Multiple sequence alignment - TraesCS4B01G249200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G249200 chr4B 100.000 6557 0 0 1 6557 515058495 515051939 0.000000e+00 12109.0
1 TraesCS4B01G249200 chr4D 93.776 3117 108 34 2825 5912 418572345 418569286 0.000000e+00 4602.0
2 TraesCS4B01G249200 chr4D 91.368 753 38 12 341 1090 418575108 418574380 0.000000e+00 1005.0
3 TraesCS4B01G249200 chr4D 91.678 709 37 6 1768 2457 418573498 418572793 0.000000e+00 963.0
4 TraesCS4B01G249200 chr4D 85.222 609 36 18 1129 1697 418574084 418573490 1.590000e-160 577.0
5 TraesCS4B01G249200 chr4D 95.639 321 14 0 2455 2775 418572666 418572346 3.510000e-142 516.0
6 TraesCS4B01G249200 chr4D 91.818 220 16 2 1 218 418576226 418576007 8.260000e-79 305.0
7 TraesCS4B01G249200 chr4D 86.508 126 9 5 220 345 418575589 418575472 1.480000e-26 132.0
8 TraesCS4B01G249200 chr4A 92.985 2181 85 26 2454 4612 46279329 46281463 0.000000e+00 3118.0
9 TraesCS4B01G249200 chr4A 86.741 1893 123 53 627 2457 46277199 46279025 0.000000e+00 1988.0
10 TraesCS4B01G249200 chr4A 93.444 1205 47 13 4613 5805 46281496 46282680 0.000000e+00 1759.0
11 TraesCS4B01G249200 chr4A 89.362 376 21 9 6189 6557 46282847 46283210 7.750000e-124 455.0
12 TraesCS4B01G249200 chr4A 94.915 59 3 0 6094 6152 46282781 46282839 7.000000e-15 93.5
13 TraesCS4B01G249200 chr5B 100.000 35 0 0 996 1030 325636962 325636996 1.530000e-06 65.8
14 TraesCS4B01G249200 chr3B 100.000 35 0 0 996 1030 170070060 170070026 1.530000e-06 65.8
15 TraesCS4B01G249200 chr2B 100.000 35 0 0 996 1030 22854819 22854853 1.530000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G249200 chr4B 515051939 515058495 6556 True 12109.000000 12109 100.000000 1 6557 1 chr4B.!!$R1 6556
1 TraesCS4B01G249200 chr4D 418569286 418576226 6940 True 1157.142857 4602 90.858429 1 5912 7 chr4D.!!$R1 5911
2 TraesCS4B01G249200 chr4A 46277199 46283210 6011 False 1482.700000 3118 91.489400 627 6557 5 chr4A.!!$F1 5930

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
277 696 0.690192 TCAGCTGGGATTTTCGGACA 59.310 50.0 15.13 0.0 0.00 4.02 F
2093 3200 0.321210 TGTCCCATAACTGCCACACG 60.321 55.0 0.00 0.0 0.00 4.49 F
2235 3344 0.601311 GAAGACGCCACTCTGCTGTT 60.601 55.0 0.00 0.0 0.00 3.16 F
2236 3345 0.882042 AAGACGCCACTCTGCTGTTG 60.882 55.0 0.00 0.0 0.00 3.33 F
2465 3952 0.947244 GCACAAGGGCTTGATATCGG 59.053 55.0 0.00 0.0 42.93 4.18 F
4207 5716 1.048601 TGAGTTTCCTGTTCTCCGCT 58.951 50.0 0.00 0.0 0.00 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2234 3343 0.690192 TTCGAAGGTCTGGGCATCAA 59.310 50.000 0.00 0.0 0.00 2.57 R
2963 4450 1.472480 CCAGCACGGGTTTTGGATAAG 59.528 52.381 0.00 0.0 32.34 1.73 R
3254 4745 3.133901 TCAAGCCGCCATTACTGAGAATA 59.866 43.478 0.00 0.0 0.00 1.75 R
3763 5259 3.611986 TGCTTGAAAACAAGTCTTTTGCG 59.388 39.130 10.82 0.0 34.81 4.85 R
4238 5747 2.033602 AACGTACCTTGCCTGGCC 59.966 61.111 17.53 0.0 0.00 5.36 R
6044 7602 0.034337 TCAGAGGCGGTACCAAACAC 59.966 55.000 13.54 0.0 43.14 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 8.498054 AGATGACCATACAAAACTACAAGATG 57.502 34.615 0.00 0.00 0.00 2.90
29 30 8.321353 AGATGACCATACAAAACTACAAGATGA 58.679 33.333 0.00 0.00 0.00 2.92
75 77 9.691362 ATCCTATTGTTAATTCACAAAACACAC 57.309 29.630 9.15 0.00 40.07 3.82
88 90 4.994217 ACAAAACACACCCAAGAGTTTTTG 59.006 37.500 0.00 0.00 40.89 2.44
128 131 6.424812 GCTGGTTACAATTTTCAAAGCATTCT 59.575 34.615 0.00 0.00 0.00 2.40
135 138 8.169977 ACAATTTTCAAAGCATTCTAGAGACA 57.830 30.769 0.00 0.00 0.00 3.41
173 176 4.631377 TCAGATGAAACGGTAAGAGCAATG 59.369 41.667 0.00 0.00 0.00 2.82
174 177 3.941483 AGATGAAACGGTAAGAGCAATGG 59.059 43.478 0.00 0.00 0.00 3.16
240 659 4.229876 GCATACTCTTTTCAGTTGTTGCC 58.770 43.478 0.00 0.00 0.00 4.52
261 680 3.181530 CCGCGTAAAAGAAGTGTGATCAG 60.182 47.826 4.92 0.00 0.00 2.90
262 681 3.722082 CGCGTAAAAGAAGTGTGATCAGC 60.722 47.826 0.00 0.00 0.00 4.26
263 682 3.433615 GCGTAAAAGAAGTGTGATCAGCT 59.566 43.478 0.00 0.00 0.00 4.24
264 683 4.667668 GCGTAAAAGAAGTGTGATCAGCTG 60.668 45.833 7.63 7.63 0.00 4.24
265 684 4.143030 CGTAAAAGAAGTGTGATCAGCTGG 60.143 45.833 15.13 0.00 0.00 4.85
267 686 1.649321 AGAAGTGTGATCAGCTGGGA 58.351 50.000 15.13 0.00 0.00 4.37
268 687 2.194859 AGAAGTGTGATCAGCTGGGAT 58.805 47.619 15.13 0.00 0.00 3.85
269 688 2.575279 AGAAGTGTGATCAGCTGGGATT 59.425 45.455 15.13 0.00 0.00 3.01
270 689 3.009916 AGAAGTGTGATCAGCTGGGATTT 59.990 43.478 15.13 0.00 0.00 2.17
271 690 3.446442 AGTGTGATCAGCTGGGATTTT 57.554 42.857 15.13 0.00 0.00 1.82
272 691 3.350833 AGTGTGATCAGCTGGGATTTTC 58.649 45.455 15.13 2.68 0.00 2.29
273 692 2.096496 GTGTGATCAGCTGGGATTTTCG 59.904 50.000 15.13 0.00 0.00 3.46
274 693 1.672881 GTGATCAGCTGGGATTTTCGG 59.327 52.381 15.13 0.00 0.00 4.30
275 694 1.559219 TGATCAGCTGGGATTTTCGGA 59.441 47.619 15.13 0.00 0.00 4.55
276 695 1.943340 GATCAGCTGGGATTTTCGGAC 59.057 52.381 15.13 0.00 0.00 4.79
277 696 0.690192 TCAGCTGGGATTTTCGGACA 59.310 50.000 15.13 0.00 0.00 4.02
278 697 0.804989 CAGCTGGGATTTTCGGACAC 59.195 55.000 5.57 0.00 0.00 3.67
312 731 4.381185 GCAATTGCAAATGACAGATCAGGA 60.381 41.667 25.36 0.00 38.57 3.86
316 735 4.196971 TGCAAATGACAGATCAGGATCAG 58.803 43.478 11.55 6.14 38.57 2.90
326 745 2.252535 TCAGGATCAGTCACCATGGA 57.747 50.000 21.47 0.00 0.00 3.41
328 747 1.836166 CAGGATCAGTCACCATGGAGT 59.164 52.381 21.47 0.00 0.00 3.85
333 752 5.014123 AGGATCAGTCACCATGGAGTTTTTA 59.986 40.000 21.47 0.00 0.00 1.52
373 1160 4.195334 ATGGGCTCCCGATGGCAC 62.195 66.667 0.00 0.00 39.42 5.01
404 1191 2.949447 AGTTGCAACATGGTTCCTCTT 58.051 42.857 30.11 3.00 0.00 2.85
435 1222 1.882352 CGTCAGCTGGTAAAAAGGCCT 60.882 52.381 15.13 0.00 0.00 5.19
470 1257 1.281867 TGGAGAAAACATCGATGCCCT 59.718 47.619 25.11 15.71 0.00 5.19
479 1266 5.722021 AACATCGATGCCCTTAAAAGTTT 57.278 34.783 25.11 4.57 0.00 2.66
484 1271 6.636562 TCGATGCCCTTAAAAGTTTTTGTA 57.363 33.333 6.10 0.00 0.00 2.41
488 1275 5.361427 TGCCCTTAAAAGTTTTTGTAAGCC 58.639 37.500 6.10 0.19 34.19 4.35
489 1276 5.104900 TGCCCTTAAAAGTTTTTGTAAGCCA 60.105 36.000 6.10 2.48 34.19 4.75
492 1279 7.012894 GCCCTTAAAAGTTTTTGTAAGCCAATT 59.987 33.333 6.10 0.00 34.19 2.32
516 1303 2.622064 ACCGGATGAATTAGCCAGAC 57.378 50.000 9.46 0.00 33.22 3.51
540 1327 6.314896 ACAATCCTTTAGCTCGAAATCTTCTG 59.685 38.462 0.00 0.00 0.00 3.02
562 1349 3.562176 GGTTCTTGGGATGTTGTGATCCT 60.562 47.826 0.00 0.00 41.67 3.24
566 1353 3.071874 TGGGATGTTGTGATCCTTGAC 57.928 47.619 0.00 0.00 41.67 3.18
574 1361 7.756722 GGATGTTGTGATCCTTGACTTTATTTG 59.243 37.037 0.00 0.00 39.20 2.32
575 1362 7.581213 TGTTGTGATCCTTGACTTTATTTGT 57.419 32.000 0.00 0.00 0.00 2.83
584 1371 9.918630 ATCCTTGACTTTATTTGTCATCTTTTG 57.081 29.630 0.00 0.00 42.95 2.44
585 1372 9.130661 TCCTTGACTTTATTTGTCATCTTTTGA 57.869 29.630 0.00 0.00 42.95 2.69
689 1477 6.421485 AGAGGCAATCTTGTCTGTTCATAAT 58.579 36.000 1.02 0.00 44.40 1.28
692 1480 8.757982 AGGCAATCTTGTCTGTTCATAATAAT 57.242 30.769 0.00 0.00 42.44 1.28
693 1481 9.851686 AGGCAATCTTGTCTGTTCATAATAATA 57.148 29.630 0.00 0.00 42.44 0.98
748 1544 5.506483 CCACTGTCAGTCTCATAGATAACCG 60.506 48.000 1.37 0.00 0.00 4.44
933 1730 4.021981 CCCCTGAAACAAAATCTCTTCCAC 60.022 45.833 0.00 0.00 0.00 4.02
1102 1899 1.543871 GGGACGCCAAACTGAAGGTTA 60.544 52.381 0.00 0.00 37.12 2.85
1104 1901 2.418976 GGACGCCAAACTGAAGGTTATC 59.581 50.000 0.00 0.00 37.12 1.75
1105 1902 2.418976 GACGCCAAACTGAAGGTTATCC 59.581 50.000 0.00 0.00 37.12 2.59
1266 2329 6.183360 CCGTTTGATTAACTGGTTGAGTATCC 60.183 42.308 0.00 0.00 33.09 2.59
1268 2331 7.065803 CGTTTGATTAACTGGTTGAGTATCCAT 59.934 37.037 0.00 0.00 33.09 3.41
1377 2447 4.329801 GGAACTGTGTTGCTTTTCTTTTGG 59.670 41.667 0.00 0.00 0.00 3.28
1388 2458 5.757808 TGCTTTTCTTTTGGCTGAAATAACC 59.242 36.000 0.00 0.00 33.04 2.85
1406 2479 8.556213 AAATAACCTTTTAGCTGACACGATAA 57.444 30.769 0.00 0.00 0.00 1.75
1407 2480 8.556213 AATAACCTTTTAGCTGACACGATAAA 57.444 30.769 0.00 0.00 0.00 1.40
1408 2481 5.857822 ACCTTTTAGCTGACACGATAAAC 57.142 39.130 0.00 0.00 0.00 2.01
1409 2482 5.302360 ACCTTTTAGCTGACACGATAAACA 58.698 37.500 0.00 0.00 0.00 2.83
1410 2483 5.408604 ACCTTTTAGCTGACACGATAAACAG 59.591 40.000 0.00 0.00 0.00 3.16
1411 2484 5.637810 CCTTTTAGCTGACACGATAAACAGA 59.362 40.000 0.00 0.00 32.90 3.41
1412 2485 6.313905 CCTTTTAGCTGACACGATAAACAGAT 59.686 38.462 0.00 0.00 33.65 2.90
1413 2486 7.491372 CCTTTTAGCTGACACGATAAACAGATA 59.509 37.037 0.00 0.00 31.60 1.98
1414 2487 8.766000 TTTTAGCTGACACGATAAACAGATAA 57.234 30.769 0.00 0.00 38.71 1.75
1415 2488 7.987268 TTAGCTGACACGATAAACAGATAAG 57.013 36.000 0.00 0.00 36.69 1.73
1416 2489 4.806247 AGCTGACACGATAAACAGATAAGC 59.194 41.667 0.00 0.00 32.90 3.09
1417 2490 4.566759 GCTGACACGATAAACAGATAAGCA 59.433 41.667 0.00 0.00 32.90 3.91
1418 2491 5.235186 GCTGACACGATAAACAGATAAGCAT 59.765 40.000 0.00 0.00 32.90 3.79
1419 2492 6.238211 GCTGACACGATAAACAGATAAGCATT 60.238 38.462 0.00 0.00 32.90 3.56
1420 2493 7.609760 TGACACGATAAACAGATAAGCATTT 57.390 32.000 0.00 0.00 0.00 2.32
1427 2500 8.947940 CGATAAACAGATAAGCATTTAACTTGC 58.052 33.333 2.06 2.06 40.45 4.01
1438 2511 6.165577 AGCATTTAACTTGCCACCTTTAATG 58.834 36.000 6.06 0.00 41.06 1.90
1449 2522 5.072040 CCACCTTTAATGGCTGGTTTTAG 57.928 43.478 7.29 0.00 0.00 1.85
1450 2523 4.526650 CCACCTTTAATGGCTGGTTTTAGT 59.473 41.667 7.29 0.00 0.00 2.24
1451 2524 5.336451 CCACCTTTAATGGCTGGTTTTAGTC 60.336 44.000 7.29 0.00 0.00 2.59
1452 2525 5.242838 CACCTTTAATGGCTGGTTTTAGTCA 59.757 40.000 7.29 0.00 36.62 3.41
1496 2571 9.277783 CAACCTTAGGAAGATTATCATACTTGG 57.722 37.037 4.77 0.00 0.00 3.61
1518 2593 3.924686 GCACTCCAAAATTGAGCATTCTG 59.075 43.478 0.00 0.00 0.00 3.02
1536 2611 3.622630 TCTGGGAACTCTAGAGTACTGC 58.377 50.000 25.42 15.69 41.58 4.40
1554 2629 7.574607 AGTACTGCTAAAGGTATGCCTAAAAT 58.425 34.615 1.46 0.00 46.33 1.82
1555 2630 6.699575 ACTGCTAAAGGTATGCCTAAAATG 57.300 37.500 1.46 0.00 46.33 2.32
1556 2631 6.187682 ACTGCTAAAGGTATGCCTAAAATGT 58.812 36.000 1.46 0.00 46.33 2.71
1557 2632 7.343357 ACTGCTAAAGGTATGCCTAAAATGTA 58.657 34.615 1.46 0.00 46.33 2.29
1558 2633 7.282450 ACTGCTAAAGGTATGCCTAAAATGTAC 59.718 37.037 1.46 0.00 46.33 2.90
1559 2634 6.544564 TGCTAAAGGTATGCCTAAAATGTACC 59.455 38.462 1.46 0.00 46.33 3.34
1560 2635 6.016527 GCTAAAGGTATGCCTAAAATGTACCC 60.017 42.308 1.46 0.00 46.33 3.69
1606 2710 2.496070 AGCCTGCAACGATGTACTTCTA 59.504 45.455 7.13 0.00 0.00 2.10
1644 2748 8.635765 TTTAAATCAAAAGGCTATCTGACAGT 57.364 30.769 1.59 0.00 0.00 3.55
1722 2826 2.328473 GCTTGAAAGCGGATGAAAACC 58.672 47.619 0.00 0.00 42.88 3.27
1723 2827 2.288152 GCTTGAAAGCGGATGAAAACCA 60.288 45.455 0.00 0.00 42.88 3.67
1724 2828 3.798548 GCTTGAAAGCGGATGAAAACCAA 60.799 43.478 0.00 0.00 42.88 3.67
1725 2829 4.367450 CTTGAAAGCGGATGAAAACCAAA 58.633 39.130 0.00 0.00 0.00 3.28
1726 2830 4.392921 TGAAAGCGGATGAAAACCAAAA 57.607 36.364 0.00 0.00 0.00 2.44
1727 2831 4.954875 TGAAAGCGGATGAAAACCAAAAT 58.045 34.783 0.00 0.00 0.00 1.82
1728 2832 4.749099 TGAAAGCGGATGAAAACCAAAATG 59.251 37.500 0.00 0.00 0.00 2.32
1729 2833 4.599047 AAGCGGATGAAAACCAAAATGA 57.401 36.364 0.00 0.00 0.00 2.57
1730 2834 4.806640 AGCGGATGAAAACCAAAATGAT 57.193 36.364 0.00 0.00 0.00 2.45
1731 2835 4.497300 AGCGGATGAAAACCAAAATGATG 58.503 39.130 0.00 0.00 0.00 3.07
1732 2836 4.220382 AGCGGATGAAAACCAAAATGATGA 59.780 37.500 0.00 0.00 0.00 2.92
1733 2837 4.563976 GCGGATGAAAACCAAAATGATGAG 59.436 41.667 0.00 0.00 0.00 2.90
1734 2838 5.713025 CGGATGAAAACCAAAATGATGAGT 58.287 37.500 0.00 0.00 0.00 3.41
1735 2839 6.624861 GCGGATGAAAACCAAAATGATGAGTA 60.625 38.462 0.00 0.00 0.00 2.59
1736 2840 7.483307 CGGATGAAAACCAAAATGATGAGTAT 58.517 34.615 0.00 0.00 0.00 2.12
1737 2841 7.645340 CGGATGAAAACCAAAATGATGAGTATC 59.355 37.037 0.00 0.00 0.00 2.24
1738 2842 7.922811 GGATGAAAACCAAAATGATGAGTATCC 59.077 37.037 0.00 0.00 32.09 2.59
1739 2843 8.599624 ATGAAAACCAAAATGATGAGTATCCT 57.400 30.769 0.00 0.00 32.09 3.24
1740 2844 8.421249 TGAAAACCAAAATGATGAGTATCCTT 57.579 30.769 0.00 0.00 32.09 3.36
1741 2845 8.306038 TGAAAACCAAAATGATGAGTATCCTTG 58.694 33.333 0.00 0.00 32.09 3.61
1742 2846 8.421249 AAAACCAAAATGATGAGTATCCTTGA 57.579 30.769 0.00 0.00 32.09 3.02
1908 3012 4.563061 GCATTGATGGAAGCTTCTTTTGT 58.437 39.130 25.05 7.71 0.00 2.83
1909 3013 4.624452 GCATTGATGGAAGCTTCTTTTGTC 59.376 41.667 25.05 15.47 0.00 3.18
1939 3043 1.083242 GCCTGCTTCTCTGCTCGAAG 61.083 60.000 6.04 6.04 40.57 3.79
1981 3085 1.378778 AGGACCGAGAGCGCTTACT 60.379 57.895 13.26 4.37 35.83 2.24
1993 3097 1.466360 GCGCTTACTGCCAGTTGAATG 60.466 52.381 1.02 0.00 38.78 2.67
2000 3104 1.662629 CTGCCAGTTGAATGTAGCTCG 59.337 52.381 0.00 0.00 0.00 5.03
2032 3136 2.916934 AGGCAAACCTCCAGTATACCAA 59.083 45.455 0.00 0.00 46.34 3.67
2093 3200 0.321210 TGTCCCATAACTGCCACACG 60.321 55.000 0.00 0.00 0.00 4.49
2111 3218 4.072131 ACACGAATTGGTTTCTAGCACAT 58.928 39.130 0.00 0.00 31.73 3.21
2120 3227 3.270877 GTTTCTAGCACATAGGTGGGTG 58.729 50.000 9.91 0.00 45.38 4.61
2132 3239 1.210967 AGGTGGGTGAACAGTTTTCGA 59.789 47.619 0.00 0.00 0.00 3.71
2133 3240 2.158667 AGGTGGGTGAACAGTTTTCGAT 60.159 45.455 0.00 0.00 0.00 3.59
2134 3241 2.031157 GGTGGGTGAACAGTTTTCGATG 60.031 50.000 0.00 0.00 0.00 3.84
2135 3242 1.606668 TGGGTGAACAGTTTTCGATGC 59.393 47.619 0.00 0.00 0.00 3.91
2136 3243 1.606668 GGGTGAACAGTTTTCGATGCA 59.393 47.619 0.00 0.00 0.00 3.96
2196 3305 3.442996 GCGGTCTGCTGTCAGTATT 57.557 52.632 0.93 0.00 41.10 1.89
2234 3343 1.005630 GAAGACGCCACTCTGCTGT 60.006 57.895 0.00 0.00 0.00 4.40
2235 3344 0.601311 GAAGACGCCACTCTGCTGTT 60.601 55.000 0.00 0.00 0.00 3.16
2236 3345 0.882042 AAGACGCCACTCTGCTGTTG 60.882 55.000 0.00 0.00 0.00 3.33
2265 3374 3.259374 AGACCTTCGAAATCTCAGCTTCA 59.741 43.478 0.00 0.00 0.00 3.02
2287 3396 6.349300 TCACATTAAGCCTAGGAACTGAATC 58.651 40.000 14.75 0.00 41.52 2.52
2288 3397 5.529060 CACATTAAGCCTAGGAACTGAATCC 59.471 44.000 14.75 0.00 41.52 3.01
2297 3406 3.567478 GGAACTGAATCCTGTATGCCT 57.433 47.619 0.00 0.00 36.50 4.75
2305 3414 6.271857 ACTGAATCCTGTATGCCTAAGATGAT 59.728 38.462 0.00 0.00 0.00 2.45
2309 3418 4.020751 TCCTGTATGCCTAAGATGATGAGC 60.021 45.833 0.00 0.00 0.00 4.26
2311 3420 5.294734 TGTATGCCTAAGATGATGAGCAA 57.705 39.130 0.00 0.00 33.35 3.91
2363 3486 2.332063 CAGAAGGTGGTGTCTGTGTT 57.668 50.000 0.00 0.00 37.16 3.32
2428 3551 1.615392 GCAAGGAGCCAGAAAACACAT 59.385 47.619 0.00 0.00 37.23 3.21
2465 3952 0.947244 GCACAAGGGCTTGATATCGG 59.053 55.000 0.00 0.00 42.93 4.18
2512 3999 6.071952 CCATATGGTGCTTACTCAGTTGTTTT 60.072 38.462 14.09 0.00 0.00 2.43
2517 4004 5.505819 GGTGCTTACTCAGTTGTTTTTCCTC 60.506 44.000 0.00 0.00 0.00 3.71
2604 4091 4.098914 TGTCTACATGAAAAAGGGTGCT 57.901 40.909 0.00 0.00 0.00 4.40
2649 4136 3.117491 TGCACTTCTCTTCCAGAGTTG 57.883 47.619 0.75 0.00 42.83 3.16
2783 4270 6.385443 AGTTATCTCCATTCAGGGTGATAGA 58.615 40.000 3.31 0.00 41.70 1.98
2883 4370 5.518848 TTTCACTTCACAATGTGAGCAAT 57.481 34.783 16.10 0.98 43.69 3.56
2993 4480 3.100545 CCGTGCTGGGCAAGATTAT 57.899 52.632 6.99 0.00 41.47 1.28
3021 4508 4.530875 CATCTTACTTGGGCTGAATTCCT 58.469 43.478 2.27 0.00 0.00 3.36
3085 4572 9.299963 CTGTTTTCACATCTTTGATGTTTGTAA 57.700 29.630 10.11 0.00 30.39 2.41
3086 4573 9.814899 TGTTTTCACATCTTTGATGTTTGTAAT 57.185 25.926 10.11 0.00 0.00 1.89
3174 4664 5.126869 TGGTACCATTGTGAATATGCAAAGG 59.873 40.000 11.60 7.30 38.82 3.11
3203 4693 5.874895 AGCATTCTTAGTAAAAACCGTCC 57.125 39.130 0.00 0.00 0.00 4.79
3239 4730 3.501828 AGATGTGTATTTGCAAGCAACGA 59.498 39.130 7.03 0.00 35.46 3.85
3254 4745 5.200368 AGCAACGATTCTTCCATTTGTTT 57.800 34.783 0.00 0.00 0.00 2.83
3601 5097 9.769093 CCATTATTCTACTAACTTTTGTTTCCG 57.231 33.333 0.00 0.00 43.32 4.30
3706 5202 2.817844 GTGCCTACCTAAAAGTGTTGGG 59.182 50.000 0.00 0.00 0.00 4.12
3763 5259 3.560636 TGCCAAACTTAGCCTATCTCC 57.439 47.619 0.00 0.00 0.00 3.71
3920 5426 6.979465 TCAGTGTGCATTTCATCATTTTGTA 58.021 32.000 0.00 0.00 0.00 2.41
4164 5670 2.359848 GGTAAAACCCGCTTGTTTCTGT 59.640 45.455 1.57 0.00 37.46 3.41
4207 5716 1.048601 TGAGTTTCCTGTTCTCCGCT 58.951 50.000 0.00 0.00 0.00 5.52
4236 5745 1.287425 GCACTAGTAATCGTGGCCAC 58.713 55.000 26.78 26.78 0.00 5.01
4237 5746 1.134788 GCACTAGTAATCGTGGCCACT 60.135 52.381 32.28 17.44 0.00 4.00
4238 5747 2.540515 CACTAGTAATCGTGGCCACTG 58.459 52.381 32.28 24.55 0.00 3.66
4239 5748 1.480954 ACTAGTAATCGTGGCCACTGG 59.519 52.381 32.28 18.72 0.00 4.00
4293 5802 5.047802 AGCACAAGAAACATGGAAATGGTAG 60.048 40.000 0.00 0.00 0.00 3.18
4317 5826 6.260936 AGAGCTTCCATAATTTGTCAATACGG 59.739 38.462 0.00 0.00 0.00 4.02
4457 5967 1.228552 GGAGAAGGCAAGGCACCAA 60.229 57.895 0.00 0.00 0.00 3.67
4499 6009 5.789643 ACTAAATCAACATTTGGCACAGT 57.210 34.783 0.00 0.00 42.39 3.55
4539 6050 2.357009 GACATTTGGCGCAGAGATCATT 59.643 45.455 10.83 0.00 0.00 2.57
4582 6093 3.519107 TGAAAGTGGTATGGATCAGCTCA 59.481 43.478 0.00 0.00 0.00 4.26
4614 6157 3.201290 CTCTGGATGAATGAAGGAACCG 58.799 50.000 0.00 0.00 0.00 4.44
4792 6335 5.105997 GCTGTGAATGTTATCTTGCCTTCTT 60.106 40.000 0.00 0.00 0.00 2.52
4794 6337 5.098211 GTGAATGTTATCTTGCCTTCTTGC 58.902 41.667 0.00 0.00 0.00 4.01
4812 6355 2.422597 TGCCTACAAATGTTCAGGACG 58.577 47.619 6.56 0.00 0.00 4.79
4825 6368 4.624024 TGTTCAGGACGTTAAATGTCGATC 59.376 41.667 0.00 0.00 35.01 3.69
4954 6497 8.964420 AATAATTTACGGTTGTCAAATCACTG 57.036 30.769 0.00 0.00 0.00 3.66
5090 6633 1.891150 ACCTTGCTTGCCTCAAATCTG 59.109 47.619 0.00 0.00 0.00 2.90
5198 6742 7.663827 ACATATTGTCCATGCCATTATGAAAG 58.336 34.615 20.62 6.13 33.52 2.62
5358 6902 3.578282 TCAGCAAGTTAGTGACATGAGGA 59.422 43.478 0.00 0.00 0.00 3.71
5360 6904 2.668457 GCAAGTTAGTGACATGAGGACG 59.332 50.000 0.00 0.00 0.00 4.79
5362 6906 2.171840 AGTTAGTGACATGAGGACGCT 58.828 47.619 0.00 2.74 0.00 5.07
5460 7004 1.002888 CAGATGGATGGATTCGGGGAG 59.997 57.143 0.00 0.00 0.00 4.30
5649 7204 5.065218 CCCACAATCTGATTCGGTAAAGAAG 59.935 44.000 0.00 0.00 33.19 2.85
5699 7254 5.047731 TGAGTAGACTGTCTCTTTCATGTGG 60.048 44.000 14.62 0.00 0.00 4.17
5710 7265 5.716703 TCTCTTTCATGTGGATCTACAGTCA 59.283 40.000 17.42 1.09 33.44 3.41
5772 7327 6.431234 CCTACACCATCTTATTTCTATTGGCC 59.569 42.308 0.00 0.00 0.00 5.36
5815 7371 6.238953 GCAAGATTTGTCTGCAATCCTATGAT 60.239 38.462 0.00 0.00 34.18 2.45
5843 7401 5.803020 AGAAACATTTGTCTTCCTATCGC 57.197 39.130 0.00 0.00 0.00 4.58
5857 7415 2.359900 CTATCGCTGGCCTTTGAAGTT 58.640 47.619 3.32 0.00 0.00 2.66
5858 7416 1.168714 ATCGCTGGCCTTTGAAGTTC 58.831 50.000 3.32 0.00 0.00 3.01
5861 7419 0.600057 GCTGGCCTTTGAAGTTCTGG 59.400 55.000 3.32 5.26 0.00 3.86
5862 7420 1.986882 CTGGCCTTTGAAGTTCTGGT 58.013 50.000 3.32 0.00 0.00 4.00
5864 7422 3.690460 CTGGCCTTTGAAGTTCTGGTAT 58.310 45.455 3.32 0.00 0.00 2.73
5865 7423 4.843728 CTGGCCTTTGAAGTTCTGGTATA 58.156 43.478 3.32 0.00 0.00 1.47
5866 7424 4.843728 TGGCCTTTGAAGTTCTGGTATAG 58.156 43.478 3.32 0.00 0.00 1.31
5867 7425 4.288626 TGGCCTTTGAAGTTCTGGTATAGT 59.711 41.667 3.32 0.00 0.00 2.12
5869 7427 6.157994 TGGCCTTTGAAGTTCTGGTATAGTAT 59.842 38.462 3.32 0.00 0.00 2.12
5871 7429 7.226918 GGCCTTTGAAGTTCTGGTATAGTATTC 59.773 40.741 4.17 0.00 0.00 1.75
5876 7434 9.670442 TTGAAGTTCTGGTATAGTATTCCCTAT 57.330 33.333 4.17 0.00 0.00 2.57
5896 7454 4.630644 ATATGGGCAATGAGACAGTAGG 57.369 45.455 0.00 0.00 0.00 3.18
5897 7455 0.253044 TGGGCAATGAGACAGTAGGC 59.747 55.000 0.00 0.00 0.00 3.93
5907 7465 1.065854 AGACAGTAGGCCTGATTGCAC 60.066 52.381 17.99 3.82 44.49 4.57
5912 7470 1.945394 GTAGGCCTGATTGCACATGAG 59.055 52.381 17.99 0.00 0.00 2.90
5913 7471 0.622136 AGGCCTGATTGCACATGAGA 59.378 50.000 3.11 0.00 0.00 3.27
5914 7472 1.214673 AGGCCTGATTGCACATGAGAT 59.785 47.619 3.11 0.00 0.00 2.75
5915 7473 2.029623 GGCCTGATTGCACATGAGATT 58.970 47.619 0.00 0.00 0.00 2.40
5916 7474 2.223735 GGCCTGATTGCACATGAGATTG 60.224 50.000 0.00 0.00 0.00 2.67
5917 7475 2.798499 GCCTGATTGCACATGAGATTGC 60.798 50.000 0.00 0.00 39.33 3.56
5918 7476 2.688446 CCTGATTGCACATGAGATTGCT 59.312 45.455 0.00 0.00 39.62 3.91
5919 7477 3.489229 CCTGATTGCACATGAGATTGCTG 60.489 47.826 0.00 0.00 39.62 4.41
5920 7478 3.349022 TGATTGCACATGAGATTGCTGA 58.651 40.909 0.00 0.00 39.62 4.26
5921 7479 3.377172 TGATTGCACATGAGATTGCTGAG 59.623 43.478 0.00 0.00 39.62 3.35
5922 7480 2.484742 TGCACATGAGATTGCTGAGT 57.515 45.000 0.00 0.00 39.62 3.41
5923 7481 2.786777 TGCACATGAGATTGCTGAGTT 58.213 42.857 0.00 0.00 39.62 3.01
5924 7482 3.151554 TGCACATGAGATTGCTGAGTTT 58.848 40.909 0.00 0.00 39.62 2.66
5925 7483 4.325972 TGCACATGAGATTGCTGAGTTTA 58.674 39.130 0.00 0.00 39.62 2.01
5926 7484 4.945543 TGCACATGAGATTGCTGAGTTTAT 59.054 37.500 0.00 0.00 39.62 1.40
5927 7485 5.416639 TGCACATGAGATTGCTGAGTTTATT 59.583 36.000 0.00 0.00 39.62 1.40
5928 7486 6.071784 TGCACATGAGATTGCTGAGTTTATTT 60.072 34.615 0.00 0.00 39.62 1.40
5929 7487 6.810182 GCACATGAGATTGCTGAGTTTATTTT 59.190 34.615 0.00 0.00 35.74 1.82
5930 7488 7.008992 GCACATGAGATTGCTGAGTTTATTTTC 59.991 37.037 0.00 0.00 35.74 2.29
5931 7489 8.024865 CACATGAGATTGCTGAGTTTATTTTCA 58.975 33.333 0.00 0.00 0.00 2.69
5932 7490 8.242053 ACATGAGATTGCTGAGTTTATTTTCAG 58.758 33.333 0.00 0.00 42.87 3.02
5933 7491 7.750229 TGAGATTGCTGAGTTTATTTTCAGT 57.250 32.000 3.74 0.00 42.17 3.41
5934 7492 8.169977 TGAGATTGCTGAGTTTATTTTCAGTT 57.830 30.769 3.74 0.00 42.17 3.16
5935 7493 8.632679 TGAGATTGCTGAGTTTATTTTCAGTTT 58.367 29.630 3.74 0.00 42.17 2.66
5952 7510 9.936759 TTTTCAGTTTAAAATCTGTTGGTTTCT 57.063 25.926 5.90 0.00 33.89 2.52
5953 7511 9.936759 TTTCAGTTTAAAATCTGTTGGTTTCTT 57.063 25.926 5.90 0.00 33.89 2.52
5959 7517 9.685828 TTTAAAATCTGTTGGTTTCTTATTCGG 57.314 29.630 0.00 0.00 0.00 4.30
5960 7518 5.897377 AATCTGTTGGTTTCTTATTCGGG 57.103 39.130 0.00 0.00 0.00 5.14
5961 7519 4.360951 TCTGTTGGTTTCTTATTCGGGT 57.639 40.909 0.00 0.00 0.00 5.28
5962 7520 5.486735 TCTGTTGGTTTCTTATTCGGGTA 57.513 39.130 0.00 0.00 0.00 3.69
5963 7521 6.057321 TCTGTTGGTTTCTTATTCGGGTAT 57.943 37.500 0.00 0.00 0.00 2.73
5964 7522 5.878116 TCTGTTGGTTTCTTATTCGGGTATG 59.122 40.000 0.00 0.00 0.00 2.39
5965 7523 5.562635 TGTTGGTTTCTTATTCGGGTATGT 58.437 37.500 0.00 0.00 0.00 2.29
5966 7524 5.644636 TGTTGGTTTCTTATTCGGGTATGTC 59.355 40.000 0.00 0.00 0.00 3.06
5967 7525 4.773013 TGGTTTCTTATTCGGGTATGTCC 58.227 43.478 0.00 0.00 0.00 4.02
5976 7534 4.141144 GGTATGTCCCGCCATGTG 57.859 61.111 0.00 0.00 0.00 3.21
5977 7535 1.524961 GGTATGTCCCGCCATGTGA 59.475 57.895 0.00 0.00 0.00 3.58
5978 7536 0.814010 GGTATGTCCCGCCATGTGAC 60.814 60.000 0.00 0.00 0.00 3.67
5979 7537 0.178068 GTATGTCCCGCCATGTGACT 59.822 55.000 0.00 0.00 0.00 3.41
5980 7538 0.177836 TATGTCCCGCCATGTGACTG 59.822 55.000 0.00 0.00 0.00 3.51
5981 7539 3.127533 GTCCCGCCATGTGACTGC 61.128 66.667 0.00 0.00 0.00 4.40
5982 7540 4.408821 TCCCGCCATGTGACTGCC 62.409 66.667 0.00 0.00 0.00 4.85
5983 7541 4.415150 CCCGCCATGTGACTGCCT 62.415 66.667 0.00 0.00 0.00 4.75
5984 7542 3.129502 CCGCCATGTGACTGCCTG 61.130 66.667 0.00 0.00 0.00 4.85
5985 7543 2.359107 CGCCATGTGACTGCCTGT 60.359 61.111 0.00 0.00 0.00 4.00
5986 7544 1.079197 CGCCATGTGACTGCCTGTA 60.079 57.895 0.00 0.00 0.00 2.74
5987 7545 0.462581 CGCCATGTGACTGCCTGTAT 60.463 55.000 0.00 0.00 0.00 2.29
5988 7546 1.755179 GCCATGTGACTGCCTGTATT 58.245 50.000 0.00 0.00 0.00 1.89
5989 7547 1.402968 GCCATGTGACTGCCTGTATTG 59.597 52.381 0.00 0.00 0.00 1.90
5990 7548 1.402968 CCATGTGACTGCCTGTATTGC 59.597 52.381 0.00 0.00 0.00 3.56
5991 7549 1.063027 CATGTGACTGCCTGTATTGCG 59.937 52.381 0.00 0.00 0.00 4.85
5992 7550 0.673333 TGTGACTGCCTGTATTGCGG 60.673 55.000 0.00 0.00 40.98 5.69
5993 7551 0.391130 GTGACTGCCTGTATTGCGGA 60.391 55.000 0.00 0.00 38.49 5.54
5994 7552 0.541392 TGACTGCCTGTATTGCGGAT 59.459 50.000 0.00 0.00 38.49 4.18
5995 7553 0.940126 GACTGCCTGTATTGCGGATG 59.060 55.000 0.00 0.00 38.49 3.51
5996 7554 0.541392 ACTGCCTGTATTGCGGATGA 59.459 50.000 0.00 0.00 38.49 2.92
5997 7555 1.141657 ACTGCCTGTATTGCGGATGAT 59.858 47.619 0.00 0.00 38.49 2.45
5998 7556 2.224606 CTGCCTGTATTGCGGATGATT 58.775 47.619 0.00 0.00 37.27 2.57
5999 7557 3.181455 ACTGCCTGTATTGCGGATGATTA 60.181 43.478 0.00 0.00 38.49 1.75
6000 7558 4.005650 CTGCCTGTATTGCGGATGATTAT 58.994 43.478 0.00 0.00 37.27 1.28
6001 7559 5.159273 TGCCTGTATTGCGGATGATTATA 57.841 39.130 0.00 0.00 0.00 0.98
6002 7560 4.935205 TGCCTGTATTGCGGATGATTATAC 59.065 41.667 0.00 0.00 0.00 1.47
6003 7561 4.935205 GCCTGTATTGCGGATGATTATACA 59.065 41.667 0.00 0.00 32.51 2.29
6004 7562 5.411361 GCCTGTATTGCGGATGATTATACAA 59.589 40.000 0.99 0.00 32.94 2.41
6005 7563 6.072728 GCCTGTATTGCGGATGATTATACAAA 60.073 38.462 0.99 0.00 32.94 2.83
6006 7564 7.362056 GCCTGTATTGCGGATGATTATACAAAT 60.362 37.037 0.99 0.00 32.94 2.32
6007 7565 9.161629 CCTGTATTGCGGATGATTATACAAATA 57.838 33.333 0.99 0.00 32.94 1.40
6008 7566 9.973246 CTGTATTGCGGATGATTATACAAATAC 57.027 33.333 7.71 7.71 32.94 1.89
6009 7567 8.652463 TGTATTGCGGATGATTATACAAATACG 58.348 33.333 9.15 0.00 33.27 3.06
6010 7568 7.667043 ATTGCGGATGATTATACAAATACGT 57.333 32.000 0.00 0.00 0.00 3.57
6011 7569 7.485418 TTGCGGATGATTATACAAATACGTT 57.515 32.000 0.00 0.00 0.00 3.99
6012 7570 8.590719 TTGCGGATGATTATACAAATACGTTA 57.409 30.769 0.00 0.00 0.00 3.18
6013 7571 8.766000 TGCGGATGATTATACAAATACGTTAT 57.234 30.769 0.00 0.00 0.00 1.89
6014 7572 9.210329 TGCGGATGATTATACAAATACGTTATT 57.790 29.630 0.00 0.00 0.00 1.40
6032 7590 8.974060 ACGTTATTTCATTTCCTGTATATGGT 57.026 30.769 0.00 0.00 0.00 3.55
6033 7591 8.836413 ACGTTATTTCATTTCCTGTATATGGTG 58.164 33.333 0.00 0.00 0.00 4.17
6034 7592 8.289618 CGTTATTTCATTTCCTGTATATGGTGG 58.710 37.037 0.00 0.00 0.00 4.61
6035 7593 8.576442 GTTATTTCATTTCCTGTATATGGTGGG 58.424 37.037 0.00 0.00 0.00 4.61
6036 7594 4.722526 TCATTTCCTGTATATGGTGGGG 57.277 45.455 0.00 0.00 0.00 4.96
6037 7595 4.051478 TCATTTCCTGTATATGGTGGGGT 58.949 43.478 0.00 0.00 0.00 4.95
6038 7596 4.480537 TCATTTCCTGTATATGGTGGGGTT 59.519 41.667 0.00 0.00 0.00 4.11
6039 7597 3.943671 TTCCTGTATATGGTGGGGTTG 57.056 47.619 0.00 0.00 0.00 3.77
6040 7598 3.138123 TCCTGTATATGGTGGGGTTGA 57.862 47.619 0.00 0.00 0.00 3.18
6041 7599 3.465832 TCCTGTATATGGTGGGGTTGAA 58.534 45.455 0.00 0.00 0.00 2.69
6042 7600 3.853181 TCCTGTATATGGTGGGGTTGAAA 59.147 43.478 0.00 0.00 0.00 2.69
6043 7601 4.080015 TCCTGTATATGGTGGGGTTGAAAG 60.080 45.833 0.00 0.00 0.00 2.62
6044 7602 4.207165 CTGTATATGGTGGGGTTGAAAGG 58.793 47.826 0.00 0.00 0.00 3.11
6045 7603 3.594232 TGTATATGGTGGGGTTGAAAGGT 59.406 43.478 0.00 0.00 0.00 3.50
6046 7604 2.595750 TATGGTGGGGTTGAAAGGTG 57.404 50.000 0.00 0.00 0.00 4.00
6047 7605 0.560688 ATGGTGGGGTTGAAAGGTGT 59.439 50.000 0.00 0.00 0.00 4.16
6048 7606 0.336737 TGGTGGGGTTGAAAGGTGTT 59.663 50.000 0.00 0.00 0.00 3.32
6049 7607 1.273324 TGGTGGGGTTGAAAGGTGTTT 60.273 47.619 0.00 0.00 0.00 2.83
6050 7608 1.138069 GGTGGGGTTGAAAGGTGTTTG 59.862 52.381 0.00 0.00 0.00 2.93
6051 7609 1.138069 GTGGGGTTGAAAGGTGTTTGG 59.862 52.381 0.00 0.00 0.00 3.28
6052 7610 1.273324 TGGGGTTGAAAGGTGTTTGGT 60.273 47.619 0.00 0.00 0.00 3.67
6053 7611 2.024273 TGGGGTTGAAAGGTGTTTGGTA 60.024 45.455 0.00 0.00 0.00 3.25
6054 7612 2.363038 GGGGTTGAAAGGTGTTTGGTAC 59.637 50.000 0.00 0.00 0.00 3.34
6055 7613 2.363038 GGGTTGAAAGGTGTTTGGTACC 59.637 50.000 4.43 4.43 38.52 3.34
6056 7614 2.033675 GGTTGAAAGGTGTTTGGTACCG 59.966 50.000 7.57 0.00 43.06 4.02
6057 7615 1.310904 TGAAAGGTGTTTGGTACCGC 58.689 50.000 7.57 0.50 43.06 5.68
6058 7616 0.594602 GAAAGGTGTTTGGTACCGCC 59.405 55.000 7.57 4.42 43.06 6.13
6059 7617 0.184211 AAAGGTGTTTGGTACCGCCT 59.816 50.000 7.57 6.68 43.06 5.52
6060 7618 0.250597 AAGGTGTTTGGTACCGCCTC 60.251 55.000 7.57 0.00 43.06 4.70
6061 7619 1.125711 AGGTGTTTGGTACCGCCTCT 61.126 55.000 7.57 0.00 43.06 3.69
6062 7620 0.953960 GGTGTTTGGTACCGCCTCTG 60.954 60.000 7.57 0.00 38.35 3.35
6063 7621 0.034337 GTGTTTGGTACCGCCTCTGA 59.966 55.000 7.57 0.00 38.35 3.27
6064 7622 0.981183 TGTTTGGTACCGCCTCTGAT 59.019 50.000 7.57 0.00 38.35 2.90
6065 7623 1.338674 TGTTTGGTACCGCCTCTGATG 60.339 52.381 7.57 0.00 38.35 3.07
6066 7624 0.981183 TTTGGTACCGCCTCTGATGT 59.019 50.000 7.57 0.00 38.35 3.06
6067 7625 0.981183 TTGGTACCGCCTCTGATGTT 59.019 50.000 7.57 0.00 38.35 2.71
6068 7626 0.981183 TGGTACCGCCTCTGATGTTT 59.019 50.000 7.57 0.00 38.35 2.83
6069 7627 1.338674 TGGTACCGCCTCTGATGTTTG 60.339 52.381 7.57 0.00 38.35 2.93
6070 7628 1.066430 GGTACCGCCTCTGATGTTTGA 60.066 52.381 0.00 0.00 0.00 2.69
6071 7629 2.420129 GGTACCGCCTCTGATGTTTGAT 60.420 50.000 0.00 0.00 0.00 2.57
6072 7630 2.496899 ACCGCCTCTGATGTTTGATT 57.503 45.000 0.00 0.00 0.00 2.57
6073 7631 3.627395 ACCGCCTCTGATGTTTGATTA 57.373 42.857 0.00 0.00 0.00 1.75
6074 7632 4.156455 ACCGCCTCTGATGTTTGATTAT 57.844 40.909 0.00 0.00 0.00 1.28
6075 7633 3.879295 ACCGCCTCTGATGTTTGATTATG 59.121 43.478 0.00 0.00 0.00 1.90
6076 7634 3.304257 CCGCCTCTGATGTTTGATTATGC 60.304 47.826 0.00 0.00 0.00 3.14
6077 7635 3.304257 CGCCTCTGATGTTTGATTATGCC 60.304 47.826 0.00 0.00 0.00 4.40
6078 7636 3.005155 GCCTCTGATGTTTGATTATGCCC 59.995 47.826 0.00 0.00 0.00 5.36
6079 7637 4.467769 CCTCTGATGTTTGATTATGCCCT 58.532 43.478 0.00 0.00 0.00 5.19
6080 7638 4.891756 CCTCTGATGTTTGATTATGCCCTT 59.108 41.667 0.00 0.00 0.00 3.95
6081 7639 5.221185 CCTCTGATGTTTGATTATGCCCTTG 60.221 44.000 0.00 0.00 0.00 3.61
6082 7640 5.263599 TCTGATGTTTGATTATGCCCTTGT 58.736 37.500 0.00 0.00 0.00 3.16
6083 7641 5.716228 TCTGATGTTTGATTATGCCCTTGTT 59.284 36.000 0.00 0.00 0.00 2.83
6084 7642 5.722263 TGATGTTTGATTATGCCCTTGTTG 58.278 37.500 0.00 0.00 0.00 3.33
6085 7643 3.924144 TGTTTGATTATGCCCTTGTTGC 58.076 40.909 0.00 0.00 0.00 4.17
6086 7644 3.577848 TGTTTGATTATGCCCTTGTTGCT 59.422 39.130 0.00 0.00 0.00 3.91
6087 7645 4.769488 TGTTTGATTATGCCCTTGTTGCTA 59.231 37.500 0.00 0.00 0.00 3.49
6088 7646 5.105797 TGTTTGATTATGCCCTTGTTGCTAG 60.106 40.000 0.00 0.00 0.00 3.42
6089 7647 3.554934 TGATTATGCCCTTGTTGCTAGG 58.445 45.455 0.00 0.00 0.00 3.02
6090 7648 1.762708 TTATGCCCTTGTTGCTAGGC 58.237 50.000 0.00 0.00 45.96 3.93
6091 7649 0.106719 TATGCCCTTGTTGCTAGGCC 60.107 55.000 0.00 0.00 45.14 5.19
6092 7650 2.035626 GCCCTTGTTGCTAGGCCA 59.964 61.111 5.01 0.00 39.60 5.36
6100 7658 4.947388 CCTTGTTGCTAGGCCAGTTAATTA 59.053 41.667 5.01 0.00 0.00 1.40
6131 7689 0.620410 TACATAGGCAGCCCACCACT 60.620 55.000 8.22 0.00 0.00 4.00
6148 7706 1.135373 CACTGGAGCTCGACACGTAAT 60.135 52.381 7.83 0.00 0.00 1.89
6152 7710 0.179134 GAGCTCGACACGTAATGGCT 60.179 55.000 0.00 0.00 31.94 4.75
6153 7711 0.458543 AGCTCGACACGTAATGGCTG 60.459 55.000 0.00 0.00 31.94 4.85
6154 7712 1.421410 GCTCGACACGTAATGGCTGG 61.421 60.000 0.00 0.00 31.94 4.85
6158 7716 1.202417 CGACACGTAATGGCTGGAGAT 60.202 52.381 0.00 0.00 31.94 2.75
6159 7717 2.205074 GACACGTAATGGCTGGAGATG 58.795 52.381 0.00 0.00 31.11 2.90
6160 7718 1.555075 ACACGTAATGGCTGGAGATGT 59.445 47.619 0.00 0.00 0.00 3.06
6161 7719 2.027192 ACACGTAATGGCTGGAGATGTT 60.027 45.455 0.00 0.00 0.00 2.71
6162 7720 2.609459 CACGTAATGGCTGGAGATGTTC 59.391 50.000 0.00 0.00 0.00 3.18
6163 7721 2.213499 CGTAATGGCTGGAGATGTTCC 58.787 52.381 0.00 0.00 46.98 3.62
6164 7722 2.158900 CGTAATGGCTGGAGATGTTCCT 60.159 50.000 0.00 0.00 46.92 3.36
6165 7723 2.431954 AATGGCTGGAGATGTTCCTG 57.568 50.000 0.00 0.00 46.92 3.86
6166 7724 1.588239 ATGGCTGGAGATGTTCCTGA 58.412 50.000 4.51 0.00 46.92 3.86
6167 7725 1.361204 TGGCTGGAGATGTTCCTGAA 58.639 50.000 4.51 0.00 46.92 3.02
6168 7726 1.280133 TGGCTGGAGATGTTCCTGAAG 59.720 52.381 4.51 0.00 46.92 3.02
6169 7727 1.280421 GGCTGGAGATGTTCCTGAAGT 59.720 52.381 4.51 0.00 46.92 3.01
6170 7728 2.501723 GGCTGGAGATGTTCCTGAAGTA 59.498 50.000 4.51 0.00 46.92 2.24
6171 7729 3.431486 GGCTGGAGATGTTCCTGAAGTAG 60.431 52.174 4.51 0.00 46.92 2.57
6172 7730 3.791245 CTGGAGATGTTCCTGAAGTAGC 58.209 50.000 0.00 0.00 46.92 3.58
6173 7731 2.501723 TGGAGATGTTCCTGAAGTAGCC 59.498 50.000 0.00 0.00 46.92 3.93
6174 7732 2.158885 GGAGATGTTCCTGAAGTAGCCC 60.159 54.545 0.00 0.00 43.16 5.19
6175 7733 1.840635 AGATGTTCCTGAAGTAGCCCC 59.159 52.381 0.00 0.00 0.00 5.80
6176 7734 1.559682 GATGTTCCTGAAGTAGCCCCA 59.440 52.381 0.00 0.00 0.00 4.96
6177 7735 1.440618 TGTTCCTGAAGTAGCCCCAA 58.559 50.000 0.00 0.00 0.00 4.12
6178 7736 1.073284 TGTTCCTGAAGTAGCCCCAAC 59.927 52.381 0.00 0.00 0.00 3.77
6179 7737 1.073284 GTTCCTGAAGTAGCCCCAACA 59.927 52.381 0.00 0.00 0.00 3.33
6180 7738 1.440618 TCCTGAAGTAGCCCCAACAA 58.559 50.000 0.00 0.00 0.00 2.83
6181 7739 1.351017 TCCTGAAGTAGCCCCAACAAG 59.649 52.381 0.00 0.00 0.00 3.16
6182 7740 1.168714 CTGAAGTAGCCCCAACAAGC 58.831 55.000 0.00 0.00 0.00 4.01
6183 7741 0.251165 TGAAGTAGCCCCAACAAGCC 60.251 55.000 0.00 0.00 0.00 4.35
6184 7742 1.303317 AAGTAGCCCCAACAAGCCG 60.303 57.895 0.00 0.00 0.00 5.52
6185 7743 2.033602 GTAGCCCCAACAAGCCGT 59.966 61.111 0.00 0.00 0.00 5.68
6186 7744 1.196104 AGTAGCCCCAACAAGCCGTA 61.196 55.000 0.00 0.00 0.00 4.02
6187 7745 0.107361 GTAGCCCCAACAAGCCGTAT 60.107 55.000 0.00 0.00 0.00 3.06
6190 7748 1.510844 CCCCAACAAGCCGTATTGC 59.489 57.895 0.00 0.00 33.28 3.56
6204 7762 2.281762 CGTATTGCTGCCGTCTTTCTAC 59.718 50.000 0.00 0.00 0.00 2.59
6243 7801 3.309954 GGAGGAATCTGTTGTTACATCGC 59.690 47.826 0.00 0.00 32.86 4.58
6251 7809 3.884169 TGTTGTTACATCGCTGCTTTTC 58.116 40.909 0.00 0.00 0.00 2.29
6253 7811 2.778299 TGTTACATCGCTGCTTTTCCT 58.222 42.857 0.00 0.00 0.00 3.36
6254 7812 3.146066 TGTTACATCGCTGCTTTTCCTT 58.854 40.909 0.00 0.00 0.00 3.36
6255 7813 3.188460 TGTTACATCGCTGCTTTTCCTTC 59.812 43.478 0.00 0.00 0.00 3.46
6256 7814 1.168714 ACATCGCTGCTTTTCCTTCC 58.831 50.000 0.00 0.00 0.00 3.46
6266 7825 5.772169 GCTGCTTTTCCTTCCCTATATGATT 59.228 40.000 0.00 0.00 0.00 2.57
6268 7827 5.536161 TGCTTTTCCTTCCCTATATGATTGC 59.464 40.000 0.00 0.00 0.00 3.56
6275 7834 5.471456 CCTTCCCTATATGATTGCTTCACAC 59.529 44.000 0.00 0.00 37.11 3.82
6276 7835 5.894298 TCCCTATATGATTGCTTCACACT 57.106 39.130 0.00 0.00 37.11 3.55
6277 7836 6.994421 TCCCTATATGATTGCTTCACACTA 57.006 37.500 0.00 0.00 37.11 2.74
6278 7837 7.559335 TCCCTATATGATTGCTTCACACTAT 57.441 36.000 0.00 0.00 37.11 2.12
6279 7838 7.977818 TCCCTATATGATTGCTTCACACTATT 58.022 34.615 0.00 0.00 37.11 1.73
6280 7839 7.879677 TCCCTATATGATTGCTTCACACTATTG 59.120 37.037 0.00 0.00 37.11 1.90
6282 7841 8.933807 CCTATATGATTGCTTCACACTATTGAG 58.066 37.037 0.00 0.00 37.11 3.02
6283 7842 9.702494 CTATATGATTGCTTCACACTATTGAGA 57.298 33.333 0.00 0.00 37.11 3.27
6284 7843 6.922247 ATGATTGCTTCACACTATTGAGAG 57.078 37.500 0.00 0.00 37.11 3.20
6372 7937 0.922626 GAGGAGAAGGCCTTTCCCAT 59.077 55.000 28.67 18.72 38.73 4.00
6412 7977 4.706035 AGTTCTTCATCATCATGCTCTCC 58.294 43.478 0.00 0.00 0.00 3.71
6415 7980 4.704965 TCTTCATCATCATGCTCTCCAAG 58.295 43.478 0.00 0.00 0.00 3.61
6438 8003 4.683320 GTCCTTGAAGAAACTGGTACGTAC 59.317 45.833 17.56 17.56 0.00 3.67
6439 8004 3.671928 CCTTGAAGAAACTGGTACGTACG 59.328 47.826 18.98 15.01 0.00 3.67
6440 8005 3.988379 TGAAGAAACTGGTACGTACGT 57.012 42.857 25.98 25.98 0.00 3.57
6441 8006 4.305989 TGAAGAAACTGGTACGTACGTT 57.694 40.909 27.92 14.98 0.00 3.99
6475 8040 0.452987 CGTGATGCTTGGTCATTGGG 59.547 55.000 0.00 0.00 0.00 4.12
6485 8050 0.251787 GGTCATTGGGCTCTGGGTTT 60.252 55.000 0.00 0.00 0.00 3.27
6489 8054 1.080638 ATTGGGCTCTGGGTTTGGTA 58.919 50.000 0.00 0.00 0.00 3.25
6490 8055 0.111639 TTGGGCTCTGGGTTTGGTAC 59.888 55.000 0.00 0.00 0.00 3.34
6491 8056 0.770557 TGGGCTCTGGGTTTGGTACT 60.771 55.000 0.00 0.00 0.00 2.73
6492 8057 0.404426 GGGCTCTGGGTTTGGTACTT 59.596 55.000 0.00 0.00 0.00 2.24
6493 8058 1.203013 GGGCTCTGGGTTTGGTACTTT 60.203 52.381 0.00 0.00 0.00 2.66
6494 8059 1.886542 GGCTCTGGGTTTGGTACTTTG 59.113 52.381 0.00 0.00 0.00 2.77
6495 8060 1.886542 GCTCTGGGTTTGGTACTTTGG 59.113 52.381 0.00 0.00 0.00 3.28
6496 8061 2.751816 GCTCTGGGTTTGGTACTTTGGT 60.752 50.000 0.00 0.00 0.00 3.67
6509 8074 4.081586 GGTACTTTGGTTTGGTTGGTTCAA 60.082 41.667 0.00 0.00 0.00 2.69
6523 8088 5.290885 GGTTGGTTCAACACTTGTTCAATTC 59.709 40.000 12.06 0.00 45.11 2.17
6528 8093 5.913137 TCAACACTTGTTCAATTCCAACT 57.087 34.783 0.00 0.00 35.83 3.16
6544 8109 3.730761 CTGCTGCTTGACCCACGC 61.731 66.667 0.00 0.00 0.00 5.34
6547 8112 3.357079 CTGCTTGACCCACGCCAC 61.357 66.667 0.00 0.00 0.00 5.01
6551 8116 4.953868 TTGACCCACGCCACGTCG 62.954 66.667 0.00 0.00 38.32 5.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.912634 ACAAAATCATCTTGTAGTTTTGTATGG 57.087 29.630 11.45 0.00 45.67 2.74
41 42 9.747898 TGTGAATTAACAATAGGATTACCAACT 57.252 29.630 0.00 0.00 38.94 3.16
60 61 4.466015 ACTCTTGGGTGTGTTTTGTGAATT 59.534 37.500 0.00 0.00 0.00 2.17
75 77 9.161629 AGTTTTGATTAAACAAAAACTCTTGGG 57.838 29.630 20.95 0.00 46.93 4.12
88 90 9.908152 ATTGTAACCAGCTAGTTTTGATTAAAC 57.092 29.630 2.03 0.00 45.26 2.01
145 148 6.876789 TGCTCTTACCGTTTCATCTGATTTTA 59.123 34.615 0.00 0.00 0.00 1.52
147 150 5.245531 TGCTCTTACCGTTTCATCTGATTT 58.754 37.500 0.00 0.00 0.00 2.17
149 152 4.471904 TGCTCTTACCGTTTCATCTGAT 57.528 40.909 0.00 0.00 0.00 2.90
168 171 3.490419 GGCATCTTCATTGACTCCATTGC 60.490 47.826 0.00 0.00 0.00 3.56
173 176 1.303309 CGGGCATCTTCATTGACTCC 58.697 55.000 0.00 0.00 0.00 3.85
174 177 0.659957 GCGGGCATCTTCATTGACTC 59.340 55.000 0.00 0.00 0.00 3.36
218 221 4.229876 GGCAACAACTGAAAAGAGTATGC 58.770 43.478 0.00 0.00 33.05 3.14
240 659 3.722082 GCTGATCACACTTCTTTTACGCG 60.722 47.826 3.53 3.53 0.00 6.01
261 680 1.087501 GAGTGTCCGAAAATCCCAGC 58.912 55.000 0.00 0.00 0.00 4.85
262 681 2.770164 AGAGTGTCCGAAAATCCCAG 57.230 50.000 0.00 0.00 0.00 4.45
263 682 2.901192 TGTAGAGTGTCCGAAAATCCCA 59.099 45.455 0.00 0.00 0.00 4.37
264 683 3.194968 TCTGTAGAGTGTCCGAAAATCCC 59.805 47.826 0.00 0.00 0.00 3.85
265 684 4.158025 TCTCTGTAGAGTGTCCGAAAATCC 59.842 45.833 8.63 0.00 42.60 3.01
267 686 5.317733 CTCTCTGTAGAGTGTCCGAAAAT 57.682 43.478 8.63 0.00 43.75 1.82
268 687 4.768130 CTCTCTGTAGAGTGTCCGAAAA 57.232 45.455 8.63 0.00 43.75 2.29
312 731 8.877864 TTATTAAAAACTCCATGGTGACTGAT 57.122 30.769 20.43 8.53 0.00 2.90
333 752 8.084073 CCATCAACAACATCACTGAGTTTTATT 58.916 33.333 0.00 0.00 0.00 1.40
375 1162 0.250727 ATGTTGCAACTACCGCCAGT 60.251 50.000 28.61 2.83 0.00 4.00
383 1170 3.788227 AGAGGAACCATGTTGCAACTA 57.212 42.857 28.61 16.22 0.00 2.24
426 1213 3.711190 AGTTTGGATCACAAGGCCTTTTT 59.289 39.130 17.61 2.22 40.82 1.94
479 1266 4.019501 TCCGGTACCTAATTGGCTTACAAA 60.020 41.667 10.90 0.00 43.46 2.83
484 1271 2.775384 TCATCCGGTACCTAATTGGCTT 59.225 45.455 10.90 0.00 40.22 4.35
488 1275 5.411669 GGCTAATTCATCCGGTACCTAATTG 59.588 44.000 10.90 2.66 0.00 2.32
489 1276 5.072600 TGGCTAATTCATCCGGTACCTAATT 59.927 40.000 10.90 9.98 0.00 1.40
492 1279 3.576982 CTGGCTAATTCATCCGGTACCTA 59.423 47.826 10.90 0.00 0.00 3.08
495 1282 3.181469 TGTCTGGCTAATTCATCCGGTAC 60.181 47.826 0.00 0.00 0.00 3.34
497 1284 1.837439 TGTCTGGCTAATTCATCCGGT 59.163 47.619 0.00 0.00 0.00 5.28
516 1303 6.238320 CCAGAAGATTTCGAGCTAAAGGATTG 60.238 42.308 0.00 0.00 34.02 2.67
540 1327 2.755103 GGATCACAACATCCCAAGAACC 59.245 50.000 0.00 0.00 37.00 3.62
574 1361 8.479313 TGCCATATCGTATATCAAAAGATGAC 57.521 34.615 0.00 0.00 41.93 3.06
639 1426 8.810652 TTGTAAATTTGCAATTCTACACTTCC 57.189 30.769 16.50 0.00 0.00 3.46
644 1431 7.598493 GCCTCTTTGTAAATTTGCAATTCTACA 59.402 33.333 20.26 1.30 32.91 2.74
646 1433 7.665690 TGCCTCTTTGTAAATTTGCAATTCTA 58.334 30.769 20.26 6.72 32.91 2.10
694 1482 9.949174 GCAACAGACCAATTTTTGATTATTTTT 57.051 25.926 0.00 0.00 0.00 1.94
695 1483 8.567104 GGCAACAGACCAATTTTTGATTATTTT 58.433 29.630 0.00 0.00 0.00 1.82
696 1484 7.938490 AGGCAACAGACCAATTTTTGATTATTT 59.062 29.630 0.00 0.00 41.41 1.40
697 1485 7.388500 CAGGCAACAGACCAATTTTTGATTATT 59.612 33.333 0.00 0.00 41.41 1.40
698 1486 6.875195 CAGGCAACAGACCAATTTTTGATTAT 59.125 34.615 0.00 0.00 41.41 1.28
699 1487 6.222389 CAGGCAACAGACCAATTTTTGATTA 58.778 36.000 0.00 0.00 41.41 1.75
700 1488 5.058490 CAGGCAACAGACCAATTTTTGATT 58.942 37.500 0.00 0.00 41.41 2.57
701 1489 4.634199 CAGGCAACAGACCAATTTTTGAT 58.366 39.130 0.00 0.00 41.41 2.57
702 1490 3.740764 GCAGGCAACAGACCAATTTTTGA 60.741 43.478 0.00 0.00 41.41 2.69
703 1491 2.545106 GCAGGCAACAGACCAATTTTTG 59.455 45.455 0.00 0.00 41.41 2.44
748 1544 3.002791 TGGCATCTCGATCTTGTCAAAC 58.997 45.455 0.00 0.00 0.00 2.93
822 1618 2.601666 ACTCGCTGTCAGCTGGGA 60.602 61.111 22.13 11.39 39.60 4.37
933 1730 1.133976 AGATGCTTTCCCCTCCGATTG 60.134 52.381 0.00 0.00 0.00 2.67
1119 1916 1.378732 TTTACAGGAAAGGGGAGGGG 58.621 55.000 0.00 0.00 0.00 4.79
1163 2218 1.809271 CGACATTCAGGGGAGCTGATG 60.809 57.143 0.00 0.00 0.00 3.07
1165 2220 1.617018 CCGACATTCAGGGGAGCTGA 61.617 60.000 0.00 0.00 0.00 4.26
1170 2225 1.806496 ATCATCCGACATTCAGGGGA 58.194 50.000 0.00 0.00 0.00 4.81
1180 2235 5.759963 ACTCTCAACGTATAATCATCCGAC 58.240 41.667 0.00 0.00 0.00 4.79
1266 2329 2.694397 TCCACCTAGGAATCCTCCATG 58.306 52.381 17.98 2.20 45.65 3.66
1377 2447 6.086871 GTGTCAGCTAAAAGGTTATTTCAGC 58.913 40.000 0.00 0.00 0.00 4.26
1388 2458 6.706055 TCTGTTTATCGTGTCAGCTAAAAG 57.294 37.500 0.00 0.00 0.00 2.27
1406 2479 6.389906 GTGGCAAGTTAAATGCTTATCTGTT 58.610 36.000 12.65 0.00 43.34 3.16
1407 2480 5.105756 GGTGGCAAGTTAAATGCTTATCTGT 60.106 40.000 12.65 0.00 43.34 3.41
1408 2481 5.126061 AGGTGGCAAGTTAAATGCTTATCTG 59.874 40.000 12.65 0.00 43.34 2.90
1409 2482 5.264395 AGGTGGCAAGTTAAATGCTTATCT 58.736 37.500 12.65 6.78 43.34 1.98
1410 2483 5.582689 AGGTGGCAAGTTAAATGCTTATC 57.417 39.130 12.65 5.07 43.34 1.75
1411 2484 6.358974 AAAGGTGGCAAGTTAAATGCTTAT 57.641 33.333 12.65 0.00 43.34 1.73
1412 2485 5.799827 AAAGGTGGCAAGTTAAATGCTTA 57.200 34.783 12.65 2.54 43.34 3.09
1413 2486 4.687901 AAAGGTGGCAAGTTAAATGCTT 57.312 36.364 12.65 0.00 43.34 3.91
1414 2487 5.799827 TTAAAGGTGGCAAGTTAAATGCT 57.200 34.783 12.65 0.00 43.34 3.79
1415 2488 5.351189 CCATTAAAGGTGGCAAGTTAAATGC 59.649 40.000 6.05 6.05 43.08 3.56
1416 2489 6.966435 CCATTAAAGGTGGCAAGTTAAATG 57.034 37.500 0.00 0.00 0.00 2.32
1459 2532 9.920946 AATCTTCCTAAGGTTGCATTTCTTATA 57.079 29.630 0.00 0.00 28.71 0.98
1462 2535 8.829373 ATAATCTTCCTAAGGTTGCATTTCTT 57.171 30.769 0.00 0.00 33.06 2.52
1496 2571 3.924686 CAGAATGCTCAATTTTGGAGTGC 59.075 43.478 0.00 0.00 34.83 4.40
1509 2584 3.704061 ACTCTAGAGTTCCCAGAATGCTC 59.296 47.826 20.00 0.00 38.83 4.26
1518 2593 5.068067 CCTTTAGCAGTACTCTAGAGTTCCC 59.932 48.000 29.57 17.51 42.54 3.97
1536 2611 7.724061 ATGGGTACATTTTAGGCATACCTTTAG 59.276 37.037 0.00 0.00 40.08 1.85
1554 2629 2.181125 ACATCGGTACACATGGGTACA 58.819 47.619 33.33 18.61 44.26 2.90
1555 2630 2.973694 ACATCGGTACACATGGGTAC 57.026 50.000 27.02 27.02 42.26 3.34
1556 2631 4.025360 AGTAACATCGGTACACATGGGTA 58.975 43.478 2.93 2.93 0.00 3.69
1557 2632 2.835764 AGTAACATCGGTACACATGGGT 59.164 45.455 5.60 5.60 0.00 4.51
1558 2633 3.194861 CAGTAACATCGGTACACATGGG 58.805 50.000 0.00 0.00 0.00 4.00
1559 2634 2.607635 GCAGTAACATCGGTACACATGG 59.392 50.000 0.00 0.00 0.00 3.66
1560 2635 3.306973 CAGCAGTAACATCGGTACACATG 59.693 47.826 0.00 0.00 0.00 3.21
1621 2725 8.635765 AAACTGTCAGATAGCCTTTTGATTTA 57.364 30.769 6.91 0.00 0.00 1.40
1712 2816 7.922811 GGATACTCATCATTTTGGTTTTCATCC 59.077 37.037 0.00 0.00 32.32 3.51
1728 2832 7.761249 CCATTTTGGTTTTCAAGGATACTCATC 59.239 37.037 0.00 0.00 38.51 2.92
1729 2833 7.614494 CCATTTTGGTTTTCAAGGATACTCAT 58.386 34.615 0.00 0.00 38.51 2.90
1730 2834 6.991938 CCATTTTGGTTTTCAAGGATACTCA 58.008 36.000 0.00 0.00 38.51 3.41
1760 2864 7.602644 TGAAACAACTAGTGCTTACCTCATTAG 59.397 37.037 0.00 0.00 32.24 1.73
1764 2868 5.054477 GTGAAACAACTAGTGCTTACCTCA 58.946 41.667 0.00 0.00 36.32 3.86
1765 2869 4.451435 GGTGAAACAACTAGTGCTTACCTC 59.549 45.833 0.00 0.00 39.98 3.85
1884 2988 2.119801 AGAAGCTTCCATCAATGCGT 57.880 45.000 22.81 0.00 0.00 5.24
1886 2990 4.563061 ACAAAAGAAGCTTCCATCAATGC 58.437 39.130 22.81 0.00 0.00 3.56
1908 3012 2.432146 AGAAGCAGGCGTATGATTCAGA 59.568 45.455 17.91 0.00 45.71 3.27
1909 3013 2.799412 GAGAAGCAGGCGTATGATTCAG 59.201 50.000 17.91 0.00 45.71 3.02
1939 3043 3.942130 AATGCTTGTAGTTTGGGAAGC 57.058 42.857 0.00 0.00 41.03 3.86
1941 3045 5.242838 CCTGTTAATGCTTGTAGTTTGGGAA 59.757 40.000 0.00 0.00 0.00 3.97
1981 3085 1.001974 ACGAGCTACATTCAACTGGCA 59.998 47.619 0.00 0.00 0.00 4.92
1993 3097 2.546162 GCCTCCCTAATTGACGAGCTAC 60.546 54.545 0.00 0.00 0.00 3.58
2000 3104 3.087370 AGGTTTGCCTCCCTAATTGAC 57.913 47.619 0.00 0.00 42.67 3.18
2025 3129 8.165267 TCCTTCAGGGAAAATTACTTGGTATA 57.835 34.615 0.00 0.00 41.91 1.47
2032 3136 5.843019 TCACTCCTTCAGGGAAAATTACT 57.157 39.130 0.00 0.00 44.58 2.24
2093 3200 5.066505 CCACCTATGTGCTAGAAACCAATTC 59.933 44.000 0.00 0.00 41.35 2.17
2111 3218 2.435069 TCGAAAACTGTTCACCCACCTA 59.565 45.455 0.00 0.00 0.00 3.08
2120 3227 4.034510 CCCTCTATGCATCGAAAACTGTTC 59.965 45.833 0.19 0.00 0.00 3.18
2133 3240 4.101585 GCACCTATATATGCCCTCTATGCA 59.898 45.833 0.00 0.00 43.97 3.96
2134 3241 4.346418 AGCACCTATATATGCCCTCTATGC 59.654 45.833 4.97 0.00 43.12 3.14
2135 3242 5.221601 CCAGCACCTATATATGCCCTCTATG 60.222 48.000 4.97 0.00 43.12 2.23
2136 3243 4.904251 CCAGCACCTATATATGCCCTCTAT 59.096 45.833 4.97 0.00 43.12 1.98
2196 3305 7.519809 CGTCTTCATGTGTGGTTAGAAAATTGA 60.520 37.037 0.00 0.00 0.00 2.57
2234 3343 0.690192 TTCGAAGGTCTGGGCATCAA 59.310 50.000 0.00 0.00 0.00 2.57
2235 3344 0.690192 TTTCGAAGGTCTGGGCATCA 59.310 50.000 0.00 0.00 0.00 3.07
2236 3345 1.943340 GATTTCGAAGGTCTGGGCATC 59.057 52.381 0.00 0.00 0.00 3.91
2265 3374 5.430089 AGGATTCAGTTCCTAGGCTTAATGT 59.570 40.000 2.96 0.00 44.50 2.71
2287 3396 4.252073 GCTCATCATCTTAGGCATACAGG 58.748 47.826 0.00 0.00 0.00 4.00
2288 3397 4.891260 TGCTCATCATCTTAGGCATACAG 58.109 43.478 0.00 0.00 0.00 2.74
2297 3406 3.070878 TGCGGGTATTGCTCATCATCTTA 59.929 43.478 0.00 0.00 0.00 2.10
2305 3414 1.375853 GCACATGCGGGTATTGCTCA 61.376 55.000 0.00 0.00 0.00 4.26
2363 3486 0.815734 GGTACAGAAGGTAGCGCTCA 59.184 55.000 16.34 0.00 40.32 4.26
2422 3545 0.326264 GACCTGAGGAGCCATGTGTT 59.674 55.000 4.99 0.00 0.00 3.32
2428 3551 2.203832 TGCTGACCTGAGGAGCCA 60.204 61.111 4.99 0.00 31.31 4.75
2465 3952 7.681939 TGGATTTCATTTAGTGAACCAGTAC 57.318 36.000 0.00 0.00 46.14 2.73
2604 4091 7.801716 ATGTTACAGTAAGAAGTGCAGAAAA 57.198 32.000 0.00 0.00 0.00 2.29
2750 4237 7.995488 CCCTGAATGGAGATAACTACTTGAAAT 59.005 37.037 0.00 0.00 38.35 2.17
2783 4270 6.886459 AGTGAGACAATACCAAGCATTAATGT 59.114 34.615 16.61 1.42 0.00 2.71
2963 4450 1.472480 CCAGCACGGGTTTTGGATAAG 59.528 52.381 0.00 0.00 32.34 1.73
2993 4480 4.917385 TCAGCCCAAGTAAGATGCTAAAA 58.083 39.130 0.00 0.00 0.00 1.52
3021 4508 4.216257 GGCAAGACAGCTTATTCAGAACAA 59.784 41.667 0.00 0.00 31.81 2.83
3085 4572 6.312399 TGTCGTTGCTCAAGAAAATACAAT 57.688 33.333 0.00 0.00 0.00 2.71
3086 4573 5.743026 TGTCGTTGCTCAAGAAAATACAA 57.257 34.783 0.00 0.00 0.00 2.41
3087 4574 5.743026 TTGTCGTTGCTCAAGAAAATACA 57.257 34.783 0.00 0.00 0.00 2.29
3088 4575 6.031417 CGAATTGTCGTTGCTCAAGAAAATAC 59.969 38.462 0.00 0.00 42.53 1.89
3090 4577 4.911610 CGAATTGTCGTTGCTCAAGAAAAT 59.088 37.500 0.00 0.00 42.53 1.82
3093 4583 3.519908 CGAATTGTCGTTGCTCAAGAA 57.480 42.857 0.00 0.00 42.53 2.52
3113 4603 7.770801 ACCTCAACTGCAAAATAAAAAGAAC 57.229 32.000 0.00 0.00 0.00 3.01
3213 4704 6.611381 GTTGCTTGCAAATACACATCTCTAA 58.389 36.000 9.75 0.00 0.00 2.10
3254 4745 3.133901 TCAAGCCGCCATTACTGAGAATA 59.866 43.478 0.00 0.00 0.00 1.75
3439 4933 9.034544 GCTTGTTTCACTTCAATTCTTACAAAT 57.965 29.630 0.00 0.00 0.00 2.32
3496 4991 4.196971 CCTAGGCCACCTTTGTTATGTAC 58.803 47.826 5.01 0.00 34.61 2.90
3575 5070 9.769093 CGGAAACAAAAGTTAGTAGAATAATGG 57.231 33.333 0.00 0.00 0.00 3.16
3591 5086 5.955488 TCATGTGAGAAAACGGAAACAAAA 58.045 33.333 0.00 0.00 0.00 2.44
3763 5259 3.611986 TGCTTGAAAACAAGTCTTTTGCG 59.388 39.130 10.82 0.00 34.81 4.85
3791 5296 7.703621 ACTGCATCTTTATGATTTTCGGAAATG 59.296 33.333 6.35 0.00 35.65 2.32
3901 5407 6.812656 TGGTGATACAAAATGATGAAATGCAC 59.187 34.615 0.00 0.00 0.00 4.57
3998 5504 5.347635 GCTATTGACAACAACACGACATAGA 59.652 40.000 0.00 0.00 38.90 1.98
4005 5511 4.212425 TGGTAAGCTATTGACAACAACACG 59.788 41.667 0.00 0.00 38.90 4.49
4236 5745 2.436646 CGTACCTTGCCTGGCCAG 60.437 66.667 26.87 26.87 0.00 4.85
4237 5746 2.741486 GAACGTACCTTGCCTGGCCA 62.741 60.000 17.53 4.71 0.00 5.36
4238 5747 2.033602 AACGTACCTTGCCTGGCC 59.966 61.111 17.53 0.00 0.00 5.36
4239 5748 2.038837 GGAACGTACCTTGCCTGGC 61.039 63.158 12.87 12.87 0.00 4.85
4240 5749 4.296265 GGAACGTACCTTGCCTGG 57.704 61.111 0.00 0.00 0.00 4.45
4293 5802 6.430451 CCGTATTGACAAATTATGGAAGCTC 58.570 40.000 2.08 0.00 0.00 4.09
4457 5967 9.624373 ATTTAGTATTGATTTCTCTGCTGTGAT 57.376 29.630 0.00 0.00 0.00 3.06
4499 6009 5.337578 TGTCAAGGTAATGTCGATGATCA 57.662 39.130 0.00 0.00 0.00 2.92
4539 6050 5.458595 TCAGGCTCTGAGAAGGTAATATCA 58.541 41.667 9.28 0.00 35.39 2.15
4582 6093 2.182827 TCATCCAGAGCACAGCTAGTT 58.817 47.619 0.00 0.00 39.88 2.24
4792 6335 2.224426 ACGTCCTGAACATTTGTAGGCA 60.224 45.455 0.00 0.00 0.00 4.75
4794 6337 6.548441 TTTAACGTCCTGAACATTTGTAGG 57.452 37.500 0.00 0.00 0.00 3.18
4895 6438 8.142994 AGCAAATGGTAATCACTACTTAATCG 57.857 34.615 0.00 0.00 0.00 3.34
4900 6443 7.766278 CAGACTAGCAAATGGTAATCACTACTT 59.234 37.037 4.24 0.00 27.93 2.24
4954 6497 3.743396 CGAACAGCATTATCCTAAGAGGC 59.257 47.826 0.00 0.00 34.61 4.70
5090 6633 9.139174 ACGAATTTTGTTTCCATTCAATGATAC 57.861 29.630 0.00 0.00 0.00 2.24
5198 6742 4.037327 GGATGGCTCCTTAATTGCTTCTTC 59.963 45.833 0.00 0.00 38.65 2.87
5358 6902 1.276421 AGTTGCAGGAATCTGTAGCGT 59.724 47.619 0.00 0.00 40.54 5.07
5360 6904 2.977914 TCAGTTGCAGGAATCTGTAGC 58.022 47.619 0.00 0.00 42.78 3.58
5362 6906 5.164620 TGATTCAGTTGCAGGAATCTGTA 57.835 39.130 25.22 12.27 46.03 2.74
5460 7004 0.944386 TCCTTCTGCGTGCTTCAAAC 59.056 50.000 0.00 0.00 0.00 2.93
5699 7254 6.743110 TGCTGATAGTCAATGACTGTAGATC 58.257 40.000 24.74 18.66 43.30 2.75
5772 7327 2.664851 TGCCACCGAAAGTGCTCG 60.665 61.111 0.00 0.00 45.83 5.03
5815 7371 8.934023 ATAGGAAGACAAATGTTTCTTTACCA 57.066 30.769 0.00 0.00 32.04 3.25
5843 7401 1.986882 ACCAGAACTTCAAAGGCCAG 58.013 50.000 5.01 0.00 0.00 4.85
5876 7434 2.104792 GCCTACTGTCTCATTGCCCATA 59.895 50.000 0.00 0.00 0.00 2.74
5896 7454 2.798499 GCAATCTCATGTGCAATCAGGC 60.798 50.000 1.41 0.00 40.58 4.85
5897 7455 2.688446 AGCAATCTCATGTGCAATCAGG 59.312 45.455 8.54 0.00 43.42 3.86
5907 7465 8.242053 ACTGAAAATAAACTCAGCAATCTCATG 58.758 33.333 0.00 0.00 42.39 3.07
5926 7484 9.936759 AGAAACCAACAGATTTTAAACTGAAAA 57.063 25.926 11.61 0.00 37.54 2.29
5927 7485 9.936759 AAGAAACCAACAGATTTTAAACTGAAA 57.063 25.926 11.61 0.00 37.54 2.69
5933 7491 9.685828 CCGAATAAGAAACCAACAGATTTTAAA 57.314 29.630 0.00 0.00 0.00 1.52
5934 7492 8.301002 CCCGAATAAGAAACCAACAGATTTTAA 58.699 33.333 0.00 0.00 0.00 1.52
5935 7493 7.449086 ACCCGAATAAGAAACCAACAGATTTTA 59.551 33.333 0.00 0.00 0.00 1.52
5936 7494 6.266786 ACCCGAATAAGAAACCAACAGATTTT 59.733 34.615 0.00 0.00 0.00 1.82
5937 7495 5.773176 ACCCGAATAAGAAACCAACAGATTT 59.227 36.000 0.00 0.00 0.00 2.17
5938 7496 5.321927 ACCCGAATAAGAAACCAACAGATT 58.678 37.500 0.00 0.00 0.00 2.40
5939 7497 4.918588 ACCCGAATAAGAAACCAACAGAT 58.081 39.130 0.00 0.00 0.00 2.90
5940 7498 4.360951 ACCCGAATAAGAAACCAACAGA 57.639 40.909 0.00 0.00 0.00 3.41
5941 7499 5.646360 ACATACCCGAATAAGAAACCAACAG 59.354 40.000 0.00 0.00 0.00 3.16
5942 7500 5.562635 ACATACCCGAATAAGAAACCAACA 58.437 37.500 0.00 0.00 0.00 3.33
5943 7501 5.065602 GGACATACCCGAATAAGAAACCAAC 59.934 44.000 0.00 0.00 0.00 3.77
5944 7502 5.187687 GGACATACCCGAATAAGAAACCAA 58.812 41.667 0.00 0.00 0.00 3.67
5945 7503 4.773013 GGACATACCCGAATAAGAAACCA 58.227 43.478 0.00 0.00 0.00 3.67
5959 7517 0.814010 GTCACATGGCGGGACATACC 60.814 60.000 0.00 0.00 38.08 2.73
5960 7518 0.178068 AGTCACATGGCGGGACATAC 59.822 55.000 0.00 0.00 34.04 2.39
5961 7519 0.177836 CAGTCACATGGCGGGACATA 59.822 55.000 0.00 0.00 34.04 2.29
5962 7520 1.078214 CAGTCACATGGCGGGACAT 60.078 57.895 0.00 0.00 34.04 3.06
5963 7521 2.347114 CAGTCACATGGCGGGACA 59.653 61.111 0.00 0.00 34.04 4.02
5964 7522 3.127533 GCAGTCACATGGCGGGAC 61.128 66.667 0.00 0.00 0.00 4.46
5965 7523 4.408821 GGCAGTCACATGGCGGGA 62.409 66.667 0.00 0.00 35.90 5.14
5969 7527 1.402968 CAATACAGGCAGTCACATGGC 59.597 52.381 0.00 0.00 45.63 4.40
5970 7528 1.402968 GCAATACAGGCAGTCACATGG 59.597 52.381 0.00 0.00 0.00 3.66
5971 7529 1.063027 CGCAATACAGGCAGTCACATG 59.937 52.381 0.00 0.00 0.00 3.21
5972 7530 1.372582 CGCAATACAGGCAGTCACAT 58.627 50.000 0.00 0.00 0.00 3.21
5973 7531 0.673333 CCGCAATACAGGCAGTCACA 60.673 55.000 0.00 0.00 0.00 3.58
5974 7532 0.391130 TCCGCAATACAGGCAGTCAC 60.391 55.000 0.00 0.00 0.00 3.67
5975 7533 0.541392 ATCCGCAATACAGGCAGTCA 59.459 50.000 0.00 0.00 0.00 3.41
5976 7534 0.940126 CATCCGCAATACAGGCAGTC 59.060 55.000 0.00 0.00 0.00 3.51
5977 7535 0.541392 TCATCCGCAATACAGGCAGT 59.459 50.000 0.00 0.00 0.00 4.40
5978 7536 1.888215 ATCATCCGCAATACAGGCAG 58.112 50.000 0.00 0.00 0.00 4.85
5979 7537 2.346766 AATCATCCGCAATACAGGCA 57.653 45.000 0.00 0.00 0.00 4.75
5980 7538 4.935205 TGTATAATCATCCGCAATACAGGC 59.065 41.667 0.00 0.00 31.32 4.85
5981 7539 7.433708 TTTGTATAATCATCCGCAATACAGG 57.566 36.000 0.00 0.00 35.22 4.00
5982 7540 9.973246 GTATTTGTATAATCATCCGCAATACAG 57.027 33.333 0.00 0.00 35.22 2.74
5983 7541 8.652463 CGTATTTGTATAATCATCCGCAATACA 58.348 33.333 0.00 0.00 32.66 2.29
5984 7542 8.653338 ACGTATTTGTATAATCATCCGCAATAC 58.347 33.333 0.00 0.00 0.00 1.89
5985 7543 8.766000 ACGTATTTGTATAATCATCCGCAATA 57.234 30.769 0.00 0.00 0.00 1.90
5986 7544 7.667043 ACGTATTTGTATAATCATCCGCAAT 57.333 32.000 0.00 0.00 0.00 3.56
5987 7545 7.485418 AACGTATTTGTATAATCATCCGCAA 57.515 32.000 0.00 0.00 0.00 4.85
5988 7546 8.766000 ATAACGTATTTGTATAATCATCCGCA 57.234 30.769 0.00 0.00 0.00 5.69
6007 7565 8.836413 CACCATATACAGGAAATGAAATAACGT 58.164 33.333 0.24 0.00 0.00 3.99
6008 7566 8.289618 CCACCATATACAGGAAATGAAATAACG 58.710 37.037 0.24 0.00 0.00 3.18
6009 7567 8.576442 CCCACCATATACAGGAAATGAAATAAC 58.424 37.037 0.24 0.00 0.00 1.89
6010 7568 7.728083 CCCCACCATATACAGGAAATGAAATAA 59.272 37.037 0.24 0.00 0.00 1.40
6011 7569 7.147033 ACCCCACCATATACAGGAAATGAAATA 60.147 37.037 0.24 0.00 0.00 1.40
6012 7570 6.077322 CCCCACCATATACAGGAAATGAAAT 58.923 40.000 0.24 0.00 0.00 2.17
6013 7571 5.043732 ACCCCACCATATACAGGAAATGAAA 60.044 40.000 0.24 0.00 0.00 2.69
6014 7572 4.480537 ACCCCACCATATACAGGAAATGAA 59.519 41.667 0.24 0.00 0.00 2.57
6015 7573 4.051478 ACCCCACCATATACAGGAAATGA 58.949 43.478 0.24 0.00 0.00 2.57
6016 7574 4.453480 ACCCCACCATATACAGGAAATG 57.547 45.455 0.24 0.00 0.00 2.32
6017 7575 4.480537 TCAACCCCACCATATACAGGAAAT 59.519 41.667 0.24 0.00 0.00 2.17
6018 7576 3.853181 TCAACCCCACCATATACAGGAAA 59.147 43.478 0.24 0.00 0.00 3.13
6019 7577 3.465832 TCAACCCCACCATATACAGGAA 58.534 45.455 0.24 0.00 0.00 3.36
6020 7578 3.138123 TCAACCCCACCATATACAGGA 57.862 47.619 0.24 0.00 0.00 3.86
6021 7579 3.943671 TTCAACCCCACCATATACAGG 57.056 47.619 0.00 0.00 0.00 4.00
6022 7580 4.207165 CCTTTCAACCCCACCATATACAG 58.793 47.826 0.00 0.00 0.00 2.74
6023 7581 3.594232 ACCTTTCAACCCCACCATATACA 59.406 43.478 0.00 0.00 0.00 2.29
6024 7582 3.951680 CACCTTTCAACCCCACCATATAC 59.048 47.826 0.00 0.00 0.00 1.47
6025 7583 3.594232 ACACCTTTCAACCCCACCATATA 59.406 43.478 0.00 0.00 0.00 0.86
6026 7584 2.381961 ACACCTTTCAACCCCACCATAT 59.618 45.455 0.00 0.00 0.00 1.78
6027 7585 1.783979 ACACCTTTCAACCCCACCATA 59.216 47.619 0.00 0.00 0.00 2.74
6028 7586 0.560688 ACACCTTTCAACCCCACCAT 59.439 50.000 0.00 0.00 0.00 3.55
6029 7587 0.336737 AACACCTTTCAACCCCACCA 59.663 50.000 0.00 0.00 0.00 4.17
6030 7588 1.138069 CAAACACCTTTCAACCCCACC 59.862 52.381 0.00 0.00 0.00 4.61
6031 7589 1.138069 CCAAACACCTTTCAACCCCAC 59.862 52.381 0.00 0.00 0.00 4.61
6032 7590 1.273324 ACCAAACACCTTTCAACCCCA 60.273 47.619 0.00 0.00 0.00 4.96
6033 7591 1.491668 ACCAAACACCTTTCAACCCC 58.508 50.000 0.00 0.00 0.00 4.95
6034 7592 2.363038 GGTACCAAACACCTTTCAACCC 59.637 50.000 7.15 0.00 32.98 4.11
6035 7593 2.033675 CGGTACCAAACACCTTTCAACC 59.966 50.000 13.54 0.00 33.62 3.77
6036 7594 2.542205 GCGGTACCAAACACCTTTCAAC 60.542 50.000 13.54 0.00 33.62 3.18
6037 7595 1.677052 GCGGTACCAAACACCTTTCAA 59.323 47.619 13.54 0.00 33.62 2.69
6038 7596 1.310904 GCGGTACCAAACACCTTTCA 58.689 50.000 13.54 0.00 33.62 2.69
6039 7597 0.594602 GGCGGTACCAAACACCTTTC 59.405 55.000 13.54 0.00 38.86 2.62
6040 7598 0.184211 AGGCGGTACCAAACACCTTT 59.816 50.000 13.54 0.00 43.14 3.11
6041 7599 0.250597 GAGGCGGTACCAAACACCTT 60.251 55.000 13.54 0.00 43.14 3.50
6042 7600 1.125711 AGAGGCGGTACCAAACACCT 61.126 55.000 13.54 9.76 43.14 4.00
6043 7601 0.953960 CAGAGGCGGTACCAAACACC 60.954 60.000 13.54 4.80 43.14 4.16
6044 7602 0.034337 TCAGAGGCGGTACCAAACAC 59.966 55.000 13.54 0.00 43.14 3.32
6045 7603 0.981183 ATCAGAGGCGGTACCAAACA 59.019 50.000 13.54 0.00 43.14 2.83
6046 7604 1.338769 ACATCAGAGGCGGTACCAAAC 60.339 52.381 13.54 0.67 43.14 2.93
6047 7605 0.981183 ACATCAGAGGCGGTACCAAA 59.019 50.000 13.54 0.00 43.14 3.28
6048 7606 0.981183 AACATCAGAGGCGGTACCAA 59.019 50.000 13.54 0.00 43.14 3.67
6049 7607 0.981183 AAACATCAGAGGCGGTACCA 59.019 50.000 13.54 0.00 43.14 3.25
6050 7608 1.066430 TCAAACATCAGAGGCGGTACC 60.066 52.381 0.16 0.16 39.61 3.34
6051 7609 2.380084 TCAAACATCAGAGGCGGTAC 57.620 50.000 0.00 0.00 0.00 3.34
6052 7610 3.627395 AATCAAACATCAGAGGCGGTA 57.373 42.857 0.00 0.00 0.00 4.02
6053 7611 2.496899 AATCAAACATCAGAGGCGGT 57.503 45.000 0.00 0.00 0.00 5.68
6054 7612 3.304257 GCATAATCAAACATCAGAGGCGG 60.304 47.826 0.00 0.00 0.00 6.13
6055 7613 3.304257 GGCATAATCAAACATCAGAGGCG 60.304 47.826 0.00 0.00 0.00 5.52
6056 7614 3.005155 GGGCATAATCAAACATCAGAGGC 59.995 47.826 0.00 0.00 0.00 4.70
6057 7615 4.467769 AGGGCATAATCAAACATCAGAGG 58.532 43.478 0.00 0.00 0.00 3.69
6058 7616 5.359009 ACAAGGGCATAATCAAACATCAGAG 59.641 40.000 0.00 0.00 0.00 3.35
6059 7617 5.263599 ACAAGGGCATAATCAAACATCAGA 58.736 37.500 0.00 0.00 0.00 3.27
6060 7618 5.587388 ACAAGGGCATAATCAAACATCAG 57.413 39.130 0.00 0.00 0.00 2.90
6061 7619 5.722263 CAACAAGGGCATAATCAAACATCA 58.278 37.500 0.00 0.00 0.00 3.07
6062 7620 4.567959 GCAACAAGGGCATAATCAAACATC 59.432 41.667 0.00 0.00 0.00 3.06
6063 7621 4.223477 AGCAACAAGGGCATAATCAAACAT 59.777 37.500 0.00 0.00 0.00 2.71
6064 7622 3.577848 AGCAACAAGGGCATAATCAAACA 59.422 39.130 0.00 0.00 0.00 2.83
6065 7623 4.192429 AGCAACAAGGGCATAATCAAAC 57.808 40.909 0.00 0.00 0.00 2.93
6066 7624 4.402155 CCTAGCAACAAGGGCATAATCAAA 59.598 41.667 0.00 0.00 0.00 2.69
6067 7625 3.953612 CCTAGCAACAAGGGCATAATCAA 59.046 43.478 0.00 0.00 0.00 2.57
6068 7626 3.554934 CCTAGCAACAAGGGCATAATCA 58.445 45.455 0.00 0.00 0.00 2.57
6069 7627 2.294512 GCCTAGCAACAAGGGCATAATC 59.705 50.000 0.00 0.00 43.59 1.75
6070 7628 2.310538 GCCTAGCAACAAGGGCATAAT 58.689 47.619 0.00 0.00 43.59 1.28
6071 7629 1.762708 GCCTAGCAACAAGGGCATAA 58.237 50.000 0.00 0.00 43.59 1.90
6072 7630 3.494850 GCCTAGCAACAAGGGCATA 57.505 52.632 0.00 0.00 43.59 3.14
6073 7631 4.344237 GCCTAGCAACAAGGGCAT 57.656 55.556 0.00 0.00 43.59 4.40
6076 7634 0.251341 AACTGGCCTAGCAACAAGGG 60.251 55.000 3.32 0.00 34.46 3.95
6077 7635 2.489938 TAACTGGCCTAGCAACAAGG 57.510 50.000 3.32 0.00 37.17 3.61
6078 7636 5.066505 CCTAATTAACTGGCCTAGCAACAAG 59.933 44.000 3.32 0.00 0.00 3.16
6079 7637 4.947388 CCTAATTAACTGGCCTAGCAACAA 59.053 41.667 3.32 0.00 0.00 2.83
6080 7638 4.226394 TCCTAATTAACTGGCCTAGCAACA 59.774 41.667 3.32 0.00 0.00 3.33
6081 7639 4.777463 TCCTAATTAACTGGCCTAGCAAC 58.223 43.478 3.32 0.00 0.00 4.17
6082 7640 4.686122 GCTCCTAATTAACTGGCCTAGCAA 60.686 45.833 3.32 0.00 0.00 3.91
6083 7641 3.181454 GCTCCTAATTAACTGGCCTAGCA 60.181 47.826 3.32 0.00 0.00 3.49
6084 7642 3.071747 AGCTCCTAATTAACTGGCCTAGC 59.928 47.826 3.32 0.00 0.00 3.42
6085 7643 4.345257 TGAGCTCCTAATTAACTGGCCTAG 59.655 45.833 12.15 2.01 0.00 3.02
6086 7644 4.101119 GTGAGCTCCTAATTAACTGGCCTA 59.899 45.833 12.15 0.00 0.00 3.93
6087 7645 3.115390 TGAGCTCCTAATTAACTGGCCT 58.885 45.455 12.15 0.00 0.00 5.19
6088 7646 3.206964 GTGAGCTCCTAATTAACTGGCC 58.793 50.000 12.15 0.00 0.00 5.36
6089 7647 3.873910 TGTGAGCTCCTAATTAACTGGC 58.126 45.455 12.15 0.00 0.00 4.85
6090 7648 7.047891 TGTATTGTGAGCTCCTAATTAACTGG 58.952 38.462 12.15 0.00 0.00 4.00
6091 7649 8.668510 ATGTATTGTGAGCTCCTAATTAACTG 57.331 34.615 12.15 0.00 0.00 3.16
6092 7650 9.988815 CTATGTATTGTGAGCTCCTAATTAACT 57.011 33.333 12.15 1.58 0.00 2.24
6100 7658 3.041211 TGCCTATGTATTGTGAGCTCCT 58.959 45.455 12.15 0.00 0.00 3.69
6131 7689 0.172578 CCATTACGTGTCGAGCTCCA 59.827 55.000 8.47 0.00 0.00 3.86
6153 7711 2.158885 GGGCTACTTCAGGAACATCTCC 60.159 54.545 0.00 0.00 45.81 3.71
6154 7712 2.158885 GGGGCTACTTCAGGAACATCTC 60.159 54.545 0.00 0.00 0.00 2.75
6158 7716 1.073284 GTTGGGGCTACTTCAGGAACA 59.927 52.381 0.00 0.00 0.00 3.18
6159 7717 1.073284 TGTTGGGGCTACTTCAGGAAC 59.927 52.381 0.00 0.00 0.00 3.62
6160 7718 1.440618 TGTTGGGGCTACTTCAGGAA 58.559 50.000 0.00 0.00 0.00 3.36
6161 7719 1.351017 CTTGTTGGGGCTACTTCAGGA 59.649 52.381 0.00 0.00 0.00 3.86
6162 7720 1.826385 CTTGTTGGGGCTACTTCAGG 58.174 55.000 0.00 0.00 0.00 3.86
6163 7721 1.168714 GCTTGTTGGGGCTACTTCAG 58.831 55.000 0.00 0.00 0.00 3.02
6164 7722 0.251165 GGCTTGTTGGGGCTACTTCA 60.251 55.000 0.00 0.00 0.00 3.02
6165 7723 1.305930 CGGCTTGTTGGGGCTACTTC 61.306 60.000 0.00 0.00 0.00 3.01
6166 7724 1.303317 CGGCTTGTTGGGGCTACTT 60.303 57.895 0.00 0.00 0.00 2.24
6167 7725 1.196104 TACGGCTTGTTGGGGCTACT 61.196 55.000 0.00 0.00 0.00 2.57
6168 7726 0.107361 ATACGGCTTGTTGGGGCTAC 60.107 55.000 0.00 0.00 0.00 3.58
6169 7727 0.621609 AATACGGCTTGTTGGGGCTA 59.378 50.000 0.00 0.00 0.00 3.93
6170 7728 0.965363 CAATACGGCTTGTTGGGGCT 60.965 55.000 0.00 0.00 0.00 5.19
6171 7729 1.510844 CAATACGGCTTGTTGGGGC 59.489 57.895 0.00 0.00 0.00 5.80
6172 7730 0.965363 AGCAATACGGCTTGTTGGGG 60.965 55.000 2.85 0.00 42.71 4.96
6173 7731 0.171007 CAGCAATACGGCTTGTTGGG 59.829 55.000 2.85 0.00 42.71 4.12
6174 7732 0.456653 GCAGCAATACGGCTTGTTGG 60.457 55.000 14.57 2.24 42.71 3.77
6175 7733 0.456653 GGCAGCAATACGGCTTGTTG 60.457 55.000 10.35 10.35 42.71 3.33
6176 7734 1.883021 GGCAGCAATACGGCTTGTT 59.117 52.632 0.00 0.00 42.71 2.83
6177 7735 2.398554 CGGCAGCAATACGGCTTGT 61.399 57.895 0.00 0.00 42.71 3.16
6178 7736 2.309764 GACGGCAGCAATACGGCTTG 62.310 60.000 0.00 0.00 42.71 4.01
6179 7737 2.046314 ACGGCAGCAATACGGCTT 60.046 55.556 0.00 0.00 42.71 4.35
6181 7739 1.644786 AAAGACGGCAGCAATACGGC 61.645 55.000 0.00 0.00 38.96 5.68
6182 7740 0.373716 GAAAGACGGCAGCAATACGG 59.626 55.000 0.00 0.00 0.00 4.02
6183 7741 1.359848 AGAAAGACGGCAGCAATACG 58.640 50.000 0.00 0.00 0.00 3.06
6184 7742 3.062234 GTGTAGAAAGACGGCAGCAATAC 59.938 47.826 0.00 0.00 0.00 1.89
6185 7743 3.259064 GTGTAGAAAGACGGCAGCAATA 58.741 45.455 0.00 0.00 0.00 1.90
6186 7744 2.076863 GTGTAGAAAGACGGCAGCAAT 58.923 47.619 0.00 0.00 0.00 3.56
6187 7745 1.202592 TGTGTAGAAAGACGGCAGCAA 60.203 47.619 0.00 0.00 0.00 3.91
6190 7748 1.060713 CGTGTGTAGAAAGACGGCAG 58.939 55.000 0.00 0.00 33.53 4.85
6204 7762 2.416547 CCTCCTGCTTTATTCACGTGTG 59.583 50.000 16.51 0.00 0.00 3.82
6243 7801 6.294397 GCAATCATATAGGGAAGGAAAAGCAG 60.294 42.308 0.00 0.00 0.00 4.24
6251 7809 5.471456 GTGTGAAGCAATCATATAGGGAAGG 59.529 44.000 0.00 0.00 40.97 3.46
6253 7811 6.252599 AGTGTGAAGCAATCATATAGGGAA 57.747 37.500 0.00 0.00 40.97 3.97
6254 7812 5.894298 AGTGTGAAGCAATCATATAGGGA 57.106 39.130 0.00 0.00 40.97 4.20
6255 7813 7.879677 TCAATAGTGTGAAGCAATCATATAGGG 59.120 37.037 0.00 0.00 40.97 3.53
6256 7814 8.837788 TCAATAGTGTGAAGCAATCATATAGG 57.162 34.615 0.00 0.00 40.97 2.57
6266 7825 4.089361 TCTCCTCTCAATAGTGTGAAGCA 58.911 43.478 0.00 0.00 0.00 3.91
6268 7827 4.099266 CCCTCTCCTCTCAATAGTGTGAAG 59.901 50.000 0.00 0.00 0.00 3.02
6275 7834 2.892852 CTCTGCCCTCTCCTCTCAATAG 59.107 54.545 0.00 0.00 0.00 1.73
6276 7835 2.425538 CCTCTGCCCTCTCCTCTCAATA 60.426 54.545 0.00 0.00 0.00 1.90
6277 7836 1.692121 CCTCTGCCCTCTCCTCTCAAT 60.692 57.143 0.00 0.00 0.00 2.57
6278 7837 0.325110 CCTCTGCCCTCTCCTCTCAA 60.325 60.000 0.00 0.00 0.00 3.02
6279 7838 1.309347 CCTCTGCCCTCTCCTCTCA 59.691 63.158 0.00 0.00 0.00 3.27
6280 7839 2.133641 GCCTCTGCCCTCTCCTCTC 61.134 68.421 0.00 0.00 0.00 3.20
6282 7841 1.970352 CTTGCCTCTGCCCTCTCCTC 61.970 65.000 0.00 0.00 36.33 3.71
6283 7842 1.994507 CTTGCCTCTGCCCTCTCCT 60.995 63.158 0.00 0.00 36.33 3.69
6284 7843 2.588989 CTTGCCTCTGCCCTCTCC 59.411 66.667 0.00 0.00 36.33 3.71
6372 7937 2.417339 CTCGAAACCTGACGAGTCAA 57.583 50.000 7.38 0.00 46.90 3.18
6412 7977 4.211374 CGTACCAGTTTCTTCAAGGACTTG 59.789 45.833 5.72 5.72 41.71 3.16
6415 7980 3.725490 ACGTACCAGTTTCTTCAAGGAC 58.275 45.455 0.00 0.00 0.00 3.85
6462 8027 1.318158 CCAGAGCCCAATGACCAAGC 61.318 60.000 0.00 0.00 0.00 4.01
6475 8040 1.886542 CCAAAGTACCAAACCCAGAGC 59.113 52.381 0.00 0.00 0.00 4.09
6485 8050 3.103080 ACCAACCAAACCAAAGTACCA 57.897 42.857 0.00 0.00 0.00 3.25
6489 8054 3.325135 TGTTGAACCAACCAAACCAAAGT 59.675 39.130 7.29 0.00 42.96 2.66
6490 8055 3.682377 GTGTTGAACCAACCAAACCAAAG 59.318 43.478 7.29 0.00 42.96 2.77
6491 8056 3.325135 AGTGTTGAACCAACCAAACCAAA 59.675 39.130 7.29 0.00 42.96 3.28
6492 8057 2.900546 AGTGTTGAACCAACCAAACCAA 59.099 40.909 7.29 0.00 42.96 3.67
6493 8058 2.530701 AGTGTTGAACCAACCAAACCA 58.469 42.857 7.29 0.00 42.96 3.67
6494 8059 3.258228 CAAGTGTTGAACCAACCAAACC 58.742 45.455 7.29 0.00 42.96 3.27
6495 8060 3.920446 ACAAGTGTTGAACCAACCAAAC 58.080 40.909 7.29 0.23 42.96 2.93
6496 8061 4.039245 TGAACAAGTGTTGAACCAACCAAA 59.961 37.500 0.42 0.00 42.96 3.28
6509 8074 3.701040 AGCAGTTGGAATTGAACAAGTGT 59.299 39.130 16.81 7.14 45.32 3.55
6523 8088 1.529010 TGGGTCAAGCAGCAGTTGG 60.529 57.895 0.00 0.00 0.00 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.