTTTTAAACCATCTGTA 60.039 37.037 0.00 0.00 0.00 2.74
2505 2895 6.239572 CCCATTGTCCTTTTTAAACCATCTGT 60.240 38.462 0.00 0.00 0.00 3.41
2523 2913 4.019174 CAAGAAGCCACTATTCCCATTGT 58.981 43.478 0.00 0.00 0.00 2.71
2540 2930 8.687242 CATGGAGTACTACTGATAGAACAAGAA 58.313 37.037 6.66 0.00 32.23 2.52
2550 2940 5.537300 ATTTCGCATGGAGTACTACTGAT 57.463 39.130 6.66 0.00 0.00 2.90
2584 2974 1.295792 TGTGGTTCAAGAACTGACGC 58.704 50.000 12.22 4.14 40.94 5.19
2604 2994 4.665833 TGCACTAACAGTAACAGACAGT 57.334 40.909 0.00 0.00 0.00 3.55
2606 2996 3.807622 GCTTGCACTAACAGTAACAGACA 59.192 43.478 0.00 0.00 0.00 3.41
2608 2998 3.071023 AGGCTTGCACTAACAGTAACAGA 59.929 43.478 0.00 0.00 0.00 3.41
2624 3014 3.411446 TGTTGATGGTAAGTGAGGCTTG 58.589 45.455 0.00 0.00 38.05 4.01
2631 3021 6.021596 GCTTACGATTTGTTGATGGTAAGTG 58.978 40.000 15.97 0.87 43.94 3.16
2634 3024 6.561737 TTGCTTACGATTTGTTGATGGTAA 57.438 33.333 0.00 0.00 31.98 2.85
2635 3025 6.561737 TTTGCTTACGATTTGTTGATGGTA 57.438 33.333 0.00 0.00 0.00 3.25
2636 3026 5.446143 TTTGCTTACGATTTGTTGATGGT 57.554 34.783 0.00 0.00 0.00 3.55
2638 3028 9.726034 GTTATTTTTGCTTACGATTTGTTGATG 57.274 29.630 0.00 0.00 0.00 3.07
2640 3030 8.963130 CAGTTATTTTTGCTTACGATTTGTTGA 58.037 29.630 0.00 0.00 0.00 3.18
2641 3031 8.213812 CCAGTTATTTTTGCTTACGATTTGTTG 58.786 33.333 0.00 0.00 0.00 3.33
2645 3035 6.866248 CCACCAGTTATTTTTGCTTACGATTT 59.134 34.615 0.00 0.00 0.00 2.17
2646 3036 6.386654 CCACCAGTTATTTTTGCTTACGATT 58.613 36.000 0.00 0.00 0.00 3.34
2648 3038 4.320641 GCCACCAGTTATTTTTGCTTACGA 60.321 41.667 0.00 0.00 0.00 3.43
2649 3039 3.917985 GCCACCAGTTATTTTTGCTTACG 59.082 43.478 0.00 0.00 0.00 3.18
2650 3040 3.917985 CGCCACCAGTTATTTTTGCTTAC 59.082 43.478 0.00 0.00 0.00 2.34
2655 3045 2.430546 TGCGCCACCAGTTATTTTTG 57.569 45.000 4.18 0.00 0.00 2.44
2660 3050 0.732571 CGAAATGCGCCACCAGTTAT 59.267 50.000 4.18 0.00 0.00 1.89
2675 3065 8.560355 TCAAATGGATTCTTGAACTATCGAAA 57.440 30.769 0.00 0.00 0.00 3.46
2689 3079 5.828299 TCCGTTGGTATTCAAATGGATTC 57.172 39.130 0.00 0.00 37.29 2.52
2706 3096 9.265901 CTCTATCAATTGAGTTTCATATCCGTT 57.734 33.333 14.54 0.00 0.00 4.44
2803 3193 7.168219 TGTGCTCTCTGTTATGGTTTTATTCT 58.832 34.615 0.00 0.00 0.00 2.40
2816 3206 4.070716 CCTTTTCAGATGTGCTCTCTGTT 58.929 43.478 12.05 0.00 40.79 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.