Multiple sequence alignment - TraesCS4B01G237300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G237300 chr4B 100.000 2803 0 0 1 2803 495124890 495127692 0.000000e+00 5177.0
1 TraesCS4B01G237300 chr4B 93.590 78 4 1 339 415 28407039 28407116 6.340000e-22 115.0
2 TraesCS4B01G237300 chr4D 90.253 1539 88 22 716 2211 400785799 400787318 0.000000e+00 1954.0
3 TraesCS4B01G237300 chr4D 89.895 287 19 9 415 696 400785531 400785812 7.380000e-96 361.0
4 TraesCS4B01G237300 chr4A 88.939 886 47 26 716 1587 58551832 58552680 0.000000e+00 1046.0
5 TraesCS4B01G237300 chr4A 89.781 274 22 6 426 696 58551575 58551845 2.070000e-91 346.0
6 TraesCS4B01G237300 chr4A 94.064 219 10 1 1593 1811 58557979 58558194 2.080000e-86 329.0
7 TraesCS4B01G237300 chr4A 91.589 214 13 4 1877 2089 58558187 58558396 9.820000e-75 291.0
8 TraesCS4B01G237300 chr4A 91.549 71 5 1 2111 2180 58559842 58559912 2.300000e-16 97.1
9 TraesCS4B01G237300 chr1B 97.762 581 13 0 2223 2803 3268401 3267821 0.000000e+00 1002.0
10 TraesCS4B01G237300 chr1B 77.434 226 36 9 1 214 371147123 371147345 1.360000e-23 121.0
11 TraesCS4B01G237300 chr6B 97.284 589 16 0 2212 2800 80052199 80052787 0.000000e+00 1000.0
12 TraesCS4B01G237300 chr6B 91.358 81 6 1 339 419 30352848 30352927 2.950000e-20 110.0
13 TraesCS4B01G237300 chr6D 93.503 354 23 0 2212 2565 157483286 157482933 6.880000e-146 527.0
14 TraesCS4B01G237300 chr6D 88.316 291 32 1 2212 2500 101240366 101240076 5.750000e-92 348.0
15 TraesCS4B01G237300 chr6D 93.220 236 16 0 2568 2803 157482760 157482525 5.750000e-92 348.0
16 TraesCS4B01G237300 chr6D 87.248 298 36 2 2211 2508 408918457 408918162 3.460000e-89 339.0
17 TraesCS4B01G237300 chr6D 88.636 88 7 3 339 426 362870111 362870195 1.370000e-18 104.0
18 TraesCS4B01G237300 chr2A 89.014 355 34 3 2212 2565 734391019 734390669 4.290000e-118 435.0
19 TraesCS4B01G237300 chr2A 89.062 256 25 3 2549 2803 734390514 734390261 5.830000e-82 315.0
20 TraesCS4B01G237300 chr2A 80.541 185 29 6 1 182 539017479 539017299 4.870000e-28 135.0
21 TraesCS4B01G237300 chr2A 94.805 77 3 1 339 414 118678208 118678132 4.900000e-23 119.0
22 TraesCS4B01G237300 chr5A 87.606 355 44 0 2215 2569 533524142 533523788 2.010000e-111 412.0
23 TraesCS4B01G237300 chr5A 85.149 101 13 2 115 214 616913080 616913179 4.940000e-18 102.0
24 TraesCS4B01G237300 chr5A 87.356 87 11 0 235 321 9494901 9494987 1.780000e-17 100.0
25 TraesCS4B01G237300 chr2D 89.841 315 29 3 2212 2525 12874055 12874367 4.350000e-108 401.0
26 TraesCS4B01G237300 chr2D 77.619 210 43 4 2 209 615577602 615577809 1.050000e-24 124.0
27 TraesCS4B01G237300 chrUn 90.132 304 28 2 2212 2514 153357878 153358180 7.280000e-106 394.0
28 TraesCS4B01G237300 chrUn 90.361 83 5 3 339 419 177151716 177151635 3.820000e-19 106.0
29 TraesCS4B01G237300 chr1D 88.732 213 22 1 2560 2770 370340732 370340944 2.770000e-65 259.0
30 TraesCS4B01G237300 chr1D 81.132 212 30 8 1 209 232139739 232139943 8.030000e-36 161.0
31 TraesCS4B01G237300 chr1D 88.043 92 10 1 235 326 193449973 193449883 1.060000e-19 108.0
32 TraesCS4B01G237300 chr3A 79.638 221 31 7 1 209 90366320 90366102 2.250000e-31 147.0
33 TraesCS4B01G237300 chr3A 93.506 77 4 1 339 414 220639390 220639466 2.280000e-21 113.0
34 TraesCS4B01G237300 chr3A 76.531 196 30 9 15 207 719361537 719361719 2.970000e-15 93.5
35 TraesCS4B01G237300 chr2B 79.821 223 28 8 1 209 393022322 393022541 2.250000e-31 147.0
36 TraesCS4B01G237300 chr2B 90.361 83 5 3 339 419 3769167 3769248 3.820000e-19 106.0
37 TraesCS4B01G237300 chr7A 95.000 80 3 1 339 417 174590178 174590099 1.050000e-24 124.0
38 TraesCS4B01G237300 chr7A 82.540 126 12 4 210 325 4531931 4531806 4.940000e-18 102.0
39 TraesCS4B01G237300 chr7A 86.667 90 12 0 236 325 571939682 571939771 1.780000e-17 100.0
40 TraesCS4B01G237300 chr7A 85.714 91 13 0 235 325 732002192 732002282 2.300000e-16 97.1
41 TraesCS4B01G237300 chr5D 77.273 220 36 5 1 208 536281119 536280902 1.760000e-22 117.0
42 TraesCS4B01G237300 chr5D 83.594 128 11 6 208 325 377173479 377173352 8.210000e-21 111.0
43 TraesCS4B01G237300 chr5D 86.316 95 13 0 115 209 498646308 498646214 1.370000e-18 104.0
44 TraesCS4B01G237300 chr5D 86.813 91 12 0 235 325 464064431 464064521 4.940000e-18 102.0
45 TraesCS4B01G237300 chr5B 76.364 220 39 6 1 209 418980523 418980740 3.820000e-19 106.0
46 TraesCS4B01G237300 chr5B 88.506 87 10 0 240 326 696488830 696488744 3.820000e-19 106.0
47 TraesCS4B01G237300 chr7D 89.412 85 5 4 338 419 521766491 521766574 1.370000e-18 104.0
48 TraesCS4B01G237300 chr7D 74.886 219 31 16 1 209 549136603 549136807 8.320000e-11 78.7
49 TraesCS4B01G237300 chr7D 92.593 54 4 0 2599 2652 549701527 549701580 8.320000e-11 78.7
50 TraesCS4B01G237300 chr3D 86.957 92 10 2 235 325 59850095 59850185 4.940000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G237300 chr4B 495124890 495127692 2802 False 5177.000000 5177 100.000000 1 2803 1 chr4B.!!$F2 2802
1 TraesCS4B01G237300 chr4D 400785531 400787318 1787 False 1157.500000 1954 90.074000 415 2211 2 chr4D.!!$F1 1796
2 TraesCS4B01G237300 chr4A 58551575 58552680 1105 False 696.000000 1046 89.360000 426 1587 2 chr4A.!!$F1 1161
3 TraesCS4B01G237300 chr4A 58557979 58559912 1933 False 239.033333 329 92.400667 1593 2180 3 chr4A.!!$F2 587
4 TraesCS4B01G237300 chr1B 3267821 3268401 580 True 1002.000000 1002 97.762000 2223 2803 1 chr1B.!!$R1 580
5 TraesCS4B01G237300 chr6B 80052199 80052787 588 False 1000.000000 1000 97.284000 2212 2800 1 chr6B.!!$F2 588
6 TraesCS4B01G237300 chr6D 157482525 157483286 761 True 437.500000 527 93.361500 2212 2803 2 chr6D.!!$R3 591
7 TraesCS4B01G237300 chr2A 734390261 734391019 758 True 375.000000 435 89.038000 2212 2803 2 chr2A.!!$R3 591

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
706 713 0.033781 AACCATCCGTTCCGTTTCGA 59.966 50.0 0.0 0.0 0.0 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2382 3860 0.308376 TACAAAAAGTTCCGCCACGC 59.692 50.0 0.0 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.407340 ATAAGGTCCTCCCAGCCTAG 57.593 55.000 0.00 0.00 34.66 3.02
20 21 0.398664 TAAGGTCCTCCCAGCCTAGC 60.399 60.000 0.00 0.00 34.66 3.42
21 22 3.164977 GGTCCTCCCAGCCTAGCC 61.165 72.222 0.00 0.00 0.00 3.93
22 23 2.041405 GTCCTCCCAGCCTAGCCT 60.041 66.667 0.00 0.00 0.00 4.58
23 24 2.137528 GTCCTCCCAGCCTAGCCTC 61.138 68.421 0.00 0.00 0.00 4.70
24 25 2.846754 CCTCCCAGCCTAGCCTCC 60.847 72.222 0.00 0.00 0.00 4.30
25 26 2.041508 CTCCCAGCCTAGCCTCCA 60.042 66.667 0.00 0.00 0.00 3.86
26 27 1.461075 CTCCCAGCCTAGCCTCCAT 60.461 63.158 0.00 0.00 0.00 3.41
27 28 1.460305 TCCCAGCCTAGCCTCCATC 60.460 63.158 0.00 0.00 0.00 3.51
28 29 2.739784 CCAGCCTAGCCTCCATCG 59.260 66.667 0.00 0.00 0.00 3.84
29 30 2.739784 CAGCCTAGCCTCCATCGG 59.260 66.667 0.00 0.00 0.00 4.18
30 31 1.834378 CAGCCTAGCCTCCATCGGA 60.834 63.158 0.00 0.00 0.00 4.55
42 43 3.735237 TCCATCGGAGATGTTTCTAGC 57.265 47.619 8.91 0.00 45.12 3.42
43 44 3.031013 TCCATCGGAGATGTTTCTAGCA 58.969 45.455 8.91 0.00 45.12 3.49
44 45 3.643320 TCCATCGGAGATGTTTCTAGCAT 59.357 43.478 8.91 0.00 45.12 3.79
45 46 3.993081 CCATCGGAGATGTTTCTAGCATC 59.007 47.826 8.91 1.70 45.12 3.91
46 47 3.355626 TCGGAGATGTTTCTAGCATCG 57.644 47.619 3.95 0.00 45.25 3.84
47 48 2.688446 TCGGAGATGTTTCTAGCATCGT 59.312 45.455 3.95 0.00 45.25 3.73
48 49 3.046390 CGGAGATGTTTCTAGCATCGTC 58.954 50.000 3.95 0.00 45.25 4.20
49 50 3.046390 GGAGATGTTTCTAGCATCGTCG 58.954 50.000 3.95 0.00 45.25 5.12
50 51 3.046390 GAGATGTTTCTAGCATCGTCGG 58.954 50.000 0.00 0.00 45.25 4.79
51 52 2.688446 AGATGTTTCTAGCATCGTCGGA 59.312 45.455 0.00 0.00 45.25 4.55
52 53 2.561733 TGTTTCTAGCATCGTCGGAG 57.438 50.000 0.00 0.00 0.00 4.63
53 54 1.134367 TGTTTCTAGCATCGTCGGAGG 59.866 52.381 0.00 0.00 0.00 4.30
54 55 0.744874 TTTCTAGCATCGTCGGAGGG 59.255 55.000 0.00 0.00 0.00 4.30
55 56 1.735376 TTCTAGCATCGTCGGAGGGC 61.735 60.000 0.00 0.00 0.00 5.19
56 57 3.544167 CTAGCATCGTCGGAGGGCG 62.544 68.421 0.00 0.00 33.15 6.13
63 64 4.803426 GTCGGAGGGCGTGCAGAG 62.803 72.222 0.00 0.00 0.00 3.35
66 67 4.767255 GGAGGGCGTGCAGAGGTG 62.767 72.222 0.00 0.00 0.00 4.00
67 68 4.008933 GAGGGCGTGCAGAGGTGT 62.009 66.667 0.00 0.00 0.00 4.16
68 69 3.941657 GAGGGCGTGCAGAGGTGTC 62.942 68.421 0.00 0.00 0.00 3.67
69 70 4.008933 GGGCGTGCAGAGGTGTCT 62.009 66.667 0.00 0.00 0.00 3.41
78 79 1.517242 CAGAGGTGTCTGTCTTTGGC 58.483 55.000 0.00 0.00 44.72 4.52
79 80 1.131638 AGAGGTGTCTGTCTTTGGCA 58.868 50.000 0.00 0.00 0.00 4.92
80 81 1.071385 AGAGGTGTCTGTCTTTGGCAG 59.929 52.381 0.00 0.00 35.43 4.85
81 82 1.070758 GAGGTGTCTGTCTTTGGCAGA 59.929 52.381 0.00 0.00 40.28 4.26
82 83 1.701847 AGGTGTCTGTCTTTGGCAGAT 59.298 47.619 5.15 0.00 43.73 2.90
83 84 2.079925 GGTGTCTGTCTTTGGCAGATC 58.920 52.381 5.15 2.80 43.73 2.75
84 85 2.289945 GGTGTCTGTCTTTGGCAGATCT 60.290 50.000 5.15 0.00 43.73 2.75
85 86 2.999355 GTGTCTGTCTTTGGCAGATCTC 59.001 50.000 5.15 0.00 43.73 2.75
86 87 2.266554 GTCTGTCTTTGGCAGATCTCG 58.733 52.381 5.15 0.00 43.73 4.04
87 88 1.895798 TCTGTCTTTGGCAGATCTCGT 59.104 47.619 0.00 0.00 37.98 4.18
88 89 1.998315 CTGTCTTTGGCAGATCTCGTG 59.002 52.381 0.00 0.00 36.12 4.35
89 90 1.344438 TGTCTTTGGCAGATCTCGTGT 59.656 47.619 0.00 0.00 32.60 4.49
90 91 1.728971 GTCTTTGGCAGATCTCGTGTG 59.271 52.381 0.00 0.00 32.60 3.82
91 92 1.618343 TCTTTGGCAGATCTCGTGTGA 59.382 47.619 0.00 0.00 0.00 3.58
92 93 2.234661 TCTTTGGCAGATCTCGTGTGAT 59.765 45.455 0.00 0.00 0.00 3.06
93 94 2.299993 TTGGCAGATCTCGTGTGATC 57.700 50.000 0.00 4.21 42.18 2.92
100 101 2.927429 GATCTCGTGTGATCTGATCGG 58.073 52.381 12.65 0.00 39.61 4.18
101 102 0.382158 TCTCGTGTGATCTGATCGGC 59.618 55.000 12.65 8.71 0.00 5.54
102 103 0.101219 CTCGTGTGATCTGATCGGCA 59.899 55.000 12.65 10.98 0.00 5.69
103 104 0.746659 TCGTGTGATCTGATCGGCAT 59.253 50.000 12.65 0.00 0.00 4.40
104 105 1.136891 TCGTGTGATCTGATCGGCATT 59.863 47.619 12.65 0.00 0.00 3.56
105 106 1.935873 CGTGTGATCTGATCGGCATTT 59.064 47.619 12.65 0.00 0.00 2.32
106 107 2.286008 CGTGTGATCTGATCGGCATTTG 60.286 50.000 12.65 5.68 0.00 2.32
107 108 2.679837 GTGTGATCTGATCGGCATTTGT 59.320 45.455 12.65 0.00 0.00 2.83
108 109 2.938451 TGTGATCTGATCGGCATTTGTC 59.062 45.455 12.65 0.00 0.00 3.18
109 110 3.201290 GTGATCTGATCGGCATTTGTCT 58.799 45.455 12.65 0.00 0.00 3.41
110 111 3.624861 GTGATCTGATCGGCATTTGTCTT 59.375 43.478 12.65 0.00 0.00 3.01
111 112 3.873361 TGATCTGATCGGCATTTGTCTTC 59.127 43.478 12.65 0.00 0.00 2.87
112 113 2.270923 TCTGATCGGCATTTGTCTTCG 58.729 47.619 0.00 0.00 0.00 3.79
113 114 1.328680 CTGATCGGCATTTGTCTTCGG 59.671 52.381 0.00 0.00 0.00 4.30
114 115 1.338674 TGATCGGCATTTGTCTTCGGT 60.339 47.619 0.00 0.00 0.00 4.69
115 116 1.062587 GATCGGCATTTGTCTTCGGTG 59.937 52.381 0.00 0.00 0.00 4.94
116 117 0.953471 TCGGCATTTGTCTTCGGTGG 60.953 55.000 0.00 0.00 0.00 4.61
117 118 0.953471 CGGCATTTGTCTTCGGTGGA 60.953 55.000 0.00 0.00 0.00 4.02
118 119 1.463674 GGCATTTGTCTTCGGTGGAT 58.536 50.000 0.00 0.00 0.00 3.41
119 120 1.818674 GGCATTTGTCTTCGGTGGATT 59.181 47.619 0.00 0.00 0.00 3.01
120 121 2.159379 GGCATTTGTCTTCGGTGGATTC 60.159 50.000 0.00 0.00 0.00 2.52
121 122 2.487762 GCATTTGTCTTCGGTGGATTCA 59.512 45.455 0.00 0.00 0.00 2.57
122 123 3.426695 GCATTTGTCTTCGGTGGATTCAG 60.427 47.826 0.00 0.00 0.00 3.02
123 124 3.485463 TTTGTCTTCGGTGGATTCAGT 57.515 42.857 0.00 0.00 0.00 3.41
124 125 2.743636 TGTCTTCGGTGGATTCAGTC 57.256 50.000 0.00 0.00 0.00 3.51
125 126 2.248248 TGTCTTCGGTGGATTCAGTCT 58.752 47.619 0.00 0.00 0.00 3.24
126 127 2.632996 TGTCTTCGGTGGATTCAGTCTT 59.367 45.455 0.00 0.00 0.00 3.01
127 128 3.254892 GTCTTCGGTGGATTCAGTCTTC 58.745 50.000 0.00 0.00 0.00 2.87
128 129 2.094700 TCTTCGGTGGATTCAGTCTTCG 60.095 50.000 0.00 0.00 0.00 3.79
129 130 1.254026 TCGGTGGATTCAGTCTTCGT 58.746 50.000 0.00 0.00 0.00 3.85
130 131 1.616865 TCGGTGGATTCAGTCTTCGTT 59.383 47.619 0.00 0.00 0.00 3.85
131 132 1.726791 CGGTGGATTCAGTCTTCGTTG 59.273 52.381 0.00 0.00 0.00 4.10
132 133 2.076863 GGTGGATTCAGTCTTCGTTGG 58.923 52.381 0.00 0.00 0.00 3.77
133 134 2.550208 GGTGGATTCAGTCTTCGTTGGT 60.550 50.000 0.00 0.00 0.00 3.67
134 135 2.737252 GTGGATTCAGTCTTCGTTGGTC 59.263 50.000 0.00 0.00 0.00 4.02
135 136 2.632996 TGGATTCAGTCTTCGTTGGTCT 59.367 45.455 0.00 0.00 0.00 3.85
136 137 3.830178 TGGATTCAGTCTTCGTTGGTCTA 59.170 43.478 0.00 0.00 0.00 2.59
137 138 4.174762 GGATTCAGTCTTCGTTGGTCTAC 58.825 47.826 0.00 0.00 0.00 2.59
138 139 2.983402 TCAGTCTTCGTTGGTCTACG 57.017 50.000 0.00 0.00 42.68 3.51
139 140 1.068748 TCAGTCTTCGTTGGTCTACGC 60.069 52.381 0.46 0.00 41.16 4.42
140 141 1.068472 CAGTCTTCGTTGGTCTACGCT 60.068 52.381 0.46 0.00 41.16 5.07
141 142 1.612463 AGTCTTCGTTGGTCTACGCTT 59.388 47.619 0.46 0.00 41.16 4.68
142 143 2.816087 AGTCTTCGTTGGTCTACGCTTA 59.184 45.455 0.46 0.00 41.16 3.09
143 144 3.442977 AGTCTTCGTTGGTCTACGCTTAT 59.557 43.478 0.46 0.00 41.16 1.73
144 145 4.637534 AGTCTTCGTTGGTCTACGCTTATA 59.362 41.667 0.46 0.00 41.16 0.98
145 146 5.298777 AGTCTTCGTTGGTCTACGCTTATAT 59.701 40.000 0.46 0.00 41.16 0.86
146 147 5.398711 GTCTTCGTTGGTCTACGCTTATATG 59.601 44.000 0.46 0.00 41.16 1.78
147 148 4.906065 TCGTTGGTCTACGCTTATATGT 57.094 40.909 0.46 0.00 41.16 2.29
148 149 4.852138 TCGTTGGTCTACGCTTATATGTC 58.148 43.478 0.46 0.00 41.16 3.06
149 150 4.577693 TCGTTGGTCTACGCTTATATGTCT 59.422 41.667 0.46 0.00 41.16 3.41
150 151 4.675565 CGTTGGTCTACGCTTATATGTCTG 59.324 45.833 0.00 0.00 34.45 3.51
151 152 4.238761 TGGTCTACGCTTATATGTCTGC 57.761 45.455 0.00 0.00 0.00 4.26
152 153 3.634910 TGGTCTACGCTTATATGTCTGCA 59.365 43.478 0.00 0.00 0.00 4.41
153 154 4.230657 GGTCTACGCTTATATGTCTGCAG 58.769 47.826 7.63 7.63 0.00 4.41
154 155 4.230657 GTCTACGCTTATATGTCTGCAGG 58.769 47.826 15.13 0.00 0.00 4.85
155 156 3.889538 TCTACGCTTATATGTCTGCAGGT 59.110 43.478 15.13 3.08 0.00 4.00
156 157 3.543680 ACGCTTATATGTCTGCAGGTT 57.456 42.857 15.13 1.39 0.00 3.50
157 158 3.198068 ACGCTTATATGTCTGCAGGTTG 58.802 45.455 15.13 0.00 0.00 3.77
158 159 2.545526 CGCTTATATGTCTGCAGGTTGG 59.454 50.000 15.13 0.00 0.00 3.77
159 160 3.741075 CGCTTATATGTCTGCAGGTTGGA 60.741 47.826 15.13 0.00 0.00 3.53
160 161 4.392940 GCTTATATGTCTGCAGGTTGGAT 58.607 43.478 15.13 4.23 0.00 3.41
161 162 4.453819 GCTTATATGTCTGCAGGTTGGATC 59.546 45.833 15.13 0.00 0.00 3.36
162 163 3.498774 ATATGTCTGCAGGTTGGATCC 57.501 47.619 15.13 4.20 0.00 3.36
163 164 1.293062 ATGTCTGCAGGTTGGATCCT 58.707 50.000 15.13 0.00 38.51 3.24
164 165 1.067295 TGTCTGCAGGTTGGATCCTT 58.933 50.000 15.13 0.00 35.37 3.36
165 166 1.003580 TGTCTGCAGGTTGGATCCTTC 59.996 52.381 15.13 5.77 35.37 3.46
166 167 0.620556 TCTGCAGGTTGGATCCTTCC 59.379 55.000 15.13 14.69 42.94 3.46
167 168 0.745845 CTGCAGGTTGGATCCTTCCG 60.746 60.000 14.23 11.79 45.89 4.30
168 169 1.198094 TGCAGGTTGGATCCTTCCGA 61.198 55.000 14.23 2.83 45.89 4.55
169 170 0.181350 GCAGGTTGGATCCTTCCGAT 59.819 55.000 14.23 0.00 45.89 4.18
170 171 1.811941 GCAGGTTGGATCCTTCCGATC 60.812 57.143 14.23 6.33 45.89 3.69
171 172 1.765314 CAGGTTGGATCCTTCCGATCT 59.235 52.381 14.23 0.00 46.42 2.75
172 173 2.965831 CAGGTTGGATCCTTCCGATCTA 59.034 50.000 14.23 0.00 44.03 1.98
173 174 3.006323 CAGGTTGGATCCTTCCGATCTAG 59.994 52.174 14.23 0.00 44.03 2.43
174 175 3.117093 AGGTTGGATCCTTCCGATCTAGA 60.117 47.826 14.23 0.00 44.03 2.43
175 176 3.006003 GGTTGGATCCTTCCGATCTAGAC 59.994 52.174 14.23 0.00 45.90 2.59
176 177 3.885976 TGGATCCTTCCGATCTAGACT 57.114 47.619 14.23 0.00 45.90 3.24
177 178 4.186077 TGGATCCTTCCGATCTAGACTT 57.814 45.455 14.23 0.00 45.90 3.01
178 179 4.145807 TGGATCCTTCCGATCTAGACTTC 58.854 47.826 14.23 0.00 45.90 3.01
179 180 4.141135 TGGATCCTTCCGATCTAGACTTCT 60.141 45.833 14.23 0.00 45.90 2.85
180 181 4.457949 GGATCCTTCCGATCTAGACTTCTC 59.542 50.000 3.84 0.00 45.90 2.87
181 182 4.781775 TCCTTCCGATCTAGACTTCTCT 57.218 45.455 0.00 0.00 0.00 3.10
182 183 5.118729 TCCTTCCGATCTAGACTTCTCTT 57.881 43.478 0.00 0.00 0.00 2.85
183 184 5.127491 TCCTTCCGATCTAGACTTCTCTTC 58.873 45.833 0.00 0.00 0.00 2.87
184 185 4.884744 CCTTCCGATCTAGACTTCTCTTCA 59.115 45.833 0.00 0.00 0.00 3.02
185 186 5.534654 CCTTCCGATCTAGACTTCTCTTCAT 59.465 44.000 0.00 0.00 0.00 2.57
186 187 6.293955 CCTTCCGATCTAGACTTCTCTTCATC 60.294 46.154 0.00 0.00 0.00 2.92
187 188 4.752604 TCCGATCTAGACTTCTCTTCATCG 59.247 45.833 0.00 0.00 36.99 3.84
188 189 4.083537 CCGATCTAGACTTCTCTTCATCGG 60.084 50.000 9.07 9.07 43.61 4.18
189 190 4.513692 CGATCTAGACTTCTCTTCATCGGT 59.486 45.833 0.00 0.00 35.31 4.69
190 191 5.559991 CGATCTAGACTTCTCTTCATCGGTG 60.560 48.000 0.00 0.00 35.31 4.94
191 192 3.948473 TCTAGACTTCTCTTCATCGGTGG 59.052 47.826 0.00 0.00 0.00 4.61
192 193 1.205893 AGACTTCTCTTCATCGGTGGC 59.794 52.381 0.00 0.00 0.00 5.01
193 194 0.108615 ACTTCTCTTCATCGGTGGCG 60.109 55.000 0.00 0.00 0.00 5.69
194 195 0.807667 CTTCTCTTCATCGGTGGCGG 60.808 60.000 0.00 0.00 0.00 6.13
195 196 1.541310 TTCTCTTCATCGGTGGCGGT 61.541 55.000 0.00 0.00 0.00 5.68
196 197 1.079127 CTCTTCATCGGTGGCGGTT 60.079 57.895 0.00 0.00 0.00 4.44
197 198 1.361668 CTCTTCATCGGTGGCGGTTG 61.362 60.000 0.00 0.00 0.00 3.77
198 199 3.039202 CTTCATCGGTGGCGGTTGC 62.039 63.158 0.00 0.00 41.71 4.17
199 200 3.545124 TTCATCGGTGGCGGTTGCT 62.545 57.895 0.00 0.00 42.25 3.91
200 201 3.803082 CATCGGTGGCGGTTGCTG 61.803 66.667 0.00 0.00 42.25 4.41
201 202 4.329545 ATCGGTGGCGGTTGCTGT 62.330 61.111 0.00 0.00 42.25 4.40
202 203 3.842925 ATCGGTGGCGGTTGCTGTT 62.843 57.895 0.00 0.00 42.25 3.16
203 204 4.025401 CGGTGGCGGTTGCTGTTC 62.025 66.667 0.00 0.00 42.25 3.18
204 205 2.594592 GGTGGCGGTTGCTGTTCT 60.595 61.111 0.00 0.00 42.25 3.01
205 206 2.639286 GTGGCGGTTGCTGTTCTG 59.361 61.111 0.00 0.00 42.25 3.02
206 207 2.594303 TGGCGGTTGCTGTTCTGG 60.594 61.111 0.00 0.00 42.25 3.86
207 208 2.594592 GGCGGTTGCTGTTCTGGT 60.595 61.111 0.00 0.00 42.25 4.00
208 209 2.639286 GCGGTTGCTGTTCTGGTG 59.361 61.111 0.00 0.00 38.39 4.17
209 210 2.908073 GCGGTTGCTGTTCTGGTGG 61.908 63.158 0.00 0.00 38.39 4.61
210 211 1.227823 CGGTTGCTGTTCTGGTGGA 60.228 57.895 0.00 0.00 0.00 4.02
211 212 1.507141 CGGTTGCTGTTCTGGTGGAC 61.507 60.000 0.00 0.00 0.00 4.02
212 213 0.179018 GGTTGCTGTTCTGGTGGACT 60.179 55.000 0.00 0.00 0.00 3.85
213 214 0.947244 GTTGCTGTTCTGGTGGACTG 59.053 55.000 0.00 0.00 0.00 3.51
214 215 0.819259 TTGCTGTTCTGGTGGACTGC 60.819 55.000 0.00 0.00 0.00 4.40
215 216 1.968540 GCTGTTCTGGTGGACTGCC 60.969 63.158 0.00 0.00 0.00 4.85
216 217 1.757306 CTGTTCTGGTGGACTGCCT 59.243 57.895 0.00 0.00 34.31 4.75
217 218 0.976641 CTGTTCTGGTGGACTGCCTA 59.023 55.000 0.00 0.00 34.31 3.93
218 219 0.685097 TGTTCTGGTGGACTGCCTAC 59.315 55.000 0.00 0.00 34.31 3.18
219 220 0.977395 GTTCTGGTGGACTGCCTACT 59.023 55.000 0.00 0.00 34.31 2.57
220 221 2.176889 GTTCTGGTGGACTGCCTACTA 58.823 52.381 0.00 0.00 34.31 1.82
221 222 1.848652 TCTGGTGGACTGCCTACTAC 58.151 55.000 0.00 0.00 34.31 2.73
222 223 1.076513 TCTGGTGGACTGCCTACTACA 59.923 52.381 0.00 0.00 34.31 2.74
223 224 1.899814 CTGGTGGACTGCCTACTACAA 59.100 52.381 0.00 0.00 34.31 2.41
224 225 1.621814 TGGTGGACTGCCTACTACAAC 59.378 52.381 0.00 0.00 34.31 3.32
225 226 1.621814 GGTGGACTGCCTACTACAACA 59.378 52.381 0.00 0.00 34.31 3.33
226 227 2.038033 GGTGGACTGCCTACTACAACAA 59.962 50.000 0.00 0.00 34.31 2.83
227 228 3.307480 GGTGGACTGCCTACTACAACAAT 60.307 47.826 0.00 0.00 34.31 2.71
228 229 3.684788 GTGGACTGCCTACTACAACAATG 59.315 47.826 0.00 0.00 34.31 2.82
229 230 3.326588 TGGACTGCCTACTACAACAATGT 59.673 43.478 0.00 0.00 38.14 2.71
230 231 4.202419 TGGACTGCCTACTACAACAATGTT 60.202 41.667 0.00 0.00 36.65 2.71
231 232 4.760204 GGACTGCCTACTACAACAATGTTT 59.240 41.667 0.00 0.00 41.05 2.83
232 233 5.106673 GGACTGCCTACTACAACAATGTTTC 60.107 44.000 0.00 0.00 41.05 2.78
233 234 4.760204 ACTGCCTACTACAACAATGTTTCC 59.240 41.667 0.00 0.00 41.05 3.13
234 235 4.980573 TGCCTACTACAACAATGTTTCCT 58.019 39.130 0.00 0.00 41.05 3.36
235 236 4.759693 TGCCTACTACAACAATGTTTCCTG 59.240 41.667 0.00 0.00 41.05 3.86
236 237 5.001232 GCCTACTACAACAATGTTTCCTGA 58.999 41.667 0.00 0.00 41.05 3.86
237 238 5.106673 GCCTACTACAACAATGTTTCCTGAC 60.107 44.000 0.00 0.00 41.05 3.51
238 239 5.120208 CCTACTACAACAATGTTTCCTGACG 59.880 44.000 0.00 0.00 41.05 4.35
239 240 3.813166 ACTACAACAATGTTTCCTGACGG 59.187 43.478 0.00 0.00 41.05 4.79
240 241 2.925724 ACAACAATGTTTCCTGACGGA 58.074 42.857 0.00 0.00 35.91 4.69
241 242 2.878406 ACAACAATGTTTCCTGACGGAG 59.122 45.455 0.00 0.00 35.91 4.63
242 243 2.185004 ACAATGTTTCCTGACGGAGG 57.815 50.000 0.00 0.00 44.45 4.30
243 244 1.271379 ACAATGTTTCCTGACGGAGGG 60.271 52.381 3.12 0.00 43.06 4.30
244 245 1.003118 CAATGTTTCCTGACGGAGGGA 59.997 52.381 3.12 0.00 43.06 4.20
245 246 0.613777 ATGTTTCCTGACGGAGGGAC 59.386 55.000 3.12 3.85 43.06 4.46
246 247 1.080025 GTTTCCTGACGGAGGGACG 60.080 63.158 3.12 0.00 43.06 4.79
247 248 1.228644 TTTCCTGACGGAGGGACGA 60.229 57.895 3.12 0.00 43.06 4.20
248 249 0.613853 TTTCCTGACGGAGGGACGAT 60.614 55.000 3.12 0.00 43.06 3.73
249 250 1.320344 TTCCTGACGGAGGGACGATG 61.320 60.000 3.12 0.00 43.06 3.84
250 251 1.753078 CCTGACGGAGGGACGATGA 60.753 63.158 0.00 0.00 38.36 2.92
251 252 1.433879 CTGACGGAGGGACGATGAC 59.566 63.158 0.00 0.00 37.61 3.06
252 253 2.324332 CTGACGGAGGGACGATGACG 62.324 65.000 0.00 0.00 45.75 4.35
253 254 2.045634 ACGGAGGGACGATGACGA 60.046 61.111 0.00 0.00 42.66 4.20
254 255 2.320339 GACGGAGGGACGATGACGAC 62.320 65.000 0.00 0.00 42.66 4.34
255 256 2.408022 GGAGGGACGATGACGACG 59.592 66.667 0.00 0.00 42.66 5.12
256 257 2.408022 GAGGGACGATGACGACGG 59.592 66.667 0.00 0.00 42.66 4.79
257 258 3.753070 GAGGGACGATGACGACGGC 62.753 68.421 0.00 0.00 42.66 5.68
277 278 3.130160 GCCTTCGGCTTGCTCCAG 61.130 66.667 0.00 0.00 46.69 3.86
278 279 2.348998 CCTTCGGCTTGCTCCAGT 59.651 61.111 0.00 0.00 0.00 4.00
279 280 2.037136 CCTTCGGCTTGCTCCAGTG 61.037 63.158 0.00 0.00 0.00 3.66
280 281 2.669569 TTCGGCTTGCTCCAGTGC 60.670 61.111 0.00 0.00 0.00 4.40
281 282 3.182590 TTCGGCTTGCTCCAGTGCT 62.183 57.895 0.00 0.00 0.00 4.40
282 283 2.670934 CGGCTTGCTCCAGTGCTT 60.671 61.111 0.00 0.00 0.00 3.91
283 284 2.960170 GGCTTGCTCCAGTGCTTG 59.040 61.111 0.00 0.00 0.00 4.01
284 285 1.900498 GGCTTGCTCCAGTGCTTGT 60.900 57.895 0.00 0.00 0.00 3.16
285 286 1.458639 GGCTTGCTCCAGTGCTTGTT 61.459 55.000 0.00 0.00 0.00 2.83
286 287 0.318445 GCTTGCTCCAGTGCTTGTTG 60.318 55.000 0.00 0.00 0.00 3.33
287 288 1.027357 CTTGCTCCAGTGCTTGTTGT 58.973 50.000 0.00 0.00 0.00 3.32
288 289 1.002033 CTTGCTCCAGTGCTTGTTGTC 60.002 52.381 0.00 0.00 0.00 3.18
289 290 1.159713 TGCTCCAGTGCTTGTTGTCG 61.160 55.000 0.00 0.00 0.00 4.35
290 291 1.160329 GCTCCAGTGCTTGTTGTCGT 61.160 55.000 0.00 0.00 0.00 4.34
291 292 0.861837 CTCCAGTGCTTGTTGTCGTC 59.138 55.000 0.00 0.00 0.00 4.20
292 293 0.464036 TCCAGTGCTTGTTGTCGTCT 59.536 50.000 0.00 0.00 0.00 4.18
293 294 0.861837 CCAGTGCTTGTTGTCGTCTC 59.138 55.000 0.00 0.00 0.00 3.36
294 295 1.539065 CCAGTGCTTGTTGTCGTCTCT 60.539 52.381 0.00 0.00 0.00 3.10
295 296 2.288213 CCAGTGCTTGTTGTCGTCTCTA 60.288 50.000 0.00 0.00 0.00 2.43
296 297 2.983136 CAGTGCTTGTTGTCGTCTCTAG 59.017 50.000 0.00 0.00 0.00 2.43
297 298 2.029828 AGTGCTTGTTGTCGTCTCTAGG 60.030 50.000 0.00 0.00 0.00 3.02
298 299 1.961394 TGCTTGTTGTCGTCTCTAGGT 59.039 47.619 0.00 0.00 0.00 3.08
299 300 3.057736 GTGCTTGTTGTCGTCTCTAGGTA 60.058 47.826 0.00 0.00 0.00 3.08
300 301 3.190744 TGCTTGTTGTCGTCTCTAGGTAG 59.809 47.826 0.00 0.00 0.00 3.18
301 302 3.190953 GCTTGTTGTCGTCTCTAGGTAGT 59.809 47.826 0.00 0.00 0.00 2.73
302 303 4.672283 GCTTGTTGTCGTCTCTAGGTAGTC 60.672 50.000 0.00 0.00 0.00 2.59
303 304 4.283363 TGTTGTCGTCTCTAGGTAGTCT 57.717 45.455 0.00 0.00 0.00 3.24
304 305 5.411831 TGTTGTCGTCTCTAGGTAGTCTA 57.588 43.478 0.00 0.00 0.00 2.59
305 306 5.174395 TGTTGTCGTCTCTAGGTAGTCTAC 58.826 45.833 0.95 0.95 0.00 2.59
306 307 5.174395 GTTGTCGTCTCTAGGTAGTCTACA 58.826 45.833 12.08 0.00 0.00 2.74
307 308 5.411831 TGTCGTCTCTAGGTAGTCTACAA 57.588 43.478 12.08 0.00 0.00 2.41
308 309 5.798132 TGTCGTCTCTAGGTAGTCTACAAA 58.202 41.667 12.08 0.00 0.00 2.83
309 310 5.641209 TGTCGTCTCTAGGTAGTCTACAAAC 59.359 44.000 12.08 0.00 0.00 2.93
310 311 5.064579 GTCGTCTCTAGGTAGTCTACAAACC 59.935 48.000 12.08 0.00 0.00 3.27
311 312 5.046014 TCGTCTCTAGGTAGTCTACAAACCT 60.046 44.000 12.08 4.91 45.53 3.50
312 313 5.064962 CGTCTCTAGGTAGTCTACAAACCTG 59.935 48.000 12.08 7.25 43.47 4.00
313 314 6.179040 GTCTCTAGGTAGTCTACAAACCTGA 58.821 44.000 12.08 9.95 43.47 3.86
314 315 6.658391 GTCTCTAGGTAGTCTACAAACCTGAA 59.342 42.308 12.08 4.89 43.47 3.02
315 316 7.339976 GTCTCTAGGTAGTCTACAAACCTGAAT 59.660 40.741 12.08 0.00 43.47 2.57
316 317 7.339721 TCTCTAGGTAGTCTACAAACCTGAATG 59.660 40.741 12.08 5.55 43.47 2.67
317 318 6.952358 TCTAGGTAGTCTACAAACCTGAATGT 59.048 38.462 12.08 0.00 43.47 2.71
318 319 8.111545 TCTAGGTAGTCTACAAACCTGAATGTA 58.888 37.037 12.08 0.00 43.47 2.29
319 320 7.549147 AGGTAGTCTACAAACCTGAATGTAA 57.451 36.000 12.08 0.00 42.08 2.41
320 321 8.147244 AGGTAGTCTACAAACCTGAATGTAAT 57.853 34.615 12.08 0.00 42.08 1.89
321 322 8.603304 AGGTAGTCTACAAACCTGAATGTAATT 58.397 33.333 12.08 0.00 42.08 1.40
322 323 9.227777 GGTAGTCTACAAACCTGAATGTAATTT 57.772 33.333 12.08 0.00 36.07 1.82
346 347 6.532365 TTTTTGCGGGTGAAAATGTAATTC 57.468 33.333 0.00 0.00 33.67 2.17
347 348 5.461032 TTTGCGGGTGAAAATGTAATTCT 57.539 34.783 0.00 0.00 33.67 2.40
348 349 5.461032 TTGCGGGTGAAAATGTAATTCTT 57.539 34.783 0.00 0.00 33.67 2.52
349 350 6.576662 TTGCGGGTGAAAATGTAATTCTTA 57.423 33.333 0.00 0.00 33.67 2.10
350 351 5.945155 TGCGGGTGAAAATGTAATTCTTAC 58.055 37.500 0.00 0.00 33.67 2.34
351 352 5.708230 TGCGGGTGAAAATGTAATTCTTACT 59.292 36.000 0.00 0.00 33.67 2.24
352 353 6.207810 TGCGGGTGAAAATGTAATTCTTACTT 59.792 34.615 0.00 0.00 33.67 2.24
353 354 6.745907 GCGGGTGAAAATGTAATTCTTACTTC 59.254 38.462 0.00 0.00 33.67 3.01
354 355 7.361799 GCGGGTGAAAATGTAATTCTTACTTCT 60.362 37.037 0.00 0.00 33.67 2.85
355 356 7.962918 CGGGTGAAAATGTAATTCTTACTTCTG 59.037 37.037 0.00 0.00 33.67 3.02
356 357 8.244113 GGGTGAAAATGTAATTCTTACTTCTGG 58.756 37.037 0.00 0.00 33.67 3.86
357 358 8.793592 GGTGAAAATGTAATTCTTACTTCTGGT 58.206 33.333 0.00 0.00 33.67 4.00
358 359 9.612620 GTGAAAATGTAATTCTTACTTCTGGTG 57.387 33.333 0.00 0.00 33.67 4.17
359 360 9.349713 TGAAAATGTAATTCTTACTTCTGGTGT 57.650 29.630 0.00 0.00 33.67 4.16
362 363 9.574516 AAATGTAATTCTTACTTCTGGTGTTCT 57.425 29.630 0.00 0.00 33.67 3.01
363 364 9.574516 AATGTAATTCTTACTTCTGGTGTTCTT 57.425 29.630 0.00 0.00 37.06 2.52
364 365 8.974060 TGTAATTCTTACTTCTGGTGTTCTTT 57.026 30.769 0.00 0.00 37.06 2.52
365 366 8.836413 TGTAATTCTTACTTCTGGTGTTCTTTG 58.164 33.333 0.00 0.00 37.06 2.77
366 367 7.881775 AATTCTTACTTCTGGTGTTCTTTGT 57.118 32.000 0.00 0.00 0.00 2.83
367 368 8.974060 AATTCTTACTTCTGGTGTTCTTTGTA 57.026 30.769 0.00 0.00 0.00 2.41
368 369 7.781548 TTCTTACTTCTGGTGTTCTTTGTAC 57.218 36.000 0.00 0.00 0.00 2.90
369 370 7.120923 TCTTACTTCTGGTGTTCTTTGTACT 57.879 36.000 0.00 0.00 0.00 2.73
370 371 8.241497 TCTTACTTCTGGTGTTCTTTGTACTA 57.759 34.615 0.00 0.00 0.00 1.82
371 372 8.139989 TCTTACTTCTGGTGTTCTTTGTACTAC 58.860 37.037 0.00 0.00 0.00 2.73
372 373 5.608449 ACTTCTGGTGTTCTTTGTACTACC 58.392 41.667 0.00 0.00 0.00 3.18
373 374 5.365895 ACTTCTGGTGTTCTTTGTACTACCT 59.634 40.000 0.00 0.00 0.00 3.08
374 375 5.881923 TCTGGTGTTCTTTGTACTACCTT 57.118 39.130 0.00 0.00 0.00 3.50
375 376 5.607477 TCTGGTGTTCTTTGTACTACCTTG 58.393 41.667 0.00 0.00 0.00 3.61
376 377 5.364446 TCTGGTGTTCTTTGTACTACCTTGA 59.636 40.000 0.00 0.00 0.00 3.02
377 378 6.042781 TCTGGTGTTCTTTGTACTACCTTGAT 59.957 38.462 0.00 0.00 0.00 2.57
378 379 7.233962 TCTGGTGTTCTTTGTACTACCTTGATA 59.766 37.037 0.00 0.00 0.00 2.15
379 380 7.913789 TGGTGTTCTTTGTACTACCTTGATAT 58.086 34.615 0.00 0.00 0.00 1.63
380 381 8.380099 TGGTGTTCTTTGTACTACCTTGATATT 58.620 33.333 0.00 0.00 0.00 1.28
381 382 9.227777 GGTGTTCTTTGTACTACCTTGATATTT 57.772 33.333 0.00 0.00 0.00 1.40
442 443 2.037772 ACATCATCATCTACTTCCGGGC 59.962 50.000 0.00 0.00 0.00 6.13
449 450 0.611714 TCTACTTCCGGGCAAAGGAC 59.388 55.000 0.00 0.00 37.53 3.85
451 452 0.611714 TACTTCCGGGCAAAGGACTC 59.388 55.000 0.00 0.00 37.53 3.36
463 464 0.249741 AAGGACTCCGGACACAAACG 60.250 55.000 0.00 0.00 0.00 3.60
474 475 0.398696 ACACAAACGGGCCATGACTA 59.601 50.000 4.39 0.00 0.00 2.59
518 521 2.291741 CCAAGAAAGAAGCGAGCTTTGT 59.708 45.455 11.92 0.03 35.83 2.83
557 560 1.797211 TTAAACCCCGCCGCTGTTTG 61.797 55.000 11.03 0.00 34.33 2.93
612 618 0.035247 ACCTCCGAGCTAAGACGTCT 60.035 55.000 13.58 13.58 0.00 4.18
648 654 2.752075 AAACCACCCGTTTCCCTTTA 57.248 45.000 0.00 0.00 40.86 1.85
656 663 1.232119 CGTTTCCCTTTAGTTGCCGT 58.768 50.000 0.00 0.00 0.00 5.68
657 664 1.069500 CGTTTCCCTTTAGTTGCCGTG 60.069 52.381 0.00 0.00 0.00 4.94
687 694 8.742777 CATAGTTTTCTCCTTGAATTCAATCCA 58.257 33.333 20.76 7.38 35.02 3.41
688 695 7.601705 AGTTTTCTCCTTGAATTCAATCCAA 57.398 32.000 20.76 9.09 35.02 3.53
689 696 7.436933 AGTTTTCTCCTTGAATTCAATCCAAC 58.563 34.615 20.76 15.87 35.02 3.77
690 697 5.982890 TTCTCCTTGAATTCAATCCAACC 57.017 39.130 20.76 0.00 35.02 3.77
691 698 4.996793 TCTCCTTGAATTCAATCCAACCA 58.003 39.130 20.76 0.00 35.02 3.67
692 699 5.582953 TCTCCTTGAATTCAATCCAACCAT 58.417 37.500 20.76 0.00 35.02 3.55
693 700 5.653769 TCTCCTTGAATTCAATCCAACCATC 59.346 40.000 20.76 0.00 35.02 3.51
694 701 4.711355 TCCTTGAATTCAATCCAACCATCC 59.289 41.667 20.76 0.00 35.02 3.51
695 702 4.440525 CCTTGAATTCAATCCAACCATCCG 60.441 45.833 20.76 5.19 35.02 4.18
696 703 3.696045 TGAATTCAATCCAACCATCCGT 58.304 40.909 5.45 0.00 0.00 4.69
697 704 4.085733 TGAATTCAATCCAACCATCCGTT 58.914 39.130 5.45 0.00 33.90 4.44
698 705 4.157656 TGAATTCAATCCAACCATCCGTTC 59.842 41.667 5.45 0.00 29.93 3.95
699 706 2.122783 TCAATCCAACCATCCGTTCC 57.877 50.000 0.00 0.00 29.93 3.62
700 707 0.732571 CAATCCAACCATCCGTTCCG 59.267 55.000 0.00 0.00 29.93 4.30
701 708 0.326927 AATCCAACCATCCGTTCCGT 59.673 50.000 0.00 0.00 29.93 4.69
702 709 0.326927 ATCCAACCATCCGTTCCGTT 59.673 50.000 0.00 0.00 29.93 4.44
703 710 0.108963 TCCAACCATCCGTTCCGTTT 59.891 50.000 0.00 0.00 29.93 3.60
704 711 0.519961 CCAACCATCCGTTCCGTTTC 59.480 55.000 0.00 0.00 29.93 2.78
705 712 0.165079 CAACCATCCGTTCCGTTTCG 59.835 55.000 0.00 0.00 29.93 3.46
706 713 0.033781 AACCATCCGTTCCGTTTCGA 59.966 50.000 0.00 0.00 0.00 3.71
707 714 0.033781 ACCATCCGTTCCGTTTCGAA 59.966 50.000 0.00 0.00 0.00 3.71
708 715 1.149987 CCATCCGTTCCGTTTCGAAA 58.850 50.000 6.47 6.47 0.00 3.46
709 716 1.532007 CCATCCGTTCCGTTTCGAAAA 59.468 47.619 13.10 0.00 0.00 2.29
710 717 2.031857 CCATCCGTTCCGTTTCGAAAAA 60.032 45.455 13.10 0.28 0.00 1.94
756 763 2.743928 GCCTGTTCAGTGCTCCGG 60.744 66.667 0.00 0.00 0.00 5.14
965 974 2.009051 CACTCACGCATCATAGCCAAA 58.991 47.619 0.00 0.00 0.00 3.28
986 995 0.909623 TAAGCGGGAAGGAAGGAAGG 59.090 55.000 0.00 0.00 0.00 3.46
987 996 1.853250 AAGCGGGAAGGAAGGAAGGG 61.853 60.000 0.00 0.00 0.00 3.95
988 997 2.298661 GCGGGAAGGAAGGAAGGGA 61.299 63.158 0.00 0.00 0.00 4.20
989 998 1.908483 CGGGAAGGAAGGAAGGGAG 59.092 63.158 0.00 0.00 0.00 4.30
1123 1132 3.181489 CCGCTTCTTCCTCAAGTACGTAT 60.181 47.826 0.00 0.00 0.00 3.06
1124 1133 4.036027 CCGCTTCTTCCTCAAGTACGTATA 59.964 45.833 0.00 0.00 0.00 1.47
1125 1134 4.968788 CGCTTCTTCCTCAAGTACGTATAC 59.031 45.833 0.00 0.00 0.00 1.47
1126 1135 4.968788 GCTTCTTCCTCAAGTACGTATACG 59.031 45.833 23.24 23.24 46.33 3.06
1144 1158 7.820648 CGTATACGTACCCTACCATTTCTTAT 58.179 38.462 17.16 0.00 34.11 1.73
1187 1209 1.263484 CGATGCATCTCCTTGACATGC 59.737 52.381 23.73 0.00 38.60 4.06
1188 1210 3.961582 TGCATCTCCTTGACATGCA 57.038 47.368 3.36 3.36 44.71 3.96
1189 1211 2.430248 TGCATCTCCTTGACATGCAT 57.570 45.000 3.36 0.00 42.46 3.96
1190 1212 2.021457 TGCATCTCCTTGACATGCATG 58.979 47.619 25.09 25.09 42.46 4.06
1232 1254 2.508439 TTTGAGATCGCGCCGTCC 60.508 61.111 0.00 0.00 0.00 4.79
1359 1381 4.152647 TGCATCTCCCAACGATCTACTAT 58.847 43.478 0.00 0.00 0.00 2.12
1360 1382 5.321927 TGCATCTCCCAACGATCTACTATA 58.678 41.667 0.00 0.00 0.00 1.31
1361 1383 5.952347 TGCATCTCCCAACGATCTACTATAT 59.048 40.000 0.00 0.00 0.00 0.86
1362 1384 7.116736 TGCATCTCCCAACGATCTACTATATA 58.883 38.462 0.00 0.00 0.00 0.86
1385 1423 3.063510 ACTCCATGACTGACCAATGTG 57.936 47.619 0.00 0.00 0.00 3.21
1386 1424 2.373169 ACTCCATGACTGACCAATGTGT 59.627 45.455 0.00 0.00 0.00 3.72
1387 1425 3.582647 ACTCCATGACTGACCAATGTGTA 59.417 43.478 0.00 0.00 0.00 2.90
1388 1426 4.225942 ACTCCATGACTGACCAATGTGTAT 59.774 41.667 0.00 0.00 0.00 2.29
1389 1427 4.516323 TCCATGACTGACCAATGTGTATG 58.484 43.478 0.00 0.00 0.00 2.39
1390 1428 4.019411 TCCATGACTGACCAATGTGTATGT 60.019 41.667 0.00 0.00 0.00 2.29
1440 1478 4.662961 CAGACGTGTGAGGCGGCA 62.663 66.667 13.08 0.00 40.33 5.69
1503 1541 4.479993 CTGAAGAGGCTGGGCGGG 62.480 72.222 0.00 0.00 0.00 6.13
1545 1583 1.457346 CAGATGGCCACTTTGAGGTC 58.543 55.000 8.16 0.00 0.00 3.85
1546 1584 0.329596 AGATGGCCACTTTGAGGTCC 59.670 55.000 8.16 0.00 0.00 4.46
1557 1595 0.534203 TTGAGGTCCGTTCACTTGCC 60.534 55.000 0.00 0.00 0.00 4.52
1560 1598 2.112297 GTCCGTTCACTTGCCCCA 59.888 61.111 0.00 0.00 0.00 4.96
1562 1600 0.893727 GTCCGTTCACTTGCCCCATT 60.894 55.000 0.00 0.00 0.00 3.16
1573 1611 1.223487 GCCCCATTAGCCTCGTGAA 59.777 57.895 0.00 0.00 0.00 3.18
1591 1632 6.947258 TCGTGAATTGTTATAGCATGACATG 58.053 36.000 11.27 11.27 0.00 3.21
1624 1665 6.913132 TGTTTGATTTTGCATTGCATTTCAAG 59.087 30.769 12.95 0.00 38.76 3.02
1626 1667 6.230849 TGATTTTGCATTGCATTTCAAGTC 57.769 33.333 12.95 10.21 38.76 3.01
1628 1669 1.700523 TGCATTGCATTTCAAGTCGC 58.299 45.000 7.38 0.00 38.22 5.19
1649 1690 0.162507 CGCTCACACGCTTCTTCTTG 59.837 55.000 0.00 0.00 0.00 3.02
1799 1846 2.355513 GCAAGAGATGAAGCCCTCTGAA 60.356 50.000 0.00 0.00 39.49 3.02
1828 1880 4.769345 TCCATTGTACTCATATGCCACA 57.231 40.909 0.00 0.00 0.00 4.17
1830 1882 3.565482 CCATTGTACTCATATGCCACACC 59.435 47.826 0.00 0.00 0.00 4.16
1840 1892 1.768684 ATGCCACACCACTTCCGTCT 61.769 55.000 0.00 0.00 0.00 4.18
1843 1895 1.338769 GCCACACCACTTCCGTCTATT 60.339 52.381 0.00 0.00 0.00 1.73
1848 1900 3.387050 ACACCACTTCCGTCTATTATCCC 59.613 47.826 0.00 0.00 0.00 3.85
1858 1910 5.427481 TCCGTCTATTATCCCTCCAACTTTT 59.573 40.000 0.00 0.00 0.00 2.27
1894 1946 6.112734 GGTTCACTCATGTCACCATATTGTA 58.887 40.000 0.00 0.00 33.05 2.41
2126 3603 6.262207 AGGGCTCTTTTAGAGGTTAGTCTAA 58.738 40.000 5.90 0.00 42.54 2.10
2127 3604 6.154877 AGGGCTCTTTTAGAGGTTAGTCTAAC 59.845 42.308 13.49 13.49 42.54 2.34
2128 3605 6.154877 GGGCTCTTTTAGAGGTTAGTCTAACT 59.845 42.308 19.70 8.18 42.54 2.24
2129 3606 7.341512 GGGCTCTTTTAGAGGTTAGTCTAACTA 59.658 40.741 19.70 4.77 42.54 2.24
2130 3607 8.190122 GGCTCTTTTAGAGGTTAGTCTAACTAC 58.810 40.741 19.70 14.20 42.54 2.73
2132 3609 9.240734 CTCTTTTAGAGGTTAGTCTAACTACCA 57.759 37.037 19.70 3.98 38.49 3.25
2133 3610 9.765295 TCTTTTAGAGGTTAGTCTAACTACCAT 57.235 33.333 19.70 7.05 38.49 3.55
2174 3652 3.121030 CTTTCACGGCCCGCTGAG 61.121 66.667 1.23 0.00 0.00 3.35
2221 3699 1.734707 CGTCGAGCCCGAGTAAATTGT 60.735 52.381 0.00 0.00 46.52 2.71
2234 3712 7.067737 CCCGAGTAAATTGTATAAAACCACCAT 59.932 37.037 0.00 0.00 0.00 3.55
2340 3818 1.064758 ACTGATTGGCGGATTTGGCTA 60.065 47.619 0.00 0.00 35.06 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.763192 GCTAGGCTGGGAGGACCTTAT 60.763 57.143 0.00 0.00 41.11 1.73
1 2 0.398664 GCTAGGCTGGGAGGACCTTA 60.399 60.000 0.00 0.00 41.11 2.69
2 3 1.690985 GCTAGGCTGGGAGGACCTT 60.691 63.158 0.00 0.00 41.11 3.50
4 5 3.164977 GGCTAGGCTGGGAGGACC 61.165 72.222 9.46 0.00 40.81 4.46
5 6 2.041405 AGGCTAGGCTGGGAGGAC 60.041 66.667 19.53 0.00 0.00 3.85
7 8 2.846754 GGAGGCTAGGCTGGGAGG 60.847 72.222 25.50 0.00 0.00 4.30
9 10 1.460305 GATGGAGGCTAGGCTGGGA 60.460 63.158 25.50 7.26 0.00 4.37
10 11 2.876945 CGATGGAGGCTAGGCTGGG 61.877 68.421 25.50 3.99 0.00 4.45
12 13 1.814772 CTCCGATGGAGGCTAGGCTG 61.815 65.000 25.50 8.62 45.43 4.85
13 14 1.532794 CTCCGATGGAGGCTAGGCT 60.533 63.158 20.36 20.36 45.43 4.58
14 15 3.055580 CTCCGATGGAGGCTAGGC 58.944 66.667 8.55 8.55 45.43 3.93
22 23 3.031013 TGCTAGAAACATCTCCGATGGA 58.969 45.455 8.53 0.00 0.00 3.41
23 24 3.459232 TGCTAGAAACATCTCCGATGG 57.541 47.619 8.53 0.00 0.00 3.51
24 25 3.672397 CGATGCTAGAAACATCTCCGATG 59.328 47.826 0.00 2.49 41.45 3.84
25 26 3.319405 ACGATGCTAGAAACATCTCCGAT 59.681 43.478 0.00 0.00 41.45 4.18
26 27 2.688446 ACGATGCTAGAAACATCTCCGA 59.312 45.455 0.00 0.00 41.45 4.55
27 28 3.046390 GACGATGCTAGAAACATCTCCG 58.954 50.000 0.00 0.00 41.45 4.63
28 29 3.046390 CGACGATGCTAGAAACATCTCC 58.954 50.000 0.00 0.00 41.45 3.71
29 30 3.046390 CCGACGATGCTAGAAACATCTC 58.954 50.000 0.00 0.00 41.45 2.75
30 31 2.688446 TCCGACGATGCTAGAAACATCT 59.312 45.455 0.00 0.00 41.45 2.90
31 32 3.046390 CTCCGACGATGCTAGAAACATC 58.954 50.000 0.00 0.00 40.45 3.06
32 33 2.223829 CCTCCGACGATGCTAGAAACAT 60.224 50.000 0.00 0.00 0.00 2.71
33 34 1.134367 CCTCCGACGATGCTAGAAACA 59.866 52.381 0.00 0.00 0.00 2.83
34 35 1.536284 CCCTCCGACGATGCTAGAAAC 60.536 57.143 0.00 0.00 0.00 2.78
35 36 0.744874 CCCTCCGACGATGCTAGAAA 59.255 55.000 0.00 0.00 0.00 2.52
36 37 1.735376 GCCCTCCGACGATGCTAGAA 61.735 60.000 0.00 0.00 0.00 2.10
37 38 2.194212 GCCCTCCGACGATGCTAGA 61.194 63.158 0.00 0.00 0.00 2.43
38 39 2.336809 GCCCTCCGACGATGCTAG 59.663 66.667 0.00 0.00 0.00 3.42
39 40 3.592814 CGCCCTCCGACGATGCTA 61.593 66.667 0.00 0.00 40.02 3.49
46 47 4.803426 CTCTGCACGCCCTCCGAC 62.803 72.222 0.00 0.00 41.02 4.79
49 50 4.767255 CACCTCTGCACGCCCTCC 62.767 72.222 0.00 0.00 0.00 4.30
50 51 3.941657 GACACCTCTGCACGCCCTC 62.942 68.421 0.00 0.00 0.00 4.30
51 52 4.008933 GACACCTCTGCACGCCCT 62.009 66.667 0.00 0.00 0.00 5.19
52 53 4.008933 AGACACCTCTGCACGCCC 62.009 66.667 0.00 0.00 0.00 6.13
53 54 2.740055 CAGACACCTCTGCACGCC 60.740 66.667 0.00 0.00 37.72 5.68
59 60 6.610395 ATCTGCCAAAGACAGACACCTCTG 62.610 50.000 0.00 0.00 46.38 3.35
60 61 1.071385 CTGCCAAAGACAGACACCTCT 59.929 52.381 0.00 0.00 37.32 3.69
61 62 1.070758 TCTGCCAAAGACAGACACCTC 59.929 52.381 0.00 0.00 39.21 3.85
62 63 1.131638 TCTGCCAAAGACAGACACCT 58.868 50.000 0.00 0.00 39.21 4.00
63 64 2.079925 GATCTGCCAAAGACAGACACC 58.920 52.381 0.00 0.00 46.38 4.16
64 65 2.999355 GAGATCTGCCAAAGACAGACAC 59.001 50.000 0.00 0.00 46.38 3.67
65 66 2.353109 CGAGATCTGCCAAAGACAGACA 60.353 50.000 0.00 0.00 46.38 3.41
66 67 2.266554 CGAGATCTGCCAAAGACAGAC 58.733 52.381 0.00 0.00 46.38 3.51
68 69 1.998315 CACGAGATCTGCCAAAGACAG 59.002 52.381 0.00 0.00 37.88 3.51
69 70 1.344438 ACACGAGATCTGCCAAAGACA 59.656 47.619 0.00 0.00 37.88 3.41
70 71 1.728971 CACACGAGATCTGCCAAAGAC 59.271 52.381 0.00 0.00 37.88 3.01
71 72 1.618343 TCACACGAGATCTGCCAAAGA 59.382 47.619 0.00 0.00 39.94 2.52
72 73 2.084610 TCACACGAGATCTGCCAAAG 57.915 50.000 0.00 0.00 0.00 2.77
73 74 2.621338 GATCACACGAGATCTGCCAAA 58.379 47.619 0.00 0.00 40.93 3.28
74 75 2.299993 GATCACACGAGATCTGCCAA 57.700 50.000 0.00 0.00 40.93 4.52
80 81 2.920227 GCCGATCAGATCACACGAGATC 60.920 54.545 11.12 8.50 43.73 2.75
81 82 1.000827 GCCGATCAGATCACACGAGAT 60.001 52.381 11.12 0.00 0.00 2.75
82 83 0.382158 GCCGATCAGATCACACGAGA 59.618 55.000 11.12 0.00 0.00 4.04
83 84 0.101219 TGCCGATCAGATCACACGAG 59.899 55.000 11.12 0.00 0.00 4.18
84 85 0.746659 ATGCCGATCAGATCACACGA 59.253 50.000 11.12 0.00 0.00 4.35
85 86 1.575244 AATGCCGATCAGATCACACG 58.425 50.000 11.12 0.00 0.00 4.49
86 87 2.679837 ACAAATGCCGATCAGATCACAC 59.320 45.455 11.12 0.00 0.00 3.82
87 88 2.938451 GACAAATGCCGATCAGATCACA 59.062 45.455 11.12 8.22 0.00 3.58
88 89 3.201290 AGACAAATGCCGATCAGATCAC 58.799 45.455 11.12 2.61 0.00 3.06
89 90 3.548745 AGACAAATGCCGATCAGATCA 57.451 42.857 11.12 0.00 0.00 2.92
90 91 3.060003 CGAAGACAAATGCCGATCAGATC 60.060 47.826 0.00 0.00 0.00 2.75
91 92 2.868583 CGAAGACAAATGCCGATCAGAT 59.131 45.455 0.00 0.00 0.00 2.90
92 93 2.270923 CGAAGACAAATGCCGATCAGA 58.729 47.619 0.00 0.00 0.00 3.27
93 94 1.328680 CCGAAGACAAATGCCGATCAG 59.671 52.381 0.00 0.00 0.00 2.90
94 95 1.338674 ACCGAAGACAAATGCCGATCA 60.339 47.619 0.00 0.00 0.00 2.92
95 96 1.062587 CACCGAAGACAAATGCCGATC 59.937 52.381 0.00 0.00 0.00 3.69
96 97 1.086696 CACCGAAGACAAATGCCGAT 58.913 50.000 0.00 0.00 0.00 4.18
97 98 0.953471 CCACCGAAGACAAATGCCGA 60.953 55.000 0.00 0.00 0.00 5.54
98 99 0.953471 TCCACCGAAGACAAATGCCG 60.953 55.000 0.00 0.00 0.00 5.69
99 100 1.463674 ATCCACCGAAGACAAATGCC 58.536 50.000 0.00 0.00 0.00 4.40
100 101 2.487762 TGAATCCACCGAAGACAAATGC 59.512 45.455 0.00 0.00 0.00 3.56
101 102 3.753272 ACTGAATCCACCGAAGACAAATG 59.247 43.478 0.00 0.00 0.00 2.32
102 103 4.003648 GACTGAATCCACCGAAGACAAAT 58.996 43.478 0.00 0.00 0.00 2.32
103 104 3.071023 AGACTGAATCCACCGAAGACAAA 59.929 43.478 0.00 0.00 0.00 2.83
104 105 2.632996 AGACTGAATCCACCGAAGACAA 59.367 45.455 0.00 0.00 0.00 3.18
105 106 2.248248 AGACTGAATCCACCGAAGACA 58.752 47.619 0.00 0.00 0.00 3.41
106 107 3.254892 GAAGACTGAATCCACCGAAGAC 58.745 50.000 0.00 0.00 0.00 3.01
107 108 2.094700 CGAAGACTGAATCCACCGAAGA 60.095 50.000 0.00 0.00 0.00 2.87
108 109 2.263077 CGAAGACTGAATCCACCGAAG 58.737 52.381 0.00 0.00 0.00 3.79
109 110 1.616865 ACGAAGACTGAATCCACCGAA 59.383 47.619 0.00 0.00 0.00 4.30
110 111 1.254026 ACGAAGACTGAATCCACCGA 58.746 50.000 0.00 0.00 0.00 4.69
111 112 1.726791 CAACGAAGACTGAATCCACCG 59.273 52.381 0.00 0.00 0.00 4.94
112 113 2.076863 CCAACGAAGACTGAATCCACC 58.923 52.381 0.00 0.00 0.00 4.61
113 114 2.737252 GACCAACGAAGACTGAATCCAC 59.263 50.000 0.00 0.00 0.00 4.02
114 115 2.632996 AGACCAACGAAGACTGAATCCA 59.367 45.455 0.00 0.00 0.00 3.41
115 116 3.320673 AGACCAACGAAGACTGAATCC 57.679 47.619 0.00 0.00 0.00 3.01
116 117 3.852536 CGTAGACCAACGAAGACTGAATC 59.147 47.826 0.00 0.00 45.68 2.52
117 118 3.834610 CGTAGACCAACGAAGACTGAAT 58.165 45.455 0.00 0.00 45.68 2.57
118 119 2.606308 GCGTAGACCAACGAAGACTGAA 60.606 50.000 0.00 0.00 45.68 3.02
119 120 1.068748 GCGTAGACCAACGAAGACTGA 60.069 52.381 0.00 0.00 45.68 3.41
120 121 1.068472 AGCGTAGACCAACGAAGACTG 60.068 52.381 0.00 0.00 45.68 3.51
121 122 1.245732 AGCGTAGACCAACGAAGACT 58.754 50.000 0.00 0.00 45.68 3.24
122 123 2.061740 AAGCGTAGACCAACGAAGAC 57.938 50.000 0.00 0.00 45.68 3.01
123 124 5.066893 ACATATAAGCGTAGACCAACGAAGA 59.933 40.000 0.00 0.00 45.68 2.87
124 125 5.279384 ACATATAAGCGTAGACCAACGAAG 58.721 41.667 0.00 0.00 45.68 3.79
125 126 5.066893 AGACATATAAGCGTAGACCAACGAA 59.933 40.000 0.00 0.00 45.68 3.85
126 127 4.577693 AGACATATAAGCGTAGACCAACGA 59.422 41.667 0.00 0.00 45.68 3.85
127 128 4.675565 CAGACATATAAGCGTAGACCAACG 59.324 45.833 0.00 0.00 45.58 4.10
128 129 4.444720 GCAGACATATAAGCGTAGACCAAC 59.555 45.833 0.00 0.00 0.00 3.77
129 130 4.098807 TGCAGACATATAAGCGTAGACCAA 59.901 41.667 0.00 0.00 0.00 3.67
130 131 3.634910 TGCAGACATATAAGCGTAGACCA 59.365 43.478 0.00 0.00 0.00 4.02
131 132 4.230657 CTGCAGACATATAAGCGTAGACC 58.769 47.826 8.42 0.00 0.00 3.85
132 133 4.230657 CCTGCAGACATATAAGCGTAGAC 58.769 47.826 17.39 0.00 0.00 2.59
133 134 3.889538 ACCTGCAGACATATAAGCGTAGA 59.110 43.478 17.39 0.00 0.00 2.59
134 135 4.244425 ACCTGCAGACATATAAGCGTAG 57.756 45.455 17.39 0.00 0.00 3.51
135 136 4.368315 CAACCTGCAGACATATAAGCGTA 58.632 43.478 17.39 0.00 0.00 4.42
136 137 3.198068 CAACCTGCAGACATATAAGCGT 58.802 45.455 17.39 0.00 0.00 5.07
137 138 2.545526 CCAACCTGCAGACATATAAGCG 59.454 50.000 17.39 0.00 0.00 4.68
138 139 3.808728 TCCAACCTGCAGACATATAAGC 58.191 45.455 17.39 0.00 0.00 3.09
139 140 4.999950 GGATCCAACCTGCAGACATATAAG 59.000 45.833 17.39 0.00 0.00 1.73
140 141 4.660303 AGGATCCAACCTGCAGACATATAA 59.340 41.667 17.39 0.00 39.01 0.98
141 142 4.234550 AGGATCCAACCTGCAGACATATA 58.765 43.478 17.39 0.00 39.01 0.86
142 143 3.051581 AGGATCCAACCTGCAGACATAT 58.948 45.455 17.39 1.57 39.01 1.78
143 144 2.481441 AGGATCCAACCTGCAGACATA 58.519 47.619 17.39 0.00 39.01 2.29
144 145 1.293062 AGGATCCAACCTGCAGACAT 58.707 50.000 17.39 0.00 39.01 3.06
145 146 1.003580 GAAGGATCCAACCTGCAGACA 59.996 52.381 17.39 0.00 40.49 3.41
146 147 1.680249 GGAAGGATCCAACCTGCAGAC 60.680 57.143 17.39 0.00 45.79 3.51
147 148 0.620556 GGAAGGATCCAACCTGCAGA 59.379 55.000 17.39 0.00 45.79 4.26
148 149 0.745845 CGGAAGGATCCAACCTGCAG 60.746 60.000 15.82 6.78 46.97 4.41
149 150 1.198094 TCGGAAGGATCCAACCTGCA 61.198 55.000 15.82 1.01 46.97 4.41
150 151 0.181350 ATCGGAAGGATCCAACCTGC 59.819 55.000 15.82 0.00 46.97 4.85
151 152 2.246719 GATCGGAAGGATCCAACCTG 57.753 55.000 15.82 12.25 46.97 4.00
156 157 9.498857 AAGAGAAGTCTAGATCGGAAGGATCCA 62.499 44.444 15.82 0.00 41.65 3.41
157 158 7.194994 AAGAGAAGTCTAGATCGGAAGGATCC 61.195 46.154 2.48 2.48 41.65 3.36
158 159 5.768164 AAGAGAAGTCTAGATCGGAAGGATC 59.232 44.000 0.00 0.00 41.31 3.36
159 160 5.319043 AGAGAAGTCTAGATCGGAAGGAT 57.681 43.478 0.00 0.00 38.35 3.24
160 161 4.781775 AGAGAAGTCTAGATCGGAAGGA 57.218 45.455 0.00 0.00 0.00 3.36
161 162 4.884744 TGAAGAGAAGTCTAGATCGGAAGG 59.115 45.833 0.00 0.00 30.45 3.46
162 163 6.565811 CGATGAAGAGAAGTCTAGATCGGAAG 60.566 46.154 0.00 0.00 38.86 3.46
163 164 5.237561 CGATGAAGAGAAGTCTAGATCGGAA 59.762 44.000 0.00 0.00 38.86 4.30
164 165 4.752604 CGATGAAGAGAAGTCTAGATCGGA 59.247 45.833 0.00 0.00 38.86 4.55
165 166 4.083537 CCGATGAAGAGAAGTCTAGATCGG 60.084 50.000 15.34 15.34 46.97 4.18
166 167 4.513692 ACCGATGAAGAGAAGTCTAGATCG 59.486 45.833 0.00 0.00 40.52 3.69
167 168 5.278266 CCACCGATGAAGAGAAGTCTAGATC 60.278 48.000 0.00 0.00 30.45 2.75
168 169 4.582656 CCACCGATGAAGAGAAGTCTAGAT 59.417 45.833 0.00 0.00 30.45 1.98
169 170 3.948473 CCACCGATGAAGAGAAGTCTAGA 59.052 47.826 0.00 0.00 30.45 2.43
170 171 3.490078 GCCACCGATGAAGAGAAGTCTAG 60.490 52.174 0.00 0.00 30.45 2.43
171 172 2.427453 GCCACCGATGAAGAGAAGTCTA 59.573 50.000 0.00 0.00 30.45 2.59
172 173 1.205893 GCCACCGATGAAGAGAAGTCT 59.794 52.381 0.00 0.00 32.81 3.24
173 174 1.646189 GCCACCGATGAAGAGAAGTC 58.354 55.000 0.00 0.00 0.00 3.01
174 175 0.108615 CGCCACCGATGAAGAGAAGT 60.109 55.000 0.00 0.00 36.29 3.01
175 176 0.807667 CCGCCACCGATGAAGAGAAG 60.808 60.000 0.00 0.00 36.29 2.85
176 177 1.218047 CCGCCACCGATGAAGAGAA 59.782 57.895 0.00 0.00 36.29 2.87
177 178 1.541310 AACCGCCACCGATGAAGAGA 61.541 55.000 0.00 0.00 36.29 3.10
178 179 1.079127 AACCGCCACCGATGAAGAG 60.079 57.895 0.00 0.00 36.29 2.85
179 180 1.375396 CAACCGCCACCGATGAAGA 60.375 57.895 0.00 0.00 36.29 2.87
180 181 3.039202 GCAACCGCCACCGATGAAG 62.039 63.158 0.00 0.00 36.29 3.02
181 182 3.053291 GCAACCGCCACCGATGAA 61.053 61.111 0.00 0.00 36.29 2.57
182 183 4.015406 AGCAACCGCCACCGATGA 62.015 61.111 0.00 0.00 39.83 2.92
183 184 3.803082 CAGCAACCGCCACCGATG 61.803 66.667 0.00 0.00 39.83 3.84
184 185 3.842925 AACAGCAACCGCCACCGAT 62.843 57.895 0.00 0.00 39.83 4.18
185 186 4.555709 AACAGCAACCGCCACCGA 62.556 61.111 0.00 0.00 39.83 4.69
186 187 4.025401 GAACAGCAACCGCCACCG 62.025 66.667 0.00 0.00 39.83 4.94
187 188 2.594592 AGAACAGCAACCGCCACC 60.595 61.111 0.00 0.00 39.83 4.61
188 189 2.639286 CAGAACAGCAACCGCCAC 59.361 61.111 0.00 0.00 39.83 5.01
189 190 2.594303 CCAGAACAGCAACCGCCA 60.594 61.111 0.00 0.00 39.83 5.69
190 191 2.594592 ACCAGAACAGCAACCGCC 60.595 61.111 0.00 0.00 39.83 6.13
191 192 2.639286 CACCAGAACAGCAACCGC 59.361 61.111 0.00 0.00 38.99 5.68
192 193 1.227823 TCCACCAGAACAGCAACCG 60.228 57.895 0.00 0.00 0.00 4.44
193 194 0.179018 AGTCCACCAGAACAGCAACC 60.179 55.000 0.00 0.00 0.00 3.77
194 195 0.947244 CAGTCCACCAGAACAGCAAC 59.053 55.000 0.00 0.00 0.00 4.17
195 196 0.819259 GCAGTCCACCAGAACAGCAA 60.819 55.000 0.00 0.00 0.00 3.91
196 197 1.227943 GCAGTCCACCAGAACAGCA 60.228 57.895 0.00 0.00 0.00 4.41
197 198 1.968540 GGCAGTCCACCAGAACAGC 60.969 63.158 0.00 0.00 0.00 4.40
198 199 0.976641 TAGGCAGTCCACCAGAACAG 59.023 55.000 0.00 0.00 33.74 3.16
199 200 0.685097 GTAGGCAGTCCACCAGAACA 59.315 55.000 0.00 0.00 33.74 3.18
200 201 0.977395 AGTAGGCAGTCCACCAGAAC 59.023 55.000 0.00 0.00 33.74 3.01
201 202 2.176889 GTAGTAGGCAGTCCACCAGAA 58.823 52.381 0.00 0.00 33.74 3.02
202 203 1.076513 TGTAGTAGGCAGTCCACCAGA 59.923 52.381 0.00 0.00 33.74 3.86
203 204 1.557099 TGTAGTAGGCAGTCCACCAG 58.443 55.000 0.00 0.00 33.74 4.00
204 205 1.621814 GTTGTAGTAGGCAGTCCACCA 59.378 52.381 0.00 0.00 33.74 4.17
205 206 1.621814 TGTTGTAGTAGGCAGTCCACC 59.378 52.381 0.00 0.00 33.74 4.61
206 207 3.396260 TTGTTGTAGTAGGCAGTCCAC 57.604 47.619 0.00 0.00 33.74 4.02
207 208 3.326588 ACATTGTTGTAGTAGGCAGTCCA 59.673 43.478 0.00 0.00 33.16 4.02
208 209 3.939066 ACATTGTTGTAGTAGGCAGTCC 58.061 45.455 0.00 0.00 33.16 3.85
209 210 5.106673 GGAAACATTGTTGTAGTAGGCAGTC 60.107 44.000 2.13 0.00 34.06 3.51
210 211 4.760204 GGAAACATTGTTGTAGTAGGCAGT 59.240 41.667 2.13 0.00 34.06 4.40
211 212 5.003804 AGGAAACATTGTTGTAGTAGGCAG 58.996 41.667 2.13 0.00 34.06 4.85
212 213 4.759693 CAGGAAACATTGTTGTAGTAGGCA 59.240 41.667 2.13 0.00 34.06 4.75
213 214 5.001232 TCAGGAAACATTGTTGTAGTAGGC 58.999 41.667 2.13 0.00 34.06 3.93
214 215 5.120208 CGTCAGGAAACATTGTTGTAGTAGG 59.880 44.000 2.13 0.00 34.06 3.18
215 216 5.120208 CCGTCAGGAAACATTGTTGTAGTAG 59.880 44.000 2.13 0.00 41.02 2.57
216 217 4.992319 CCGTCAGGAAACATTGTTGTAGTA 59.008 41.667 2.13 0.00 41.02 1.82
217 218 3.813166 CCGTCAGGAAACATTGTTGTAGT 59.187 43.478 2.13 0.00 41.02 2.73
218 219 4.062293 TCCGTCAGGAAACATTGTTGTAG 58.938 43.478 2.13 0.00 45.12 2.74
219 220 4.074627 TCCGTCAGGAAACATTGTTGTA 57.925 40.909 2.13 0.00 45.12 2.41
220 221 2.925724 TCCGTCAGGAAACATTGTTGT 58.074 42.857 2.13 0.00 45.12 3.32
232 233 1.753078 TCATCGTCCCTCCGTCAGG 60.753 63.158 0.00 0.00 43.01 3.86
233 234 1.433879 GTCATCGTCCCTCCGTCAG 59.566 63.158 0.00 0.00 0.00 3.51
234 235 2.404186 CGTCATCGTCCCTCCGTCA 61.404 63.158 0.00 0.00 0.00 4.35
235 236 2.110967 TCGTCATCGTCCCTCCGTC 61.111 63.158 0.00 0.00 38.33 4.79
236 237 2.045634 TCGTCATCGTCCCTCCGT 60.046 61.111 0.00 0.00 38.33 4.69
237 238 2.408022 GTCGTCATCGTCCCTCCG 59.592 66.667 0.00 0.00 38.33 4.63
238 239 2.408022 CGTCGTCATCGTCCCTCC 59.592 66.667 0.00 0.00 38.33 4.30
239 240 2.408022 CCGTCGTCATCGTCCCTC 59.592 66.667 0.00 0.00 38.33 4.30
240 241 3.823330 GCCGTCGTCATCGTCCCT 61.823 66.667 0.00 0.00 38.33 4.20
262 263 2.684843 GCACTGGAGCAAGCCGAAG 61.685 63.158 0.00 0.00 0.00 3.79
263 264 2.669569 GCACTGGAGCAAGCCGAA 60.670 61.111 0.00 0.00 0.00 4.30
264 265 3.182590 AAGCACTGGAGCAAGCCGA 62.183 57.895 0.00 0.00 36.85 5.54
265 266 2.670934 AAGCACTGGAGCAAGCCG 60.671 61.111 0.00 0.00 36.85 5.52
266 267 1.458639 AACAAGCACTGGAGCAAGCC 61.459 55.000 0.00 0.00 36.85 4.35
267 268 0.318445 CAACAAGCACTGGAGCAAGC 60.318 55.000 0.00 0.00 36.85 4.01
268 269 1.002033 GACAACAAGCACTGGAGCAAG 60.002 52.381 0.00 0.00 36.85 4.01
269 270 1.024271 GACAACAAGCACTGGAGCAA 58.976 50.000 0.00 0.00 36.85 3.91
270 271 1.159713 CGACAACAAGCACTGGAGCA 61.160 55.000 0.00 0.00 36.85 4.26
271 272 1.160329 ACGACAACAAGCACTGGAGC 61.160 55.000 0.00 0.00 0.00 4.70
272 273 0.861837 GACGACAACAAGCACTGGAG 59.138 55.000 0.00 0.00 0.00 3.86
273 274 0.464036 AGACGACAACAAGCACTGGA 59.536 50.000 0.00 0.00 0.00 3.86
274 275 0.861837 GAGACGACAACAAGCACTGG 59.138 55.000 0.00 0.00 0.00 4.00
275 276 1.858091 AGAGACGACAACAAGCACTG 58.142 50.000 0.00 0.00 0.00 3.66
276 277 2.029828 CCTAGAGACGACAACAAGCACT 60.030 50.000 0.00 0.00 0.00 4.40
277 278 2.288273 ACCTAGAGACGACAACAAGCAC 60.288 50.000 0.00 0.00 0.00 4.40
278 279 1.961394 ACCTAGAGACGACAACAAGCA 59.039 47.619 0.00 0.00 0.00 3.91
279 280 2.726832 ACCTAGAGACGACAACAAGC 57.273 50.000 0.00 0.00 0.00 4.01
280 281 4.696402 AGACTACCTAGAGACGACAACAAG 59.304 45.833 0.00 0.00 0.00 3.16
281 282 4.649692 AGACTACCTAGAGACGACAACAA 58.350 43.478 0.00 0.00 0.00 2.83
282 283 4.283363 AGACTACCTAGAGACGACAACA 57.717 45.455 0.00 0.00 0.00 3.33
283 284 5.174395 TGTAGACTACCTAGAGACGACAAC 58.826 45.833 10.14 0.00 0.00 3.32
284 285 5.411831 TGTAGACTACCTAGAGACGACAA 57.588 43.478 10.14 0.00 0.00 3.18
285 286 5.411831 TTGTAGACTACCTAGAGACGACA 57.588 43.478 10.14 0.00 0.00 4.35
286 287 5.064579 GGTTTGTAGACTACCTAGAGACGAC 59.935 48.000 10.14 0.00 29.70 4.34
287 288 5.046014 AGGTTTGTAGACTACCTAGAGACGA 60.046 44.000 10.14 0.00 40.42 4.20
288 289 5.064962 CAGGTTTGTAGACTACCTAGAGACG 59.935 48.000 10.14 0.00 40.24 4.18
289 290 6.179040 TCAGGTTTGTAGACTACCTAGAGAC 58.821 44.000 10.14 0.00 40.24 3.36
290 291 6.384342 TCAGGTTTGTAGACTACCTAGAGA 57.616 41.667 10.14 0.00 40.24 3.10
291 292 7.122948 ACATTCAGGTTTGTAGACTACCTAGAG 59.877 40.741 10.14 0.00 40.24 2.43
292 293 6.952358 ACATTCAGGTTTGTAGACTACCTAGA 59.048 38.462 10.14 1.31 40.24 2.43
293 294 7.171630 ACATTCAGGTTTGTAGACTACCTAG 57.828 40.000 10.14 0.00 40.24 3.02
294 295 8.654485 TTACATTCAGGTTTGTAGACTACCTA 57.346 34.615 10.14 0.00 40.24 3.08
295 296 7.549147 TTACATTCAGGTTTGTAGACTACCT 57.451 36.000 10.14 0.00 42.92 3.08
296 297 8.788325 AATTACATTCAGGTTTGTAGACTACC 57.212 34.615 10.14 0.00 30.53 3.18
323 324 6.284459 AGAATTACATTTTCACCCGCAAAAA 58.716 32.000 0.00 0.00 0.00 1.94
324 325 5.848406 AGAATTACATTTTCACCCGCAAAA 58.152 33.333 0.00 0.00 0.00 2.44
325 326 5.461032 AGAATTACATTTTCACCCGCAAA 57.539 34.783 0.00 0.00 0.00 3.68
326 327 5.461032 AAGAATTACATTTTCACCCGCAA 57.539 34.783 0.00 0.00 0.00 4.85
341 342 8.974060 ACAAAGAACACCAGAAGTAAGAATTA 57.026 30.769 0.00 0.00 0.00 1.40
342 343 7.881775 ACAAAGAACACCAGAAGTAAGAATT 57.118 32.000 0.00 0.00 0.00 2.17
343 344 8.211629 AGTACAAAGAACACCAGAAGTAAGAAT 58.788 33.333 0.00 0.00 0.00 2.40
344 345 7.562135 AGTACAAAGAACACCAGAAGTAAGAA 58.438 34.615 0.00 0.00 0.00 2.52
345 346 7.120923 AGTACAAAGAACACCAGAAGTAAGA 57.879 36.000 0.00 0.00 0.00 2.10
346 347 7.384387 GGTAGTACAAAGAACACCAGAAGTAAG 59.616 40.741 2.06 0.00 0.00 2.34
347 348 7.070322 AGGTAGTACAAAGAACACCAGAAGTAA 59.930 37.037 2.06 0.00 0.00 2.24
348 349 6.552350 AGGTAGTACAAAGAACACCAGAAGTA 59.448 38.462 2.06 0.00 0.00 2.24
349 350 5.365895 AGGTAGTACAAAGAACACCAGAAGT 59.634 40.000 2.06 0.00 0.00 3.01
350 351 5.855045 AGGTAGTACAAAGAACACCAGAAG 58.145 41.667 2.06 0.00 0.00 2.85
351 352 5.881923 AGGTAGTACAAAGAACACCAGAA 57.118 39.130 2.06 0.00 0.00 3.02
352 353 5.364446 TCAAGGTAGTACAAAGAACACCAGA 59.636 40.000 2.06 0.00 0.00 3.86
353 354 5.607477 TCAAGGTAGTACAAAGAACACCAG 58.393 41.667 2.06 0.00 0.00 4.00
354 355 5.617528 TCAAGGTAGTACAAAGAACACCA 57.382 39.130 2.06 0.00 0.00 4.17
355 356 8.788325 AATATCAAGGTAGTACAAAGAACACC 57.212 34.615 2.06 0.00 0.00 4.16
381 382 9.744468 TCGAGAAAACTTTCGATATATTCATCA 57.256 29.630 0.00 0.00 40.55 3.07
414 415 8.523658 CCGGAAGTAGATGATGATGTAGATTTA 58.476 37.037 0.00 0.00 0.00 1.40
415 416 7.382110 CCGGAAGTAGATGATGATGTAGATTT 58.618 38.462 0.00 0.00 0.00 2.17
416 417 6.071108 CCCGGAAGTAGATGATGATGTAGATT 60.071 42.308 0.73 0.00 0.00 2.40
417 418 5.420421 CCCGGAAGTAGATGATGATGTAGAT 59.580 44.000 0.73 0.00 0.00 1.98
418 419 4.767409 CCCGGAAGTAGATGATGATGTAGA 59.233 45.833 0.73 0.00 0.00 2.59
419 420 4.619394 GCCCGGAAGTAGATGATGATGTAG 60.619 50.000 0.73 0.00 0.00 2.74
420 421 3.258372 GCCCGGAAGTAGATGATGATGTA 59.742 47.826 0.73 0.00 0.00 2.29
421 422 2.037772 GCCCGGAAGTAGATGATGATGT 59.962 50.000 0.73 0.00 0.00 3.06
422 423 2.037641 TGCCCGGAAGTAGATGATGATG 59.962 50.000 0.73 0.00 0.00 3.07
423 424 2.329267 TGCCCGGAAGTAGATGATGAT 58.671 47.619 0.73 0.00 0.00 2.45
424 425 1.788229 TGCCCGGAAGTAGATGATGA 58.212 50.000 0.73 0.00 0.00 2.92
425 426 2.620251 TTGCCCGGAAGTAGATGATG 57.380 50.000 0.73 0.00 0.00 3.07
426 427 2.158755 CCTTTGCCCGGAAGTAGATGAT 60.159 50.000 0.73 0.00 0.00 2.45
427 428 1.209504 CCTTTGCCCGGAAGTAGATGA 59.790 52.381 0.73 0.00 0.00 2.92
428 429 1.209504 TCCTTTGCCCGGAAGTAGATG 59.790 52.381 0.73 0.00 0.00 2.90
429 430 1.209747 GTCCTTTGCCCGGAAGTAGAT 59.790 52.381 0.73 0.00 31.13 1.98
430 431 0.611714 GTCCTTTGCCCGGAAGTAGA 59.388 55.000 0.73 0.00 31.13 2.59
431 432 0.613777 AGTCCTTTGCCCGGAAGTAG 59.386 55.000 0.73 0.00 31.13 2.57
432 433 0.611714 GAGTCCTTTGCCCGGAAGTA 59.388 55.000 0.73 0.00 31.13 2.24
433 434 1.375326 GAGTCCTTTGCCCGGAAGT 59.625 57.895 0.73 0.00 31.13 3.01
434 435 1.377333 GGAGTCCTTTGCCCGGAAG 60.377 63.158 0.73 0.00 31.13 3.46
435 436 2.754375 GGAGTCCTTTGCCCGGAA 59.246 61.111 0.73 0.00 31.13 4.30
436 437 3.702048 CGGAGTCCTTTGCCCGGA 61.702 66.667 0.73 0.00 38.42 5.14
442 443 1.602377 GTTTGTGTCCGGAGTCCTTTG 59.398 52.381 3.06 0.00 0.00 2.77
451 452 4.939368 TGGCCCGTTTGTGTCCGG 62.939 66.667 0.00 0.00 43.82 5.14
508 511 1.852280 GTCAAACCAAACAAAGCTCGC 59.148 47.619 0.00 0.00 0.00 5.03
518 521 7.766738 GGTTTAAAGAATCCAAGTCAAACCAAA 59.233 33.333 7.77 0.00 41.98 3.28
639 645 1.611519 CCACGGCAACTAAAGGGAAA 58.388 50.000 0.00 0.00 0.00 3.13
656 663 4.365514 TCAAGGAGAAAACTATGTGCCA 57.634 40.909 0.00 0.00 0.00 4.92
657 664 5.904362 ATTCAAGGAGAAAACTATGTGCC 57.096 39.130 0.00 0.00 40.22 5.01
712 719 1.275010 GTGGCGGATGGTTGGATTTTT 59.725 47.619 0.00 0.00 0.00 1.94
713 720 0.894835 GTGGCGGATGGTTGGATTTT 59.105 50.000 0.00 0.00 0.00 1.82
714 721 0.970427 GGTGGCGGATGGTTGGATTT 60.970 55.000 0.00 0.00 0.00 2.17
715 722 1.379843 GGTGGCGGATGGTTGGATT 60.380 57.895 0.00 0.00 0.00 3.01
716 723 2.270874 GAGGTGGCGGATGGTTGGAT 62.271 60.000 0.00 0.00 0.00 3.41
717 724 2.933287 AGGTGGCGGATGGTTGGA 60.933 61.111 0.00 0.00 0.00 3.53
718 725 2.438434 GAGGTGGCGGATGGTTGG 60.438 66.667 0.00 0.00 0.00 3.77
719 726 2.438434 GGAGGTGGCGGATGGTTG 60.438 66.667 0.00 0.00 0.00 3.77
922 931 0.874390 GCGAGCACTGAATGGTTTGA 59.126 50.000 0.00 0.00 39.82 2.69
924 933 1.868997 CGCGAGCACTGAATGGTTT 59.131 52.632 0.00 0.00 39.82 3.27
965 974 2.092375 CCTTCCTTCCTTCCCGCTTAAT 60.092 50.000 0.00 0.00 0.00 1.40
986 995 0.985490 AGACATGGCTTCCTCCCTCC 60.985 60.000 0.00 0.00 0.00 4.30
987 996 0.179936 CAGACATGGCTTCCTCCCTC 59.820 60.000 0.00 0.00 0.00 4.30
988 997 1.919600 GCAGACATGGCTTCCTCCCT 61.920 60.000 0.00 0.00 0.00 4.20
989 998 1.452833 GCAGACATGGCTTCCTCCC 60.453 63.158 0.00 0.00 0.00 4.30
1026 1035 0.459489 CCTCCTTCTCCTCGCTGAAG 59.541 60.000 0.00 0.00 39.32 3.02
1123 1132 8.710749 ACATATAAGAAATGGTAGGGTACGTA 57.289 34.615 0.00 0.00 0.00 3.57
1124 1133 7.607615 ACATATAAGAAATGGTAGGGTACGT 57.392 36.000 0.00 0.00 0.00 3.57
1125 1134 9.017509 TCTACATATAAGAAATGGTAGGGTACG 57.982 37.037 0.00 0.00 0.00 3.67
1144 1158 4.199310 GGGCTTCATTGTGCTTCTACATA 58.801 43.478 4.92 0.00 0.00 2.29
1200 1222 0.250234 TCAAAGATCCTGGAGGCACG 59.750 55.000 1.52 0.00 34.44 5.34
1232 1254 2.892425 GGGAACATCTGCCTCGCG 60.892 66.667 0.00 0.00 31.27 5.87
1280 1302 0.555769 TCTTGAGCTTGGGGTTGGTT 59.444 50.000 0.00 0.00 0.00 3.67
1359 1381 8.150296 CACATTGGTCAGTCATGGAGTAATATA 58.850 37.037 0.00 0.00 0.00 0.86
1360 1382 6.994496 CACATTGGTCAGTCATGGAGTAATAT 59.006 38.462 0.00 0.00 0.00 1.28
1361 1383 6.070251 ACACATTGGTCAGTCATGGAGTAATA 60.070 38.462 0.00 0.00 0.00 0.98
1362 1384 5.188434 CACATTGGTCAGTCATGGAGTAAT 58.812 41.667 0.00 0.00 0.00 1.89
1373 1411 5.643348 CACATACACATACACATTGGTCAGT 59.357 40.000 0.00 0.00 0.00 3.41
1385 1423 4.576053 ACACATGGATGCACATACACATAC 59.424 41.667 0.00 0.00 33.83 2.39
1386 1424 4.779696 ACACATGGATGCACATACACATA 58.220 39.130 0.00 0.00 33.83 2.29
1387 1425 3.623703 ACACATGGATGCACATACACAT 58.376 40.909 0.00 0.00 33.83 3.21
1388 1426 3.070476 ACACATGGATGCACATACACA 57.930 42.857 0.00 0.00 33.83 3.72
1389 1427 3.761657 CAACACATGGATGCACATACAC 58.238 45.455 0.00 0.00 33.83 2.90
1390 1428 2.164017 GCAACACATGGATGCACATACA 59.836 45.455 12.87 0.00 39.81 2.29
1503 1541 0.247145 CGCCGTATTTCAAGTGCGTC 60.247 55.000 0.00 0.00 37.44 5.19
1545 1583 1.094785 CTAATGGGGCAAGTGAACGG 58.905 55.000 0.00 0.00 0.00 4.44
1546 1584 0.451783 GCTAATGGGGCAAGTGAACG 59.548 55.000 0.00 0.00 0.00 3.95
1557 1595 2.643551 ACAATTCACGAGGCTAATGGG 58.356 47.619 0.00 0.00 0.00 4.00
1560 1598 6.288294 TGCTATAACAATTCACGAGGCTAAT 58.712 36.000 0.00 0.00 0.00 1.73
1562 1600 5.270893 TGCTATAACAATTCACGAGGCTA 57.729 39.130 0.00 0.00 0.00 3.93
1573 1611 5.065613 ACCCCATGTCATGCTATAACAAT 57.934 39.130 7.35 0.00 0.00 2.71
1591 1632 1.604438 GCAAAATCAAACACGGACCCC 60.604 52.381 0.00 0.00 0.00 4.95
1596 1637 2.543012 TGCAATGCAAAATCAAACACGG 59.457 40.909 5.01 0.00 34.76 4.94
1628 1669 2.357517 AAGAAGCGTGTGAGCGGG 60.358 61.111 0.00 0.00 43.00 6.13
1724 1771 1.874019 CCACGCGTTCCTCATCTCG 60.874 63.158 10.22 0.00 0.00 4.04
1799 1846 7.046652 GCATATGAGTACAATGGATGAGCTAT 58.953 38.462 6.97 0.00 0.00 2.97
1840 1892 5.420739 GGCAACAAAAGTTGGAGGGATAATA 59.579 40.000 10.02 0.00 35.07 0.98
1843 1895 3.161866 GGCAACAAAAGTTGGAGGGATA 58.838 45.455 10.02 0.00 35.07 2.59
1848 1900 1.538849 GCCAGGCAACAAAAGTTGGAG 60.539 52.381 6.55 0.00 41.41 3.86
1858 1910 4.196778 TGAACCGGCCAGGCAACA 62.197 61.111 15.19 2.47 46.52 3.33
1864 1916 1.003355 ACATGAGTGAACCGGCCAG 60.003 57.895 0.00 0.00 0.00 4.85
1867 1919 1.298859 GGTGACATGAGTGAACCGGC 61.299 60.000 0.00 0.00 0.00 6.13
1894 1946 9.891828 CAGTACACATAAACACACAATACAAAT 57.108 29.630 0.00 0.00 0.00 2.32
1950 2003 6.294675 GGTGAATCTCATCCACAATTTGTTCA 60.295 38.462 0.00 0.00 32.79 3.18
1963 2016 2.990066 AGAACGGGGTGAATCTCATC 57.010 50.000 0.00 0.00 0.00 2.92
2053 2106 5.696724 GTCGAGTTCCTCAAGATTTCTCAAA 59.303 40.000 0.00 0.00 0.00 2.69
2100 3099 3.775866 ACTAACCTCTAAAAGAGCCCTCC 59.224 47.826 0.00 0.00 40.98 4.30
2101 3100 4.712829 AGACTAACCTCTAAAAGAGCCCTC 59.287 45.833 0.00 0.00 40.98 4.30
2102 3101 4.690149 AGACTAACCTCTAAAAGAGCCCT 58.310 43.478 0.00 0.00 40.98 5.19
2104 3103 7.172868 AGTTAGACTAACCTCTAAAAGAGCC 57.827 40.000 19.55 0.00 40.98 4.70
2106 3105 9.240734 TGGTAGTTAGACTAACCTCTAAAAGAG 57.759 37.037 19.55 0.00 37.60 2.85
2109 3108 9.317827 ACATGGTAGTTAGACTAACCTCTAAAA 57.682 33.333 19.55 2.81 37.60 1.52
2126 3603 4.295141 TCCGGAATTTTGACATGGTAGT 57.705 40.909 0.00 0.00 0.00 2.73
2127 3604 5.581605 CATTCCGGAATTTTGACATGGTAG 58.418 41.667 27.21 7.40 0.00 3.18
2128 3605 4.142271 GCATTCCGGAATTTTGACATGGTA 60.142 41.667 27.21 0.00 0.00 3.25
2129 3606 3.368323 GCATTCCGGAATTTTGACATGGT 60.368 43.478 27.21 0.00 0.00 3.55
2130 3607 3.189285 GCATTCCGGAATTTTGACATGG 58.811 45.455 27.21 13.30 0.00 3.66
2132 3609 3.676873 GCTGCATTCCGGAATTTTGACAT 60.677 43.478 27.21 1.32 0.00 3.06
2133 3610 2.352617 GCTGCATTCCGGAATTTTGACA 60.353 45.455 27.21 17.47 0.00 3.58
2174 3652 2.289565 GTATTGCCCAGCTGGTTCTAC 58.710 52.381 30.63 20.42 36.04 2.59
2221 3699 5.337788 AGCCCTCAAAATGGTGGTTTTATA 58.662 37.500 0.00 0.00 30.56 0.98
2234 3712 0.881118 CGCAAAGCTAGCCCTCAAAA 59.119 50.000 12.13 0.00 0.00 2.44
2340 3818 5.351465 CGCCTGTCATAAACTCACTTAACAT 59.649 40.000 0.00 0.00 0.00 2.71
2382 3860 0.308376 TACAAAAAGTTCCGCCACGC 59.692 50.000 0.00 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.