Multiple sequence alignment - TraesCS4B01G241200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G241200 chr4B 100.000 4811 0 0 1 4811 500068744 500063934 0 8885
1 TraesCS4B01G241200 chr4B 96.503 2974 78 4 1840 4811 327358751 327355802 0 4892
2 TraesCS4B01G241200 chr6B 96.786 4822 119 7 1 4811 526755561 526750765 0 8013
3 TraesCS4B01G241200 chr6B 96.135 4813 136 13 1 4811 668992182 668996946 0 7812
4 TraesCS4B01G241200 chr6B 95.894 4822 157 12 1 4811 616549304 616554095 0 7769
5 TraesCS4B01G241200 chr6B 95.890 4818 163 12 1 4811 258478976 258483765 0 7768
6 TraesCS4B01G241200 chr6B 96.163 4405 137 7 1 4399 524348042 524352420 0 7169
7 TraesCS4B01G241200 chr3B 96.697 4814 153 5 1 4811 9327819 9323009 0 8004
8 TraesCS4B01G241200 chr3B 95.043 4821 178 12 1 4811 730280174 730275405 0 7522
9 TraesCS4B01G241200 chr7B 96.266 4820 150 19 1 4811 111358661 111353863 0 7877
10 TraesCS4B01G241200 chr7B 93.572 2007 118 8 2812 4811 81919091 81917089 0 2981
11 TraesCS4B01G241200 chr5B 95.785 4816 149 8 1 4811 49308358 49313124 0 7720
12 TraesCS4B01G241200 chr5B 96.574 2948 93 7 1 2943 450554097 450551153 0 4878
13 TraesCS4B01G241200 chr5A 89.731 1967 173 22 2853 4811 538779669 538781614 0 2486
14 TraesCS4B01G241200 chr6A 89.690 1969 174 22 2853 4811 60184449 60182500 0 2484


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G241200 chr4B 500063934 500068744 4810 True 8885 8885 100.000 1 4811 1 chr4B.!!$R2 4810
1 TraesCS4B01G241200 chr4B 327355802 327358751 2949 True 4892 4892 96.503 1840 4811 1 chr4B.!!$R1 2971
2 TraesCS4B01G241200 chr6B 526750765 526755561 4796 True 8013 8013 96.786 1 4811 1 chr6B.!!$R1 4810
3 TraesCS4B01G241200 chr6B 668992182 668996946 4764 False 7812 7812 96.135 1 4811 1 chr6B.!!$F4 4810
4 TraesCS4B01G241200 chr6B 616549304 616554095 4791 False 7769 7769 95.894 1 4811 1 chr6B.!!$F3 4810
5 TraesCS4B01G241200 chr6B 258478976 258483765 4789 False 7768 7768 95.890 1 4811 1 chr6B.!!$F1 4810
6 TraesCS4B01G241200 chr6B 524348042 524352420 4378 False 7169 7169 96.163 1 4399 1 chr6B.!!$F2 4398
7 TraesCS4B01G241200 chr3B 9323009 9327819 4810 True 8004 8004 96.697 1 4811 1 chr3B.!!$R1 4810
8 TraesCS4B01G241200 chr3B 730275405 730280174 4769 True 7522 7522 95.043 1 4811 1 chr3B.!!$R2 4810
9 TraesCS4B01G241200 chr7B 111353863 111358661 4798 True 7877 7877 96.266 1 4811 1 chr7B.!!$R2 4810
10 TraesCS4B01G241200 chr7B 81917089 81919091 2002 True 2981 2981 93.572 2812 4811 1 chr7B.!!$R1 1999
11 TraesCS4B01G241200 chr5B 49308358 49313124 4766 False 7720 7720 95.785 1 4811 1 chr5B.!!$F1 4810
12 TraesCS4B01G241200 chr5B 450551153 450554097 2944 True 4878 4878 96.574 1 2943 1 chr5B.!!$R1 2942
13 TraesCS4B01G241200 chr5A 538779669 538781614 1945 False 2486 2486 89.731 2853 4811 1 chr5A.!!$F1 1958
14 TraesCS4B01G241200 chr6A 60182500 60184449 1949 True 2484 2484 89.690 2853 4811 1 chr6A.!!$R1 1958

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
448 453 2.505337 GCCGTACATGTCACGCGA 60.505 61.111 15.93 0.00 38.07 5.87 F
1172 1178 0.028902 GACGAGCACAACCACAAACC 59.971 55.000 0.00 0.00 0.00 3.27 F
1865 1875 0.759346 AGGACCGTTCTTTGCTGACT 59.241 50.000 0.00 0.00 0.00 3.41 F
3357 3440 1.603802 CATTTCATAAGGCGGCGATGT 59.396 47.619 12.98 4.38 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1507 1516 0.252479 CTCTCCTTGCAGCACCATCT 59.748 55.0 0.00 0.00 0.00 2.90 R
2707 2719 1.164411 GCCATCGTCATTTCCACACA 58.836 50.0 0.00 0.00 0.00 3.72 R
3390 3473 0.876777 CCAGAACCGCGTGTGTTGTA 60.877 55.0 4.92 0.00 0.00 2.41 R
4419 4590 1.860676 TTTTCGTCGCTAAGTGCACT 58.139 45.0 15.25 15.25 43.06 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 3.758554 CCATGCCAGTAAAACTGTAGCTT 59.241 43.478 6.33 0.01 44.50 3.74
301 302 4.099881 ACACAAGAAGGTCAAATGCAACAT 59.900 37.500 0.00 0.00 0.00 2.71
448 453 2.505337 GCCGTACATGTCACGCGA 60.505 61.111 15.93 0.00 38.07 5.87
507 513 3.784701 ATCACTCGTAGATGGTGTGAC 57.215 47.619 0.00 0.00 39.90 3.67
586 592 5.129815 CCTATTACAGGGCCTACAACTACAA 59.870 44.000 5.28 0.00 41.26 2.41
596 602 4.628333 GCCTACAACTACAATTAACAGCGA 59.372 41.667 0.00 0.00 0.00 4.93
802 808 7.065085 CCGATACTGAAGTGAATGATGAAACTT 59.935 37.037 0.00 0.00 35.62 2.66
814 820 2.512485 TGAAACTTACGACGAGGCAA 57.488 45.000 0.00 0.00 0.00 4.52
884 890 3.009723 CGTACATTGGGCAGAGATTTGT 58.990 45.455 0.00 0.00 0.00 2.83
1032 1038 0.472471 AGGCACGGAGGAACAAGAAA 59.528 50.000 0.00 0.00 0.00 2.52
1172 1178 0.028902 GACGAGCACAACCACAAACC 59.971 55.000 0.00 0.00 0.00 3.27
1507 1516 4.621983 CGTGTCAGGAACATGTATTGGGTA 60.622 45.833 0.00 0.00 40.80 3.69
1789 1799 2.119495 GGCATAGAGGAGGTCTTTCCA 58.881 52.381 0.00 0.00 39.84 3.53
1865 1875 0.759346 AGGACCGTTCTTTGCTGACT 59.241 50.000 0.00 0.00 0.00 3.41
2248 2258 3.644966 TTACCGATGGAGAGGCAAATT 57.355 42.857 0.00 0.00 0.00 1.82
2398 2409 7.131565 GCCATGTTTAATGAAAAACTGTTTGG 58.868 34.615 6.53 0.88 39.57 3.28
2674 2686 5.824904 ACTCAAATGTAGATGCCATGTTC 57.175 39.130 0.00 0.00 0.00 3.18
2707 2719 4.787534 TGCTTCCATTGGGGGAAAATATTT 59.212 37.500 2.09 0.00 45.87 1.40
2825 2837 5.018539 TGGTATACTACAGTTGCCATGTC 57.981 43.478 2.25 0.00 32.02 3.06
2827 2839 5.050490 GGTATACTACAGTTGCCATGTCTG 58.950 45.833 2.25 0.00 35.60 3.51
2846 2858 3.326588 TCTGGTGTACTACAGTTGCCATT 59.673 43.478 14.25 0.00 36.17 3.16
2948 3029 3.980646 TGTTTGCCATGTTCAGTGTAC 57.019 42.857 0.00 0.00 0.00 2.90
2949 3030 3.550820 TGTTTGCCATGTTCAGTGTACT 58.449 40.909 1.38 0.00 0.00 2.73
2950 3031 4.709250 TGTTTGCCATGTTCAGTGTACTA 58.291 39.130 1.38 0.00 0.00 1.82
2951 3032 5.312895 TGTTTGCCATGTTCAGTGTACTAT 58.687 37.500 1.38 0.00 0.00 2.12
2952 3033 5.181056 TGTTTGCCATGTTCAGTGTACTATG 59.819 40.000 1.38 4.06 0.00 2.23
2953 3034 4.551702 TGCCATGTTCAGTGTACTATGT 57.448 40.909 1.38 0.00 0.00 2.29
2954 3035 4.905429 TGCCATGTTCAGTGTACTATGTT 58.095 39.130 1.38 0.00 0.00 2.71
2955 3036 5.312895 TGCCATGTTCAGTGTACTATGTTT 58.687 37.500 1.38 0.00 0.00 2.83
2956 3037 5.181056 TGCCATGTTCAGTGTACTATGTTTG 59.819 40.000 1.38 0.00 0.00 2.93
2957 3038 5.631026 CCATGTTCAGTGTACTATGTTTGC 58.369 41.667 1.38 0.00 0.00 3.68
2958 3039 5.391950 CCATGTTCAGTGTACTATGTTTGCC 60.392 44.000 1.38 0.00 0.00 4.52
2959 3040 4.709250 TGTTCAGTGTACTATGTTTGCCA 58.291 39.130 1.38 0.00 0.00 4.92
2960 3041 5.312895 TGTTCAGTGTACTATGTTTGCCAT 58.687 37.500 1.38 0.00 37.58 4.40
2961 3042 5.181056 TGTTCAGTGTACTATGTTTGCCATG 59.819 40.000 1.38 0.00 34.86 3.66
2962 3043 4.905429 TCAGTGTACTATGTTTGCCATGT 58.095 39.130 0.00 0.00 34.86 3.21
2963 3044 5.312895 TCAGTGTACTATGTTTGCCATGTT 58.687 37.500 0.00 0.00 34.86 2.71
2964 3045 5.411361 TCAGTGTACTATGTTTGCCATGTTC 59.589 40.000 0.00 0.00 34.86 3.18
2965 3046 5.181056 CAGTGTACTATGTTTGCCATGTTCA 59.819 40.000 0.00 0.00 34.86 3.18
2966 3047 5.412594 AGTGTACTATGTTTGCCATGTTCAG 59.587 40.000 0.00 0.00 34.86 3.02
2967 3048 5.181245 GTGTACTATGTTTGCCATGTTCAGT 59.819 40.000 0.00 0.00 34.86 3.41
2968 3049 4.771590 ACTATGTTTGCCATGTTCAGTG 57.228 40.909 0.00 0.00 34.86 3.66
2969 3050 4.144297 ACTATGTTTGCCATGTTCAGTGT 58.856 39.130 0.00 0.00 34.86 3.55
2970 3051 5.312895 ACTATGTTTGCCATGTTCAGTGTA 58.687 37.500 0.00 0.00 34.86 2.90
3069 3152 7.021196 GCACGATAGATTAACACAAAACACAT 58.979 34.615 0.00 0.00 41.38 3.21
3357 3440 1.603802 CATTTCATAAGGCGGCGATGT 59.396 47.619 12.98 4.38 0.00 3.06
3365 3448 2.895372 GCGGCGATGTACTTGGGG 60.895 66.667 12.98 0.00 0.00 4.96
3428 3513 0.108898 GCTGTGCATGACGAGAGACT 60.109 55.000 0.00 0.00 0.00 3.24
3508 3593 1.882912 TGATGAAGCGTGCAAGAGTT 58.117 45.000 2.99 0.00 0.00 3.01
3741 3827 3.635510 GGTCGCCCCAGAGAGATT 58.364 61.111 0.00 0.00 0.00 2.40
3743 3829 0.389757 GGTCGCCCCAGAGAGATTAC 59.610 60.000 0.00 0.00 0.00 1.89
3834 3920 4.208873 GCAGAAATTGTCGCAATGTGAAAA 59.791 37.500 1.50 1.50 0.00 2.29
4030 4148 4.963276 TGTGTATTAAAGCTGCCATGTC 57.037 40.909 0.00 0.00 0.00 3.06
4151 4297 3.580895 TGTTAGTTGTACTGGATCTGCCA 59.419 43.478 0.00 0.00 46.96 4.92
4161 4307 3.719268 TGGATCTGCCATGTTAGTTGT 57.281 42.857 0.00 0.00 43.33 3.32
4162 4308 4.835284 TGGATCTGCCATGTTAGTTGTA 57.165 40.909 0.00 0.00 43.33 2.41
4163 4309 4.513442 TGGATCTGCCATGTTAGTTGTAC 58.487 43.478 0.00 0.00 43.33 2.90
4164 4310 4.225042 TGGATCTGCCATGTTAGTTGTACT 59.775 41.667 0.00 0.00 43.33 2.73
4165 4311 4.572389 GGATCTGCCATGTTAGTTGTACTG 59.428 45.833 0.00 0.00 36.34 2.74
4166 4312 4.617253 TCTGCCATGTTAGTTGTACTGT 57.383 40.909 0.00 0.00 0.00 3.55
4167 4313 5.731957 TCTGCCATGTTAGTTGTACTGTA 57.268 39.130 0.00 0.00 0.00 2.74
4168 4314 6.294361 TCTGCCATGTTAGTTGTACTGTAT 57.706 37.500 0.00 0.00 0.00 2.29
4169 4315 6.338146 TCTGCCATGTTAGTTGTACTGTATC 58.662 40.000 0.00 0.00 0.00 2.24
4170 4316 6.154534 TCTGCCATGTTAGTTGTACTGTATCT 59.845 38.462 0.00 0.00 0.00 1.98
4171 4317 6.106003 TGCCATGTTAGTTGTACTGTATCTG 58.894 40.000 0.00 0.00 0.00 2.90
4172 4318 6.106673 GCCATGTTAGTTGTACTGTATCTGT 58.893 40.000 0.00 0.00 0.00 3.41
4173 4319 6.255887 GCCATGTTAGTTGTACTGTATCTGTC 59.744 42.308 0.00 0.00 0.00 3.51
4301 4470 1.373590 ATGGCAAATACCACGCGGTC 61.374 55.000 12.47 0.00 44.71 4.79
4334 4504 0.515564 GTGTGTTGTGGGCGATGTAC 59.484 55.000 0.00 0.00 0.00 2.90
4419 4590 1.770110 CCCTACCCCATGCTAGCCA 60.770 63.158 13.29 0.24 0.00 4.75
4534 4706 7.994911 TGCCATCTGTTTTAGAACATCATAGAT 59.005 33.333 0.00 0.00 44.30 1.98
4697 4873 2.302157 ACCACCACTACAAAGTAGCCTC 59.698 50.000 4.20 0.00 33.48 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 1.455849 CAGTTGCCCCTTCTGTGGA 59.544 57.895 0.00 0.00 0.00 4.02
448 453 1.609208 AACAGCAAGCCGTGATTCTT 58.391 45.000 0.00 0.00 0.00 2.52
507 513 1.083489 AACATGTGTATCGCAACGGG 58.917 50.000 0.00 0.00 0.00 5.28
586 592 2.510691 CCCCGCGTCGCTGTTAAT 60.511 61.111 16.36 0.00 0.00 1.40
596 602 3.077519 GCAGTAGATGTCCCCGCGT 62.078 63.158 4.92 0.00 0.00 6.01
802 808 1.186917 TCCCCTTTTGCCTCGTCGTA 61.187 55.000 0.00 0.00 0.00 3.43
814 820 0.106519 CCGCCATCTTCATCCCCTTT 60.107 55.000 0.00 0.00 0.00 3.11
884 890 4.182693 TCCTTTGCTTCTTCGAACGATA 57.817 40.909 0.00 0.00 0.00 2.92
1032 1038 2.044946 GGCGCATCACCTTTCCCT 60.045 61.111 10.83 0.00 0.00 4.20
1172 1178 3.933332 GACCAGGTCGAACTTCTTTATGG 59.067 47.826 0.00 0.00 0.00 2.74
1507 1516 0.252479 CTCTCCTTGCAGCACCATCT 59.748 55.000 0.00 0.00 0.00 2.90
1654 1663 0.595567 CCGTGTCTTCGTTCCGAACA 60.596 55.000 11.74 0.00 41.05 3.18
1789 1799 2.203523 TGCCTGTGCACTGCCAAT 60.204 55.556 23.16 0.00 44.23 3.16
2414 2425 4.669206 TTTCATTGAACATGGCAACTGT 57.331 36.364 0.00 0.00 37.61 3.55
2583 2595 5.996513 AGTAAACATGGCAATTGCATTTCAA 59.003 32.000 30.32 9.75 44.36 2.69
2707 2719 1.164411 GCCATCGTCATTTCCACACA 58.836 50.000 0.00 0.00 0.00 3.72
2825 2837 2.831685 TGGCAACTGTAGTACACCAG 57.168 50.000 6.32 9.52 37.61 4.00
2827 2839 4.154195 CAGAAATGGCAACTGTAGTACACC 59.846 45.833 0.00 0.00 37.61 4.16
2846 2858 1.593196 GCAACTGCAGTACACCAGAA 58.407 50.000 22.01 0.00 41.59 3.02
2948 3029 4.771590 ACACTGAACATGGCAAACATAG 57.228 40.909 0.00 0.00 37.84 2.23
2949 3030 5.312895 AGTACACTGAACATGGCAAACATA 58.687 37.500 0.00 0.00 37.84 2.29
2950 3031 4.144297 AGTACACTGAACATGGCAAACAT 58.856 39.130 0.00 0.00 41.57 2.71
2951 3032 3.550820 AGTACACTGAACATGGCAAACA 58.449 40.909 0.00 0.00 0.00 2.83
2952 3033 5.181245 ACATAGTACACTGAACATGGCAAAC 59.819 40.000 0.00 0.00 0.00 2.93
2953 3034 5.312895 ACATAGTACACTGAACATGGCAAA 58.687 37.500 0.00 0.00 0.00 3.68
2954 3035 4.905429 ACATAGTACACTGAACATGGCAA 58.095 39.130 0.00 0.00 0.00 4.52
2955 3036 4.551702 ACATAGTACACTGAACATGGCA 57.448 40.909 0.00 0.00 0.00 4.92
2956 3037 5.631026 CAAACATAGTACACTGAACATGGC 58.369 41.667 0.00 0.00 0.00 4.40
2957 3038 5.391950 GGCAAACATAGTACACTGAACATGG 60.392 44.000 0.00 0.00 0.00 3.66
2958 3039 5.181056 TGGCAAACATAGTACACTGAACATG 59.819 40.000 0.00 0.00 0.00 3.21
2959 3040 5.312895 TGGCAAACATAGTACACTGAACAT 58.687 37.500 0.00 0.00 0.00 2.71
2960 3041 4.709250 TGGCAAACATAGTACACTGAACA 58.291 39.130 0.00 0.00 0.00 3.18
2961 3042 5.880054 ATGGCAAACATAGTACACTGAAC 57.120 39.130 0.00 0.00 38.26 3.18
2962 3043 7.826744 TGAATATGGCAAACATAGTACACTGAA 59.173 33.333 0.00 0.00 44.79 3.02
2963 3044 7.334858 TGAATATGGCAAACATAGTACACTGA 58.665 34.615 0.00 0.00 44.79 3.41
2964 3045 7.552458 TGAATATGGCAAACATAGTACACTG 57.448 36.000 0.00 0.00 44.79 3.66
2965 3046 8.574251 TTTGAATATGGCAAACATAGTACACT 57.426 30.769 0.00 0.00 44.79 3.55
3077 3160 5.355350 CGCTTTATTTCTTCCTGGAATCTGT 59.645 40.000 10.03 0.09 0.00 3.41
3357 3440 1.220749 GTCATCAGCGCCCCAAGTA 59.779 57.895 2.29 0.00 0.00 2.24
3390 3473 0.876777 CCAGAACCGCGTGTGTTGTA 60.877 55.000 4.92 0.00 0.00 2.41
3428 3513 1.881925 CGGCTTCCATGGTTGACTCAA 60.882 52.381 12.58 0.00 0.00 3.02
3741 3827 4.338012 TCTCCAATCCTGACTTGTACGTA 58.662 43.478 0.00 0.00 0.00 3.57
3743 3829 3.868757 TCTCCAATCCTGACTTGTACG 57.131 47.619 0.00 0.00 0.00 3.67
4020 4114 1.742761 AGTACACATGACATGGCAGC 58.257 50.000 19.39 7.19 33.60 5.25
4030 4148 4.261322 GGCATGGCAGATTTAGTACACATG 60.261 45.833 15.47 0.00 37.94 3.21
4130 4276 4.202245 TGGCAGATCCAGTACAACTAAC 57.798 45.455 0.00 0.00 40.72 2.34
4151 4297 8.531982 ACATGACAGATACAGTACAACTAACAT 58.468 33.333 0.00 0.00 0.00 2.71
4152 4298 7.892609 ACATGACAGATACAGTACAACTAACA 58.107 34.615 0.00 0.00 0.00 2.41
4153 4299 8.758633 AACATGACAGATACAGTACAACTAAC 57.241 34.615 0.00 0.00 0.00 2.34
4156 4302 9.944376 AATTAACATGACAGATACAGTACAACT 57.056 29.630 0.00 0.00 0.00 3.16
4162 4308 9.618890 AAGCATAATTAACATGACAGATACAGT 57.381 29.630 0.00 0.00 0.00 3.55
4163 4309 9.874215 CAAGCATAATTAACATGACAGATACAG 57.126 33.333 0.00 0.00 0.00 2.74
4164 4310 9.612066 TCAAGCATAATTAACATGACAGATACA 57.388 29.630 0.00 0.00 0.00 2.29
4167 4313 9.570468 AGATCAAGCATAATTAACATGACAGAT 57.430 29.630 0.00 3.06 0.00 2.90
4168 4314 8.833493 CAGATCAAGCATAATTAACATGACAGA 58.167 33.333 0.00 0.00 0.00 3.41
4169 4315 7.590322 GCAGATCAAGCATAATTAACATGACAG 59.410 37.037 0.00 0.00 0.00 3.51
4170 4316 7.420002 GCAGATCAAGCATAATTAACATGACA 58.580 34.615 0.00 0.00 0.00 3.58
4171 4317 6.860023 GGCAGATCAAGCATAATTAACATGAC 59.140 38.462 0.00 0.00 0.00 3.06
4172 4318 6.546772 TGGCAGATCAAGCATAATTAACATGA 59.453 34.615 0.00 0.00 0.00 3.07
4173 4319 6.741109 TGGCAGATCAAGCATAATTAACATG 58.259 36.000 11.57 0.00 0.00 3.21
4301 4470 6.147821 CCCACAACACACTATTGTTTCTCTAG 59.852 42.308 0.00 0.00 38.22 2.43
4334 4504 3.453424 CCTTTTTCCAACTTGTTTCCCG 58.547 45.455 0.00 0.00 0.00 5.14
4419 4590 1.860676 TTTTCGTCGCTAAGTGCACT 58.139 45.000 15.25 15.25 43.06 4.40
4534 4706 3.118847 TCCAGTTTGCTGTTTTGATTGCA 60.119 39.130 0.00 0.00 41.02 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.