Multiple sequence alignment - TraesCS4B01G250900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G250900 chr4B 100.000 3941 0 0 1 3941 517263623 517267563 0.000000e+00 7278
1 TraesCS4B01G250900 chr4B 97.931 290 5 1 3653 3941 240113798 240113509 5.880000e-138 501
2 TraesCS4B01G250900 chr4A 91.165 3158 172 61 557 3660 45342000 45338896 0.000000e+00 4187
3 TraesCS4B01G250900 chr4A 87.907 215 14 6 204 418 45342352 45342150 3.930000e-60 243
4 TraesCS4B01G250900 chr4D 94.506 2239 101 13 1431 3657 419310145 419312373 0.000000e+00 3434
5 TraesCS4B01G250900 chr4D 85.396 897 80 29 516 1394 419307138 419308001 0.000000e+00 883
6 TraesCS4B01G250900 chr4D 92.192 333 13 5 191 516 419306653 419306979 3.590000e-125 459
7 TraesCS4B01G250900 chr6B 98.951 286 3 0 3656 3941 52851764 52852049 2.720000e-141 512
8 TraesCS4B01G250900 chr6B 98.587 283 4 0 3659 3941 366797181 366796899 5.880000e-138 501
9 TraesCS4B01G250900 chr6B 98.246 285 5 0 3657 3941 476402481 476402197 2.110000e-137 499
10 TraesCS4B01G250900 chr5A 98.940 283 3 0 3659 3941 635183895 635183613 1.260000e-139 507
11 TraesCS4B01G250900 chr5A 98.270 289 4 1 3654 3941 239925419 239925707 4.540000e-139 505
12 TraesCS4B01G250900 chr5A 98.596 285 4 0 3657 3941 685606902 685606618 4.540000e-139 505
13 TraesCS4B01G250900 chr7B 98.596 285 4 0 3657 3941 681655986 681655702 4.540000e-139 505
14 TraesCS4B01G250900 chr3B 98.596 285 4 0 3657 3941 661564822 661564538 4.540000e-139 505
15 TraesCS4B01G250900 chr2A 91.346 104 6 3 94 196 681093499 681093398 5.310000e-29 139
16 TraesCS4B01G250900 chr7A 91.176 102 7 2 95 195 457749421 457749321 1.910000e-28 137
17 TraesCS4B01G250900 chr1D 91.919 99 6 2 95 192 313200908 313201005 1.910000e-28 137
18 TraesCS4B01G250900 chr3D 89.091 110 10 2 95 203 22331349 22331241 6.870000e-28 135
19 TraesCS4B01G250900 chr1B 91.837 98 7 1 95 192 301472075 301472171 6.870000e-28 135
20 TraesCS4B01G250900 chr1B 91.000 100 6 3 95 193 301472171 301472074 8.890000e-27 132
21 TraesCS4B01G250900 chr3A 90.291 103 9 1 95 197 572598542 572598441 2.470000e-27 134
22 TraesCS4B01G250900 chr5D 89.623 106 8 3 93 197 428235610 428235507 8.890000e-27 132
23 TraesCS4B01G250900 chr2D 87.500 112 12 2 95 206 593274339 593274230 1.150000e-25 128


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G250900 chr4B 517263623 517267563 3940 False 7278 7278 100.000 1 3941 1 chr4B.!!$F1 3940
1 TraesCS4B01G250900 chr4A 45338896 45342352 3456 True 2215 4187 89.536 204 3660 2 chr4A.!!$R1 3456
2 TraesCS4B01G250900 chr4D 419306653 419312373 5720 False 1592 3434 90.698 191 3657 3 chr4D.!!$F1 3466

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
536 703 0.037326 GAACGGATCCAGCACTCACA 60.037 55.0 13.41 0.0 0.0 3.58 F
873 1090 0.178961 AACAGTTTCCTTGCCCCTCC 60.179 55.0 0.00 0.0 0.0 4.30 F
1017 1244 0.313672 GCATGGACGGCAACTTGAAA 59.686 50.0 0.00 0.0 0.0 2.69 F
1934 4310 0.616111 AAGATGCTGACGAGGGACCT 60.616 55.0 0.00 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2014 4391 0.026803 GGCTGAAACGATGATGCGAC 59.973 55.000 0.0 0.0 34.83 5.19 R
2460 4837 0.755698 TCTCCCACTCGGCTATGGTC 60.756 60.000 0.0 0.0 33.80 4.02 R
2755 5133 1.603172 CGCTCTCTTTCTGTCCAACGT 60.603 52.381 0.0 0.0 0.00 3.99 R
3892 6285 0.322816 GCCATCAGTTGCTTCCTGGA 60.323 55.000 0.0 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 6.844696 TTGTCATACAACAAACAGAGAGAC 57.155 37.500 0.00 0.00 36.25 3.36
31 32 6.161855 TGTCATACAACAAACAGAGAGACT 57.838 37.500 0.00 0.00 0.00 3.24
32 33 6.216569 TGTCATACAACAAACAGAGAGACTC 58.783 40.000 0.00 0.00 0.00 3.36
33 34 6.183360 TGTCATACAACAAACAGAGAGACTCA 60.183 38.462 5.02 0.00 32.06 3.41
34 35 6.701841 GTCATACAACAAACAGAGAGACTCAA 59.298 38.462 5.02 0.00 32.06 3.02
35 36 6.701841 TCATACAACAAACAGAGAGACTCAAC 59.298 38.462 5.02 0.00 32.06 3.18
36 37 4.192317 ACAACAAACAGAGAGACTCAACC 58.808 43.478 5.02 0.00 32.06 3.77
37 38 4.191544 CAACAAACAGAGAGACTCAACCA 58.808 43.478 5.02 0.00 32.06 3.67
38 39 3.798202 ACAAACAGAGAGACTCAACCAC 58.202 45.455 5.02 0.00 32.06 4.16
39 40 3.197766 ACAAACAGAGAGACTCAACCACA 59.802 43.478 5.02 0.00 32.06 4.17
40 41 4.141620 ACAAACAGAGAGACTCAACCACAT 60.142 41.667 5.02 0.00 32.06 3.21
41 42 3.674528 ACAGAGAGACTCAACCACATG 57.325 47.619 5.02 0.00 32.06 3.21
42 43 3.234353 ACAGAGAGACTCAACCACATGA 58.766 45.455 5.02 0.00 32.06 3.07
43 44 3.643320 ACAGAGAGACTCAACCACATGAA 59.357 43.478 5.02 0.00 32.06 2.57
44 45 3.993081 CAGAGAGACTCAACCACATGAAC 59.007 47.826 5.02 0.00 32.06 3.18
45 46 3.900601 AGAGAGACTCAACCACATGAACT 59.099 43.478 5.02 0.00 32.06 3.01
46 47 5.047731 CAGAGAGACTCAACCACATGAACTA 60.048 44.000 5.02 0.00 32.06 2.24
47 48 5.184864 AGAGAGACTCAACCACATGAACTAG 59.815 44.000 5.02 0.00 32.06 2.57
48 49 4.835615 AGAGACTCAACCACATGAACTAGT 59.164 41.667 5.02 0.00 0.00 2.57
49 50 4.887748 AGACTCAACCACATGAACTAGTG 58.112 43.478 0.00 0.00 35.56 2.74
50 51 3.403038 ACTCAACCACATGAACTAGTGC 58.597 45.455 0.00 0.00 34.48 4.40
51 52 2.744202 CTCAACCACATGAACTAGTGCC 59.256 50.000 0.00 0.00 34.48 5.01
52 53 2.105649 TCAACCACATGAACTAGTGCCA 59.894 45.455 0.00 0.00 34.48 4.92
53 54 2.884012 CAACCACATGAACTAGTGCCAA 59.116 45.455 0.00 0.00 34.48 4.52
54 55 3.222173 ACCACATGAACTAGTGCCAAA 57.778 42.857 0.00 0.00 34.48 3.28
55 56 3.561143 ACCACATGAACTAGTGCCAAAA 58.439 40.909 0.00 0.00 34.48 2.44
56 57 3.957497 ACCACATGAACTAGTGCCAAAAA 59.043 39.130 0.00 0.00 34.48 1.94
57 58 4.202111 ACCACATGAACTAGTGCCAAAAAC 60.202 41.667 0.00 0.00 34.48 2.43
58 59 4.298332 CACATGAACTAGTGCCAAAAACC 58.702 43.478 0.00 0.00 0.00 3.27
59 60 4.037923 CACATGAACTAGTGCCAAAAACCT 59.962 41.667 0.00 0.00 0.00 3.50
60 61 4.278419 ACATGAACTAGTGCCAAAAACCTC 59.722 41.667 0.00 0.00 0.00 3.85
61 62 2.875933 TGAACTAGTGCCAAAAACCTCG 59.124 45.455 0.00 0.00 0.00 4.63
62 63 1.235724 ACTAGTGCCAAAAACCTCGC 58.764 50.000 0.00 0.00 0.00 5.03
63 64 0.165944 CTAGTGCCAAAAACCTCGCG 59.834 55.000 0.00 0.00 0.00 5.87
64 65 1.231958 TAGTGCCAAAAACCTCGCGG 61.232 55.000 6.13 0.00 0.00 6.46
65 66 3.972276 TGCCAAAAACCTCGCGGC 61.972 61.111 6.13 0.00 43.28 6.53
66 67 3.670377 GCCAAAAACCTCGCGGCT 61.670 61.111 6.13 0.00 39.73 5.52
67 68 2.329614 GCCAAAAACCTCGCGGCTA 61.330 57.895 6.13 0.00 39.73 3.93
68 69 1.794222 CCAAAAACCTCGCGGCTAG 59.206 57.895 6.13 0.00 0.00 3.42
69 70 0.953960 CCAAAAACCTCGCGGCTAGT 60.954 55.000 6.13 0.00 0.00 2.57
70 71 0.165944 CAAAAACCTCGCGGCTAGTG 59.834 55.000 6.13 0.00 0.00 2.74
71 72 0.250166 AAAAACCTCGCGGCTAGTGT 60.250 50.000 6.13 0.00 0.00 3.55
72 73 0.604578 AAAACCTCGCGGCTAGTGTA 59.395 50.000 6.13 0.00 0.00 2.90
73 74 0.822164 AAACCTCGCGGCTAGTGTAT 59.178 50.000 6.13 0.00 0.00 2.29
74 75 1.683943 AACCTCGCGGCTAGTGTATA 58.316 50.000 6.13 0.00 0.00 1.47
75 76 1.683943 ACCTCGCGGCTAGTGTATAA 58.316 50.000 6.13 0.00 0.00 0.98
76 77 2.236766 ACCTCGCGGCTAGTGTATAAT 58.763 47.619 6.13 0.00 0.00 1.28
77 78 2.030185 ACCTCGCGGCTAGTGTATAATG 60.030 50.000 6.13 0.00 0.00 1.90
78 79 2.228103 CCTCGCGGCTAGTGTATAATGA 59.772 50.000 6.13 0.00 0.00 2.57
79 80 3.493272 CTCGCGGCTAGTGTATAATGAG 58.507 50.000 6.13 0.00 0.00 2.90
80 81 1.986378 CGCGGCTAGTGTATAATGAGC 59.014 52.381 0.00 0.00 0.00 4.26
81 82 2.351835 CGCGGCTAGTGTATAATGAGCT 60.352 50.000 0.00 0.00 33.57 4.09
82 83 3.119955 CGCGGCTAGTGTATAATGAGCTA 60.120 47.826 0.00 0.00 33.57 3.32
83 84 4.615223 CGCGGCTAGTGTATAATGAGCTAA 60.615 45.833 0.00 0.00 33.57 3.09
84 85 5.411781 GCGGCTAGTGTATAATGAGCTAAT 58.588 41.667 0.00 0.00 33.57 1.73
85 86 6.561614 GCGGCTAGTGTATAATGAGCTAATA 58.438 40.000 0.00 0.00 33.57 0.98
86 87 7.203910 GCGGCTAGTGTATAATGAGCTAATAT 58.796 38.462 0.00 0.00 33.57 1.28
87 88 7.380065 GCGGCTAGTGTATAATGAGCTAATATC 59.620 40.741 0.00 0.00 33.57 1.63
88 89 8.406297 CGGCTAGTGTATAATGAGCTAATATCA 58.594 37.037 0.00 0.00 33.57 2.15
99 100 7.896383 ATGAGCTAATATCATCTCCTACTCC 57.104 40.000 0.00 0.00 31.76 3.85
100 101 6.191315 TGAGCTAATATCATCTCCTACTCCC 58.809 44.000 0.00 0.00 0.00 4.30
101 102 6.011185 TGAGCTAATATCATCTCCTACTCCCT 60.011 42.308 0.00 0.00 0.00 4.20
102 103 6.431722 AGCTAATATCATCTCCTACTCCCTC 58.568 44.000 0.00 0.00 0.00 4.30
103 104 5.596772 GCTAATATCATCTCCTACTCCCTCC 59.403 48.000 0.00 0.00 0.00 4.30
104 105 5.623551 AATATCATCTCCTACTCCCTCCA 57.376 43.478 0.00 0.00 0.00 3.86
105 106 5.829858 ATATCATCTCCTACTCCCTCCAT 57.170 43.478 0.00 0.00 0.00 3.41
106 107 4.500389 ATCATCTCCTACTCCCTCCATT 57.500 45.455 0.00 0.00 0.00 3.16
107 108 3.850752 TCATCTCCTACTCCCTCCATTC 58.149 50.000 0.00 0.00 0.00 2.67
108 109 2.777459 TCTCCTACTCCCTCCATTCC 57.223 55.000 0.00 0.00 0.00 3.01
109 110 1.133450 TCTCCTACTCCCTCCATTCCG 60.133 57.143 0.00 0.00 0.00 4.30
110 111 0.931468 TCCTACTCCCTCCATTCCGA 59.069 55.000 0.00 0.00 0.00 4.55
111 112 1.289830 TCCTACTCCCTCCATTCCGAA 59.710 52.381 0.00 0.00 0.00 4.30
112 113 2.116238 CCTACTCCCTCCATTCCGAAA 58.884 52.381 0.00 0.00 0.00 3.46
113 114 2.706190 CCTACTCCCTCCATTCCGAAAT 59.294 50.000 0.00 0.00 0.00 2.17
114 115 3.901844 CCTACTCCCTCCATTCCGAAATA 59.098 47.826 0.00 0.00 0.00 1.40
115 116 4.021016 CCTACTCCCTCCATTCCGAAATAG 60.021 50.000 0.00 0.00 0.00 1.73
116 117 3.654273 ACTCCCTCCATTCCGAAATAGA 58.346 45.455 0.00 0.00 0.00 1.98
117 118 4.235372 ACTCCCTCCATTCCGAAATAGAT 58.765 43.478 0.00 0.00 0.00 1.98
118 119 4.040952 ACTCCCTCCATTCCGAAATAGATG 59.959 45.833 0.00 0.00 0.00 2.90
119 120 4.231273 TCCCTCCATTCCGAAATAGATGA 58.769 43.478 0.00 0.00 0.00 2.92
120 121 4.040461 TCCCTCCATTCCGAAATAGATGAC 59.960 45.833 0.00 0.00 0.00 3.06
121 122 4.319177 CCTCCATTCCGAAATAGATGACC 58.681 47.826 0.00 0.00 0.00 4.02
122 123 4.319177 CTCCATTCCGAAATAGATGACCC 58.681 47.826 0.00 0.00 0.00 4.46
123 124 3.714280 TCCATTCCGAAATAGATGACCCA 59.286 43.478 0.00 0.00 0.00 4.51
124 125 4.165180 TCCATTCCGAAATAGATGACCCAA 59.835 41.667 0.00 0.00 0.00 4.12
125 126 4.275936 CCATTCCGAAATAGATGACCCAAC 59.724 45.833 0.00 0.00 0.00 3.77
126 127 4.837093 TTCCGAAATAGATGACCCAACT 57.163 40.909 0.00 0.00 0.00 3.16
127 128 4.837093 TCCGAAATAGATGACCCAACTT 57.163 40.909 0.00 0.00 0.00 2.66
128 129 5.174037 TCCGAAATAGATGACCCAACTTT 57.826 39.130 0.00 0.00 0.00 2.66
129 130 6.302535 TCCGAAATAGATGACCCAACTTTA 57.697 37.500 0.00 0.00 0.00 1.85
130 131 6.895782 TCCGAAATAGATGACCCAACTTTAT 58.104 36.000 0.00 0.00 0.00 1.40
131 132 8.025270 TCCGAAATAGATGACCCAACTTTATA 57.975 34.615 0.00 0.00 0.00 0.98
132 133 7.929785 TCCGAAATAGATGACCCAACTTTATAC 59.070 37.037 0.00 0.00 0.00 1.47
133 134 7.931948 CCGAAATAGATGACCCAACTTTATACT 59.068 37.037 0.00 0.00 0.00 2.12
134 135 9.976511 CGAAATAGATGACCCAACTTTATACTA 57.023 33.333 0.00 0.00 0.00 1.82
181 182 9.719355 ATAAAGTTGGGTCATTTATTTTGGAAC 57.281 29.630 0.00 0.00 0.00 3.62
182 183 6.739331 AGTTGGGTCATTTATTTTGGAACA 57.261 33.333 0.00 0.00 0.00 3.18
229 237 9.981114 AAAAAGTAAAAATATCACAGGGACTTG 57.019 29.630 0.00 0.00 34.60 3.16
244 252 4.017499 AGGGACTTGCAAGGGTACATTAAT 60.017 41.667 29.18 4.98 27.25 1.40
249 257 5.772672 ACTTGCAAGGGTACATTAATTGTCA 59.227 36.000 29.18 0.00 39.87 3.58
252 260 5.714333 TGCAAGGGTACATTAATTGTCATGT 59.286 36.000 0.00 5.41 39.87 3.21
265 273 3.878086 TGTCATGTCTTGTCGCTTTTC 57.122 42.857 0.00 0.00 0.00 2.29
286 294 5.486735 TCCTTTTGGTCTATTGGTCGTAA 57.513 39.130 0.00 0.00 41.38 3.18
347 355 4.331968 TCTGCATTTTGTAACCTGGTAGG 58.668 43.478 0.00 0.00 42.49 3.18
448 456 7.106239 TCATCAACTTTTCCCTTTCTAGCTAG 58.894 38.462 15.01 15.01 0.00 3.42
457 465 4.090819 CCCTTTCTAGCTAGTAGGATCCC 58.909 52.174 30.05 0.00 32.05 3.85
462 470 4.510312 TCTAGCTAGTAGGATCCCACCTA 58.490 47.826 20.10 5.35 41.00 3.08
471 479 2.311688 GATCCCACCTACCGCACCAG 62.312 65.000 0.00 0.00 0.00 4.00
536 703 0.037326 GAACGGATCCAGCACTCACA 60.037 55.000 13.41 0.00 0.00 3.58
547 714 5.483811 TCCAGCACTCACAATATAAAACGA 58.516 37.500 0.00 0.00 0.00 3.85
659 876 3.738282 GGTAATGCACGAGAAGATGCTAG 59.262 47.826 0.00 0.00 42.55 3.42
660 877 3.533606 AATGCACGAGAAGATGCTAGT 57.466 42.857 0.00 0.00 42.55 2.57
661 878 4.655762 AATGCACGAGAAGATGCTAGTA 57.344 40.909 0.00 0.00 42.55 1.82
681 898 7.645735 GCTAGTAATTTGCATTAAGGAAAGCTC 59.354 37.037 0.00 0.00 41.02 4.09
812 1029 3.949754 TGAAGCTAAAGCAATCCCATCTG 59.050 43.478 4.54 0.00 45.16 2.90
870 1087 0.673985 GACAACAGTTTCCTTGCCCC 59.326 55.000 0.00 0.00 0.00 5.80
873 1090 0.178961 AACAGTTTCCTTGCCCCTCC 60.179 55.000 0.00 0.00 0.00 4.30
876 1093 0.476611 AGTTTCCTTGCCCCTCCTCT 60.477 55.000 0.00 0.00 0.00 3.69
877 1094 0.322906 GTTTCCTTGCCCCTCCTCTG 60.323 60.000 0.00 0.00 0.00 3.35
878 1095 0.772124 TTTCCTTGCCCCTCCTCTGT 60.772 55.000 0.00 0.00 0.00 3.41
890 1107 1.231751 TCCTCTGTCCATCTCCCCCT 61.232 60.000 0.00 0.00 0.00 4.79
931 1158 5.016173 TCCAAATACAAGCAAGCCATAGTT 58.984 37.500 0.00 0.00 0.00 2.24
932 1159 6.184068 TCCAAATACAAGCAAGCCATAGTTA 58.816 36.000 0.00 0.00 0.00 2.24
933 1160 6.661377 TCCAAATACAAGCAAGCCATAGTTAA 59.339 34.615 0.00 0.00 0.00 2.01
934 1161 7.177568 TCCAAATACAAGCAAGCCATAGTTAAA 59.822 33.333 0.00 0.00 0.00 1.52
998 1225 2.863740 TCTCTACAAATACATTGCGCGG 59.136 45.455 8.83 0.00 43.13 6.46
1017 1244 0.313672 GCATGGACGGCAACTTGAAA 59.686 50.000 0.00 0.00 0.00 2.69
1055 1282 3.237741 GGCATCTAGAGCCGGGCT 61.238 66.667 24.13 24.13 43.15 5.19
1113 1364 7.448161 TCTTCTCCATGCTTAAGTTTGATTTCA 59.552 33.333 4.02 0.00 0.00 2.69
1121 1372 6.092670 TGCTTAAGTTTGATTTCATCTCGGAG 59.907 38.462 4.02 0.00 0.00 4.63
1140 1391 5.022021 CGGAGCGATGAGTTTTATGTTTTC 58.978 41.667 0.00 0.00 0.00 2.29
1141 1392 5.163854 CGGAGCGATGAGTTTTATGTTTTCT 60.164 40.000 0.00 0.00 0.00 2.52
1142 1393 6.024049 GGAGCGATGAGTTTTATGTTTTCTG 58.976 40.000 0.00 0.00 0.00 3.02
1143 1394 5.393962 AGCGATGAGTTTTATGTTTTCTGC 58.606 37.500 0.00 0.00 0.00 4.26
1144 1395 5.182001 AGCGATGAGTTTTATGTTTTCTGCT 59.818 36.000 0.00 0.00 0.00 4.24
1147 1398 6.524586 CGATGAGTTTTATGTTTTCTGCTTCC 59.475 38.462 0.00 0.00 0.00 3.46
1148 1399 6.707440 TGAGTTTTATGTTTTCTGCTTCCA 57.293 33.333 0.00 0.00 0.00 3.53
1184 1435 9.537192 TTTATGTTCTTCTTGTCTTCGTCTTTA 57.463 29.630 0.00 0.00 0.00 1.85
1185 1436 9.706691 TTATGTTCTTCTTGTCTTCGTCTTTAT 57.293 29.630 0.00 0.00 0.00 1.40
1212 1464 3.938334 GCTTCAAAGTTTTCCAAGCCAAA 59.062 39.130 10.65 0.00 34.59 3.28
1214 1466 5.106357 GCTTCAAAGTTTTCCAAGCCAAAAA 60.106 36.000 10.65 0.00 34.59 1.94
1215 1467 6.404623 GCTTCAAAGTTTTCCAAGCCAAAAAT 60.405 34.615 10.65 0.00 34.59 1.82
1216 1468 7.201688 GCTTCAAAGTTTTCCAAGCCAAAAATA 60.202 33.333 10.65 0.00 34.59 1.40
1217 1469 8.567285 TTCAAAGTTTTCCAAGCCAAAAATAA 57.433 26.923 0.00 0.00 0.00 1.40
1218 1470 8.567285 TCAAAGTTTTCCAAGCCAAAAATAAA 57.433 26.923 0.00 0.00 0.00 1.40
1219 1471 9.183368 TCAAAGTTTTCCAAGCCAAAAATAAAT 57.817 25.926 0.00 0.00 0.00 1.40
1244 1496 7.914427 AAAAGTTGATCCTTCCCTTTTAGTT 57.086 32.000 0.00 0.00 33.63 2.24
1247 1499 8.637196 AAGTTGATCCTTCCCTTTTAGTTTAG 57.363 34.615 0.00 0.00 0.00 1.85
1275 1531 7.150783 ACTTGTTCTTAGATCATCCTTTTGC 57.849 36.000 0.00 0.00 0.00 3.68
1297 1553 4.714632 CAGGGTTCAGTTTTCTGGAGTAA 58.285 43.478 0.00 0.00 46.94 2.24
1299 1555 5.008712 CAGGGTTCAGTTTTCTGGAGTAAAC 59.991 44.000 1.72 1.72 46.94 2.01
1305 1561 6.055588 TCAGTTTTCTGGAGTAAACAAGAGG 58.944 40.000 10.40 0.00 46.94 3.69
1317 1573 1.222567 ACAAGAGGGACAAAGGTGGT 58.777 50.000 0.00 0.00 0.00 4.16
1318 1574 2.414612 ACAAGAGGGACAAAGGTGGTA 58.585 47.619 0.00 0.00 0.00 3.25
1325 1581 1.982958 GGACAAAGGTGGTAGGGAAGA 59.017 52.381 0.00 0.00 0.00 2.87
1329 1585 3.655777 ACAAAGGTGGTAGGGAAGATTCA 59.344 43.478 0.00 0.00 0.00 2.57
1331 1587 5.222337 ACAAAGGTGGTAGGGAAGATTCAAT 60.222 40.000 0.00 0.00 0.00 2.57
1353 1609 7.446931 TCAATAATACTGCCACAAGAAAACTCA 59.553 33.333 0.00 0.00 0.00 3.41
1358 1614 2.225467 GCCACAAGAAAACTCAGCTCT 58.775 47.619 0.00 0.00 0.00 4.09
1378 1634 5.982356 CTCTTGGAAGAGGTATGTGATCAA 58.018 41.667 8.33 0.00 46.88 2.57
1381 1637 6.213397 TCTTGGAAGAGGTATGTGATCAAGAA 59.787 38.462 0.00 0.00 36.29 2.52
1405 3771 9.677567 GAATTGCTCTTTCAGTTTACAAACATA 57.322 29.630 7.53 0.00 41.30 2.29
1408 3774 8.896320 TGCTCTTTCAGTTTACAAACATAGTA 57.104 30.769 7.53 0.00 41.30 1.82
1415 3781 7.857569 TCAGTTTACAAACATAGTACAACTGC 58.142 34.615 7.53 0.00 41.30 4.40
1473 3846 5.995446 AGATTTCAGTTAGATTCCTGTCCC 58.005 41.667 0.00 0.00 0.00 4.46
1474 3847 3.887621 TTCAGTTAGATTCCTGTCCCG 57.112 47.619 0.00 0.00 0.00 5.14
1476 3849 2.758979 TCAGTTAGATTCCTGTCCCGTC 59.241 50.000 0.00 0.00 0.00 4.79
1517 3890 9.733556 TCAGTTAATCCACACTGTAAAACATAT 57.266 29.630 0.00 0.00 41.16 1.78
1823 4199 4.372999 AAGCAGAAGGCCAGCCCC 62.373 66.667 5.01 0.00 46.50 5.80
1934 4310 0.616111 AAGATGCTGACGAGGGACCT 60.616 55.000 0.00 0.00 0.00 3.85
1939 4315 1.946475 GCTGACGAGGGACCTGGTAC 61.946 65.000 5.98 0.00 35.19 3.34
1983 4360 4.932200 CACAATCCCTTGTCACTTCTACTC 59.068 45.833 0.00 0.00 43.76 2.59
1990 4367 7.411808 TCCCTTGTCACTTCTACTCTACTAAT 58.588 38.462 0.00 0.00 0.00 1.73
1991 4368 8.554870 TCCCTTGTCACTTCTACTCTACTAATA 58.445 37.037 0.00 0.00 0.00 0.98
1992 4369 9.186837 CCCTTGTCACTTCTACTCTACTAATAA 57.813 37.037 0.00 0.00 0.00 1.40
2014 4391 9.567848 AATAAAACCTCTTATAACAATGTTGCG 57.432 29.630 9.15 0.00 0.00 4.85
2021 4398 2.519002 TAACAATGTTGCGTCGCATC 57.481 45.000 22.41 20.50 38.76 3.91
2036 4413 1.064505 CGCATCATCGTTTCAGCCAAT 59.935 47.619 0.00 0.00 0.00 3.16
2069 4446 1.452145 GGCCGCTGAAACCAGAACAA 61.452 55.000 0.00 0.00 33.56 2.83
2116 4493 1.607467 AGAAGGTGCCATTGCCACC 60.607 57.895 8.74 8.74 38.30 4.61
2147 4524 2.885135 TGCATGATTCTTCTGTGGGT 57.115 45.000 0.00 0.00 0.00 4.51
2186 4563 3.703001 TCCTCCAGAAAATCACCAGAC 57.297 47.619 0.00 0.00 0.00 3.51
2234 4611 1.673665 GCAGGCAGTTCAGAGGGTG 60.674 63.158 0.00 0.00 0.00 4.61
2238 4615 1.001641 GCAGTTCAGAGGGTGCCAT 60.002 57.895 0.00 0.00 0.00 4.40
2445 4822 4.964593 ACATAACCGCCGAATTTAGGTAT 58.035 39.130 0.00 0.00 35.68 2.73
2558 4935 9.546428 TGATTCGAAAGCATAATTTGATAGAGA 57.454 29.630 0.00 0.00 0.00 3.10
2578 4955 4.396522 AGAAGAGCAGCATGTTTCTCTTT 58.603 39.130 21.46 11.40 41.18 2.52
2579 4956 4.455190 AGAAGAGCAGCATGTTTCTCTTTC 59.545 41.667 21.46 15.38 41.18 2.62
2618 4995 5.177327 GGGCACTGTGTTTTTCATTGTTATG 59.823 40.000 9.86 0.00 0.00 1.90
2642 5019 9.927668 ATGATTAATTATTTTATTTGCGAGGGG 57.072 29.630 0.00 0.00 0.00 4.79
2644 5021 9.626045 GATTAATTATTTTATTTGCGAGGGGAG 57.374 33.333 0.00 0.00 0.00 4.30
2646 5023 7.839680 AATTATTTTATTTGCGAGGGGAGAT 57.160 32.000 0.00 0.00 0.00 2.75
2650 5027 1.999634 ATTTGCGAGGGGAGATGGGG 62.000 60.000 0.00 0.00 0.00 4.96
2651 5028 3.943137 TTGCGAGGGGAGATGGGGT 62.943 63.158 0.00 0.00 0.00 4.95
2652 5029 2.122989 GCGAGGGGAGATGGGGTA 60.123 66.667 0.00 0.00 0.00 3.69
2653 5030 2.508751 GCGAGGGGAGATGGGGTAC 61.509 68.421 0.00 0.00 0.00 3.34
2654 5031 1.075525 CGAGGGGAGATGGGGTACA 60.076 63.158 0.00 0.00 0.00 2.90
2657 5034 1.920351 GAGGGGAGATGGGGTACAAAA 59.080 52.381 0.00 0.00 0.00 2.44
2755 5133 7.039784 ACTGAGAATTTGCTAAATTGCAGGTTA 60.040 33.333 21.29 0.00 44.27 2.85
2847 5225 0.034670 GAGGAGCAAGGTCAATGGCT 60.035 55.000 1.42 0.00 39.75 4.75
2904 5282 3.100671 AGAGAAGGCCAAGAAGATACGT 58.899 45.455 5.01 0.00 0.00 3.57
2913 5291 3.684788 CCAAGAAGATACGTTCAACAGGG 59.315 47.826 0.00 0.00 0.00 4.45
2954 5332 3.321396 TGCTTTTGAGACATTGCCATTCA 59.679 39.130 0.00 0.00 0.00 2.57
2971 5349 6.128729 GCCATTCAACAAAATTTGAAACGAG 58.871 36.000 13.19 0.00 46.06 4.18
3008 5386 5.387855 GCTTGAATGCGATATAAGTCTCACG 60.388 44.000 0.00 0.00 0.00 4.35
3069 5452 9.462606 TTGATGAGTGATAAGAGTGTAGAGTTA 57.537 33.333 0.00 0.00 0.00 2.24
3104 5487 4.955811 ATTGCATTGCATCAGGATCAAT 57.044 36.364 12.95 0.00 38.76 2.57
3189 5572 4.225942 TTCAAGATGAAGCAGGGACTGTAT 59.774 41.667 0.00 0.00 44.78 2.29
3211 5594 5.063180 TGAAAATAGGCATTGCAACAGAG 57.937 39.130 11.39 0.00 0.00 3.35
3241 5624 2.744243 GCTCCCCTGCATCAGCTCT 61.744 63.158 0.00 0.00 42.74 4.09
3247 5630 1.409251 CCTGCATCAGCTCTAGGCCT 61.409 60.000 11.78 11.78 43.05 5.19
3407 5792 5.049474 TGTTTTCTTGGTGTCTCAATCGATG 60.049 40.000 0.00 0.00 0.00 3.84
3599 5988 8.869109 TCCAGAACATTAATGAGAAAATTTGGT 58.131 29.630 22.16 0.00 0.00 3.67
3642 6035 0.180171 TACAATGGCTCATCCCGTGG 59.820 55.000 0.00 0.00 0.00 4.94
3657 6050 2.493278 CCCGTGGCTTTTCATCTTCATT 59.507 45.455 0.00 0.00 0.00 2.57
3660 6053 4.990426 CCGTGGCTTTTCATCTTCATTTTT 59.010 37.500 0.00 0.00 0.00 1.94
3688 6081 3.330267 CTGTGAAGACAGTAGGAAAGGC 58.670 50.000 0.00 0.00 44.15 4.35
3689 6082 2.972713 TGTGAAGACAGTAGGAAAGGCT 59.027 45.455 0.00 0.00 0.00 4.58
3690 6083 3.006967 TGTGAAGACAGTAGGAAAGGCTC 59.993 47.826 0.00 0.00 0.00 4.70
3691 6084 2.567615 TGAAGACAGTAGGAAAGGCTCC 59.432 50.000 0.00 0.00 45.81 4.70
3701 6094 3.778954 GGAAAGGCTCCTACTGCATAT 57.221 47.619 0.00 0.00 41.61 1.78
3702 6095 4.891992 GGAAAGGCTCCTACTGCATATA 57.108 45.455 0.00 0.00 41.61 0.86
3703 6096 5.428184 GGAAAGGCTCCTACTGCATATAT 57.572 43.478 0.00 0.00 41.61 0.86
3704 6097 6.546428 GGAAAGGCTCCTACTGCATATATA 57.454 41.667 0.00 0.00 41.61 0.86
3705 6098 7.130681 GGAAAGGCTCCTACTGCATATATAT 57.869 40.000 0.00 0.00 41.61 0.86
3706 6099 7.569240 GGAAAGGCTCCTACTGCATATATATT 58.431 38.462 0.00 0.00 41.61 1.28
3707 6100 8.705594 GGAAAGGCTCCTACTGCATATATATTA 58.294 37.037 0.00 0.00 41.61 0.98
3708 6101 9.535878 GAAAGGCTCCTACTGCATATATATTAC 57.464 37.037 0.00 0.00 0.00 1.89
3709 6102 8.846423 AAGGCTCCTACTGCATATATATTACT 57.154 34.615 0.00 0.00 0.00 2.24
3710 6103 9.937876 AAGGCTCCTACTGCATATATATTACTA 57.062 33.333 0.00 0.00 0.00 1.82
3711 6104 9.937876 AGGCTCCTACTGCATATATATTACTAA 57.062 33.333 0.00 0.00 0.00 2.24
3722 6115 9.614792 GCATATATATTACTAAAACCTCAGGGG 57.385 37.037 0.00 0.00 41.89 4.79
3724 6117 9.869574 ATATATATTACTAAAACCTCAGGGGGT 57.130 33.333 0.00 0.00 42.05 4.95
3726 6119 5.705397 ATTACTAAAACCTCAGGGGGTAC 57.295 43.478 0.00 0.00 38.87 3.34
3727 6120 2.994355 ACTAAAACCTCAGGGGGTACA 58.006 47.619 0.00 0.00 38.87 2.90
3728 6121 3.329277 ACTAAAACCTCAGGGGGTACAA 58.671 45.455 0.00 0.00 38.87 2.41
3729 6122 3.920841 ACTAAAACCTCAGGGGGTACAAT 59.079 43.478 0.00 0.00 38.87 2.71
3730 6123 3.915346 AAAACCTCAGGGGGTACAATT 57.085 42.857 0.00 0.00 38.87 2.32
3731 6124 5.552766 ACTAAAACCTCAGGGGGTACAATTA 59.447 40.000 0.00 0.00 38.87 1.40
3732 6125 4.311520 AAACCTCAGGGGGTACAATTAC 57.688 45.455 0.00 0.00 38.87 1.89
3733 6126 2.923908 ACCTCAGGGGGTACAATTACA 58.076 47.619 0.00 0.00 37.90 2.41
3734 6127 3.470868 ACCTCAGGGGGTACAATTACAT 58.529 45.455 0.00 0.00 37.90 2.29
3735 6128 3.202151 ACCTCAGGGGGTACAATTACATG 59.798 47.826 0.00 0.00 37.90 3.21
3736 6129 3.202151 CCTCAGGGGGTACAATTACATGT 59.798 47.826 2.69 2.69 37.32 3.21
3737 6130 4.199310 CTCAGGGGGTACAATTACATGTG 58.801 47.826 9.11 0.00 34.75 3.21
3738 6131 3.589735 TCAGGGGGTACAATTACATGTGT 59.410 43.478 9.11 0.00 34.75 3.72
3739 6132 3.694072 CAGGGGGTACAATTACATGTGTG 59.306 47.826 9.11 6.54 34.75 3.82
3740 6133 3.589735 AGGGGGTACAATTACATGTGTGA 59.410 43.478 9.11 0.00 34.75 3.58
3741 6134 4.229582 AGGGGGTACAATTACATGTGTGAT 59.770 41.667 9.11 0.00 34.75 3.06
3742 6135 4.953579 GGGGGTACAATTACATGTGTGATT 59.046 41.667 9.11 3.46 35.04 2.57
3743 6136 5.420739 GGGGGTACAATTACATGTGTGATTT 59.579 40.000 9.11 1.39 32.81 2.17
3744 6137 6.603997 GGGGGTACAATTACATGTGTGATTTA 59.396 38.462 9.11 0.59 32.81 1.40
3745 6138 7.415877 GGGGGTACAATTACATGTGTGATTTAC 60.416 40.741 9.11 10.26 32.81 2.01
3746 6139 7.121463 GGGGTACAATTACATGTGTGATTTACA 59.879 37.037 9.11 0.00 32.81 2.41
3747 6140 8.682710 GGGTACAATTACATGTGTGATTTACAT 58.317 33.333 9.11 0.00 42.24 2.29
3757 6150 4.946772 TGTGTGATTTACATACATGGGTGG 59.053 41.667 0.00 0.00 43.62 4.61
3758 6151 4.947388 GTGTGATTTACATACATGGGTGGT 59.053 41.667 0.00 0.00 42.24 4.16
3759 6152 5.417580 GTGTGATTTACATACATGGGTGGTT 59.582 40.000 0.00 0.00 42.24 3.67
3760 6153 5.417266 TGTGATTTACATACATGGGTGGTTG 59.583 40.000 0.00 0.00 33.42 3.77
3761 6154 5.417580 GTGATTTACATACATGGGTGGTTGT 59.582 40.000 0.00 0.00 0.00 3.32
3762 6155 5.417266 TGATTTACATACATGGGTGGTTGTG 59.583 40.000 0.00 0.00 0.00 3.33
3763 6156 2.214376 ACATACATGGGTGGTTGTGG 57.786 50.000 0.00 0.00 0.00 4.17
3764 6157 0.817013 CATACATGGGTGGTTGTGGC 59.183 55.000 0.00 0.00 0.00 5.01
3765 6158 0.407528 ATACATGGGTGGTTGTGGCA 59.592 50.000 0.00 0.00 0.00 4.92
3766 6159 0.538516 TACATGGGTGGTTGTGGCAC 60.539 55.000 11.55 11.55 0.00 5.01
3767 6160 2.203625 ATGGGTGGTTGTGGCACC 60.204 61.111 16.26 0.00 38.22 5.01
3768 6161 3.080158 ATGGGTGGTTGTGGCACCA 62.080 57.895 16.26 2.70 45.13 4.17
3795 6188 3.412237 GGCACCCTAGTTTACAAGACA 57.588 47.619 0.00 0.00 0.00 3.41
3796 6189 3.072211 GGCACCCTAGTTTACAAGACAC 58.928 50.000 0.00 0.00 0.00 3.67
3797 6190 3.072211 GCACCCTAGTTTACAAGACACC 58.928 50.000 0.00 0.00 0.00 4.16
3798 6191 3.244457 GCACCCTAGTTTACAAGACACCT 60.244 47.826 0.00 0.00 0.00 4.00
3799 6192 4.020839 GCACCCTAGTTTACAAGACACCTA 60.021 45.833 0.00 0.00 0.00 3.08
3800 6193 5.476614 CACCCTAGTTTACAAGACACCTAC 58.523 45.833 0.00 0.00 0.00 3.18
3801 6194 5.245526 CACCCTAGTTTACAAGACACCTACT 59.754 44.000 0.00 0.00 0.00 2.57
3802 6195 5.245526 ACCCTAGTTTACAAGACACCTACTG 59.754 44.000 0.00 0.00 0.00 2.74
3803 6196 5.245526 CCCTAGTTTACAAGACACCTACTGT 59.754 44.000 0.00 0.00 34.96 3.55
3804 6197 6.435277 CCCTAGTTTACAAGACACCTACTGTA 59.565 42.308 0.00 0.00 31.03 2.74
3805 6198 7.123847 CCCTAGTTTACAAGACACCTACTGTAT 59.876 40.741 0.00 0.00 31.03 2.29
3806 6199 7.974501 CCTAGTTTACAAGACACCTACTGTATG 59.025 40.741 0.00 0.00 31.03 2.39
3807 6200 6.698380 AGTTTACAAGACACCTACTGTATGG 58.302 40.000 0.00 0.00 31.03 2.74
3808 6201 6.495872 AGTTTACAAGACACCTACTGTATGGA 59.504 38.462 9.37 0.00 31.03 3.41
3809 6202 4.803098 ACAAGACACCTACTGTATGGAC 57.197 45.455 9.37 0.00 31.03 4.02
3810 6203 3.514309 ACAAGACACCTACTGTATGGACC 59.486 47.826 9.37 0.00 31.03 4.46
3811 6204 2.748388 AGACACCTACTGTATGGACCC 58.252 52.381 9.37 0.00 31.03 4.46
3812 6205 2.043939 AGACACCTACTGTATGGACCCA 59.956 50.000 9.37 0.00 31.03 4.51
3813 6206 2.835764 GACACCTACTGTATGGACCCAA 59.164 50.000 9.37 0.00 31.03 4.12
3814 6207 2.838202 ACACCTACTGTATGGACCCAAG 59.162 50.000 9.37 0.00 0.00 3.61
3815 6208 2.838202 CACCTACTGTATGGACCCAAGT 59.162 50.000 9.37 0.00 0.00 3.16
3816 6209 4.028131 CACCTACTGTATGGACCCAAGTA 58.972 47.826 9.37 0.00 0.00 2.24
3817 6210 4.654262 CACCTACTGTATGGACCCAAGTAT 59.346 45.833 9.37 0.00 0.00 2.12
3818 6211 4.654262 ACCTACTGTATGGACCCAAGTATG 59.346 45.833 9.37 0.00 0.00 2.39
3820 6213 2.172717 ACTGTATGGACCCAAGTATGGC 59.827 50.000 0.00 0.00 46.09 4.40
3821 6214 2.172505 CTGTATGGACCCAAGTATGGCA 59.827 50.000 0.00 0.00 46.09 4.92
3822 6215 2.172505 TGTATGGACCCAAGTATGGCAG 59.827 50.000 0.00 0.00 46.09 4.85
3823 6216 1.595311 ATGGACCCAAGTATGGCAGA 58.405 50.000 0.00 0.00 46.09 4.26
3824 6217 1.595311 TGGACCCAAGTATGGCAGAT 58.405 50.000 0.00 0.00 46.09 2.90
3825 6218 2.770447 TGGACCCAAGTATGGCAGATA 58.230 47.619 0.00 0.00 46.09 1.98
3826 6219 2.438021 TGGACCCAAGTATGGCAGATAC 59.562 50.000 0.00 0.00 46.09 2.24
3827 6220 2.438021 GGACCCAAGTATGGCAGATACA 59.562 50.000 7.61 0.00 46.09 2.29
3828 6221 3.118038 GGACCCAAGTATGGCAGATACAA 60.118 47.826 7.61 0.00 46.09 2.41
3829 6222 4.446311 GGACCCAAGTATGGCAGATACAAT 60.446 45.833 7.61 0.00 46.09 2.71
3830 6223 5.221843 GGACCCAAGTATGGCAGATACAATA 60.222 44.000 7.61 0.00 46.09 1.90
3831 6224 6.454223 ACCCAAGTATGGCAGATACAATAT 57.546 37.500 7.61 0.00 46.09 1.28
3832 6225 6.240894 ACCCAAGTATGGCAGATACAATATG 58.759 40.000 7.61 2.48 46.09 1.78
3833 6226 6.183361 ACCCAAGTATGGCAGATACAATATGT 60.183 38.462 7.61 0.00 46.09 2.29
3834 6227 6.716628 CCCAAGTATGGCAGATACAATATGTT 59.283 38.462 7.61 0.00 46.09 2.71
3835 6228 7.308770 CCCAAGTATGGCAGATACAATATGTTG 60.309 40.741 0.00 0.00 46.09 3.33
3836 6229 7.229306 CCAAGTATGGCAGATACAATATGTTGT 59.771 37.037 12.73 12.73 44.56 3.32
3837 6230 8.623903 CAAGTATGGCAGATACAATATGTTGTT 58.376 33.333 13.37 1.84 46.07 2.83
3838 6231 8.752005 AGTATGGCAGATACAATATGTTGTTT 57.248 30.769 13.37 5.56 46.07 2.83
3839 6232 8.623903 AGTATGGCAGATACAATATGTTGTTTG 58.376 33.333 13.37 10.51 46.07 2.93
3840 6233 6.206395 TGGCAGATACAATATGTTGTTTGG 57.794 37.500 13.37 2.97 46.07 3.28
3841 6234 5.948758 TGGCAGATACAATATGTTGTTTGGA 59.051 36.000 13.37 0.00 46.07 3.53
3842 6235 6.435591 TGGCAGATACAATATGTTGTTTGGAA 59.564 34.615 13.37 0.00 46.07 3.53
3843 6236 6.974622 GGCAGATACAATATGTTGTTTGGAAG 59.025 38.462 13.37 1.40 46.07 3.46
3844 6237 6.974622 GCAGATACAATATGTTGTTTGGAAGG 59.025 38.462 13.37 0.00 46.07 3.46
3845 6238 7.362920 GCAGATACAATATGTTGTTTGGAAGGT 60.363 37.037 13.37 0.00 46.07 3.50
3846 6239 8.522830 CAGATACAATATGTTGTTTGGAAGGTT 58.477 33.333 13.37 0.00 46.07 3.50
3847 6240 9.088987 AGATACAATATGTTGTTTGGAAGGTTT 57.911 29.630 13.37 0.00 46.07 3.27
3848 6241 9.353999 GATACAATATGTTGTTTGGAAGGTTTC 57.646 33.333 13.37 0.00 46.07 2.78
3849 6242 7.118496 ACAATATGTTGTTTGGAAGGTTTCA 57.882 32.000 1.42 0.00 46.07 2.69
3850 6243 6.983890 ACAATATGTTGTTTGGAAGGTTTCAC 59.016 34.615 1.42 0.00 46.07 3.18
3851 6244 6.976934 ATATGTTGTTTGGAAGGTTTCACT 57.023 33.333 0.00 0.00 0.00 3.41
3852 6245 4.712122 TGTTGTTTGGAAGGTTTCACTC 57.288 40.909 0.00 0.00 0.00 3.51
3853 6246 4.340617 TGTTGTTTGGAAGGTTTCACTCT 58.659 39.130 0.00 0.00 0.00 3.24
3854 6247 5.502079 TGTTGTTTGGAAGGTTTCACTCTA 58.498 37.500 0.00 0.00 0.00 2.43
3855 6248 6.126409 TGTTGTTTGGAAGGTTTCACTCTAT 58.874 36.000 0.00 0.00 0.00 1.98
3856 6249 7.284074 TGTTGTTTGGAAGGTTTCACTCTATA 58.716 34.615 0.00 0.00 0.00 1.31
3857 6250 7.942341 TGTTGTTTGGAAGGTTTCACTCTATAT 59.058 33.333 0.00 0.00 0.00 0.86
3858 6251 8.451748 GTTGTTTGGAAGGTTTCACTCTATATC 58.548 37.037 0.00 0.00 0.00 1.63
3859 6252 7.918076 TGTTTGGAAGGTTTCACTCTATATCT 58.082 34.615 0.00 0.00 0.00 1.98
3860 6253 9.042450 TGTTTGGAAGGTTTCACTCTATATCTA 57.958 33.333 0.00 0.00 0.00 1.98
3861 6254 9.886132 GTTTGGAAGGTTTCACTCTATATCTAA 57.114 33.333 0.00 0.00 0.00 2.10
3863 6256 9.488762 TTGGAAGGTTTCACTCTATATCTAAGA 57.511 33.333 0.00 0.00 0.00 2.10
3864 6257 9.661954 TGGAAGGTTTCACTCTATATCTAAGAT 57.338 33.333 0.00 0.00 0.00 2.40
3880 6273 9.965902 ATATCTAAGATTGTCAAAGTCCAACTT 57.034 29.630 0.00 0.00 40.80 2.66
3882 6275 9.793259 ATCTAAGATTGTCAAAGTCCAACTTAA 57.207 29.630 0.00 0.00 37.47 1.85
3883 6276 9.621629 TCTAAGATTGTCAAAGTCCAACTTAAA 57.378 29.630 0.00 0.00 37.47 1.52
3884 6277 9.665264 CTAAGATTGTCAAAGTCCAACTTAAAC 57.335 33.333 0.00 0.00 37.47 2.01
3885 6278 7.039313 AGATTGTCAAAGTCCAACTTAAACC 57.961 36.000 0.00 0.00 37.47 3.27
3886 6279 6.833933 AGATTGTCAAAGTCCAACTTAAACCT 59.166 34.615 0.00 0.00 37.47 3.50
3887 6280 6.445357 TTGTCAAAGTCCAACTTAAACCTC 57.555 37.500 0.00 0.00 37.47 3.85
3888 6281 5.751586 TGTCAAAGTCCAACTTAAACCTCT 58.248 37.500 0.00 0.00 37.47 3.69
3889 6282 5.588648 TGTCAAAGTCCAACTTAAACCTCTG 59.411 40.000 0.00 0.00 37.47 3.35
3890 6283 5.589050 GTCAAAGTCCAACTTAAACCTCTGT 59.411 40.000 0.00 0.00 37.47 3.41
3891 6284 6.095021 GTCAAAGTCCAACTTAAACCTCTGTT 59.905 38.462 0.00 0.00 37.47 3.16
3892 6285 6.661805 TCAAAGTCCAACTTAAACCTCTGTTT 59.338 34.615 0.00 0.00 46.22 2.83
3893 6286 6.694877 AAGTCCAACTTAAACCTCTGTTTC 57.305 37.500 0.00 0.00 43.50 2.78
3894 6287 5.131067 AGTCCAACTTAAACCTCTGTTTCC 58.869 41.667 0.00 0.00 43.50 3.13
3895 6288 4.885325 GTCCAACTTAAACCTCTGTTTCCA 59.115 41.667 0.00 0.00 43.50 3.53
3896 6289 5.008712 GTCCAACTTAAACCTCTGTTTCCAG 59.991 44.000 0.00 0.00 43.50 3.86
3897 6290 4.278419 CCAACTTAAACCTCTGTTTCCAGG 59.722 45.833 0.00 0.00 43.50 4.45
3898 6291 5.130350 CAACTTAAACCTCTGTTTCCAGGA 58.870 41.667 0.00 0.00 43.50 3.86
3899 6292 5.382664 ACTTAAACCTCTGTTTCCAGGAA 57.617 39.130 0.00 0.00 43.50 3.36
3900 6293 5.377478 ACTTAAACCTCTGTTTCCAGGAAG 58.623 41.667 1.07 0.00 43.50 3.46
3901 6294 2.278332 AACCTCTGTTTCCAGGAAGC 57.722 50.000 9.10 9.10 39.31 3.86
3902 6295 1.140312 ACCTCTGTTTCCAGGAAGCA 58.860 50.000 17.19 17.19 39.31 3.91
3903 6296 1.494721 ACCTCTGTTTCCAGGAAGCAA 59.505 47.619 18.53 9.61 39.31 3.91
3904 6297 1.882623 CCTCTGTTTCCAGGAAGCAAC 59.117 52.381 18.53 7.75 39.31 4.17
3905 6298 2.487986 CCTCTGTTTCCAGGAAGCAACT 60.488 50.000 18.53 0.00 39.31 3.16
3906 6299 2.551459 CTCTGTTTCCAGGAAGCAACTG 59.449 50.000 18.53 10.70 39.31 3.16
3907 6300 2.172505 TCTGTTTCCAGGAAGCAACTGA 59.827 45.455 18.53 12.61 39.31 3.41
3908 6301 3.152341 CTGTTTCCAGGAAGCAACTGAT 58.848 45.455 18.53 0.00 38.20 2.90
3909 6302 2.886523 TGTTTCCAGGAAGCAACTGATG 59.113 45.455 16.00 0.00 38.20 3.07
3910 6303 2.205022 TTCCAGGAAGCAACTGATGG 57.795 50.000 0.00 0.00 38.20 3.51
3911 6304 0.322816 TCCAGGAAGCAACTGATGGC 60.323 55.000 4.17 0.00 38.20 4.40
3912 6305 0.323178 CCAGGAAGCAACTGATGGCT 60.323 55.000 4.17 0.00 43.46 4.75
3921 6314 5.077134 AGCAACTGATGGCTTAATTTTCC 57.923 39.130 0.00 0.00 36.92 3.13
3922 6315 4.774200 AGCAACTGATGGCTTAATTTTCCT 59.226 37.500 0.00 0.00 36.92 3.36
3923 6316 5.951747 AGCAACTGATGGCTTAATTTTCCTA 59.048 36.000 0.00 0.00 36.92 2.94
3924 6317 6.437162 AGCAACTGATGGCTTAATTTTCCTAA 59.563 34.615 0.00 0.00 36.92 2.69
3925 6318 7.039082 AGCAACTGATGGCTTAATTTTCCTAAA 60.039 33.333 0.00 0.00 36.92 1.85
3926 6319 7.276438 GCAACTGATGGCTTAATTTTCCTAAAG 59.724 37.037 0.00 0.00 0.00 1.85
3927 6320 8.306761 CAACTGATGGCTTAATTTTCCTAAAGT 58.693 33.333 0.00 0.00 0.00 2.66
3928 6321 7.830739 ACTGATGGCTTAATTTTCCTAAAGTG 58.169 34.615 0.00 0.00 0.00 3.16
3929 6322 7.093771 ACTGATGGCTTAATTTTCCTAAAGTGG 60.094 37.037 0.00 0.00 0.00 4.00
3930 6323 6.723977 TGATGGCTTAATTTTCCTAAAGTGGT 59.276 34.615 0.00 0.00 0.00 4.16
3931 6324 6.339587 TGGCTTAATTTTCCTAAAGTGGTG 57.660 37.500 0.00 0.00 0.00 4.17
3932 6325 5.245075 TGGCTTAATTTTCCTAAAGTGGTGG 59.755 40.000 0.00 0.00 0.00 4.61
3933 6326 5.245301 GGCTTAATTTTCCTAAAGTGGTGGT 59.755 40.000 0.00 0.00 0.00 4.16
3934 6327 6.239487 GGCTTAATTTTCCTAAAGTGGTGGTT 60.239 38.462 0.00 0.00 0.00 3.67
3935 6328 6.645003 GCTTAATTTTCCTAAAGTGGTGGTTG 59.355 38.462 0.00 0.00 0.00 3.77
3936 6329 7.663043 TTAATTTTCCTAAAGTGGTGGTTGT 57.337 32.000 0.00 0.00 0.00 3.32
3937 6330 6.553953 AATTTTCCTAAAGTGGTGGTTGTT 57.446 33.333 0.00 0.00 0.00 2.83
3938 6331 6.553953 ATTTTCCTAAAGTGGTGGTTGTTT 57.446 33.333 0.00 0.00 0.00 2.83
3939 6332 5.585820 TTTCCTAAAGTGGTGGTTGTTTC 57.414 39.130 0.00 0.00 0.00 2.78
3940 6333 4.513406 TCCTAAAGTGGTGGTTGTTTCT 57.487 40.909 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 7.047891 AGTCTCTCTGTTTGTTGTATGACAAA 58.952 34.615 0.00 0.00 44.69 2.83
7 8 6.582636 AGTCTCTCTGTTTGTTGTATGACAA 58.417 36.000 0.00 0.00 37.73 3.18
8 9 6.161855 AGTCTCTCTGTTTGTTGTATGACA 57.838 37.500 0.00 0.00 0.00 3.58
9 10 6.216569 TGAGTCTCTCTGTTTGTTGTATGAC 58.783 40.000 0.65 0.00 0.00 3.06
10 11 6.405278 TGAGTCTCTCTGTTTGTTGTATGA 57.595 37.500 0.65 0.00 0.00 2.15
11 12 6.073548 GGTTGAGTCTCTCTGTTTGTTGTATG 60.074 42.308 0.65 0.00 0.00 2.39
12 13 5.992217 GGTTGAGTCTCTCTGTTTGTTGTAT 59.008 40.000 0.65 0.00 0.00 2.29
13 14 5.105106 TGGTTGAGTCTCTCTGTTTGTTGTA 60.105 40.000 0.65 0.00 0.00 2.41
14 15 4.192317 GGTTGAGTCTCTCTGTTTGTTGT 58.808 43.478 0.65 0.00 0.00 3.32
15 16 4.034510 GTGGTTGAGTCTCTCTGTTTGTTG 59.965 45.833 0.65 0.00 0.00 3.33
16 17 4.192317 GTGGTTGAGTCTCTCTGTTTGTT 58.808 43.478 0.65 0.00 0.00 2.83
17 18 3.197766 TGTGGTTGAGTCTCTCTGTTTGT 59.802 43.478 0.65 0.00 0.00 2.83
18 19 3.797039 TGTGGTTGAGTCTCTCTGTTTG 58.203 45.455 0.65 0.00 0.00 2.93
19 20 4.101585 TCATGTGGTTGAGTCTCTCTGTTT 59.898 41.667 0.65 0.00 0.00 2.83
20 21 3.643320 TCATGTGGTTGAGTCTCTCTGTT 59.357 43.478 0.65 0.00 0.00 3.16
21 22 3.234353 TCATGTGGTTGAGTCTCTCTGT 58.766 45.455 0.65 0.00 0.00 3.41
22 23 3.949842 TCATGTGGTTGAGTCTCTCTG 57.050 47.619 0.65 0.00 0.00 3.35
23 24 3.900601 AGTTCATGTGGTTGAGTCTCTCT 59.099 43.478 0.65 0.00 0.00 3.10
24 25 4.264460 AGTTCATGTGGTTGAGTCTCTC 57.736 45.455 0.65 0.00 0.00 3.20
25 26 4.835615 ACTAGTTCATGTGGTTGAGTCTCT 59.164 41.667 0.65 0.00 0.00 3.10
26 27 4.926238 CACTAGTTCATGTGGTTGAGTCTC 59.074 45.833 0.00 0.00 0.00 3.36
27 28 4.800914 GCACTAGTTCATGTGGTTGAGTCT 60.801 45.833 0.00 0.00 34.99 3.24
28 29 3.433615 GCACTAGTTCATGTGGTTGAGTC 59.566 47.826 0.00 0.00 34.99 3.36
29 30 3.403038 GCACTAGTTCATGTGGTTGAGT 58.597 45.455 0.00 0.00 34.99 3.41
30 31 2.744202 GGCACTAGTTCATGTGGTTGAG 59.256 50.000 0.00 0.00 34.99 3.02
31 32 2.105649 TGGCACTAGTTCATGTGGTTGA 59.894 45.455 0.00 0.00 34.99 3.18
32 33 2.503331 TGGCACTAGTTCATGTGGTTG 58.497 47.619 0.00 0.00 34.99 3.77
33 34 2.949177 TGGCACTAGTTCATGTGGTT 57.051 45.000 0.00 0.00 34.99 3.67
34 35 2.949177 TTGGCACTAGTTCATGTGGT 57.051 45.000 0.00 0.00 34.99 4.16
35 36 4.298332 GTTTTTGGCACTAGTTCATGTGG 58.702 43.478 0.00 0.00 34.99 4.17
36 37 4.037923 AGGTTTTTGGCACTAGTTCATGTG 59.962 41.667 0.00 0.00 37.26 3.21
37 38 4.215109 AGGTTTTTGGCACTAGTTCATGT 58.785 39.130 0.00 0.00 0.00 3.21
38 39 4.613622 CGAGGTTTTTGGCACTAGTTCATG 60.614 45.833 0.00 0.00 0.00 3.07
39 40 3.502211 CGAGGTTTTTGGCACTAGTTCAT 59.498 43.478 0.00 0.00 0.00 2.57
40 41 2.875933 CGAGGTTTTTGGCACTAGTTCA 59.124 45.455 0.00 0.00 0.00 3.18
41 42 2.350484 GCGAGGTTTTTGGCACTAGTTC 60.350 50.000 0.00 0.00 0.00 3.01
42 43 1.607148 GCGAGGTTTTTGGCACTAGTT 59.393 47.619 0.00 0.00 0.00 2.24
43 44 1.235724 GCGAGGTTTTTGGCACTAGT 58.764 50.000 0.00 0.00 0.00 2.57
44 45 0.165944 CGCGAGGTTTTTGGCACTAG 59.834 55.000 0.00 0.00 0.00 2.57
45 46 2.240230 CGCGAGGTTTTTGGCACTA 58.760 52.632 0.00 0.00 0.00 2.74
46 47 3.030652 CGCGAGGTTTTTGGCACT 58.969 55.556 0.00 0.00 0.00 4.40
58 59 3.493272 CTCATTATACACTAGCCGCGAG 58.507 50.000 8.23 0.00 0.00 5.03
59 60 2.351447 GCTCATTATACACTAGCCGCGA 60.351 50.000 8.23 0.00 0.00 5.87
60 61 1.986378 GCTCATTATACACTAGCCGCG 59.014 52.381 0.00 0.00 0.00 6.46
61 62 3.305398 AGCTCATTATACACTAGCCGC 57.695 47.619 0.00 0.00 33.63 6.53
62 63 8.406297 TGATATTAGCTCATTATACACTAGCCG 58.594 37.037 0.00 0.00 33.63 5.52
73 74 9.415008 GGAGTAGGAGATGATATTAGCTCATTA 57.585 37.037 13.94 4.18 34.87 1.90
74 75 7.344352 GGGAGTAGGAGATGATATTAGCTCATT 59.656 40.741 13.94 5.02 34.87 2.57
75 76 6.838612 GGGAGTAGGAGATGATATTAGCTCAT 59.161 42.308 13.94 9.75 34.87 2.90
76 77 6.011185 AGGGAGTAGGAGATGATATTAGCTCA 60.011 42.308 13.94 0.00 34.87 4.26
77 78 6.431722 AGGGAGTAGGAGATGATATTAGCTC 58.568 44.000 4.25 4.25 32.50 4.09
78 79 6.416044 AGGGAGTAGGAGATGATATTAGCT 57.584 41.667 0.00 0.00 0.00 3.32
79 80 5.596772 GGAGGGAGTAGGAGATGATATTAGC 59.403 48.000 0.00 0.00 0.00 3.09
80 81 6.736581 TGGAGGGAGTAGGAGATGATATTAG 58.263 44.000 0.00 0.00 0.00 1.73
81 82 6.736561 TGGAGGGAGTAGGAGATGATATTA 57.263 41.667 0.00 0.00 0.00 0.98
82 83 5.623551 TGGAGGGAGTAGGAGATGATATT 57.376 43.478 0.00 0.00 0.00 1.28
83 84 5.829858 ATGGAGGGAGTAGGAGATGATAT 57.170 43.478 0.00 0.00 0.00 1.63
84 85 5.519263 GGAATGGAGGGAGTAGGAGATGATA 60.519 48.000 0.00 0.00 0.00 2.15
85 86 4.424842 GAATGGAGGGAGTAGGAGATGAT 58.575 47.826 0.00 0.00 0.00 2.45
86 87 3.438668 GGAATGGAGGGAGTAGGAGATGA 60.439 52.174 0.00 0.00 0.00 2.92
87 88 2.903135 GGAATGGAGGGAGTAGGAGATG 59.097 54.545 0.00 0.00 0.00 2.90
88 89 2.491825 CGGAATGGAGGGAGTAGGAGAT 60.492 54.545 0.00 0.00 0.00 2.75
89 90 1.133450 CGGAATGGAGGGAGTAGGAGA 60.133 57.143 0.00 0.00 0.00 3.71
90 91 1.133450 TCGGAATGGAGGGAGTAGGAG 60.133 57.143 0.00 0.00 0.00 3.69
91 92 0.931468 TCGGAATGGAGGGAGTAGGA 59.069 55.000 0.00 0.00 0.00 2.94
92 93 1.789523 TTCGGAATGGAGGGAGTAGG 58.210 55.000 0.00 0.00 0.00 3.18
93 94 4.833380 TCTATTTCGGAATGGAGGGAGTAG 59.167 45.833 0.00 0.00 30.37 2.57
94 95 4.811498 TCTATTTCGGAATGGAGGGAGTA 58.189 43.478 0.00 0.00 30.37 2.59
95 96 3.654273 TCTATTTCGGAATGGAGGGAGT 58.346 45.455 0.00 0.00 30.37 3.85
96 97 4.284490 TCATCTATTTCGGAATGGAGGGAG 59.716 45.833 13.61 2.24 36.39 4.30
97 98 4.040461 GTCATCTATTTCGGAATGGAGGGA 59.960 45.833 13.61 8.36 36.39 4.20
98 99 4.319177 GTCATCTATTTCGGAATGGAGGG 58.681 47.826 13.61 6.32 36.39 4.30
99 100 4.319177 GGTCATCTATTTCGGAATGGAGG 58.681 47.826 8.04 8.04 36.39 4.30
100 101 4.202357 TGGGTCATCTATTTCGGAATGGAG 60.202 45.833 8.58 1.59 36.39 3.86
101 102 3.714280 TGGGTCATCTATTTCGGAATGGA 59.286 43.478 4.80 4.80 37.20 3.41
102 103 4.085357 TGGGTCATCTATTTCGGAATGG 57.915 45.455 0.00 0.00 0.00 3.16
103 104 5.126067 AGTTGGGTCATCTATTTCGGAATG 58.874 41.667 0.00 0.00 0.00 2.67
104 105 5.373812 AGTTGGGTCATCTATTTCGGAAT 57.626 39.130 0.00 0.00 0.00 3.01
105 106 4.837093 AGTTGGGTCATCTATTTCGGAA 57.163 40.909 0.00 0.00 0.00 4.30
106 107 4.837093 AAGTTGGGTCATCTATTTCGGA 57.163 40.909 0.00 0.00 0.00 4.55
107 108 7.931948 AGTATAAAGTTGGGTCATCTATTTCGG 59.068 37.037 0.00 0.00 0.00 4.30
108 109 8.888579 AGTATAAAGTTGGGTCATCTATTTCG 57.111 34.615 0.00 0.00 0.00 3.46
155 156 9.719355 GTTCCAAAATAAATGACCCAACTTTAT 57.281 29.630 0.00 0.00 0.00 1.40
156 157 8.705594 TGTTCCAAAATAAATGACCCAACTTTA 58.294 29.630 0.00 0.00 0.00 1.85
157 158 7.569240 TGTTCCAAAATAAATGACCCAACTTT 58.431 30.769 0.00 0.00 0.00 2.66
158 159 7.130681 TGTTCCAAAATAAATGACCCAACTT 57.869 32.000 0.00 0.00 0.00 2.66
159 160 6.739331 TGTTCCAAAATAAATGACCCAACT 57.261 33.333 0.00 0.00 0.00 3.16
160 161 7.041440 CCTTTGTTCCAAAATAAATGACCCAAC 60.041 37.037 0.00 0.00 0.00 3.77
161 162 6.995091 CCTTTGTTCCAAAATAAATGACCCAA 59.005 34.615 0.00 0.00 0.00 4.12
162 163 6.465035 CCCTTTGTTCCAAAATAAATGACCCA 60.465 38.462 0.00 0.00 0.00 4.51
163 164 5.937540 CCCTTTGTTCCAAAATAAATGACCC 59.062 40.000 0.00 0.00 0.00 4.46
164 165 6.764379 TCCCTTTGTTCCAAAATAAATGACC 58.236 36.000 0.00 0.00 0.00 4.02
165 166 7.441836 ACTCCCTTTGTTCCAAAATAAATGAC 58.558 34.615 0.00 0.00 0.00 3.06
166 167 7.610580 ACTCCCTTTGTTCCAAAATAAATGA 57.389 32.000 0.00 0.00 0.00 2.57
167 168 8.585018 AGTACTCCCTTTGTTCCAAAATAAATG 58.415 33.333 0.00 0.00 0.00 2.32
168 169 8.721133 AGTACTCCCTTTGTTCCAAAATAAAT 57.279 30.769 0.00 0.00 0.00 1.40
169 170 8.417884 CAAGTACTCCCTTTGTTCCAAAATAAA 58.582 33.333 0.00 0.00 0.00 1.40
170 171 7.470841 GCAAGTACTCCCTTTGTTCCAAAATAA 60.471 37.037 0.00 0.00 0.00 1.40
171 172 6.015772 GCAAGTACTCCCTTTGTTCCAAAATA 60.016 38.462 0.00 0.00 0.00 1.40
172 173 5.221441 GCAAGTACTCCCTTTGTTCCAAAAT 60.221 40.000 0.00 0.00 0.00 1.82
173 174 4.098807 GCAAGTACTCCCTTTGTTCCAAAA 59.901 41.667 0.00 0.00 0.00 2.44
174 175 3.634910 GCAAGTACTCCCTTTGTTCCAAA 59.365 43.478 0.00 0.00 0.00 3.28
175 176 3.219281 GCAAGTACTCCCTTTGTTCCAA 58.781 45.455 0.00 0.00 0.00 3.53
176 177 2.173782 TGCAAGTACTCCCTTTGTTCCA 59.826 45.455 0.00 0.00 0.00 3.53
177 178 2.858745 TGCAAGTACTCCCTTTGTTCC 58.141 47.619 0.00 0.00 0.00 3.62
178 179 4.338400 ACTTTGCAAGTACTCCCTTTGTTC 59.662 41.667 0.00 0.00 40.69 3.18
179 180 4.278310 ACTTTGCAAGTACTCCCTTTGTT 58.722 39.130 0.00 0.00 40.69 2.83
180 181 3.898482 ACTTTGCAAGTACTCCCTTTGT 58.102 40.909 0.00 0.00 40.69 2.83
181 182 6.385649 TTTACTTTGCAAGTACTCCCTTTG 57.614 37.500 0.00 0.00 43.30 2.77
182 183 7.412853 TTTTTACTTTGCAAGTACTCCCTTT 57.587 32.000 0.00 0.00 43.30 3.11
222 223 2.215942 AATGTACCCTTGCAAGTCCC 57.784 50.000 24.35 10.13 0.00 4.46
229 237 6.095440 AGACATGACAATTAATGTACCCTTGC 59.905 38.462 0.00 0.00 44.12 4.01
244 252 3.003275 GGAAAAGCGACAAGACATGACAA 59.997 43.478 0.00 0.00 0.00 3.18
249 257 4.499696 CCAAAAGGAAAAGCGACAAGACAT 60.500 41.667 0.00 0.00 0.00 3.06
252 260 3.020984 ACCAAAAGGAAAAGCGACAAGA 58.979 40.909 0.00 0.00 0.00 3.02
265 273 5.448632 GCATTACGACCAATAGACCAAAAGG 60.449 44.000 0.00 0.00 0.00 3.11
286 294 2.102438 CACCAGACGATGCACGCAT 61.102 57.895 3.71 3.71 46.94 4.73
347 355 4.106909 GTTCTAGGCTTCTAGCGAAAGAC 58.893 47.826 0.00 0.00 43.62 3.01
353 361 5.112686 AGATTTTGTTCTAGGCTTCTAGCG 58.887 41.667 0.00 0.00 43.62 4.26
457 465 0.673644 CTTTCCTGGTGCGGTAGGTG 60.674 60.000 0.00 0.00 35.54 4.00
471 479 1.795170 TTTGCCACTCTGCGCTTTCC 61.795 55.000 9.73 0.00 0.00 3.13
599 816 3.119291 GGATTCTCGTGCTCTGTACATG 58.881 50.000 0.00 0.00 0.00 3.21
659 876 7.538575 TGAGAGCTTTCCTTAATGCAAATTAC 58.461 34.615 1.16 0.00 38.03 1.89
660 877 7.701539 TGAGAGCTTTCCTTAATGCAAATTA 57.298 32.000 1.16 0.00 38.03 1.40
661 878 6.594788 TGAGAGCTTTCCTTAATGCAAATT 57.405 33.333 1.16 0.00 38.03 1.82
681 898 2.961741 TGACAGCTAGCCTAGGAATGAG 59.038 50.000 14.75 4.11 0.00 2.90
717 934 1.283321 GAATCCCACCTTCTGCCTTCT 59.717 52.381 0.00 0.00 0.00 2.85
771 988 4.581309 TCATGGAAGCCTTCAAGAATCT 57.419 40.909 6.80 0.00 0.00 2.40
795 1012 7.912610 AGCCTTCCAGATGGGATTGCTTTAG 62.913 48.000 0.00 0.00 45.53 1.85
812 1029 2.164422 GCACTTTGTATTGGAGCCTTCC 59.836 50.000 0.00 0.00 44.31 3.46
870 1087 0.762461 GGGGGAGATGGACAGAGGAG 60.762 65.000 0.00 0.00 0.00 3.69
873 1090 0.264359 AGAGGGGGAGATGGACAGAG 59.736 60.000 0.00 0.00 0.00 3.35
876 1093 0.263172 GAGAGAGGGGGAGATGGACA 59.737 60.000 0.00 0.00 0.00 4.02
877 1094 0.263172 TGAGAGAGGGGGAGATGGAC 59.737 60.000 0.00 0.00 0.00 4.02
878 1095 1.148867 GATGAGAGAGGGGGAGATGGA 59.851 57.143 0.00 0.00 0.00 3.41
890 1107 1.342474 GGAGGTGGTGAGGATGAGAGA 60.342 57.143 0.00 0.00 0.00 3.10
931 1158 4.502962 GCACCAAGCCTTGCATTTATTTA 58.497 39.130 0.00 0.00 38.68 1.40
932 1159 3.337358 GCACCAAGCCTTGCATTTATTT 58.663 40.909 0.00 0.00 38.68 1.40
933 1160 2.976589 GCACCAAGCCTTGCATTTATT 58.023 42.857 0.00 0.00 38.68 1.40
934 1161 2.678471 GCACCAAGCCTTGCATTTAT 57.322 45.000 0.00 0.00 38.68 1.40
955 1182 3.066814 GCAGCTCCAAGGCCAAGG 61.067 66.667 5.01 6.28 0.00 3.61
956 1183 1.593296 GAAGCAGCTCCAAGGCCAAG 61.593 60.000 5.01 0.00 0.00 3.61
957 1184 1.604593 GAAGCAGCTCCAAGGCCAA 60.605 57.895 5.01 0.00 0.00 4.52
958 1185 2.034687 GAAGCAGCTCCAAGGCCA 59.965 61.111 5.01 0.00 0.00 5.36
959 1186 1.303970 AAGAAGCAGCTCCAAGGCC 60.304 57.895 0.00 0.00 0.00 5.19
960 1187 0.322366 AGAAGAAGCAGCTCCAAGGC 60.322 55.000 0.00 0.00 0.00 4.35
998 1225 0.313672 TTTCAAGTTGCCGTCCATGC 59.686 50.000 0.00 0.00 0.00 4.06
1009 1236 2.543777 TACCTCAGCGCTTTCAAGTT 57.456 45.000 7.50 0.00 0.00 2.66
1017 1244 1.941668 GCAGTTCTTTACCTCAGCGCT 60.942 52.381 2.64 2.64 0.00 5.92
1055 1282 6.922957 CAGTTAATCAACCAAGCTTTTAGCAA 59.077 34.615 0.00 0.00 38.43 3.91
1113 1364 2.969628 AAAACTCATCGCTCCGAGAT 57.030 45.000 0.00 0.00 39.91 2.75
1121 1372 5.393962 AGCAGAAAACATAAAACTCATCGC 58.606 37.500 0.00 0.00 0.00 4.58
1126 1377 8.419076 TTTTGGAAGCAGAAAACATAAAACTC 57.581 30.769 0.00 0.00 0.00 3.01
1156 1407 6.647067 AGACGAAGACAAGAAGAACATAAAGG 59.353 38.462 0.00 0.00 0.00 3.11
1157 1408 7.644986 AGACGAAGACAAGAAGAACATAAAG 57.355 36.000 0.00 0.00 0.00 1.85
1162 1413 7.207383 TCATAAAGACGAAGACAAGAAGAACA 58.793 34.615 0.00 0.00 0.00 3.18
1169 1420 3.619038 GCCCTCATAAAGACGAAGACAAG 59.381 47.826 0.00 0.00 0.00 3.16
1184 1435 3.575805 TGGAAAACTTTGAAGCCCTCAT 58.424 40.909 0.00 0.00 32.78 2.90
1185 1436 3.025322 TGGAAAACTTTGAAGCCCTCA 57.975 42.857 0.00 0.00 0.00 3.86
1217 1469 9.601810 ACTAAAAGGGAAGGATCAACTTTTATT 57.398 29.630 14.16 9.52 41.03 1.40
1218 1470 9.601810 AACTAAAAGGGAAGGATCAACTTTTAT 57.398 29.630 14.16 4.67 41.03 1.40
1219 1471 9.429109 AAACTAAAAGGGAAGGATCAACTTTTA 57.571 29.630 0.00 0.00 41.01 1.52
1220 1472 7.914427 AACTAAAAGGGAAGGATCAACTTTT 57.086 32.000 13.01 13.01 42.19 2.27
1221 1473 7.914427 AAACTAAAAGGGAAGGATCAACTTT 57.086 32.000 0.00 0.00 36.47 2.66
1222 1474 8.225416 ACTAAACTAAAAGGGAAGGATCAACTT 58.775 33.333 0.00 0.00 0.00 2.66
1275 1531 3.214696 ACTCCAGAAAACTGAACCCTG 57.785 47.619 0.00 0.00 0.00 4.45
1297 1553 1.569072 ACCACCTTTGTCCCTCTTGTT 59.431 47.619 0.00 0.00 0.00 2.83
1299 1555 2.290323 CCTACCACCTTTGTCCCTCTTG 60.290 54.545 0.00 0.00 0.00 3.02
1305 1561 1.982958 TCTTCCCTACCACCTTTGTCC 59.017 52.381 0.00 0.00 0.00 4.02
1317 1573 7.147391 TGTGGCAGTATTATTGAATCTTCCCTA 60.147 37.037 0.00 0.00 0.00 3.53
1318 1574 6.064717 GTGGCAGTATTATTGAATCTTCCCT 58.935 40.000 0.00 0.00 0.00 4.20
1325 1581 8.806146 AGTTTTCTTGTGGCAGTATTATTGAAT 58.194 29.630 0.00 0.00 0.00 2.57
1329 1585 7.575720 GCTGAGTTTTCTTGTGGCAGTATTATT 60.576 37.037 0.00 0.00 0.00 1.40
1331 1587 5.181245 GCTGAGTTTTCTTGTGGCAGTATTA 59.819 40.000 0.00 0.00 0.00 0.98
1358 1614 6.373005 TTCTTGATCACATACCTCTTCCAA 57.627 37.500 0.00 0.00 0.00 3.53
1378 1634 7.771183 TGTTTGTAAACTGAAAGAGCAATTCT 58.229 30.769 8.74 0.00 39.59 2.40
1381 1637 8.850156 ACTATGTTTGTAAACTGAAAGAGCAAT 58.150 29.630 8.74 0.00 39.59 3.56
1394 1650 9.856488 TTTTTGCAGTTGTACTATGTTTGTAAA 57.144 25.926 0.00 0.00 0.00 2.01
1405 3771 9.762933 AACAATAATGATTTTTGCAGTTGTACT 57.237 25.926 8.03 0.00 0.00 2.73
1445 3811 9.660180 GACAGGAATCTAACTGAAATCTACTTT 57.340 33.333 0.00 0.00 38.09 2.66
1451 3824 4.811557 CGGGACAGGAATCTAACTGAAATC 59.188 45.833 0.00 0.00 38.09 2.17
1455 3828 2.758979 GACGGGACAGGAATCTAACTGA 59.241 50.000 0.00 0.00 38.09 3.41
1458 3831 2.232941 TGTGACGGGACAGGAATCTAAC 59.767 50.000 0.00 0.00 0.00 2.34
1462 3835 0.608640 AGTGTGACGGGACAGGAATC 59.391 55.000 0.00 0.00 0.00 2.52
1469 3842 3.520290 TTGATCATAGTGTGACGGGAC 57.480 47.619 0.00 0.00 40.28 4.46
1473 3846 6.653273 AACTGATTTGATCATAGTGTGACG 57.347 37.500 0.00 0.00 40.28 4.35
1476 3849 9.112725 TGGATTAACTGATTTGATCATAGTGTG 57.887 33.333 0.00 0.00 38.85 3.82
1517 3890 7.002276 TCTGAATATCTGACGGTTCCATAGTA 58.998 38.462 0.00 0.00 0.00 1.82
1519 3892 6.332735 TCTGAATATCTGACGGTTCCATAG 57.667 41.667 0.00 0.00 0.00 2.23
1612 3986 5.221224 ACAAAAATTCAGTTCGGCATGAAGA 60.221 36.000 0.00 0.00 38.72 2.87
1617 3991 6.325919 TCTAACAAAAATTCAGTTCGGCAT 57.674 33.333 0.00 0.00 0.00 4.40
1656 4030 8.970859 TTTTTGGTTTGTTTGGTTCATCATAT 57.029 26.923 0.00 0.00 0.00 1.78
1823 4199 1.213537 CTTGGTTGGCGGCTGAATG 59.786 57.895 11.43 0.00 0.00 2.67
1824 4200 0.962356 CTCTTGGTTGGCGGCTGAAT 60.962 55.000 11.43 0.00 0.00 2.57
1934 4310 6.763715 AATGGGCAATAGATAAGAGTACCA 57.236 37.500 0.00 0.00 0.00 3.25
1939 4315 8.450578 TTGTGTTAATGGGCAATAGATAAGAG 57.549 34.615 0.00 0.00 0.00 2.85
1990 4367 8.101654 ACGCAACATTGTTATAAGAGGTTTTA 57.898 30.769 0.86 0.00 0.00 1.52
1991 4368 6.977213 ACGCAACATTGTTATAAGAGGTTTT 58.023 32.000 0.86 0.00 0.00 2.43
1992 4369 6.569179 ACGCAACATTGTTATAAGAGGTTT 57.431 33.333 0.86 0.00 0.00 3.27
2011 4388 1.011451 TGAAACGATGATGCGACGCA 61.011 50.000 26.68 26.68 44.86 5.24
2014 4391 0.026803 GGCTGAAACGATGATGCGAC 59.973 55.000 0.00 0.00 34.83 5.19
2021 4398 3.303329 CCGATACATTGGCTGAAACGATG 60.303 47.826 0.00 0.00 36.11 3.84
2085 4462 0.765510 ACCTTCTGGTCTGAACCCAC 59.234 55.000 0.00 0.00 44.78 4.61
2086 4463 0.764890 CACCTTCTGGTCTGAACCCA 59.235 55.000 0.00 0.00 46.60 4.51
2116 4493 3.952323 AGAATCATGCATCTTTGGTGGAG 59.048 43.478 0.00 0.00 0.00 3.86
2162 4539 2.225017 TGGTGATTTTCTGGAGGAACCC 60.225 50.000 0.00 0.00 38.00 4.11
2165 4542 3.394274 TGTCTGGTGATTTTCTGGAGGAA 59.606 43.478 0.00 0.00 0.00 3.36
2186 4563 4.339247 TCAAACCTCTTGCTTCCTTTCTTG 59.661 41.667 0.00 0.00 0.00 3.02
2445 4822 5.371526 GCTATGGTCTCCATCATCTTTTCA 58.628 41.667 4.45 0.00 40.74 2.69
2460 4837 0.755698 TCTCCCACTCGGCTATGGTC 60.756 60.000 0.00 0.00 33.80 4.02
2558 4935 4.396522 AGAAAGAGAAACATGCTGCTCTT 58.603 39.130 12.84 12.84 46.46 2.85
2578 4955 6.655003 CACAGTGCCCTATTCTTCTAAAAAGA 59.345 38.462 0.00 0.00 0.00 2.52
2579 4956 6.431234 ACACAGTGCCCTATTCTTCTAAAAAG 59.569 38.462 0.00 0.00 0.00 2.27
2618 4995 9.626045 CTCCCCTCGCAAATAAAATAATTAATC 57.374 33.333 0.00 0.00 0.00 1.75
2638 5015 1.639108 GTTTTGTACCCCATCTCCCCT 59.361 52.381 0.00 0.00 0.00 4.79
2650 5027 6.043411 TGGTTTTGCACATAAGGTTTTGTAC 58.957 36.000 0.00 0.00 0.00 2.90
2651 5028 6.222038 TGGTTTTGCACATAAGGTTTTGTA 57.778 33.333 0.00 0.00 0.00 2.41
2652 5029 5.091261 TGGTTTTGCACATAAGGTTTTGT 57.909 34.783 0.00 0.00 0.00 2.83
2653 5030 6.428385 TTTGGTTTTGCACATAAGGTTTTG 57.572 33.333 0.00 0.00 0.00 2.44
2654 5031 6.825721 TGATTTGGTTTTGCACATAAGGTTTT 59.174 30.769 0.00 0.00 0.00 2.43
2657 5034 5.543507 TGATTTGGTTTTGCACATAAGGT 57.456 34.783 0.00 0.00 0.00 3.50
2755 5133 1.603172 CGCTCTCTTTCTGTCCAACGT 60.603 52.381 0.00 0.00 0.00 3.99
2847 5225 2.553464 TCCTCGTATTTCCTTTCCCCA 58.447 47.619 0.00 0.00 0.00 4.96
2954 5332 6.198216 CCGTTCATCTCGTTTCAAATTTTGTT 59.802 34.615 8.89 0.00 0.00 2.83
2971 5349 4.520846 CAAGCCGCGCCGTTCATC 62.521 66.667 0.00 0.00 0.00 2.92
2984 5362 5.387855 CGTGAGACTTATATCGCATTCAAGC 60.388 44.000 0.00 0.00 30.76 4.01
3008 5386 9.594038 CGTTTTATAATACAATACATGGCTGTC 57.406 33.333 0.00 0.00 36.79 3.51
3189 5572 4.618927 GCTCTGTTGCAATGCCTATTTTCA 60.619 41.667 0.59 0.00 0.00 2.69
3211 5594 1.449778 GGGGAGCTCCTAAACGTGC 60.450 63.158 31.36 12.50 35.95 5.34
3241 5624 7.292827 TGGGTGTATTTGTATGTTATAGGCCTA 59.707 37.037 16.60 16.60 0.00 3.93
3247 5630 7.127493 TCCTGGTGGGTGTATTTGTATGTTATA 59.873 37.037 0.00 0.00 36.25 0.98
3378 5763 5.713792 TGAGACACCAAGAAAACAAAACA 57.286 34.783 0.00 0.00 0.00 2.83
3429 5814 1.133976 GGGGCTTCATGCAGATAGTGT 60.134 52.381 0.00 0.00 45.15 3.55
3599 5988 6.524734 AGATTATGCACATCTTACGGAATCA 58.475 36.000 4.65 0.00 0.00 2.57
3668 6061 2.972713 AGCCTTTCCTACTGTCTTCACA 59.027 45.455 0.00 0.00 0.00 3.58
3669 6062 3.591023 GAGCCTTTCCTACTGTCTTCAC 58.409 50.000 0.00 0.00 0.00 3.18
3670 6063 2.567615 GGAGCCTTTCCTACTGTCTTCA 59.432 50.000 0.00 0.00 43.16 3.02
3671 6064 3.254470 GGAGCCTTTCCTACTGTCTTC 57.746 52.381 0.00 0.00 43.16 2.87
3682 6075 9.535878 GTAATATATATGCAGTAGGAGCCTTTC 57.464 37.037 0.00 0.00 0.00 2.62
3683 6076 9.273137 AGTAATATATATGCAGTAGGAGCCTTT 57.727 33.333 0.00 0.00 0.00 3.11
3684 6077 8.846423 AGTAATATATATGCAGTAGGAGCCTT 57.154 34.615 0.00 0.00 0.00 4.35
3685 6078 9.937876 TTAGTAATATATATGCAGTAGGAGCCT 57.062 33.333 0.00 0.00 0.00 4.58
3696 6089 9.614792 CCCCTGAGGTTTTAGTAATATATATGC 57.385 37.037 0.00 0.00 0.00 3.14
3698 6091 9.869574 ACCCCCTGAGGTTTTAGTAATATATAT 57.130 33.333 0.00 0.00 36.44 0.86
3700 6093 9.109246 GTACCCCCTGAGGTTTTAGTAATATAT 57.891 37.037 0.00 0.00 41.58 0.86
3701 6094 8.073107 TGTACCCCCTGAGGTTTTAGTAATATA 58.927 37.037 0.00 0.00 41.58 0.86
3702 6095 6.910290 TGTACCCCCTGAGGTTTTAGTAATAT 59.090 38.462 0.00 0.00 41.58 1.28
3703 6096 6.270755 TGTACCCCCTGAGGTTTTAGTAATA 58.729 40.000 0.00 0.00 41.58 0.98
3704 6097 5.102967 TGTACCCCCTGAGGTTTTAGTAAT 58.897 41.667 0.00 0.00 41.58 1.89
3705 6098 4.501433 TGTACCCCCTGAGGTTTTAGTAA 58.499 43.478 0.00 0.00 41.58 2.24
3706 6099 4.144825 TGTACCCCCTGAGGTTTTAGTA 57.855 45.455 0.00 0.00 41.58 1.82
3707 6100 2.994355 TGTACCCCCTGAGGTTTTAGT 58.006 47.619 0.00 0.00 41.58 2.24
3708 6101 4.586306 ATTGTACCCCCTGAGGTTTTAG 57.414 45.455 0.00 0.00 41.58 1.85
3709 6102 5.312708 TGTAATTGTACCCCCTGAGGTTTTA 59.687 40.000 0.00 0.00 41.58 1.52
3710 6103 3.915346 AATTGTACCCCCTGAGGTTTT 57.085 42.857 0.00 0.00 41.58 2.43
3711 6104 3.658705 TGTAATTGTACCCCCTGAGGTTT 59.341 43.478 0.00 0.00 41.58 3.27
3712 6105 3.261962 TGTAATTGTACCCCCTGAGGTT 58.738 45.455 0.00 0.00 41.58 3.50
3713 6106 2.923908 TGTAATTGTACCCCCTGAGGT 58.076 47.619 0.00 0.00 44.37 3.85
3714 6107 3.202151 ACATGTAATTGTACCCCCTGAGG 59.798 47.826 0.00 0.00 0.00 3.86
3715 6108 4.199310 CACATGTAATTGTACCCCCTGAG 58.801 47.826 0.00 0.00 0.00 3.35
3716 6109 3.589735 ACACATGTAATTGTACCCCCTGA 59.410 43.478 0.00 0.00 0.00 3.86
3717 6110 3.694072 CACACATGTAATTGTACCCCCTG 59.306 47.826 0.00 0.00 0.00 4.45
3718 6111 3.589735 TCACACATGTAATTGTACCCCCT 59.410 43.478 0.00 0.00 0.00 4.79
3719 6112 3.958018 TCACACATGTAATTGTACCCCC 58.042 45.455 0.00 0.00 0.00 5.40
3720 6113 6.524101 AAATCACACATGTAATTGTACCCC 57.476 37.500 0.00 0.00 0.00 4.95
3721 6114 8.046294 TGTAAATCACACATGTAATTGTACCC 57.954 34.615 0.00 0.00 30.04 3.69
3733 6126 5.593909 CCACCCATGTATGTAAATCACACAT 59.406 40.000 0.00 0.00 43.86 3.21
3734 6127 4.946772 CCACCCATGTATGTAAATCACACA 59.053 41.667 0.00 0.00 40.86 3.72
3735 6128 4.947388 ACCACCCATGTATGTAAATCACAC 59.053 41.667 0.00 0.00 40.86 3.82
3736 6129 5.186256 ACCACCCATGTATGTAAATCACA 57.814 39.130 0.00 0.00 42.69 3.58
3737 6130 5.417580 ACAACCACCCATGTATGTAAATCAC 59.582 40.000 0.00 0.00 0.00 3.06
3738 6131 5.417266 CACAACCACCCATGTATGTAAATCA 59.583 40.000 0.00 0.00 0.00 2.57
3739 6132 5.163561 CCACAACCACCCATGTATGTAAATC 60.164 44.000 0.00 0.00 0.00 2.17
3740 6133 4.709397 CCACAACCACCCATGTATGTAAAT 59.291 41.667 0.00 0.00 0.00 1.40
3741 6134 4.082845 CCACAACCACCCATGTATGTAAA 58.917 43.478 0.00 0.00 0.00 2.01
3742 6135 3.691575 CCACAACCACCCATGTATGTAA 58.308 45.455 0.00 0.00 0.00 2.41
3743 6136 2.619332 GCCACAACCACCCATGTATGTA 60.619 50.000 0.00 0.00 0.00 2.29
3744 6137 1.890573 GCCACAACCACCCATGTATGT 60.891 52.381 0.00 0.00 0.00 2.29
3745 6138 0.817013 GCCACAACCACCCATGTATG 59.183 55.000 0.00 0.00 0.00 2.39
3746 6139 0.407528 TGCCACAACCACCCATGTAT 59.592 50.000 0.00 0.00 0.00 2.29
3747 6140 0.538516 GTGCCACAACCACCCATGTA 60.539 55.000 0.00 0.00 0.00 2.29
3748 6141 1.832167 GTGCCACAACCACCCATGT 60.832 57.895 0.00 0.00 0.00 3.21
3749 6142 2.573083 GGTGCCACAACCACCCATG 61.573 63.158 0.00 0.00 45.51 3.66
3750 6143 2.203625 GGTGCCACAACCACCCAT 60.204 61.111 0.00 0.00 45.51 4.00
3773 6166 1.631898 TCTTGTAAACTAGGGTGCCCC 59.368 52.381 3.17 2.16 45.90 5.80
3774 6167 2.039348 TGTCTTGTAAACTAGGGTGCCC 59.961 50.000 0.00 0.00 0.00 5.36
3775 6168 3.072211 GTGTCTTGTAAACTAGGGTGCC 58.928 50.000 0.00 0.00 0.00 5.01
3776 6169 3.072211 GGTGTCTTGTAAACTAGGGTGC 58.928 50.000 0.00 0.00 0.00 5.01
3777 6170 4.618920 AGGTGTCTTGTAAACTAGGGTG 57.381 45.455 0.00 0.00 0.00 4.61
3778 6171 5.245526 CAGTAGGTGTCTTGTAAACTAGGGT 59.754 44.000 0.00 0.00 0.00 4.34
3779 6172 5.245526 ACAGTAGGTGTCTTGTAAACTAGGG 59.754 44.000 0.00 0.00 31.90 3.53
3780 6173 6.342338 ACAGTAGGTGTCTTGTAAACTAGG 57.658 41.667 0.00 0.00 31.90 3.02
3781 6174 7.974501 CCATACAGTAGGTGTCTTGTAAACTAG 59.025 40.741 0.00 0.00 40.94 2.57
3782 6175 7.670979 TCCATACAGTAGGTGTCTTGTAAACTA 59.329 37.037 0.00 0.00 40.94 2.24
3783 6176 6.495872 TCCATACAGTAGGTGTCTTGTAAACT 59.504 38.462 0.00 0.00 40.94 2.66
3784 6177 6.589139 GTCCATACAGTAGGTGTCTTGTAAAC 59.411 42.308 0.00 0.00 40.94 2.01
3785 6178 6.295462 GGTCCATACAGTAGGTGTCTTGTAAA 60.295 42.308 0.00 0.00 40.94 2.01
3786 6179 5.186409 GGTCCATACAGTAGGTGTCTTGTAA 59.814 44.000 0.00 0.00 40.94 2.41
3787 6180 4.708421 GGTCCATACAGTAGGTGTCTTGTA 59.292 45.833 0.00 0.00 40.94 2.41
3788 6181 3.514309 GGTCCATACAGTAGGTGTCTTGT 59.486 47.826 0.00 0.00 40.94 3.16
3789 6182 3.118738 GGGTCCATACAGTAGGTGTCTTG 60.119 52.174 0.00 0.00 40.94 3.02
3790 6183 3.105283 GGGTCCATACAGTAGGTGTCTT 58.895 50.000 0.00 0.00 40.94 3.01
3791 6184 2.043939 TGGGTCCATACAGTAGGTGTCT 59.956 50.000 0.00 0.00 40.94 3.41
3792 6185 2.463752 TGGGTCCATACAGTAGGTGTC 58.536 52.381 0.00 0.00 40.94 3.67
3793 6186 2.634639 TGGGTCCATACAGTAGGTGT 57.365 50.000 0.00 0.00 43.86 4.16
3794 6187 2.838202 ACTTGGGTCCATACAGTAGGTG 59.162 50.000 0.00 0.00 0.00 4.00
3795 6188 3.200958 ACTTGGGTCCATACAGTAGGT 57.799 47.619 0.00 0.00 0.00 3.08
3796 6189 4.040461 CCATACTTGGGTCCATACAGTAGG 59.960 50.000 6.31 5.90 39.56 3.18
3797 6190 4.503296 GCCATACTTGGGTCCATACAGTAG 60.503 50.000 6.31 0.00 43.84 2.57
3798 6191 3.389983 GCCATACTTGGGTCCATACAGTA 59.610 47.826 3.40 3.40 43.84 2.74
3799 6192 2.172717 GCCATACTTGGGTCCATACAGT 59.827 50.000 0.00 0.00 43.84 3.55
3800 6193 2.172505 TGCCATACTTGGGTCCATACAG 59.827 50.000 0.00 0.00 43.84 2.74
3801 6194 2.172505 CTGCCATACTTGGGTCCATACA 59.827 50.000 0.00 0.00 43.84 2.29
3802 6195 2.438021 TCTGCCATACTTGGGTCCATAC 59.562 50.000 0.00 0.00 43.84 2.39
3803 6196 2.770447 TCTGCCATACTTGGGTCCATA 58.230 47.619 0.00 0.00 43.84 2.74
3804 6197 1.595311 TCTGCCATACTTGGGTCCAT 58.405 50.000 0.00 0.00 43.84 3.41
3805 6198 1.595311 ATCTGCCATACTTGGGTCCA 58.405 50.000 0.00 0.00 43.84 4.02
3806 6199 2.438021 TGTATCTGCCATACTTGGGTCC 59.562 50.000 4.92 0.00 43.84 4.46
3807 6200 3.838244 TGTATCTGCCATACTTGGGTC 57.162 47.619 4.92 0.00 43.84 4.46
3808 6201 4.796110 ATTGTATCTGCCATACTTGGGT 57.204 40.909 4.92 0.00 43.84 4.51
3809 6202 6.240894 ACATATTGTATCTGCCATACTTGGG 58.759 40.000 4.92 0.00 43.84 4.12
3810 6203 7.587629 CAACATATTGTATCTGCCATACTTGG 58.412 38.462 4.92 0.00 46.66 3.61
3825 6218 7.147742 AGTGAAACCTTCCAAACAACATATTGT 60.148 33.333 0.00 0.00 45.38 2.71
3826 6219 7.209475 AGTGAAACCTTCCAAACAACATATTG 58.791 34.615 0.00 0.00 38.86 1.90
3827 6220 7.287696 AGAGTGAAACCTTCCAAACAACATATT 59.712 33.333 0.00 0.00 37.80 1.28
3828 6221 6.777580 AGAGTGAAACCTTCCAAACAACATAT 59.222 34.615 0.00 0.00 37.80 1.78
3829 6222 6.126409 AGAGTGAAACCTTCCAAACAACATA 58.874 36.000 0.00 0.00 37.80 2.29
3830 6223 4.956075 AGAGTGAAACCTTCCAAACAACAT 59.044 37.500 0.00 0.00 37.80 2.71
3831 6224 4.340617 AGAGTGAAACCTTCCAAACAACA 58.659 39.130 0.00 0.00 37.80 3.33
3832 6225 4.983671 AGAGTGAAACCTTCCAAACAAC 57.016 40.909 0.00 0.00 37.80 3.32
3833 6226 8.383175 AGATATAGAGTGAAACCTTCCAAACAA 58.617 33.333 0.00 0.00 37.80 2.83
3834 6227 7.918076 AGATATAGAGTGAAACCTTCCAAACA 58.082 34.615 0.00 0.00 37.80 2.83
3835 6228 9.886132 TTAGATATAGAGTGAAACCTTCCAAAC 57.114 33.333 0.00 0.00 37.80 2.93
3837 6230 9.488762 TCTTAGATATAGAGTGAAACCTTCCAA 57.511 33.333 0.00 0.00 37.80 3.53
3838 6231 9.661954 ATCTTAGATATAGAGTGAAACCTTCCA 57.338 33.333 0.00 0.00 37.80 3.53
3854 6247 9.965902 AAGTTGGACTTTGACAATCTTAGATAT 57.034 29.630 0.00 0.00 34.11 1.63
3856 6249 9.793259 TTAAGTTGGACTTTGACAATCTTAGAT 57.207 29.630 0.00 0.00 39.51 1.98
3857 6250 9.621629 TTTAAGTTGGACTTTGACAATCTTAGA 57.378 29.630 0.00 0.00 39.51 2.10
3858 6251 9.665264 GTTTAAGTTGGACTTTGACAATCTTAG 57.335 33.333 0.00 0.00 39.51 2.18
3859 6252 8.626526 GGTTTAAGTTGGACTTTGACAATCTTA 58.373 33.333 0.00 0.00 39.51 2.10
3860 6253 7.342026 AGGTTTAAGTTGGACTTTGACAATCTT 59.658 33.333 0.00 0.00 39.51 2.40
3861 6254 6.833933 AGGTTTAAGTTGGACTTTGACAATCT 59.166 34.615 0.00 0.00 39.51 2.40
3862 6255 7.013369 AGAGGTTTAAGTTGGACTTTGACAATC 59.987 37.037 0.00 2.31 39.51 2.67
3863 6256 6.833933 AGAGGTTTAAGTTGGACTTTGACAAT 59.166 34.615 0.00 0.00 39.51 2.71
3864 6257 6.094881 CAGAGGTTTAAGTTGGACTTTGACAA 59.905 38.462 0.00 0.00 39.51 3.18
3865 6258 5.588648 CAGAGGTTTAAGTTGGACTTTGACA 59.411 40.000 0.00 0.00 39.51 3.58
3866 6259 5.589050 ACAGAGGTTTAAGTTGGACTTTGAC 59.411 40.000 0.00 0.00 39.51 3.18
3867 6260 5.751586 ACAGAGGTTTAAGTTGGACTTTGA 58.248 37.500 0.00 0.00 39.51 2.69
3868 6261 6.451064 AACAGAGGTTTAAGTTGGACTTTG 57.549 37.500 0.00 0.00 39.51 2.77
3869 6262 6.096423 GGAAACAGAGGTTTAAGTTGGACTTT 59.904 38.462 0.00 0.00 46.84 2.66
3870 6263 5.593095 GGAAACAGAGGTTTAAGTTGGACTT 59.407 40.000 0.00 0.00 46.84 3.01
3871 6264 5.131067 GGAAACAGAGGTTTAAGTTGGACT 58.869 41.667 0.00 0.00 46.84 3.85
3872 6265 4.885325 TGGAAACAGAGGTTTAAGTTGGAC 59.115 41.667 0.00 0.00 46.84 4.02
3873 6266 5.118729 TGGAAACAGAGGTTTAAGTTGGA 57.881 39.130 0.00 0.00 46.84 3.53
3888 6281 2.727123 TCAGTTGCTTCCTGGAAACA 57.273 45.000 10.86 9.58 39.59 2.83
3889 6282 2.229784 CCATCAGTTGCTTCCTGGAAAC 59.770 50.000 10.86 6.74 0.00 2.78
3890 6283 2.517959 CCATCAGTTGCTTCCTGGAAA 58.482 47.619 10.86 0.00 0.00 3.13
3891 6284 1.887956 GCCATCAGTTGCTTCCTGGAA 60.888 52.381 9.14 9.14 0.00 3.53
3892 6285 0.322816 GCCATCAGTTGCTTCCTGGA 60.323 55.000 0.00 0.00 0.00 3.86
3893 6286 0.323178 AGCCATCAGTTGCTTCCTGG 60.323 55.000 0.00 0.00 32.94 4.45
3894 6287 1.542492 AAGCCATCAGTTGCTTCCTG 58.458 50.000 0.00 0.00 44.12 3.86
3895 6288 3.439857 TTAAGCCATCAGTTGCTTCCT 57.560 42.857 0.00 0.00 44.12 3.36
3896 6289 4.725790 AATTAAGCCATCAGTTGCTTCC 57.274 40.909 0.00 0.00 44.12 3.46
3897 6290 5.578336 GGAAAATTAAGCCATCAGTTGCTTC 59.422 40.000 0.00 0.00 44.12 3.86
3899 6292 4.774200 AGGAAAATTAAGCCATCAGTTGCT 59.226 37.500 0.00 0.00 40.17 3.91
3900 6293 5.077134 AGGAAAATTAAGCCATCAGTTGC 57.923 39.130 0.00 0.00 0.00 4.17
3901 6294 8.306761 ACTTTAGGAAAATTAAGCCATCAGTTG 58.693 33.333 0.00 0.00 0.00 3.16
3902 6295 8.306761 CACTTTAGGAAAATTAAGCCATCAGTT 58.693 33.333 0.00 0.00 0.00 3.16
3903 6296 7.093771 CCACTTTAGGAAAATTAAGCCATCAGT 60.094 37.037 0.00 0.00 0.00 3.41
3904 6297 7.093771 ACCACTTTAGGAAAATTAAGCCATCAG 60.094 37.037 0.00 0.00 0.00 2.90
3905 6298 6.723977 ACCACTTTAGGAAAATTAAGCCATCA 59.276 34.615 0.00 0.00 0.00 3.07
3906 6299 7.035612 CACCACTTTAGGAAAATTAAGCCATC 58.964 38.462 0.00 0.00 0.00 3.51
3907 6300 6.070824 CCACCACTTTAGGAAAATTAAGCCAT 60.071 38.462 0.00 0.00 0.00 4.40
3908 6301 5.245075 CCACCACTTTAGGAAAATTAAGCCA 59.755 40.000 0.00 0.00 0.00 4.75
3909 6302 5.245301 ACCACCACTTTAGGAAAATTAAGCC 59.755 40.000 0.00 0.00 0.00 4.35
3910 6303 6.340962 ACCACCACTTTAGGAAAATTAAGC 57.659 37.500 0.00 0.00 0.00 3.09
3911 6304 7.722363 ACAACCACCACTTTAGGAAAATTAAG 58.278 34.615 0.00 0.00 0.00 1.85
3912 6305 7.663043 ACAACCACCACTTTAGGAAAATTAA 57.337 32.000 0.00 0.00 0.00 1.40
3913 6306 7.663043 AACAACCACCACTTTAGGAAAATTA 57.337 32.000 0.00 0.00 0.00 1.40
3914 6307 6.553953 AACAACCACCACTTTAGGAAAATT 57.446 33.333 0.00 0.00 0.00 1.82
3915 6308 6.382859 AGAAACAACCACCACTTTAGGAAAAT 59.617 34.615 0.00 0.00 0.00 1.82
3916 6309 5.717654 AGAAACAACCACCACTTTAGGAAAA 59.282 36.000 0.00 0.00 0.00 2.29
3917 6310 5.265989 AGAAACAACCACCACTTTAGGAAA 58.734 37.500 0.00 0.00 0.00 3.13
3918 6311 4.862371 AGAAACAACCACCACTTTAGGAA 58.138 39.130 0.00 0.00 0.00 3.36
3919 6312 4.513406 AGAAACAACCACCACTTTAGGA 57.487 40.909 0.00 0.00 0.00 2.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.