Multiple sequence alignment - TraesCS4B01G239300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G239300 chr4B 100.000 2141 0 0 1508 3648 496463545 496465685 0.000000e+00 3954
1 TraesCS4B01G239300 chr4B 100.000 1215 0 0 1 1215 496462038 496463252 0.000000e+00 2244
2 TraesCS4B01G239300 chr4D 95.005 2162 84 7 1508 3648 401417313 401419471 0.000000e+00 3373
3 TraesCS4B01G239300 chr4D 95.097 1856 70 5 1508 3342 417813368 417815223 0.000000e+00 2904
4 TraesCS4B01G239300 chr4D 96.739 368 11 1 848 1215 401416892 401417258 2.410000e-171 612
5 TraesCS4B01G239300 chr4D 94.167 360 6 9 848 1207 417812901 417813245 5.360000e-148 534
6 TraesCS4B01G239300 chr4A 93.843 2160 92 11 1525 3648 59244562 59246716 0.000000e+00 3214
7 TraesCS4B01G239300 chr4A 97.382 382 10 0 1508 1889 59244152 59244533 0.000000e+00 651
8 TraesCS4B01G239300 chr4A 96.021 377 5 5 838 1214 59243706 59244072 4.030000e-169 604
9 TraesCS4B01G239300 chr4A 84.330 351 45 6 254 595 454117440 454117789 5.840000e-88 335
10 TraesCS4B01G239300 chr2B 94.567 589 27 3 254 838 639489522 639490109 0.000000e+00 905
11 TraesCS4B01G239300 chr2B 94.902 255 10 2 1 255 639488546 639488797 2.640000e-106 396
12 TraesCS4B01G239300 chr7D 96.579 380 13 0 3269 3648 340167902 340168281 6.650000e-177 630
13 TraesCS4B01G239300 chr6A 88.761 347 31 4 255 593 431757324 431756978 5.630000e-113 418
14 TraesCS4B01G239300 chr6A 88.073 327 31 4 280 598 495439065 495438739 7.390000e-102 381
15 TraesCS4B01G239300 chr7A 87.966 349 34 4 255 595 561609828 561610176 4.390000e-109 405
16 TraesCS4B01G239300 chr6B 87.679 349 35 4 255 595 142694330 142694678 2.040000e-107 399
17 TraesCS4B01G239300 chr6B 86.895 351 36 6 257 598 560976668 560976319 5.710000e-103 385
18 TraesCS4B01G239300 chr6B 86.895 351 37 5 254 595 560983470 560983820 5.710000e-103 385
19 TraesCS4B01G239300 chr7B 94.902 255 11 1 1 255 319046132 319045880 7.340000e-107 398
20 TraesCS4B01G239300 chr7B 84.581 227 20 12 34 254 347332734 347332951 1.030000e-50 211
21 TraesCS4B01G239300 chr7B 84.513 226 22 11 34 254 658057938 658058155 1.030000e-50 211
22 TraesCS4B01G239300 chr5A 87.572 346 35 4 261 598 492989732 492989387 9.490000e-106 394
23 TraesCS4B01G239300 chr5A 84.141 227 21 12 34 254 237372723 237372506 4.770000e-49 206


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G239300 chr4B 496462038 496465685 3647 False 3099.000000 3954 100.000000 1 3648 2 chr4B.!!$F1 3647
1 TraesCS4B01G239300 chr4D 401416892 401419471 2579 False 1992.500000 3373 95.872000 848 3648 2 chr4D.!!$F1 2800
2 TraesCS4B01G239300 chr4D 417812901 417815223 2322 False 1719.000000 2904 94.632000 848 3342 2 chr4D.!!$F2 2494
3 TraesCS4B01G239300 chr4A 59243706 59246716 3010 False 1489.666667 3214 95.748667 838 3648 3 chr4A.!!$F2 2810
4 TraesCS4B01G239300 chr2B 639488546 639490109 1563 False 650.500000 905 94.734500 1 838 2 chr2B.!!$F1 837

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
332 333 0.032403 TTGCCATGTGCTCTGTTTGC 59.968 50.0 7.54 0.0 42.00 3.68 F
335 336 0.038892 CCATGTGCTCTGTTTGCCAC 60.039 55.0 0.00 0.0 0.00 5.01 F
336 337 0.038892 CATGTGCTCTGTTTGCCACC 60.039 55.0 0.00 0.0 0.00 4.61 F
644 645 0.179179 GACTGGCGATTGAAGCTTGC 60.179 55.0 2.10 0.0 34.52 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2254 2648 0.036732 TCATCCCAGCCACAGACAAC 59.963 55.000 0.0 0.0 0.0 3.32 R
2353 2747 0.178921 TCCTCTGACACAGCTCCCTT 60.179 55.000 0.0 0.0 0.0 3.95 R
2578 2972 3.216800 TGCTAATTCCTCATCACCATGC 58.783 45.455 0.0 0.0 0.0 4.06 R
2767 3188 0.978146 CACGGGGGTCTCTCTTCCAT 60.978 60.000 0.0 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 1.640917 ACAGGGTTAGACGTGGTGAT 58.359 50.000 0.00 0.00 0.00 3.06
49 50 1.549170 ACAGGGTTAGACGTGGTGATC 59.451 52.381 0.00 0.00 0.00 2.92
50 51 1.548719 CAGGGTTAGACGTGGTGATCA 59.451 52.381 0.00 0.00 0.00 2.92
51 52 2.168521 CAGGGTTAGACGTGGTGATCAT 59.831 50.000 0.00 0.00 0.00 2.45
52 53 2.168521 AGGGTTAGACGTGGTGATCATG 59.831 50.000 0.00 0.00 38.32 3.07
53 54 2.550978 GGTTAGACGTGGTGATCATGG 58.449 52.381 0.00 0.00 36.71 3.66
54 55 2.167693 GGTTAGACGTGGTGATCATGGA 59.832 50.000 0.00 0.00 36.71 3.41
55 56 3.181465 GGTTAGACGTGGTGATCATGGAT 60.181 47.826 0.00 0.00 36.71 3.41
56 57 2.609427 AGACGTGGTGATCATGGATG 57.391 50.000 0.00 0.00 36.71 3.51
57 58 2.110578 AGACGTGGTGATCATGGATGA 58.889 47.619 0.00 0.00 41.70 2.92
58 59 2.102084 AGACGTGGTGATCATGGATGAG 59.898 50.000 0.00 0.00 40.64 2.90
59 60 1.224075 CGTGGTGATCATGGATGAGC 58.776 55.000 0.00 0.00 43.14 4.26
67 68 5.148651 TGATCATGGATGAGCAGAGTATG 57.851 43.478 3.46 0.00 46.92 2.39
100 101 8.964476 AATTAGTATGATGATCTTTTCCACGT 57.036 30.769 0.00 0.00 0.00 4.49
101 102 7.770801 TTAGTATGATGATCTTTTCCACGTG 57.229 36.000 9.08 9.08 0.00 4.49
102 103 5.734720 AGTATGATGATCTTTTCCACGTGT 58.265 37.500 15.65 0.00 0.00 4.49
103 104 6.873997 AGTATGATGATCTTTTCCACGTGTA 58.126 36.000 15.65 0.00 0.00 2.90
104 105 6.757010 AGTATGATGATCTTTTCCACGTGTAC 59.243 38.462 15.65 5.05 0.00 2.90
105 106 5.147330 TGATGATCTTTTCCACGTGTACT 57.853 39.130 15.65 0.00 0.00 2.73
106 107 6.275494 TGATGATCTTTTCCACGTGTACTA 57.725 37.500 15.65 0.00 0.00 1.82
107 108 6.693466 TGATGATCTTTTCCACGTGTACTAA 58.307 36.000 15.65 0.26 0.00 2.24
108 109 6.588756 TGATGATCTTTTCCACGTGTACTAAC 59.411 38.462 15.65 0.00 0.00 2.34
123 124 8.976715 CGTGTACTAACGTACTTTCAATTTTT 57.023 30.769 0.00 0.00 44.97 1.94
187 188 9.996554 TCATAGTGATTCTTTCAGTTAAGTTGA 57.003 29.630 0.00 0.00 38.90 3.18
189 190 7.195839 AGTGATTCTTTCAGTTAAGTTGAGC 57.804 36.000 0.00 0.00 34.14 4.26
190 191 6.995091 AGTGATTCTTTCAGTTAAGTTGAGCT 59.005 34.615 0.00 0.00 34.14 4.09
191 192 7.500559 AGTGATTCTTTCAGTTAAGTTGAGCTT 59.499 33.333 0.00 0.00 34.14 3.74
192 193 8.774586 GTGATTCTTTCAGTTAAGTTGAGCTTA 58.225 33.333 0.00 0.00 35.33 3.09
193 194 9.337396 TGATTCTTTCAGTTAAGTTGAGCTTAA 57.663 29.630 0.00 0.00 44.71 1.85
204 205 6.619801 AAGTTGAGCTTAAATCGTTTGTCT 57.380 33.333 0.00 0.00 35.27 3.41
205 206 6.229561 AGTTGAGCTTAAATCGTTTGTCTC 57.770 37.500 0.00 0.00 0.00 3.36
206 207 5.179555 AGTTGAGCTTAAATCGTTTGTCTCC 59.820 40.000 0.00 0.00 0.00 3.71
207 208 4.894784 TGAGCTTAAATCGTTTGTCTCCT 58.105 39.130 0.00 0.00 0.00 3.69
208 209 4.690748 TGAGCTTAAATCGTTTGTCTCCTG 59.309 41.667 0.00 0.00 0.00 3.86
209 210 3.437049 AGCTTAAATCGTTTGTCTCCTGC 59.563 43.478 0.00 0.00 0.00 4.85
210 211 3.437049 GCTTAAATCGTTTGTCTCCTGCT 59.563 43.478 0.00 0.00 0.00 4.24
211 212 4.436183 GCTTAAATCGTTTGTCTCCTGCTC 60.436 45.833 0.00 0.00 0.00 4.26
212 213 3.409026 AAATCGTTTGTCTCCTGCTCT 57.591 42.857 0.00 0.00 0.00 4.09
213 214 2.663826 ATCGTTTGTCTCCTGCTCTC 57.336 50.000 0.00 0.00 0.00 3.20
214 215 1.328279 TCGTTTGTCTCCTGCTCTCA 58.672 50.000 0.00 0.00 0.00 3.27
215 216 1.270826 TCGTTTGTCTCCTGCTCTCAG 59.729 52.381 0.00 0.00 40.02 3.35
216 217 1.437625 GTTTGTCTCCTGCTCTCAGC 58.562 55.000 0.00 0.00 42.82 4.26
217 218 1.001860 GTTTGTCTCCTGCTCTCAGCT 59.998 52.381 0.00 0.00 42.97 4.24
218 219 2.222227 TTGTCTCCTGCTCTCAGCTA 57.778 50.000 0.00 0.00 42.97 3.32
219 220 2.222227 TGTCTCCTGCTCTCAGCTAA 57.778 50.000 0.00 0.00 42.97 3.09
220 221 2.744760 TGTCTCCTGCTCTCAGCTAAT 58.255 47.619 0.00 0.00 42.97 1.73
221 222 3.102972 TGTCTCCTGCTCTCAGCTAATT 58.897 45.455 0.00 0.00 42.97 1.40
222 223 3.517100 TGTCTCCTGCTCTCAGCTAATTT 59.483 43.478 0.00 0.00 42.97 1.82
223 224 4.711846 TGTCTCCTGCTCTCAGCTAATTTA 59.288 41.667 0.00 0.00 42.97 1.40
224 225 5.163468 TGTCTCCTGCTCTCAGCTAATTTAG 60.163 44.000 0.00 0.00 42.97 1.85
225 226 4.343526 TCTCCTGCTCTCAGCTAATTTAGG 59.656 45.833 5.61 0.00 42.97 2.69
226 227 4.290093 TCCTGCTCTCAGCTAATTTAGGA 58.710 43.478 5.61 0.00 42.97 2.94
227 228 4.904251 TCCTGCTCTCAGCTAATTTAGGAT 59.096 41.667 5.61 0.00 42.97 3.24
228 229 5.367937 TCCTGCTCTCAGCTAATTTAGGATT 59.632 40.000 5.61 0.00 42.97 3.01
229 230 6.060788 CCTGCTCTCAGCTAATTTAGGATTT 58.939 40.000 5.61 0.00 42.97 2.17
230 231 6.204495 CCTGCTCTCAGCTAATTTAGGATTTC 59.796 42.308 5.61 0.00 42.97 2.17
231 232 5.755375 TGCTCTCAGCTAATTTAGGATTTCG 59.245 40.000 5.61 0.00 42.97 3.46
232 233 5.755861 GCTCTCAGCTAATTTAGGATTTCGT 59.244 40.000 5.61 0.00 38.45 3.85
233 234 6.924060 GCTCTCAGCTAATTTAGGATTTCGTA 59.076 38.462 5.61 0.00 38.45 3.43
234 235 7.600752 GCTCTCAGCTAATTTAGGATTTCGTAT 59.399 37.037 5.61 0.00 38.45 3.06
235 236 9.482627 CTCTCAGCTAATTTAGGATTTCGTATT 57.517 33.333 5.61 0.00 0.00 1.89
250 251 9.909644 GGATTTCGTATTATAACTAGAGAAGCA 57.090 33.333 0.00 0.00 0.00 3.91
287 288 8.867935 TGTGTATTATTTTGTACATGCATTTGC 58.132 29.630 0.00 0.00 42.50 3.68
309 310 5.313520 CACACATGCATATTTTCAGGTCA 57.686 39.130 0.00 0.00 0.00 4.02
310 311 5.337554 CACACATGCATATTTTCAGGTCAG 58.662 41.667 0.00 0.00 0.00 3.51
311 312 5.124297 CACACATGCATATTTTCAGGTCAGA 59.876 40.000 0.00 0.00 0.00 3.27
312 313 5.889853 ACACATGCATATTTTCAGGTCAGAT 59.110 36.000 0.00 0.00 0.00 2.90
313 314 6.379133 ACACATGCATATTTTCAGGTCAGATT 59.621 34.615 0.00 0.00 0.00 2.40
314 315 7.093640 ACACATGCATATTTTCAGGTCAGATTT 60.094 33.333 0.00 0.00 0.00 2.17
315 316 7.222031 CACATGCATATTTTCAGGTCAGATTTG 59.778 37.037 0.00 0.00 0.00 2.32
316 317 5.653507 TGCATATTTTCAGGTCAGATTTGC 58.346 37.500 0.00 0.00 0.00 3.68
317 318 5.045872 GCATATTTTCAGGTCAGATTTGCC 58.954 41.667 0.00 0.00 0.00 4.52
318 319 5.394443 GCATATTTTCAGGTCAGATTTGCCA 60.394 40.000 0.80 0.00 0.00 4.92
319 320 6.684613 GCATATTTTCAGGTCAGATTTGCCAT 60.685 38.462 0.80 0.00 0.00 4.40
320 321 4.524316 TTTTCAGGTCAGATTTGCCATG 57.476 40.909 0.00 0.00 0.00 3.66
321 322 2.885135 TCAGGTCAGATTTGCCATGT 57.115 45.000 0.00 0.00 0.00 3.21
322 323 2.439409 TCAGGTCAGATTTGCCATGTG 58.561 47.619 0.00 0.00 0.00 3.21
323 324 1.135199 CAGGTCAGATTTGCCATGTGC 60.135 52.381 0.00 0.00 41.77 4.57
324 325 1.180029 GGTCAGATTTGCCATGTGCT 58.820 50.000 7.54 0.00 42.00 4.40
325 326 1.133790 GGTCAGATTTGCCATGTGCTC 59.866 52.381 7.54 0.00 42.00 4.26
326 327 2.089980 GTCAGATTTGCCATGTGCTCT 58.910 47.619 7.54 0.69 42.00 4.09
327 328 2.089201 TCAGATTTGCCATGTGCTCTG 58.911 47.619 13.22 13.22 39.77 3.35
328 329 1.816835 CAGATTTGCCATGTGCTCTGT 59.183 47.619 12.05 0.00 42.00 3.41
329 330 2.230508 CAGATTTGCCATGTGCTCTGTT 59.769 45.455 12.05 0.00 42.00 3.16
330 331 2.895404 AGATTTGCCATGTGCTCTGTTT 59.105 40.909 7.54 0.00 42.00 2.83
331 332 2.512485 TTTGCCATGTGCTCTGTTTG 57.488 45.000 7.54 0.00 42.00 2.93
332 333 0.032403 TTGCCATGTGCTCTGTTTGC 59.968 50.000 7.54 0.00 42.00 3.68
333 334 1.080298 GCCATGTGCTCTGTTTGCC 60.080 57.895 0.00 0.00 36.87 4.52
334 335 1.808531 GCCATGTGCTCTGTTTGCCA 61.809 55.000 0.00 0.00 36.87 4.92
335 336 0.038892 CCATGTGCTCTGTTTGCCAC 60.039 55.000 0.00 0.00 0.00 5.01
336 337 0.038892 CATGTGCTCTGTTTGCCACC 60.039 55.000 0.00 0.00 0.00 4.61
337 338 0.467844 ATGTGCTCTGTTTGCCACCA 60.468 50.000 0.00 0.00 0.00 4.17
338 339 0.682532 TGTGCTCTGTTTGCCACCAA 60.683 50.000 0.00 0.00 0.00 3.67
339 340 0.459489 GTGCTCTGTTTGCCACCAAA 59.541 50.000 0.00 0.00 38.56 3.28
340 341 0.746063 TGCTCTGTTTGCCACCAAAG 59.254 50.000 0.00 0.00 41.32 2.77
341 342 0.746659 GCTCTGTTTGCCACCAAAGT 59.253 50.000 0.00 0.00 41.32 2.66
342 343 1.536709 GCTCTGTTTGCCACCAAAGTG 60.537 52.381 0.00 0.00 41.32 3.16
351 352 4.599036 ACCAAAGTGAAGTGCCCC 57.401 55.556 0.00 0.00 0.00 5.80
352 353 1.930520 ACCAAAGTGAAGTGCCCCT 59.069 52.632 0.00 0.00 0.00 4.79
353 354 0.261696 ACCAAAGTGAAGTGCCCCTT 59.738 50.000 0.00 0.00 35.59 3.95
364 365 5.316327 GAAGTGCCCCTTCTTATTTTCAG 57.684 43.478 6.09 0.00 45.19 3.02
365 366 4.657814 AGTGCCCCTTCTTATTTTCAGA 57.342 40.909 0.00 0.00 0.00 3.27
366 367 4.336280 AGTGCCCCTTCTTATTTTCAGAC 58.664 43.478 0.00 0.00 0.00 3.51
367 368 4.043435 AGTGCCCCTTCTTATTTTCAGACT 59.957 41.667 0.00 0.00 0.00 3.24
368 369 5.250774 AGTGCCCCTTCTTATTTTCAGACTA 59.749 40.000 0.00 0.00 0.00 2.59
369 370 6.069381 AGTGCCCCTTCTTATTTTCAGACTAT 60.069 38.462 0.00 0.00 0.00 2.12
370 371 6.038714 GTGCCCCTTCTTATTTTCAGACTATG 59.961 42.308 0.00 0.00 0.00 2.23
371 372 6.069673 TGCCCCTTCTTATTTTCAGACTATGA 60.070 38.462 0.00 0.00 35.62 2.15
372 373 7.001073 GCCCCTTCTTATTTTCAGACTATGAT 58.999 38.462 0.00 0.00 37.89 2.45
373 374 7.503902 GCCCCTTCTTATTTTCAGACTATGATT 59.496 37.037 0.00 0.00 37.89 2.57
374 375 9.413734 CCCCTTCTTATTTTCAGACTATGATTT 57.586 33.333 0.00 0.00 37.89 2.17
400 401 9.796120 TGAAGTTTTGTTTAATAGTCCTGTTTG 57.204 29.630 0.00 0.00 0.00 2.93
401 402 9.797556 GAAGTTTTGTTTAATAGTCCTGTTTGT 57.202 29.630 0.00 0.00 0.00 2.83
411 412 9.967451 TTAATAGTCCTGTTTGTATTTCATGGA 57.033 29.630 0.00 0.00 0.00 3.41
412 413 7.865706 ATAGTCCTGTTTGTATTTCATGGAC 57.134 36.000 0.00 0.00 41.95 4.02
413 414 5.880901 AGTCCTGTTTGTATTTCATGGACT 58.119 37.500 0.00 0.00 45.45 3.85
414 415 5.942872 GTCCTGTTTGTATTTCATGGACTG 58.057 41.667 0.00 0.00 39.47 3.51
415 416 5.473504 GTCCTGTTTGTATTTCATGGACTGT 59.526 40.000 0.00 0.00 39.47 3.55
416 417 6.653320 GTCCTGTTTGTATTTCATGGACTGTA 59.347 38.462 0.00 0.00 39.47 2.74
417 418 7.336931 GTCCTGTTTGTATTTCATGGACTGTAT 59.663 37.037 0.00 0.00 39.47 2.29
418 419 7.552687 TCCTGTTTGTATTTCATGGACTGTATC 59.447 37.037 0.00 0.00 0.00 2.24
419 420 7.554118 CCTGTTTGTATTTCATGGACTGTATCT 59.446 37.037 0.00 0.00 0.00 1.98
420 421 9.599866 CTGTTTGTATTTCATGGACTGTATCTA 57.400 33.333 0.00 0.00 0.00 1.98
430 431 9.547279 TTCATGGACTGTATCTATATACCATGT 57.453 33.333 17.59 3.49 36.68 3.21
431 432 9.547279 TCATGGACTGTATCTATATACCATGTT 57.453 33.333 17.59 0.00 36.68 2.71
447 448 6.267496 ACCATGTTAAAAGCAGATGTAACC 57.733 37.500 0.00 0.00 0.00 2.85
448 449 6.010219 ACCATGTTAAAAGCAGATGTAACCT 58.990 36.000 0.00 0.00 0.00 3.50
449 450 6.151144 ACCATGTTAAAAGCAGATGTAACCTC 59.849 38.462 0.00 0.00 0.00 3.85
450 451 6.150976 CCATGTTAAAAGCAGATGTAACCTCA 59.849 38.462 0.00 0.00 0.00 3.86
451 452 7.148018 CCATGTTAAAAGCAGATGTAACCTCAT 60.148 37.037 0.00 0.00 0.00 2.90
452 453 7.759489 TGTTAAAAGCAGATGTAACCTCATT 57.241 32.000 0.00 0.00 0.00 2.57
453 454 8.177119 TGTTAAAAGCAGATGTAACCTCATTT 57.823 30.769 0.00 0.00 0.00 2.32
454 455 9.290988 TGTTAAAAGCAGATGTAACCTCATTTA 57.709 29.630 0.00 0.00 0.00 1.40
459 460 9.860898 AAAGCAGATGTAACCTCATTTATTTTC 57.139 29.630 0.00 0.00 0.00 2.29
460 461 8.579850 AGCAGATGTAACCTCATTTATTTTCA 57.420 30.769 0.00 0.00 0.00 2.69
461 462 8.462016 AGCAGATGTAACCTCATTTATTTTCAC 58.538 33.333 0.00 0.00 0.00 3.18
462 463 8.243426 GCAGATGTAACCTCATTTATTTTCACA 58.757 33.333 0.00 0.00 0.00 3.58
495 496 7.573968 AAATGCCTCTTCACTATATCAAACC 57.426 36.000 0.00 0.00 0.00 3.27
496 497 4.693283 TGCCTCTTCACTATATCAAACCG 58.307 43.478 0.00 0.00 0.00 4.44
497 498 4.404394 TGCCTCTTCACTATATCAAACCGA 59.596 41.667 0.00 0.00 0.00 4.69
498 499 5.070446 TGCCTCTTCACTATATCAAACCGAT 59.930 40.000 0.00 0.00 38.21 4.18
499 500 5.635700 GCCTCTTCACTATATCAAACCGATC 59.364 44.000 0.00 0.00 35.39 3.69
500 501 6.517529 GCCTCTTCACTATATCAAACCGATCT 60.518 42.308 0.00 0.00 35.39 2.75
501 502 7.437748 CCTCTTCACTATATCAAACCGATCTT 58.562 38.462 0.00 0.00 35.39 2.40
502 503 7.928706 CCTCTTCACTATATCAAACCGATCTTT 59.071 37.037 0.00 0.00 35.39 2.52
503 504 8.873215 TCTTCACTATATCAAACCGATCTTTC 57.127 34.615 0.00 0.00 35.39 2.62
504 505 8.696374 TCTTCACTATATCAAACCGATCTTTCT 58.304 33.333 0.00 0.00 35.39 2.52
505 506 8.873215 TTCACTATATCAAACCGATCTTTCTC 57.127 34.615 0.00 0.00 35.39 2.87
506 507 8.239038 TCACTATATCAAACCGATCTTTCTCT 57.761 34.615 0.00 0.00 35.39 3.10
507 508 9.350951 TCACTATATCAAACCGATCTTTCTCTA 57.649 33.333 0.00 0.00 35.39 2.43
512 513 5.352284 TCAAACCGATCTTTCTCTATGAGC 58.648 41.667 0.00 0.00 0.00 4.26
513 514 4.329462 AACCGATCTTTCTCTATGAGCC 57.671 45.455 0.00 0.00 0.00 4.70
514 515 3.571590 ACCGATCTTTCTCTATGAGCCT 58.428 45.455 0.00 0.00 0.00 4.58
515 516 3.320541 ACCGATCTTTCTCTATGAGCCTG 59.679 47.826 0.00 0.00 0.00 4.85
516 517 3.316283 CGATCTTTCTCTATGAGCCTGC 58.684 50.000 0.00 0.00 0.00 4.85
517 518 3.243670 CGATCTTTCTCTATGAGCCTGCA 60.244 47.826 0.00 0.00 0.00 4.41
518 519 3.815856 TCTTTCTCTATGAGCCTGCAG 57.184 47.619 6.78 6.78 0.00 4.41
519 520 3.102972 TCTTTCTCTATGAGCCTGCAGT 58.897 45.455 13.81 0.00 0.00 4.40
520 521 3.517100 TCTTTCTCTATGAGCCTGCAGTT 59.483 43.478 13.81 0.00 0.00 3.16
521 522 3.988976 TTCTCTATGAGCCTGCAGTTT 57.011 42.857 13.81 0.00 0.00 2.66
522 523 3.257469 TCTCTATGAGCCTGCAGTTTG 57.743 47.619 13.81 0.00 0.00 2.93
523 524 2.568956 TCTCTATGAGCCTGCAGTTTGT 59.431 45.455 13.81 0.00 0.00 2.83
524 525 2.676839 CTCTATGAGCCTGCAGTTTGTG 59.323 50.000 13.81 0.00 0.00 3.33
525 526 2.302733 TCTATGAGCCTGCAGTTTGTGA 59.697 45.455 13.81 0.00 0.00 3.58
526 527 2.211250 ATGAGCCTGCAGTTTGTGAT 57.789 45.000 13.81 0.00 0.00 3.06
527 528 1.241165 TGAGCCTGCAGTTTGTGATG 58.759 50.000 13.81 0.00 0.00 3.07
528 529 1.242076 GAGCCTGCAGTTTGTGATGT 58.758 50.000 13.81 0.00 0.00 3.06
529 530 1.610522 GAGCCTGCAGTTTGTGATGTT 59.389 47.619 13.81 0.00 0.00 2.71
530 531 1.338973 AGCCTGCAGTTTGTGATGTTG 59.661 47.619 13.81 0.00 0.00 3.33
531 532 1.067516 GCCTGCAGTTTGTGATGTTGT 59.932 47.619 13.81 0.00 0.00 3.32
532 533 2.293122 GCCTGCAGTTTGTGATGTTGTA 59.707 45.455 13.81 0.00 0.00 2.41
533 534 3.243367 GCCTGCAGTTTGTGATGTTGTAA 60.243 43.478 13.81 0.00 0.00 2.41
534 535 4.559300 GCCTGCAGTTTGTGATGTTGTAAT 60.559 41.667 13.81 0.00 0.00 1.89
535 536 5.531634 CCTGCAGTTTGTGATGTTGTAATT 58.468 37.500 13.81 0.00 0.00 1.40
536 537 5.984926 CCTGCAGTTTGTGATGTTGTAATTT 59.015 36.000 13.81 0.00 0.00 1.82
537 538 6.479660 CCTGCAGTTTGTGATGTTGTAATTTT 59.520 34.615 13.81 0.00 0.00 1.82
538 539 7.306749 CCTGCAGTTTGTGATGTTGTAATTTTC 60.307 37.037 13.81 0.00 0.00 2.29
539 540 6.478344 TGCAGTTTGTGATGTTGTAATTTTCC 59.522 34.615 0.00 0.00 0.00 3.13
540 541 6.701400 GCAGTTTGTGATGTTGTAATTTTCCT 59.299 34.615 0.00 0.00 0.00 3.36
541 542 7.224557 GCAGTTTGTGATGTTGTAATTTTCCTT 59.775 33.333 0.00 0.00 0.00 3.36
542 543 9.097257 CAGTTTGTGATGTTGTAATTTTCCTTT 57.903 29.630 0.00 0.00 0.00 3.11
545 546 9.757227 TTTGTGATGTTGTAATTTTCCTTTAGG 57.243 29.630 0.00 0.00 0.00 2.69
546 547 7.375053 TGTGATGTTGTAATTTTCCTTTAGGC 58.625 34.615 0.00 0.00 34.44 3.93
547 548 7.014711 TGTGATGTTGTAATTTTCCTTTAGGCA 59.985 33.333 0.00 0.00 34.44 4.75
548 549 7.870445 GTGATGTTGTAATTTTCCTTTAGGCAA 59.130 33.333 0.00 0.00 34.44 4.52
549 550 8.424918 TGATGTTGTAATTTTCCTTTAGGCAAA 58.575 29.630 0.00 0.00 34.97 3.68
550 551 9.435688 GATGTTGTAATTTTCCTTTAGGCAAAT 57.564 29.630 1.24 1.24 41.60 2.32
559 560 9.710900 ATTTTCCTTTAGGCAAATAAACTGAAG 57.289 29.630 4.84 0.00 38.84 3.02
560 561 8.472007 TTTCCTTTAGGCAAATAAACTGAAGA 57.528 30.769 0.00 0.00 31.69 2.87
561 562 8.472007 TTCCTTTAGGCAAATAAACTGAAGAA 57.528 30.769 0.00 0.00 31.69 2.52
562 563 8.472007 TCCTTTAGGCAAATAAACTGAAGAAA 57.528 30.769 0.00 0.00 31.69 2.52
563 564 8.919145 TCCTTTAGGCAAATAAACTGAAGAAAA 58.081 29.630 0.00 0.00 31.69 2.29
564 565 9.541143 CCTTTAGGCAAATAAACTGAAGAAAAA 57.459 29.630 0.00 0.00 31.69 1.94
587 588 3.441572 ACATTCTATGTTGAGCACCTTGC 59.558 43.478 0.00 0.00 41.63 4.01
588 589 5.048516 ACATTCTATGTTGAGCACCTTGCA 61.049 41.667 0.22 0.00 43.32 4.08
589 590 6.498309 ACATTCTATGTTGAGCACCTTGCAA 61.498 40.000 0.00 0.00 43.32 4.08
590 591 7.913657 ACATTCTATGTTGAGCACCTTGCAAA 61.914 38.462 0.00 0.00 43.32 3.68
591 592 9.598716 ACATTCTATGTTGAGCACCTTGCAAAG 62.599 40.741 0.00 0.00 43.32 2.77
617 618 8.391075 GCATATTTAGTAATGCCCTTCTTACA 57.609 34.615 0.00 0.00 34.23 2.41
618 619 8.290325 GCATATTTAGTAATGCCCTTCTTACAC 58.710 37.037 0.00 0.00 34.23 2.90
619 620 9.337396 CATATTTAGTAATGCCCTTCTTACACA 57.663 33.333 0.00 0.00 31.64 3.72
620 621 7.865706 ATTTAGTAATGCCCTTCTTACACAG 57.134 36.000 0.00 0.00 31.64 3.66
621 622 6.614694 TTAGTAATGCCCTTCTTACACAGA 57.385 37.500 0.00 0.00 31.64 3.41
622 623 5.700402 AGTAATGCCCTTCTTACACAGAT 57.300 39.130 0.00 0.00 31.64 2.90
623 624 5.675538 AGTAATGCCCTTCTTACACAGATC 58.324 41.667 0.00 0.00 31.64 2.75
624 625 4.574674 AATGCCCTTCTTACACAGATCA 57.425 40.909 0.00 0.00 0.00 2.92
625 626 3.616956 TGCCCTTCTTACACAGATCAG 57.383 47.619 0.00 0.00 0.00 2.90
626 627 3.173151 TGCCCTTCTTACACAGATCAGA 58.827 45.455 0.00 0.00 0.00 3.27
627 628 3.055819 TGCCCTTCTTACACAGATCAGAC 60.056 47.826 0.00 0.00 0.00 3.51
628 629 3.196685 GCCCTTCTTACACAGATCAGACT 59.803 47.826 0.00 0.00 0.00 3.24
629 630 4.753233 CCCTTCTTACACAGATCAGACTG 58.247 47.826 0.00 0.00 42.78 3.51
630 631 4.382470 CCCTTCTTACACAGATCAGACTGG 60.382 50.000 1.81 0.00 41.59 4.00
631 632 3.876274 TCTTACACAGATCAGACTGGC 57.124 47.619 1.81 0.00 41.59 4.85
632 633 2.164422 TCTTACACAGATCAGACTGGCG 59.836 50.000 1.81 0.00 41.59 5.69
633 634 1.834188 TACACAGATCAGACTGGCGA 58.166 50.000 1.81 0.00 41.59 5.54
634 635 1.189752 ACACAGATCAGACTGGCGAT 58.810 50.000 1.81 0.00 41.59 4.58
635 636 1.552337 ACACAGATCAGACTGGCGATT 59.448 47.619 1.81 0.00 41.59 3.34
636 637 1.931841 CACAGATCAGACTGGCGATTG 59.068 52.381 1.81 0.00 41.59 2.67
637 638 1.827344 ACAGATCAGACTGGCGATTGA 59.173 47.619 1.81 0.00 41.59 2.57
638 639 2.234661 ACAGATCAGACTGGCGATTGAA 59.765 45.455 1.81 0.00 41.59 2.69
639 640 2.864946 CAGATCAGACTGGCGATTGAAG 59.135 50.000 1.81 0.00 34.64 3.02
640 641 1.596727 GATCAGACTGGCGATTGAAGC 59.403 52.381 1.81 0.00 0.00 3.86
641 642 0.610174 TCAGACTGGCGATTGAAGCT 59.390 50.000 1.81 0.00 34.52 3.74
642 643 1.002430 TCAGACTGGCGATTGAAGCTT 59.998 47.619 0.00 0.00 34.52 3.74
643 644 1.129998 CAGACTGGCGATTGAAGCTTG 59.870 52.381 2.10 0.00 34.52 4.01
644 645 0.179179 GACTGGCGATTGAAGCTTGC 60.179 55.000 2.10 0.00 34.52 4.01
645 646 1.138247 CTGGCGATTGAAGCTTGCC 59.862 57.895 15.92 15.92 42.62 4.52
646 647 1.303561 TGGCGATTGAAGCTTGCCT 60.304 52.632 21.43 0.00 42.73 4.75
647 648 1.308069 TGGCGATTGAAGCTTGCCTC 61.308 55.000 21.43 7.32 42.73 4.70
648 649 1.028868 GGCGATTGAAGCTTGCCTCT 61.029 55.000 15.60 0.00 39.68 3.69
649 650 0.376502 GCGATTGAAGCTTGCCTCTC 59.623 55.000 2.10 0.00 0.00 3.20
650 651 2.011046 GCGATTGAAGCTTGCCTCTCT 61.011 52.381 2.10 0.00 0.00 3.10
651 652 1.664659 CGATTGAAGCTTGCCTCTCTG 59.335 52.381 2.10 0.00 0.00 3.35
652 653 2.709213 GATTGAAGCTTGCCTCTCTGT 58.291 47.619 2.10 0.00 0.00 3.41
653 654 2.175878 TTGAAGCTTGCCTCTCTGTC 57.824 50.000 2.10 0.00 0.00 3.51
654 655 1.051008 TGAAGCTTGCCTCTCTGTCA 58.949 50.000 2.10 0.00 0.00 3.58
655 656 1.627329 TGAAGCTTGCCTCTCTGTCAT 59.373 47.619 2.10 0.00 0.00 3.06
656 657 2.008329 GAAGCTTGCCTCTCTGTCATG 58.992 52.381 2.10 0.00 0.00 3.07
657 658 0.982704 AGCTTGCCTCTCTGTCATGT 59.017 50.000 0.00 0.00 0.00 3.21
658 659 1.085091 GCTTGCCTCTCTGTCATGTG 58.915 55.000 0.00 0.00 0.00 3.21
659 660 1.085091 CTTGCCTCTCTGTCATGTGC 58.915 55.000 0.00 0.00 0.00 4.57
660 661 0.689055 TTGCCTCTCTGTCATGTGCT 59.311 50.000 0.00 0.00 0.00 4.40
661 662 0.689055 TGCCTCTCTGTCATGTGCTT 59.311 50.000 0.00 0.00 0.00 3.91
662 663 1.901833 TGCCTCTCTGTCATGTGCTTA 59.098 47.619 0.00 0.00 0.00 3.09
663 664 2.502947 TGCCTCTCTGTCATGTGCTTAT 59.497 45.455 0.00 0.00 0.00 1.73
664 665 3.706086 TGCCTCTCTGTCATGTGCTTATA 59.294 43.478 0.00 0.00 0.00 0.98
665 666 4.346127 TGCCTCTCTGTCATGTGCTTATAT 59.654 41.667 0.00 0.00 0.00 0.86
666 667 4.928615 GCCTCTCTGTCATGTGCTTATATC 59.071 45.833 0.00 0.00 0.00 1.63
667 668 5.159925 CCTCTCTGTCATGTGCTTATATCG 58.840 45.833 0.00 0.00 0.00 2.92
668 669 5.048434 CCTCTCTGTCATGTGCTTATATCGA 60.048 44.000 0.00 0.00 0.00 3.59
669 670 6.006759 TCTCTGTCATGTGCTTATATCGAG 57.993 41.667 0.00 0.00 0.00 4.04
670 671 5.048434 TCTCTGTCATGTGCTTATATCGAGG 60.048 44.000 0.00 0.00 0.00 4.63
671 672 4.584743 TCTGTCATGTGCTTATATCGAGGT 59.415 41.667 0.00 0.00 0.00 3.85
672 673 4.620982 TGTCATGTGCTTATATCGAGGTG 58.379 43.478 0.00 0.00 0.00 4.00
673 674 3.990469 GTCATGTGCTTATATCGAGGTGG 59.010 47.826 0.00 0.00 0.00 4.61
674 675 3.895041 TCATGTGCTTATATCGAGGTGGA 59.105 43.478 0.00 0.00 0.00 4.02
675 676 3.728076 TGTGCTTATATCGAGGTGGAC 57.272 47.619 0.00 0.00 0.00 4.02
676 677 3.028130 TGTGCTTATATCGAGGTGGACA 58.972 45.455 0.00 0.00 0.00 4.02
677 678 3.181479 TGTGCTTATATCGAGGTGGACAC 60.181 47.826 0.00 0.00 0.00 3.67
678 679 3.028130 TGCTTATATCGAGGTGGACACA 58.972 45.455 4.69 0.00 0.00 3.72
679 680 3.641436 TGCTTATATCGAGGTGGACACAT 59.359 43.478 4.69 0.00 0.00 3.21
680 681 4.238514 GCTTATATCGAGGTGGACACATC 58.761 47.826 7.01 7.01 38.61 3.06
681 682 4.021894 GCTTATATCGAGGTGGACACATCT 60.022 45.833 14.14 0.66 41.88 2.90
682 683 5.183331 GCTTATATCGAGGTGGACACATCTA 59.817 44.000 14.14 4.84 38.44 1.98
683 684 6.623986 GCTTATATCGAGGTGGACACATCTAG 60.624 46.154 14.14 1.43 38.44 2.43
684 685 1.103803 TCGAGGTGGACACATCTAGC 58.896 55.000 14.14 0.00 38.44 3.42
685 686 1.107114 CGAGGTGGACACATCTAGCT 58.893 55.000 14.14 0.00 45.82 3.32
686 687 2.092592 TCGAGGTGGACACATCTAGCTA 60.093 50.000 14.14 0.00 43.48 3.32
687 688 2.033550 CGAGGTGGACACATCTAGCTAC 59.966 54.545 14.14 0.00 43.48 3.58
688 689 2.362717 GAGGTGGACACATCTAGCTACC 59.637 54.545 9.60 0.00 43.48 3.18
689 690 2.108168 GGTGGACACATCTAGCTACCA 58.892 52.381 4.69 0.00 31.52 3.25
690 691 2.500098 GGTGGACACATCTAGCTACCAA 59.500 50.000 4.69 0.00 31.52 3.67
691 692 3.430929 GGTGGACACATCTAGCTACCAAG 60.431 52.174 4.69 0.00 31.52 3.61
692 693 3.447586 GTGGACACATCTAGCTACCAAGA 59.552 47.826 0.00 0.00 0.00 3.02
693 694 4.081642 GTGGACACATCTAGCTACCAAGAA 60.082 45.833 0.00 0.00 0.00 2.52
694 695 4.160439 TGGACACATCTAGCTACCAAGAAG 59.840 45.833 0.00 0.00 0.00 2.85
695 696 4.442192 GGACACATCTAGCTACCAAGAAGG 60.442 50.000 0.00 0.00 45.67 3.46
696 697 3.452627 ACACATCTAGCTACCAAGAAGGG 59.547 47.826 0.00 0.00 43.89 3.95
697 698 2.436173 ACATCTAGCTACCAAGAAGGGC 59.564 50.000 0.00 0.00 43.89 5.19
698 699 1.112113 TCTAGCTACCAAGAAGGGCG 58.888 55.000 0.00 0.00 43.89 6.13
699 700 0.824759 CTAGCTACCAAGAAGGGCGT 59.175 55.000 0.00 0.00 43.89 5.68
700 701 1.207329 CTAGCTACCAAGAAGGGCGTT 59.793 52.381 0.00 0.00 43.89 4.84
701 702 0.400594 AGCTACCAAGAAGGGCGTTT 59.599 50.000 0.00 0.00 43.89 3.60
702 703 0.521735 GCTACCAAGAAGGGCGTTTG 59.478 55.000 0.00 0.00 43.89 2.93
703 704 0.521735 CTACCAAGAAGGGCGTTTGC 59.478 55.000 0.00 0.00 43.89 3.68
716 717 3.942539 GCGTTTGCCAAAATTTCAGTT 57.057 38.095 0.00 0.00 33.98 3.16
717 718 4.271590 GCGTTTGCCAAAATTTCAGTTT 57.728 36.364 0.00 0.00 33.98 2.66
718 719 5.396750 GCGTTTGCCAAAATTTCAGTTTA 57.603 34.783 0.00 0.00 33.98 2.01
719 720 5.431309 GCGTTTGCCAAAATTTCAGTTTAG 58.569 37.500 0.00 0.00 33.98 1.85
720 721 5.233263 GCGTTTGCCAAAATTTCAGTTTAGA 59.767 36.000 0.00 0.00 33.98 2.10
721 722 6.073819 GCGTTTGCCAAAATTTCAGTTTAGAT 60.074 34.615 0.00 0.00 33.98 1.98
722 723 7.501515 CGTTTGCCAAAATTTCAGTTTAGATC 58.498 34.615 0.00 0.00 0.00 2.75
723 724 7.168972 CGTTTGCCAAAATTTCAGTTTAGATCA 59.831 33.333 0.00 0.00 0.00 2.92
724 725 8.825745 GTTTGCCAAAATTTCAGTTTAGATCAA 58.174 29.630 0.00 0.00 0.00 2.57
725 726 9.558396 TTTGCCAAAATTTCAGTTTAGATCAAT 57.442 25.926 0.00 0.00 0.00 2.57
726 727 9.558396 TTGCCAAAATTTCAGTTTAGATCAATT 57.442 25.926 0.00 0.00 0.00 2.32
759 760 6.882610 ACATGACATGTTATTGTGACAACT 57.117 33.333 15.48 0.00 41.63 3.16
760 761 7.977789 ACATGACATGTTATTGTGACAACTA 57.022 32.000 15.48 0.00 41.63 2.24
761 762 8.565896 ACATGACATGTTATTGTGACAACTAT 57.434 30.769 15.48 0.00 41.63 2.12
762 763 9.013229 ACATGACATGTTATTGTGACAACTATT 57.987 29.630 15.48 0.00 41.63 1.73
763 764 9.281075 CATGACATGTTATTGTGACAACTATTG 57.719 33.333 0.00 0.00 0.00 1.90
765 766 8.288913 TGACATGTTATTGTGACAACTATTGTG 58.711 33.333 0.00 0.00 45.52 3.33
766 767 8.389779 ACATGTTATTGTGACAACTATTGTGA 57.610 30.769 0.00 0.00 45.52 3.58
767 768 8.289618 ACATGTTATTGTGACAACTATTGTGAC 58.710 33.333 0.00 4.58 46.09 3.67
768 769 8.506437 CATGTTATTGTGACAACTATTGTGACT 58.494 33.333 0.00 0.00 46.07 3.41
769 770 7.860613 TGTTATTGTGACAACTATTGTGACTG 58.139 34.615 0.00 0.00 46.07 3.51
770 771 7.713073 TGTTATTGTGACAACTATTGTGACTGA 59.287 33.333 0.00 2.74 46.07 3.41
771 772 8.556194 GTTATTGTGACAACTATTGTGACTGAA 58.444 33.333 0.00 1.00 46.07 3.02
772 773 6.993786 TTGTGACAACTATTGTGACTGAAA 57.006 33.333 11.63 0.00 46.07 2.69
773 774 6.993786 TGTGACAACTATTGTGACTGAAAA 57.006 33.333 11.63 0.00 46.07 2.29
774 775 7.384439 TGTGACAACTATTGTGACTGAAAAA 57.616 32.000 11.63 0.00 46.07 1.94
775 776 7.995289 TGTGACAACTATTGTGACTGAAAAAT 58.005 30.769 11.63 0.00 46.07 1.82
776 777 8.128582 TGTGACAACTATTGTGACTGAAAAATC 58.871 33.333 11.63 0.00 46.07 2.17
777 778 8.128582 GTGACAACTATTGTGACTGAAAAATCA 58.871 33.333 4.33 0.00 45.52 2.57
778 779 8.681806 TGACAACTATTGTGACTGAAAAATCAA 58.318 29.630 0.00 0.00 45.52 2.57
779 780 9.683069 GACAACTATTGTGACTGAAAAATCAAT 57.317 29.630 0.00 0.00 45.52 2.57
806 807 9.753674 TCAATTGAGGTACATTAAGAAATTCCT 57.246 29.630 3.38 0.00 0.00 3.36
826 827 9.834628 AATTCCTAAAATTACATGTGTTACACG 57.165 29.630 9.11 0.00 37.14 4.49
827 828 7.966246 TCCTAAAATTACATGTGTTACACGT 57.034 32.000 9.11 7.76 37.14 4.49
832 833 3.343463 CATGTGTTACACGTGCACG 57.657 52.632 35.99 35.99 43.02 5.34
833 834 0.721155 CATGTGTTACACGTGCACGC 60.721 55.000 37.35 21.62 43.02 5.34
834 835 0.878523 ATGTGTTACACGTGCACGCT 60.879 50.000 37.35 24.93 44.43 5.07
835 836 1.084935 TGTGTTACACGTGCACGCTT 61.085 50.000 37.35 26.23 44.43 4.68
836 837 0.854062 GTGTTACACGTGCACGCTTA 59.146 50.000 37.35 25.15 44.43 3.09
837 838 1.458064 GTGTTACACGTGCACGCTTAT 59.542 47.619 37.35 22.28 44.43 1.73
838 839 2.096614 GTGTTACACGTGCACGCTTATT 60.097 45.455 37.35 16.56 44.43 1.40
839 840 3.121611 GTGTTACACGTGCACGCTTATTA 59.878 43.478 37.35 18.50 44.43 0.98
840 841 3.365520 TGTTACACGTGCACGCTTATTAG 59.634 43.478 37.35 20.05 44.43 1.73
841 842 2.074547 ACACGTGCACGCTTATTAGT 57.925 45.000 37.35 20.66 44.43 2.24
842 843 1.724623 ACACGTGCACGCTTATTAGTG 59.275 47.619 37.35 26.29 44.43 2.74
843 844 1.060553 CACGTGCACGCTTATTAGTGG 59.939 52.381 37.35 8.78 44.43 4.00
844 845 1.067425 ACGTGCACGCTTATTAGTGGA 60.067 47.619 37.35 0.00 44.43 4.02
845 846 1.588404 CGTGCACGCTTATTAGTGGAG 59.412 52.381 28.16 0.00 39.29 3.86
846 847 2.734175 CGTGCACGCTTATTAGTGGAGA 60.734 50.000 28.16 0.00 39.29 3.71
1636 1637 3.460868 CATGCCGGCCTTTTCCCC 61.461 66.667 26.77 0.00 0.00 4.81
1824 1825 1.546323 GGTGCATAGGCTGGCATACAT 60.546 52.381 16.89 0.00 42.75 2.29
1855 1856 1.264749 AAGGTGCCCGCTGTCTGATA 61.265 55.000 0.00 0.00 0.00 2.15
1973 2367 1.047596 GCTGCTGGAGGAGATGGAGA 61.048 60.000 0.00 0.00 35.31 3.71
1980 2374 1.198713 GAGGAGATGGAGAGTGGCAA 58.801 55.000 0.00 0.00 0.00 4.52
1982 2376 0.908198 GGAGATGGAGAGTGGCAAGT 59.092 55.000 0.00 0.00 0.00 3.16
1984 2378 2.354259 GAGATGGAGAGTGGCAAGTTG 58.646 52.381 0.00 0.00 0.00 3.16
2146 2540 3.573967 GGACACTGATTGATGGGTTTTGT 59.426 43.478 0.00 0.00 0.00 2.83
2149 2543 2.964464 ACTGATTGATGGGTTTTGTGCA 59.036 40.909 0.00 0.00 0.00 4.57
2215 2609 1.008329 GTTTGGTCGTTGACGGAACA 58.992 50.000 3.48 0.00 40.29 3.18
2254 2648 5.992217 GTGCTATAATGTTCTTCTGGTAGGG 59.008 44.000 0.00 0.00 0.00 3.53
2578 2972 1.882912 TGGTGCAGTTACTGAAGCAG 58.117 50.000 20.05 0.00 41.88 4.24
2593 2987 3.179925 GCAGCATGGTGATGAGGAA 57.820 52.632 28.34 0.00 35.45 3.36
2594 2988 1.688772 GCAGCATGGTGATGAGGAAT 58.311 50.000 28.34 0.00 35.45 3.01
2641 3043 3.037549 GAGATCCCCTGAAGTGATGTCT 58.962 50.000 0.00 0.00 0.00 3.41
2716 3118 2.689983 ACAAGAACAGTGCAGGGAAAAG 59.310 45.455 0.00 0.00 0.00 2.27
2767 3188 7.041712 TGTTTTAACACGATCTGCTATTGTTCA 60.042 33.333 0.00 0.00 33.17 3.18
2785 3206 0.978146 CATGGAAGAGAGACCCCCGT 60.978 60.000 0.00 0.00 0.00 5.28
3189 3613 4.627035 GCAACTGCAAAAGGATTATTGTCC 59.373 41.667 0.00 0.00 41.59 4.02
3360 3792 4.051167 TCCCTGGCCACCTGCATG 62.051 66.667 0.00 0.00 43.89 4.06
3400 3832 5.640147 ACAATTGGTAATGACTTCCCTTGA 58.360 37.500 10.83 0.00 0.00 3.02
3437 3869 4.941263 TCTGTTCCAGTATAATTGGTGCAC 59.059 41.667 8.80 8.80 37.02 4.57
3516 3948 1.009900 GTCAGATCGCCTCGTACGG 60.010 63.158 16.52 6.09 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.557056 CACGTCTAACCCTGTTCTCTCA 59.443 50.000 0.00 0.00 0.00 3.27
75 76 8.830580 CACGTGGAAAAGATCATCATACTAATT 58.169 33.333 7.95 0.00 0.00 1.40
76 77 7.987458 ACACGTGGAAAAGATCATCATACTAAT 59.013 33.333 21.57 0.00 0.00 1.73
77 78 7.327975 ACACGTGGAAAAGATCATCATACTAA 58.672 34.615 21.57 0.00 0.00 2.24
78 79 6.873997 ACACGTGGAAAAGATCATCATACTA 58.126 36.000 21.57 0.00 0.00 1.82
79 80 5.734720 ACACGTGGAAAAGATCATCATACT 58.265 37.500 21.57 0.00 0.00 2.12
80 81 6.757010 AGTACACGTGGAAAAGATCATCATAC 59.243 38.462 21.57 7.71 0.00 2.39
81 82 6.873997 AGTACACGTGGAAAAGATCATCATA 58.126 36.000 21.57 0.00 0.00 2.15
82 83 5.734720 AGTACACGTGGAAAAGATCATCAT 58.265 37.500 21.57 0.00 0.00 2.45
83 84 5.147330 AGTACACGTGGAAAAGATCATCA 57.853 39.130 21.57 0.00 0.00 3.07
84 85 6.237490 CGTTAGTACACGTGGAAAAGATCATC 60.237 42.308 21.57 0.00 35.34 2.92
85 86 5.575606 CGTTAGTACACGTGGAAAAGATCAT 59.424 40.000 21.57 0.00 35.34 2.45
86 87 4.919168 CGTTAGTACACGTGGAAAAGATCA 59.081 41.667 21.57 0.00 35.34 2.92
87 88 5.431650 CGTTAGTACACGTGGAAAAGATC 57.568 43.478 21.57 0.00 35.34 2.75
161 162 9.996554 TCAACTTAACTGAAAGAATCACTATGA 57.003 29.630 2.42 0.00 37.43 2.15
163 164 8.940952 GCTCAACTTAACTGAAAGAATCACTAT 58.059 33.333 2.42 0.00 37.43 2.12
164 165 8.150945 AGCTCAACTTAACTGAAAGAATCACTA 58.849 33.333 2.42 0.00 37.43 2.74
165 166 6.995091 AGCTCAACTTAACTGAAAGAATCACT 59.005 34.615 2.42 0.00 37.43 3.41
166 167 7.195839 AGCTCAACTTAACTGAAAGAATCAC 57.804 36.000 2.42 0.00 37.43 3.06
167 168 7.807977 AAGCTCAACTTAACTGAAAGAATCA 57.192 32.000 0.00 0.00 36.62 2.57
179 180 8.149973 AGACAAACGATTTAAGCTCAACTTAA 57.850 30.769 0.00 0.00 46.73 1.85
180 181 7.095355 GGAGACAAACGATTTAAGCTCAACTTA 60.095 37.037 0.00 0.00 39.97 2.24
181 182 6.293462 GGAGACAAACGATTTAAGCTCAACTT 60.293 38.462 0.00 0.00 42.76 2.66
182 183 5.179555 GGAGACAAACGATTTAAGCTCAACT 59.820 40.000 0.00 0.00 0.00 3.16
183 184 5.179555 AGGAGACAAACGATTTAAGCTCAAC 59.820 40.000 0.00 0.00 0.00 3.18
184 185 5.179368 CAGGAGACAAACGATTTAAGCTCAA 59.821 40.000 0.00 0.00 0.00 3.02
185 186 4.690748 CAGGAGACAAACGATTTAAGCTCA 59.309 41.667 0.00 0.00 0.00 4.26
186 187 4.436183 GCAGGAGACAAACGATTTAAGCTC 60.436 45.833 0.00 0.00 0.00 4.09
187 188 3.437049 GCAGGAGACAAACGATTTAAGCT 59.563 43.478 0.00 0.00 0.00 3.74
188 189 3.437049 AGCAGGAGACAAACGATTTAAGC 59.563 43.478 0.00 0.00 0.00 3.09
189 190 4.932200 AGAGCAGGAGACAAACGATTTAAG 59.068 41.667 0.00 0.00 0.00 1.85
190 191 4.894784 AGAGCAGGAGACAAACGATTTAA 58.105 39.130 0.00 0.00 0.00 1.52
191 192 4.021456 TGAGAGCAGGAGACAAACGATTTA 60.021 41.667 0.00 0.00 0.00 1.40
192 193 3.244215 TGAGAGCAGGAGACAAACGATTT 60.244 43.478 0.00 0.00 0.00 2.17
193 194 2.300152 TGAGAGCAGGAGACAAACGATT 59.700 45.455 0.00 0.00 0.00 3.34
194 195 1.895798 TGAGAGCAGGAGACAAACGAT 59.104 47.619 0.00 0.00 0.00 3.73
195 196 1.270826 CTGAGAGCAGGAGACAAACGA 59.729 52.381 0.00 0.00 38.51 3.85
196 197 1.707632 CTGAGAGCAGGAGACAAACG 58.292 55.000 0.00 0.00 38.51 3.60
197 198 1.001860 AGCTGAGAGCAGGAGACAAAC 59.998 52.381 0.00 0.00 45.56 2.93
198 199 1.346062 AGCTGAGAGCAGGAGACAAA 58.654 50.000 0.00 0.00 45.56 2.83
199 200 2.222227 TAGCTGAGAGCAGGAGACAA 57.778 50.000 0.00 0.00 45.56 3.18
200 201 2.222227 TTAGCTGAGAGCAGGAGACA 57.778 50.000 0.00 0.00 45.56 3.41
201 202 3.817709 AATTAGCTGAGAGCAGGAGAC 57.182 47.619 0.00 0.00 45.56 3.36
202 203 4.343526 CCTAAATTAGCTGAGAGCAGGAGA 59.656 45.833 0.00 0.00 45.56 3.71
203 204 4.343526 TCCTAAATTAGCTGAGAGCAGGAG 59.656 45.833 0.00 0.00 45.56 3.69
204 205 4.290093 TCCTAAATTAGCTGAGAGCAGGA 58.710 43.478 0.00 0.00 45.56 3.86
205 206 4.679373 TCCTAAATTAGCTGAGAGCAGG 57.321 45.455 0.00 0.00 45.56 4.85
206 207 6.073873 CGAAATCCTAAATTAGCTGAGAGCAG 60.074 42.308 0.00 0.00 45.56 4.24
207 208 5.755375 CGAAATCCTAAATTAGCTGAGAGCA 59.245 40.000 0.00 0.00 45.56 4.26
208 209 5.755861 ACGAAATCCTAAATTAGCTGAGAGC 59.244 40.000 0.00 0.00 42.84 4.09
209 210 9.482627 AATACGAAATCCTAAATTAGCTGAGAG 57.517 33.333 0.00 0.00 0.00 3.20
224 225 9.909644 TGCTTCTCTAGTTATAATACGAAATCC 57.090 33.333 0.00 0.00 0.00 3.01
261 262 8.867935 GCAAATGCATGTACAAAATAATACACA 58.132 29.630 0.00 0.00 41.59 3.72
287 288 5.124297 TCTGACCTGAAAATATGCATGTGTG 59.876 40.000 10.16 0.00 0.00 3.82
288 289 5.255687 TCTGACCTGAAAATATGCATGTGT 58.744 37.500 10.16 0.00 0.00 3.72
289 290 5.823209 TCTGACCTGAAAATATGCATGTG 57.177 39.130 10.16 0.00 0.00 3.21
290 291 7.262772 CAAATCTGACCTGAAAATATGCATGT 58.737 34.615 10.16 0.00 0.00 3.21
291 292 6.200286 GCAAATCTGACCTGAAAATATGCATG 59.800 38.462 10.16 0.00 0.00 4.06
292 293 6.278363 GCAAATCTGACCTGAAAATATGCAT 58.722 36.000 3.79 3.79 0.00 3.96
293 294 5.394443 GGCAAATCTGACCTGAAAATATGCA 60.394 40.000 0.00 0.00 0.00 3.96
294 295 5.045872 GGCAAATCTGACCTGAAAATATGC 58.954 41.667 0.00 0.00 0.00 3.14
295 296 6.211587 TGGCAAATCTGACCTGAAAATATG 57.788 37.500 0.00 0.00 0.00 1.78
296 297 6.381994 ACATGGCAAATCTGACCTGAAAATAT 59.618 34.615 0.00 0.00 0.00 1.28
297 298 5.716228 ACATGGCAAATCTGACCTGAAAATA 59.284 36.000 0.00 0.00 0.00 1.40
298 299 4.529377 ACATGGCAAATCTGACCTGAAAAT 59.471 37.500 0.00 0.00 0.00 1.82
299 300 3.896888 ACATGGCAAATCTGACCTGAAAA 59.103 39.130 0.00 0.00 0.00 2.29
300 301 3.256383 CACATGGCAAATCTGACCTGAAA 59.744 43.478 0.00 0.00 0.00 2.69
301 302 2.821378 CACATGGCAAATCTGACCTGAA 59.179 45.455 0.00 0.00 0.00 3.02
302 303 2.439409 CACATGGCAAATCTGACCTGA 58.561 47.619 0.00 0.00 0.00 3.86
303 304 1.135199 GCACATGGCAAATCTGACCTG 60.135 52.381 0.00 0.00 43.97 4.00
304 305 1.180029 GCACATGGCAAATCTGACCT 58.820 50.000 0.00 0.00 43.97 3.85
305 306 3.727419 GCACATGGCAAATCTGACC 57.273 52.632 0.00 0.00 43.97 4.02
315 316 1.080298 GGCAAACAGAGCACATGGC 60.080 57.895 0.00 0.00 45.30 4.40
316 317 0.038892 GTGGCAAACAGAGCACATGG 60.039 55.000 0.00 0.00 0.00 3.66
317 318 0.038892 GGTGGCAAACAGAGCACATG 60.039 55.000 0.00 0.00 0.00 3.21
318 319 0.467844 TGGTGGCAAACAGAGCACAT 60.468 50.000 0.00 0.00 0.00 3.21
319 320 0.682532 TTGGTGGCAAACAGAGCACA 60.683 50.000 0.00 0.00 0.00 4.57
320 321 0.459489 TTTGGTGGCAAACAGAGCAC 59.541 50.000 0.00 0.00 0.00 4.40
321 322 0.746063 CTTTGGTGGCAAACAGAGCA 59.254 50.000 0.00 0.00 0.00 4.26
322 323 0.746659 ACTTTGGTGGCAAACAGAGC 59.253 50.000 0.00 0.00 0.00 4.09
323 324 2.023673 TCACTTTGGTGGCAAACAGAG 58.976 47.619 0.00 0.00 43.17 3.35
324 325 2.136298 TCACTTTGGTGGCAAACAGA 57.864 45.000 0.00 0.00 43.17 3.41
325 326 2.166254 ACTTCACTTTGGTGGCAAACAG 59.834 45.455 0.00 0.00 43.17 3.16
326 327 2.094286 CACTTCACTTTGGTGGCAAACA 60.094 45.455 0.00 0.00 43.17 2.83
327 328 2.539476 CACTTCACTTTGGTGGCAAAC 58.461 47.619 0.00 0.00 43.17 2.93
328 329 1.134848 GCACTTCACTTTGGTGGCAAA 60.135 47.619 0.00 0.00 43.17 3.68
329 330 0.459489 GCACTTCACTTTGGTGGCAA 59.541 50.000 0.00 0.00 43.17 4.52
330 331 2.114638 GCACTTCACTTTGGTGGCA 58.885 52.632 0.00 0.00 43.17 4.92
331 332 1.363807 GGCACTTCACTTTGGTGGC 59.636 57.895 0.00 0.00 46.00 5.01
332 333 1.463553 GGGGCACTTCACTTTGGTGG 61.464 60.000 0.00 0.00 43.17 4.61
333 334 0.468029 AGGGGCACTTCACTTTGGTG 60.468 55.000 0.00 0.00 44.23 4.17
334 335 0.261696 AAGGGGCACTTCACTTTGGT 59.738 50.000 0.00 0.00 32.85 3.67
335 336 3.131850 AAGGGGCACTTCACTTTGG 57.868 52.632 0.00 0.00 32.85 3.28
343 344 4.767409 GTCTGAAAATAAGAAGGGGCACTT 59.233 41.667 0.00 0.00 43.65 3.16
344 345 4.043435 AGTCTGAAAATAAGAAGGGGCACT 59.957 41.667 0.00 0.00 0.00 4.40
345 346 4.336280 AGTCTGAAAATAAGAAGGGGCAC 58.664 43.478 0.00 0.00 0.00 5.01
346 347 4.657814 AGTCTGAAAATAAGAAGGGGCA 57.342 40.909 0.00 0.00 0.00 5.36
347 348 6.357367 TCATAGTCTGAAAATAAGAAGGGGC 58.643 40.000 0.00 0.00 0.00 5.80
348 349 8.986929 AATCATAGTCTGAAAATAAGAAGGGG 57.013 34.615 0.00 0.00 37.44 4.79
374 375 9.796120 CAAACAGGACTATTAAACAAAACTTCA 57.204 29.630 0.00 0.00 0.00 3.02
375 376 9.797556 ACAAACAGGACTATTAAACAAAACTTC 57.202 29.630 0.00 0.00 0.00 3.01
385 386 9.967451 TCCATGAAATACAAACAGGACTATTAA 57.033 29.630 0.00 0.00 0.00 1.40
386 387 9.391006 GTCCATGAAATACAAACAGGACTATTA 57.609 33.333 0.00 0.00 37.33 0.98
387 388 8.109634 AGTCCATGAAATACAAACAGGACTATT 58.890 33.333 8.88 0.00 42.65 1.73
388 389 7.554118 CAGTCCATGAAATACAAACAGGACTAT 59.446 37.037 10.12 0.00 42.62 2.12
389 390 6.878923 CAGTCCATGAAATACAAACAGGACTA 59.121 38.462 10.12 0.00 42.62 2.59
390 391 5.707298 CAGTCCATGAAATACAAACAGGACT 59.293 40.000 0.00 0.00 43.87 3.85
391 392 5.473504 ACAGTCCATGAAATACAAACAGGAC 59.526 40.000 0.00 0.00 38.87 3.85
392 393 5.630121 ACAGTCCATGAAATACAAACAGGA 58.370 37.500 0.00 0.00 0.00 3.86
393 394 5.964958 ACAGTCCATGAAATACAAACAGG 57.035 39.130 0.00 0.00 0.00 4.00
394 395 8.498054 AGATACAGTCCATGAAATACAAACAG 57.502 34.615 0.00 0.00 0.00 3.16
404 405 9.547279 ACATGGTATATAGATACAGTCCATGAA 57.453 33.333 22.16 0.00 39.91 2.57
405 406 9.547279 AACATGGTATATAGATACAGTCCATGA 57.453 33.333 22.16 0.00 39.91 3.07
421 422 9.116067 GGTTACATCTGCTTTTAACATGGTATA 57.884 33.333 0.00 0.00 0.00 1.47
422 423 7.834181 AGGTTACATCTGCTTTTAACATGGTAT 59.166 33.333 0.00 0.00 0.00 2.73
423 424 7.172342 AGGTTACATCTGCTTTTAACATGGTA 58.828 34.615 0.00 0.00 0.00 3.25
424 425 6.010219 AGGTTACATCTGCTTTTAACATGGT 58.990 36.000 0.00 0.00 0.00 3.55
425 426 6.150976 TGAGGTTACATCTGCTTTTAACATGG 59.849 38.462 0.00 0.00 0.00 3.66
426 427 7.144722 TGAGGTTACATCTGCTTTTAACATG 57.855 36.000 0.00 0.00 0.00 3.21
427 428 7.944729 ATGAGGTTACATCTGCTTTTAACAT 57.055 32.000 0.00 0.00 0.00 2.71
428 429 7.759489 AATGAGGTTACATCTGCTTTTAACA 57.241 32.000 0.00 0.00 0.00 2.41
433 434 9.860898 GAAAATAAATGAGGTTACATCTGCTTT 57.139 29.630 0.00 0.00 0.00 3.51
434 435 9.023962 TGAAAATAAATGAGGTTACATCTGCTT 57.976 29.630 0.00 0.00 0.00 3.91
435 436 8.462016 GTGAAAATAAATGAGGTTACATCTGCT 58.538 33.333 0.00 0.00 0.00 4.24
436 437 8.243426 TGTGAAAATAAATGAGGTTACATCTGC 58.757 33.333 0.00 0.00 0.00 4.26
469 470 9.120538 GGTTTGATATAGTGAAGAGGCATTTAA 57.879 33.333 0.00 0.00 0.00 1.52
470 471 7.441157 CGGTTTGATATAGTGAAGAGGCATTTA 59.559 37.037 0.00 0.00 0.00 1.40
471 472 6.260936 CGGTTTGATATAGTGAAGAGGCATTT 59.739 38.462 0.00 0.00 0.00 2.32
472 473 5.760253 CGGTTTGATATAGTGAAGAGGCATT 59.240 40.000 0.00 0.00 0.00 3.56
473 474 5.070446 TCGGTTTGATATAGTGAAGAGGCAT 59.930 40.000 0.00 0.00 0.00 4.40
474 475 4.404394 TCGGTTTGATATAGTGAAGAGGCA 59.596 41.667 0.00 0.00 0.00 4.75
475 476 4.945246 TCGGTTTGATATAGTGAAGAGGC 58.055 43.478 0.00 0.00 0.00 4.70
476 477 6.987386 AGATCGGTTTGATATAGTGAAGAGG 58.013 40.000 0.00 0.00 37.47 3.69
477 478 8.879342 AAAGATCGGTTTGATATAGTGAAGAG 57.121 34.615 0.00 0.00 37.47 2.85
478 479 8.696374 AGAAAGATCGGTTTGATATAGTGAAGA 58.304 33.333 0.00 0.00 37.47 2.87
479 480 8.879342 AGAAAGATCGGTTTGATATAGTGAAG 57.121 34.615 0.00 0.00 37.47 3.02
480 481 8.696374 AGAGAAAGATCGGTTTGATATAGTGAA 58.304 33.333 0.00 0.00 37.47 3.18
481 482 8.239038 AGAGAAAGATCGGTTTGATATAGTGA 57.761 34.615 0.00 0.00 37.47 3.41
486 487 7.816995 GCTCATAGAGAAAGATCGGTTTGATAT 59.183 37.037 0.00 0.00 37.47 1.63
487 488 7.148641 GCTCATAGAGAAAGATCGGTTTGATA 58.851 38.462 0.00 0.00 37.47 2.15
488 489 5.988561 GCTCATAGAGAAAGATCGGTTTGAT 59.011 40.000 0.00 0.00 41.06 2.57
489 490 5.352284 GCTCATAGAGAAAGATCGGTTTGA 58.648 41.667 0.00 0.00 0.00 2.69
490 491 4.509600 GGCTCATAGAGAAAGATCGGTTTG 59.490 45.833 0.00 0.00 0.00 2.93
491 492 4.407296 AGGCTCATAGAGAAAGATCGGTTT 59.593 41.667 0.00 0.00 0.00 3.27
492 493 3.964031 AGGCTCATAGAGAAAGATCGGTT 59.036 43.478 0.00 0.00 0.00 4.44
493 494 3.320541 CAGGCTCATAGAGAAAGATCGGT 59.679 47.826 0.00 0.00 0.00 4.69
494 495 3.860378 GCAGGCTCATAGAGAAAGATCGG 60.860 52.174 0.00 0.00 0.00 4.18
495 496 3.243670 TGCAGGCTCATAGAGAAAGATCG 60.244 47.826 0.00 0.00 0.00 3.69
496 497 4.202243 ACTGCAGGCTCATAGAGAAAGATC 60.202 45.833 19.93 0.00 0.00 2.75
497 498 3.710677 ACTGCAGGCTCATAGAGAAAGAT 59.289 43.478 19.93 0.00 0.00 2.40
498 499 3.102972 ACTGCAGGCTCATAGAGAAAGA 58.897 45.455 19.93 0.00 0.00 2.52
499 500 3.540314 ACTGCAGGCTCATAGAGAAAG 57.460 47.619 19.93 0.00 0.00 2.62
500 501 3.988976 AACTGCAGGCTCATAGAGAAA 57.011 42.857 19.93 0.00 0.00 2.52
501 502 3.008375 ACAAACTGCAGGCTCATAGAGAA 59.992 43.478 19.93 0.00 0.00 2.87
502 503 2.568956 ACAAACTGCAGGCTCATAGAGA 59.431 45.455 19.93 0.00 0.00 3.10
503 504 2.676839 CACAAACTGCAGGCTCATAGAG 59.323 50.000 19.93 0.00 0.00 2.43
504 505 2.302733 TCACAAACTGCAGGCTCATAGA 59.697 45.455 19.93 4.13 0.00 1.98
505 506 2.703416 TCACAAACTGCAGGCTCATAG 58.297 47.619 19.93 2.98 0.00 2.23
506 507 2.857186 TCACAAACTGCAGGCTCATA 57.143 45.000 19.93 0.00 0.00 2.15
507 508 1.816835 CATCACAAACTGCAGGCTCAT 59.183 47.619 19.93 0.00 0.00 2.90
508 509 1.241165 CATCACAAACTGCAGGCTCA 58.759 50.000 19.93 0.00 0.00 4.26
509 510 1.242076 ACATCACAAACTGCAGGCTC 58.758 50.000 19.93 0.00 0.00 4.70
510 511 1.338973 CAACATCACAAACTGCAGGCT 59.661 47.619 19.93 0.99 0.00 4.58
511 512 1.067516 ACAACATCACAAACTGCAGGC 59.932 47.619 19.93 0.00 0.00 4.85
512 513 4.566545 TTACAACATCACAAACTGCAGG 57.433 40.909 19.93 2.38 0.00 4.85
513 514 7.306749 GGAAAATTACAACATCACAAACTGCAG 60.307 37.037 13.48 13.48 0.00 4.41
514 515 6.478344 GGAAAATTACAACATCACAAACTGCA 59.522 34.615 0.00 0.00 0.00 4.41
515 516 6.701400 AGGAAAATTACAACATCACAAACTGC 59.299 34.615 0.00 0.00 0.00 4.40
516 517 8.647143 AAGGAAAATTACAACATCACAAACTG 57.353 30.769 0.00 0.00 0.00 3.16
519 520 9.757227 CCTAAAGGAAAATTACAACATCACAAA 57.243 29.630 0.00 0.00 37.39 2.83
520 521 7.870445 GCCTAAAGGAAAATTACAACATCACAA 59.130 33.333 0.00 0.00 37.39 3.33
521 522 7.014711 TGCCTAAAGGAAAATTACAACATCACA 59.985 33.333 0.00 0.00 37.39 3.58
522 523 7.375053 TGCCTAAAGGAAAATTACAACATCAC 58.625 34.615 0.00 0.00 37.39 3.06
523 524 7.531857 TGCCTAAAGGAAAATTACAACATCA 57.468 32.000 0.00 0.00 37.39 3.07
524 525 8.825667 TTTGCCTAAAGGAAAATTACAACATC 57.174 30.769 0.00 0.00 37.80 3.06
534 535 8.919145 TCTTCAGTTTATTTGCCTAAAGGAAAA 58.081 29.630 4.60 4.60 46.25 2.29
535 536 8.472007 TCTTCAGTTTATTTGCCTAAAGGAAA 57.528 30.769 0.00 0.00 37.39 3.13
536 537 8.472007 TTCTTCAGTTTATTTGCCTAAAGGAA 57.528 30.769 0.00 0.00 37.39 3.36
537 538 8.472007 TTTCTTCAGTTTATTTGCCTAAAGGA 57.528 30.769 0.00 0.00 37.39 3.36
538 539 9.541143 TTTTTCTTCAGTTTATTTGCCTAAAGG 57.459 29.630 0.00 0.00 38.53 3.11
561 562 8.425429 GCAAGGTGCTCAACATAGAATGTTTTT 61.425 37.037 2.59 0.00 44.72 1.94
562 563 7.011723 GCAAGGTGCTCAACATAGAATGTTTT 61.012 38.462 2.59 0.00 44.72 2.43
563 564 5.565439 GCAAGGTGCTCAACATAGAATGTTT 60.565 40.000 2.59 0.00 44.72 2.83
564 565 4.082571 GCAAGGTGCTCAACATAGAATGTT 60.083 41.667 0.00 0.00 46.40 2.71
565 566 3.441572 GCAAGGTGCTCAACATAGAATGT 59.558 43.478 0.00 0.00 42.44 2.71
566 567 3.441222 TGCAAGGTGCTCAACATAGAATG 59.559 43.478 1.43 0.00 45.31 2.67
567 568 3.689347 TGCAAGGTGCTCAACATAGAAT 58.311 40.909 1.43 0.00 45.31 2.40
568 569 3.138884 TGCAAGGTGCTCAACATAGAA 57.861 42.857 1.43 0.00 45.31 2.10
569 570 2.857186 TGCAAGGTGCTCAACATAGA 57.143 45.000 1.43 0.00 45.31 1.98
570 571 3.366679 CCTTTGCAAGGTGCTCAACATAG 60.367 47.826 7.87 0.00 45.31 2.23
571 572 2.557924 CCTTTGCAAGGTGCTCAACATA 59.442 45.455 7.87 0.00 45.31 2.29
572 573 1.342174 CCTTTGCAAGGTGCTCAACAT 59.658 47.619 7.87 0.00 45.31 2.71
573 574 0.746063 CCTTTGCAAGGTGCTCAACA 59.254 50.000 7.87 0.00 45.31 3.33
574 575 3.575399 CCTTTGCAAGGTGCTCAAC 57.425 52.632 7.87 0.00 45.31 3.18
592 593 8.290325 GTGTAAGAAGGGCATTACTAAATATGC 58.710 37.037 0.00 0.00 44.93 3.14
593 594 9.337396 TGTGTAAGAAGGGCATTACTAAATATG 57.663 33.333 0.00 0.00 33.86 1.78
594 595 9.561069 CTGTGTAAGAAGGGCATTACTAAATAT 57.439 33.333 0.00 0.00 33.86 1.28
595 596 8.764558 TCTGTGTAAGAAGGGCATTACTAAATA 58.235 33.333 0.00 0.00 33.86 1.40
596 597 7.630082 TCTGTGTAAGAAGGGCATTACTAAAT 58.370 34.615 0.00 0.00 33.86 1.40
597 598 7.011499 TCTGTGTAAGAAGGGCATTACTAAA 57.989 36.000 0.00 0.00 33.86 1.85
598 599 6.614694 TCTGTGTAAGAAGGGCATTACTAA 57.385 37.500 0.00 0.00 33.86 2.24
599 600 6.382859 TGATCTGTGTAAGAAGGGCATTACTA 59.617 38.462 0.00 0.00 38.79 1.82
600 601 5.189736 TGATCTGTGTAAGAAGGGCATTACT 59.810 40.000 0.00 0.00 38.79 2.24
601 602 5.428253 TGATCTGTGTAAGAAGGGCATTAC 58.572 41.667 0.00 0.00 38.79 1.89
602 603 5.425217 TCTGATCTGTGTAAGAAGGGCATTA 59.575 40.000 0.00 0.00 38.79 1.90
603 604 4.225942 TCTGATCTGTGTAAGAAGGGCATT 59.774 41.667 0.00 0.00 38.79 3.56
604 605 3.776969 TCTGATCTGTGTAAGAAGGGCAT 59.223 43.478 0.00 0.00 38.79 4.40
605 606 3.055819 GTCTGATCTGTGTAAGAAGGGCA 60.056 47.826 0.00 0.00 38.79 5.36
606 607 3.196685 AGTCTGATCTGTGTAAGAAGGGC 59.803 47.826 0.00 0.00 38.79 5.19
607 608 4.382470 CCAGTCTGATCTGTGTAAGAAGGG 60.382 50.000 0.00 0.00 38.79 3.95
608 609 4.753233 CCAGTCTGATCTGTGTAAGAAGG 58.247 47.826 0.00 0.00 38.79 3.46
609 610 4.180057 GCCAGTCTGATCTGTGTAAGAAG 58.820 47.826 0.00 0.00 38.79 2.85
610 611 3.367395 CGCCAGTCTGATCTGTGTAAGAA 60.367 47.826 0.00 0.00 38.79 2.52
611 612 2.164422 CGCCAGTCTGATCTGTGTAAGA 59.836 50.000 0.00 0.00 39.94 2.10
612 613 2.164422 TCGCCAGTCTGATCTGTGTAAG 59.836 50.000 0.00 0.00 34.02 2.34
613 614 2.167662 TCGCCAGTCTGATCTGTGTAA 58.832 47.619 0.00 0.00 34.02 2.41
614 615 1.834188 TCGCCAGTCTGATCTGTGTA 58.166 50.000 0.00 0.00 34.02 2.90
615 616 1.189752 ATCGCCAGTCTGATCTGTGT 58.810 50.000 0.00 0.00 34.02 3.72
616 617 1.931841 CAATCGCCAGTCTGATCTGTG 59.068 52.381 0.00 0.00 34.02 3.66
617 618 1.827344 TCAATCGCCAGTCTGATCTGT 59.173 47.619 0.00 0.00 34.02 3.41
618 619 2.591571 TCAATCGCCAGTCTGATCTG 57.408 50.000 0.00 0.00 35.45 2.90
619 620 2.741228 GCTTCAATCGCCAGTCTGATCT 60.741 50.000 0.00 0.00 0.00 2.75
620 621 1.596727 GCTTCAATCGCCAGTCTGATC 59.403 52.381 0.00 0.00 0.00 2.92
621 622 1.209019 AGCTTCAATCGCCAGTCTGAT 59.791 47.619 0.00 0.00 0.00 2.90
622 623 0.610174 AGCTTCAATCGCCAGTCTGA 59.390 50.000 0.00 0.00 0.00 3.27
623 624 1.129998 CAAGCTTCAATCGCCAGTCTG 59.870 52.381 0.00 0.00 0.00 3.51
624 625 1.446907 CAAGCTTCAATCGCCAGTCT 58.553 50.000 0.00 0.00 0.00 3.24
625 626 0.179179 GCAAGCTTCAATCGCCAGTC 60.179 55.000 0.00 0.00 0.00 3.51
626 627 1.589716 GGCAAGCTTCAATCGCCAGT 61.590 55.000 17.44 0.00 42.50 4.00
627 628 1.138247 GGCAAGCTTCAATCGCCAG 59.862 57.895 17.44 0.00 42.50 4.85
628 629 1.303561 AGGCAAGCTTCAATCGCCA 60.304 52.632 22.58 0.00 45.47 5.69
629 630 1.028868 AGAGGCAAGCTTCAATCGCC 61.029 55.000 15.19 15.19 43.31 5.54
630 631 0.376502 GAGAGGCAAGCTTCAATCGC 59.623 55.000 6.94 0.00 0.00 4.58
631 632 1.664659 CAGAGAGGCAAGCTTCAATCG 59.335 52.381 6.94 0.00 0.00 3.34
632 633 2.677337 GACAGAGAGGCAAGCTTCAATC 59.323 50.000 6.94 0.00 0.00 2.67
633 634 2.039480 TGACAGAGAGGCAAGCTTCAAT 59.961 45.455 6.94 0.00 26.55 2.57
634 635 1.417517 TGACAGAGAGGCAAGCTTCAA 59.582 47.619 6.94 0.00 26.55 2.69
635 636 1.051008 TGACAGAGAGGCAAGCTTCA 58.949 50.000 6.94 0.00 26.55 3.02
636 637 2.008329 CATGACAGAGAGGCAAGCTTC 58.992 52.381 0.00 0.00 39.98 3.86
637 638 1.350351 ACATGACAGAGAGGCAAGCTT 59.650 47.619 0.00 0.00 39.98 3.74
638 639 0.982704 ACATGACAGAGAGGCAAGCT 59.017 50.000 0.00 0.00 39.98 3.74
639 640 1.085091 CACATGACAGAGAGGCAAGC 58.915 55.000 0.00 0.00 39.98 4.01
640 641 1.085091 GCACATGACAGAGAGGCAAG 58.915 55.000 0.00 0.00 39.98 4.01
641 642 0.689055 AGCACATGACAGAGAGGCAA 59.311 50.000 0.00 0.00 39.98 4.52
642 643 0.689055 AAGCACATGACAGAGAGGCA 59.311 50.000 0.00 0.00 41.62 4.75
643 644 2.680312 TAAGCACATGACAGAGAGGC 57.320 50.000 0.00 0.00 0.00 4.70
644 645 5.048434 TCGATATAAGCACATGACAGAGAGG 60.048 44.000 0.00 0.00 0.00 3.69
645 646 6.006759 TCGATATAAGCACATGACAGAGAG 57.993 41.667 0.00 0.00 0.00 3.20
646 647 5.048434 CCTCGATATAAGCACATGACAGAGA 60.048 44.000 0.00 0.00 0.00 3.10
647 648 5.159925 CCTCGATATAAGCACATGACAGAG 58.840 45.833 0.00 0.00 0.00 3.35
648 649 4.584743 ACCTCGATATAAGCACATGACAGA 59.415 41.667 0.00 0.00 0.00 3.41
649 650 4.683320 CACCTCGATATAAGCACATGACAG 59.317 45.833 0.00 0.00 0.00 3.51
650 651 4.501400 CCACCTCGATATAAGCACATGACA 60.501 45.833 0.00 0.00 0.00 3.58
651 652 3.990469 CCACCTCGATATAAGCACATGAC 59.010 47.826 0.00 0.00 0.00 3.06
652 653 3.895041 TCCACCTCGATATAAGCACATGA 59.105 43.478 0.00 0.00 0.00 3.07
653 654 3.990469 GTCCACCTCGATATAAGCACATG 59.010 47.826 0.00 0.00 0.00 3.21
654 655 3.641436 TGTCCACCTCGATATAAGCACAT 59.359 43.478 0.00 0.00 0.00 3.21
655 656 3.028130 TGTCCACCTCGATATAAGCACA 58.972 45.455 0.00 0.00 0.00 4.57
656 657 3.181479 TGTGTCCACCTCGATATAAGCAC 60.181 47.826 0.00 0.00 0.00 4.40
657 658 3.028130 TGTGTCCACCTCGATATAAGCA 58.972 45.455 0.00 0.00 0.00 3.91
658 659 3.728076 TGTGTCCACCTCGATATAAGC 57.272 47.619 0.00 0.00 0.00 3.09
659 660 5.713792 AGATGTGTCCACCTCGATATAAG 57.286 43.478 0.00 0.00 32.31 1.73
660 661 5.183331 GCTAGATGTGTCCACCTCGATATAA 59.817 44.000 0.00 0.00 32.31 0.98
661 662 4.700692 GCTAGATGTGTCCACCTCGATATA 59.299 45.833 0.00 0.00 32.31 0.86
662 663 3.508012 GCTAGATGTGTCCACCTCGATAT 59.492 47.826 0.00 0.00 32.31 1.63
663 664 2.885266 GCTAGATGTGTCCACCTCGATA 59.115 50.000 0.00 0.00 32.31 2.92
664 665 1.683917 GCTAGATGTGTCCACCTCGAT 59.316 52.381 0.00 0.00 32.31 3.59
665 666 1.103803 GCTAGATGTGTCCACCTCGA 58.896 55.000 0.00 0.00 32.31 4.04
666 667 1.107114 AGCTAGATGTGTCCACCTCG 58.893 55.000 0.00 0.00 32.31 4.63
667 668 2.362717 GGTAGCTAGATGTGTCCACCTC 59.637 54.545 0.00 0.00 0.00 3.85
668 669 2.292257 TGGTAGCTAGATGTGTCCACCT 60.292 50.000 0.00 0.00 0.00 4.00
669 670 2.108168 TGGTAGCTAGATGTGTCCACC 58.892 52.381 0.00 0.00 0.00 4.61
670 671 3.447586 TCTTGGTAGCTAGATGTGTCCAC 59.552 47.826 1.80 0.00 0.00 4.02
671 672 3.708451 TCTTGGTAGCTAGATGTGTCCA 58.292 45.455 1.80 0.00 0.00 4.02
672 673 4.442192 CCTTCTTGGTAGCTAGATGTGTCC 60.442 50.000 6.90 0.00 0.00 4.02
673 674 4.442192 CCCTTCTTGGTAGCTAGATGTGTC 60.442 50.000 6.90 0.00 0.00 3.67
674 675 3.452627 CCCTTCTTGGTAGCTAGATGTGT 59.547 47.826 6.90 0.00 0.00 3.72
675 676 3.742640 GCCCTTCTTGGTAGCTAGATGTG 60.743 52.174 6.90 2.75 0.00 3.21
676 677 2.436173 GCCCTTCTTGGTAGCTAGATGT 59.564 50.000 6.90 0.00 0.00 3.06
677 678 2.546795 CGCCCTTCTTGGTAGCTAGATG 60.547 54.545 6.90 9.13 0.00 2.90
678 679 1.689273 CGCCCTTCTTGGTAGCTAGAT 59.311 52.381 6.90 0.00 0.00 1.98
679 680 1.112113 CGCCCTTCTTGGTAGCTAGA 58.888 55.000 1.80 1.80 0.00 2.43
680 681 0.824759 ACGCCCTTCTTGGTAGCTAG 59.175 55.000 0.00 0.00 0.00 3.42
681 682 1.272807 AACGCCCTTCTTGGTAGCTA 58.727 50.000 0.00 0.00 0.00 3.32
682 683 0.400594 AAACGCCCTTCTTGGTAGCT 59.599 50.000 0.00 0.00 0.00 3.32
683 684 0.521735 CAAACGCCCTTCTTGGTAGC 59.478 55.000 0.00 0.00 0.00 3.58
684 685 0.521735 GCAAACGCCCTTCTTGGTAG 59.478 55.000 0.00 0.00 0.00 3.18
685 686 0.891904 GGCAAACGCCCTTCTTGGTA 60.892 55.000 0.00 0.00 44.46 3.25
686 687 2.200337 GGCAAACGCCCTTCTTGGT 61.200 57.895 0.00 0.00 44.46 3.67
687 688 2.650778 GGCAAACGCCCTTCTTGG 59.349 61.111 0.00 0.00 44.46 3.61
696 697 3.942539 AACTGAAATTTTGGCAAACGC 57.057 38.095 13.10 3.10 0.00 4.84
697 698 6.820470 TCTAAACTGAAATTTTGGCAAACG 57.180 33.333 13.10 1.15 0.00 3.60
698 699 8.364129 TGATCTAAACTGAAATTTTGGCAAAC 57.636 30.769 13.10 1.52 0.00 2.93
699 700 8.954950 TTGATCTAAACTGAAATTTTGGCAAA 57.045 26.923 8.93 8.93 0.00 3.68
700 701 9.558396 AATTGATCTAAACTGAAATTTTGGCAA 57.442 25.926 0.00 0.00 0.00 4.52
737 738 9.281075 CAATAGTTGTCACAATAACATGTCATG 57.719 33.333 11.41 11.41 0.00 3.07
738 739 9.013229 ACAATAGTTGTCACAATAACATGTCAT 57.987 29.630 0.00 0.00 40.56 3.06
739 740 8.288913 CACAATAGTTGTCACAATAACATGTCA 58.711 33.333 0.00 0.00 43.23 3.58
740 741 8.503196 TCACAATAGTTGTCACAATAACATGTC 58.497 33.333 0.00 0.00 43.23 3.06
741 742 8.289618 GTCACAATAGTTGTCACAATAACATGT 58.710 33.333 0.00 0.00 43.23 3.21
742 743 8.506437 AGTCACAATAGTTGTCACAATAACATG 58.494 33.333 0.00 0.00 43.23 3.21
743 744 8.506437 CAGTCACAATAGTTGTCACAATAACAT 58.494 33.333 0.00 0.00 43.23 2.71
744 745 7.713073 TCAGTCACAATAGTTGTCACAATAACA 59.287 33.333 0.00 0.00 43.23 2.41
745 746 8.083462 TCAGTCACAATAGTTGTCACAATAAC 57.917 34.615 0.00 0.00 43.23 1.89
746 747 8.669946 TTCAGTCACAATAGTTGTCACAATAA 57.330 30.769 0.00 0.00 43.23 1.40
747 748 8.669946 TTTCAGTCACAATAGTTGTCACAATA 57.330 30.769 0.00 0.00 43.23 1.90
748 749 7.566760 TTTCAGTCACAATAGTTGTCACAAT 57.433 32.000 0.00 0.00 43.23 2.71
749 750 6.993786 TTTCAGTCACAATAGTTGTCACAA 57.006 33.333 0.00 0.00 43.23 3.33
750 751 6.993786 TTTTCAGTCACAATAGTTGTCACA 57.006 33.333 0.00 0.00 43.23 3.58
751 752 8.128582 TGATTTTTCAGTCACAATAGTTGTCAC 58.871 33.333 0.00 0.00 43.23 3.67
752 753 8.219546 TGATTTTTCAGTCACAATAGTTGTCA 57.780 30.769 0.00 0.00 43.23 3.58
753 754 9.683069 ATTGATTTTTCAGTCACAATAGTTGTC 57.317 29.630 0.00 0.00 43.23 3.18
761 762 9.597170 TCAATTGAATTGATTTTTCAGTCACAA 57.403 25.926 16.04 0.00 43.84 3.33
780 781 9.753674 AGGAATTTCTTAATGTACCTCAATTGA 57.246 29.630 8.12 8.12 0.00 2.57
800 801 9.834628 CGTGTAACACATGTAATTTTAGGAATT 57.165 29.630 0.00 0.00 35.74 2.17
801 802 9.005777 ACGTGTAACACATGTAATTTTAGGAAT 57.994 29.630 0.00 0.00 45.70 3.01
802 803 8.283992 CACGTGTAACACATGTAATTTTAGGAA 58.716 33.333 7.58 0.00 45.79 3.36
803 804 7.571613 GCACGTGTAACACATGTAATTTTAGGA 60.572 37.037 18.38 0.00 45.79 2.94
804 805 6.521821 GCACGTGTAACACATGTAATTTTAGG 59.478 38.462 18.38 0.00 45.79 2.69
805 806 7.059033 GTGCACGTGTAACACATGTAATTTTAG 59.941 37.037 18.38 0.00 45.79 1.85
806 807 6.851837 GTGCACGTGTAACACATGTAATTTTA 59.148 34.615 18.38 0.00 45.79 1.52
807 808 5.683743 GTGCACGTGTAACACATGTAATTTT 59.316 36.000 18.38 0.00 45.79 1.82
808 809 5.209240 GTGCACGTGTAACACATGTAATTT 58.791 37.500 18.38 0.00 45.79 1.82
809 810 4.609559 CGTGCACGTGTAACACATGTAATT 60.610 41.667 30.50 0.00 45.79 1.40
810 811 3.120820 CGTGCACGTGTAACACATGTAAT 60.121 43.478 30.50 0.00 45.79 1.89
811 812 2.218987 CGTGCACGTGTAACACATGTAA 59.781 45.455 30.50 0.00 45.79 2.41
812 813 1.787731 CGTGCACGTGTAACACATGTA 59.212 47.619 30.50 0.00 45.79 2.29
814 815 0.721155 GCGTGCACGTGTAACACATG 60.721 55.000 36.80 12.15 40.80 3.21
815 816 0.878523 AGCGTGCACGTGTAACACAT 60.879 50.000 36.80 11.69 42.22 3.21
816 817 1.084935 AAGCGTGCACGTGTAACACA 61.085 50.000 36.80 2.76 42.22 3.72
817 818 0.854062 TAAGCGTGCACGTGTAACAC 59.146 50.000 36.80 20.21 42.22 3.32
818 819 1.785768 ATAAGCGTGCACGTGTAACA 58.214 45.000 36.80 18.41 42.22 2.41
819 820 2.867456 AATAAGCGTGCACGTGTAAC 57.133 45.000 36.80 21.63 42.22 2.50
820 821 3.365520 CACTAATAAGCGTGCACGTGTAA 59.634 43.478 36.80 21.69 42.22 2.41
821 822 2.918600 CACTAATAAGCGTGCACGTGTA 59.081 45.455 36.80 28.14 42.22 2.90
822 823 1.724623 CACTAATAAGCGTGCACGTGT 59.275 47.619 36.80 27.04 42.22 4.49
823 824 1.060553 CCACTAATAAGCGTGCACGTG 59.939 52.381 36.80 24.47 42.22 4.49
824 825 1.067425 TCCACTAATAAGCGTGCACGT 60.067 47.619 36.80 22.79 42.22 4.49
825 826 1.588404 CTCCACTAATAAGCGTGCACG 59.412 52.381 34.01 34.01 43.27 5.34
826 827 2.888594 TCTCCACTAATAAGCGTGCAC 58.111 47.619 6.82 6.82 0.00 4.57
827 828 3.194755 TCTTCTCCACTAATAAGCGTGCA 59.805 43.478 0.00 0.00 0.00 4.57
828 829 3.782046 TCTTCTCCACTAATAAGCGTGC 58.218 45.455 0.00 0.00 0.00 5.34
829 830 5.651530 TCTTCTTCTCCACTAATAAGCGTG 58.348 41.667 0.00 0.00 0.00 5.34
830 831 5.916661 TCTTCTTCTCCACTAATAAGCGT 57.083 39.130 0.00 0.00 0.00 5.07
831 832 7.545965 TCTTTTCTTCTTCTCCACTAATAAGCG 59.454 37.037 0.00 0.00 0.00 4.68
832 833 8.779354 TCTTTTCTTCTTCTCCACTAATAAGC 57.221 34.615 0.00 0.00 0.00 3.09
838 839 9.853177 AGATTTTTCTTTTCTTCTTCTCCACTA 57.147 29.630 0.00 0.00 0.00 2.74
839 840 8.759481 AGATTTTTCTTTTCTTCTTCTCCACT 57.241 30.769 0.00 0.00 0.00 4.00
840 841 8.624776 TGAGATTTTTCTTTTCTTCTTCTCCAC 58.375 33.333 0.00 0.00 0.00 4.02
841 842 8.752005 TGAGATTTTTCTTTTCTTCTTCTCCA 57.248 30.769 0.00 0.00 0.00 3.86
868 869 1.220206 CCAATCTGGCGAGCTCACT 59.780 57.895 15.40 0.00 0.00 3.41
970 971 2.600769 ACGGAGCGAGGTTGGTCT 60.601 61.111 0.00 0.00 36.62 3.85
1685 1686 2.594592 GTGGAAGCAGGCCACGTT 60.595 61.111 5.01 0.00 45.50 3.99
1725 1726 2.541120 GCGGAGACATCAGCATGCC 61.541 63.158 15.66 0.00 44.92 4.40
1730 1731 2.125512 AACGGCGGAGACATCAGC 60.126 61.111 13.24 0.00 44.84 4.26
1731 1732 0.803768 CAGAACGGCGGAGACATCAG 60.804 60.000 13.24 0.00 27.25 2.90
1765 1766 4.446413 GTCGGGTTGACGCCGGAT 62.446 66.667 5.05 0.00 39.51 4.18
1819 1820 1.202533 CCTTCGAAGTCGCCCATGTAT 60.203 52.381 23.03 0.00 39.60 2.29
1824 1825 2.342279 CACCTTCGAAGTCGCCCA 59.658 61.111 23.03 0.00 39.60 5.36
1855 1856 3.565307 TCCAAACTCAGGCATTTTGTCT 58.435 40.909 0.00 0.00 28.47 3.41
1906 2300 1.227380 GAGCATCCCGTCGAGCATT 60.227 57.895 0.00 0.00 0.00 3.56
1980 2374 4.579384 CACACCCGGCACCCAACT 62.579 66.667 0.00 0.00 0.00 3.16
1982 2376 4.885270 CACACACCCGGCACCCAA 62.885 66.667 0.00 0.00 0.00 4.12
2128 2522 2.964464 TGCACAAAACCCATCAATCAGT 59.036 40.909 0.00 0.00 0.00 3.41
2134 2528 0.758310 TGGCTGCACAAAACCCATCA 60.758 50.000 0.50 0.00 0.00 3.07
2215 2609 2.629656 GCACTGCCCGCTTGACAAT 61.630 57.895 0.00 0.00 0.00 2.71
2254 2648 0.036732 TCATCCCAGCCACAGACAAC 59.963 55.000 0.00 0.00 0.00 3.32
2353 2747 0.178921 TCCTCTGACACAGCTCCCTT 60.179 55.000 0.00 0.00 0.00 3.95
2578 2972 3.216800 TGCTAATTCCTCATCACCATGC 58.783 45.455 0.00 0.00 0.00 4.06
2593 2987 9.445878 CTCAATCCTAATACATGTGATGCTAAT 57.554 33.333 9.11 0.00 0.00 1.73
2594 2988 7.879677 CCTCAATCCTAATACATGTGATGCTAA 59.120 37.037 9.11 0.00 0.00 3.09
2641 3043 2.158769 AGAACCACACAATGCTCACAGA 60.159 45.455 0.00 0.00 0.00 3.41
2716 3118 2.036089 GGTCCTCCGATGAATGGTAGTC 59.964 54.545 0.00 0.00 0.00 2.59
2767 3188 0.978146 CACGGGGGTCTCTCTTCCAT 60.978 60.000 0.00 0.00 0.00 3.41
2785 3206 8.165239 AGTTATTGTGATAGCTTTGACAAACA 57.835 30.769 12.55 2.48 32.34 2.83
2903 3324 8.289440 CATGGATATGCACAAAATTATCACAC 57.711 34.615 0.00 0.00 0.00 3.82
2964 3386 3.116959 ACCGGGTGTATATTTCCCTTGA 58.883 45.455 6.32 0.00 39.10 3.02
3196 3620 5.807011 GCCCATGCTAAGAAAGTAACAAATG 59.193 40.000 0.00 0.00 33.53 2.32
3343 3775 4.051167 CATGCAGGTGGCCAGGGA 62.051 66.667 5.11 0.00 43.89 4.20
3360 3792 5.393461 CCAATTGTATGCTTGGTTCTCTTCC 60.393 44.000 4.43 0.00 37.67 3.46
3388 3820 4.371624 ACATGTCATTCAAGGGAAGTCA 57.628 40.909 0.00 0.00 36.25 3.41
3391 3823 6.764308 AATGTACATGTCATTCAAGGGAAG 57.236 37.500 9.63 0.00 36.25 3.46
3437 3869 8.506437 TGAAGCTGGCAATTAGAAAATATATCG 58.494 33.333 0.00 0.00 0.00 2.92
3516 3948 7.499232 ACAGTGCATCATTTAATAGGGTACTTC 59.501 37.037 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.