Multiple sequence alignment - TraesCS4B01G236800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G236800 chr4B 100.000 3893 0 0 1 3893 495017378 495013486 0.000000e+00 7190.0
1 TraesCS4B01G236800 chr4B 92.045 176 13 1 3221 3396 331863279 331863453 3.000000e-61 246.0
2 TraesCS4B01G236800 chr4B 100.000 60 0 0 2950 3009 495014350 495014291 1.140000e-20 111.0
3 TraesCS4B01G236800 chr4B 100.000 60 0 0 3029 3088 495014429 495014370 1.140000e-20 111.0
4 TraesCS4B01G236800 chr4B 92.000 75 2 4 3156 3228 562048908 562048980 6.880000e-18 102.0
5 TraesCS4B01G236800 chr4D 96.319 2309 73 5 708 3009 400649670 400647367 0.000000e+00 3783.0
6 TraesCS4B01G236800 chr4D 93.056 504 28 3 3392 3893 400647314 400646816 0.000000e+00 730.0
7 TraesCS4B01G236800 chr4D 82.477 428 44 17 248 654 400650097 400649680 2.880000e-91 346.0
8 TraesCS4B01G236800 chr4D 95.918 98 4 0 3042 3139 400647413 400647316 4.030000e-35 159.0
9 TraesCS4B01G236800 chr4D 92.857 70 3 2 99 168 400650298 400650231 2.480000e-17 100.0
10 TraesCS4B01G236800 chr4A 95.051 2243 86 15 761 2989 58515267 58513036 0.000000e+00 3504.0
11 TraesCS4B01G236800 chr4A 80.438 685 59 34 99 755 58518036 58517399 1.650000e-123 453.0
12 TraesCS4B01G236800 chr4A 84.831 178 7 12 3221 3398 9062594 9062751 1.120000e-35 161.0
13 TraesCS4B01G236800 chr4A 92.233 103 8 0 3418 3520 58507582 58507480 3.130000e-31 147.0
14 TraesCS4B01G236800 chr4A 90.110 91 8 1 3065 3155 58507669 58507580 2.460000e-22 117.0
15 TraesCS4B01G236800 chr4A 100.000 40 0 0 3029 3068 58513075 58513036 1.500000e-09 75.0
16 TraesCS4B01G236800 chr7B 96.629 178 6 0 3221 3398 653432264 653432087 2.940000e-76 296.0
17 TraesCS4B01G236800 chr7B 96.591 176 6 0 3221 3396 453929760 453929935 3.800000e-75 292.0
18 TraesCS4B01G236800 chr7B 80.000 195 34 5 3702 3893 726491905 726491713 5.240000e-29 139.0
19 TraesCS4B01G236800 chr7B 98.182 55 0 1 3175 3228 196656785 196656839 1.150000e-15 95.3
20 TraesCS4B01G236800 chr1B 96.610 177 6 0 3221 3397 480590802 480590626 1.060000e-75 294.0
21 TraesCS4B01G236800 chr1B 93.939 66 1 3 3164 3228 457074257 457074320 3.200000e-16 97.1
22 TraesCS4B01G236800 chr5B 96.591 176 6 0 3221 3396 497004605 497004430 3.800000e-75 292.0
23 TraesCS4B01G236800 chr5B 94.475 181 10 0 3221 3401 455354376 455354556 2.960000e-71 279.0
24 TraesCS4B01G236800 chr5B 79.126 206 34 8 3692 3893 433802081 433801881 2.440000e-27 134.0
25 TraesCS4B01G236800 chr5B 93.548 62 1 3 3168 3228 402743764 402743823 5.360000e-14 89.8
26 TraesCS4B01G236800 chr5B 94.286 35 2 0 3150 3184 458619969 458619935 2.000000e-03 54.7
27 TraesCS4B01G236800 chr3B 96.591 176 6 0 3221 3396 122720565 122720740 3.800000e-75 292.0
28 TraesCS4B01G236800 chr3B 96.591 176 6 0 3221 3396 631180160 631179985 3.800000e-75 292.0
29 TraesCS4B01G236800 chr3B 91.398 186 16 0 3221 3406 763836824 763837009 4.990000e-64 255.0
30 TraesCS4B01G236800 chr3B 93.750 64 1 3 3164 3226 122720452 122720513 4.140000e-15 93.5
31 TraesCS4B01G236800 chr3B 94.286 35 2 0 3150 3184 204284590 204284556 2.000000e-03 54.7
32 TraesCS4B01G236800 chr2B 96.591 176 6 0 3221 3396 82005965 82005790 3.800000e-75 292.0
33 TraesCS4B01G236800 chr2B 96.591 176 6 0 3221 3396 177180701 177180876 3.800000e-75 292.0
34 TraesCS4B01G236800 chr2B 89.326 178 15 3 3221 3398 565650099 565650272 1.820000e-53 220.0
35 TraesCS4B01G236800 chr7A 91.257 183 15 1 3221 3403 87448092 87448273 8.350000e-62 248.0
36 TraesCS4B01G236800 chr6A 88.083 193 22 1 3221 3412 487234991 487235183 1.090000e-55 228.0
37 TraesCS4B01G236800 chr2D 87.978 183 19 2 3221 3403 118528888 118529067 3.050000e-51 213.0
38 TraesCS4B01G236800 chr2D 98.182 55 0 1 3175 3228 648643072 648643126 1.150000e-15 95.3
39 TraesCS4B01G236800 chr5D 81.435 237 43 1 3521 3756 207181007 207181243 3.970000e-45 193.0
40 TraesCS4B01G236800 chr6B 78.077 260 36 13 3634 3890 157582577 157582818 1.130000e-30 145.0
41 TraesCS4B01G236800 chr6B 77.692 260 37 13 3634 3890 157584390 157584631 5.240000e-29 139.0
42 TraesCS4B01G236800 chr6B 98.113 53 0 1 3177 3228 703748968 703748916 1.490000e-14 91.6
43 TraesCS4B01G236800 chr6B 80.612 98 19 0 3795 3892 617188651 617188748 4.170000e-10 76.8
44 TraesCS4B01G236800 chr1D 98.182 55 0 1 3175 3228 380770901 380770955 1.150000e-15 95.3
45 TraesCS4B01G236800 chr1D 95.082 61 0 3 3170 3228 386787705 386787646 4.140000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G236800 chr4B 495013486 495017378 3892 True 2470.666667 7190 100.0000 1 3893 3 chr4B.!!$R1 3892
1 TraesCS4B01G236800 chr4D 400646816 400650298 3482 True 1023.600000 3783 92.1254 99 3893 5 chr4D.!!$R1 3794
2 TraesCS4B01G236800 chr4A 58513036 58515267 2231 True 1789.500000 3504 97.5255 761 3068 2 chr4A.!!$R3 2307
3 TraesCS4B01G236800 chr4A 58517399 58518036 637 True 453.000000 453 80.4380 99 755 1 chr4A.!!$R1 656

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
259 351 0.669625 GCAGTGGTACCGGACAAGTC 60.670 60.0 9.46 0.0 0.0 3.01 F
1340 1501 0.545787 AACGTCACCTACCCCATCCA 60.546 55.0 0.00 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2199 2360 0.837940 GGAAGGTGTAGTCCCCATCC 59.162 60.0 0.0 0.0 0.0 3.51 R
3019 3184 0.035439 ATCACTGCACGGGTTTAGGG 60.035 55.0 0.0 0.0 0.0 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 5.381184 TCTCAATCTACTGAGACCTAGCT 57.619 43.478 0.00 0.00 45.45 3.32
71 72 6.502074 TCTCAATCTACTGAGACCTAGCTA 57.498 41.667 0.00 0.00 45.45 3.32
72 73 6.292923 TCTCAATCTACTGAGACCTAGCTAC 58.707 44.000 0.00 0.00 45.45 3.58
73 74 6.002653 TCAATCTACTGAGACCTAGCTACA 57.997 41.667 0.00 0.00 33.41 2.74
74 75 5.823570 TCAATCTACTGAGACCTAGCTACAC 59.176 44.000 0.00 0.00 33.41 2.90
75 76 4.153673 TCTACTGAGACCTAGCTACACC 57.846 50.000 0.00 0.00 0.00 4.16
76 77 2.146920 ACTGAGACCTAGCTACACCC 57.853 55.000 0.00 0.00 0.00 4.61
77 78 1.358103 ACTGAGACCTAGCTACACCCA 59.642 52.381 0.00 0.00 0.00 4.51
78 79 2.023888 ACTGAGACCTAGCTACACCCAT 60.024 50.000 0.00 0.00 0.00 4.00
79 80 3.034635 CTGAGACCTAGCTACACCCATT 58.965 50.000 0.00 0.00 0.00 3.16
80 81 3.450904 TGAGACCTAGCTACACCCATTT 58.549 45.455 0.00 0.00 0.00 2.32
81 82 3.451178 TGAGACCTAGCTACACCCATTTC 59.549 47.826 0.00 0.00 0.00 2.17
82 83 3.707102 GAGACCTAGCTACACCCATTTCT 59.293 47.826 0.00 0.00 0.00 2.52
83 84 4.104831 AGACCTAGCTACACCCATTTCTT 58.895 43.478 0.00 0.00 0.00 2.52
84 85 4.536489 AGACCTAGCTACACCCATTTCTTT 59.464 41.667 0.00 0.00 0.00 2.52
85 86 4.844884 ACCTAGCTACACCCATTTCTTTC 58.155 43.478 0.00 0.00 0.00 2.62
86 87 4.200092 CCTAGCTACACCCATTTCTTTCC 58.800 47.826 0.00 0.00 0.00 3.13
87 88 3.087370 AGCTACACCCATTTCTTTCCC 57.913 47.619 0.00 0.00 0.00 3.97
88 89 2.649816 AGCTACACCCATTTCTTTCCCT 59.350 45.455 0.00 0.00 0.00 4.20
89 90 3.076032 AGCTACACCCATTTCTTTCCCTT 59.924 43.478 0.00 0.00 0.00 3.95
90 91 3.444034 GCTACACCCATTTCTTTCCCTTC 59.556 47.826 0.00 0.00 0.00 3.46
91 92 3.903530 ACACCCATTTCTTTCCCTTCT 57.096 42.857 0.00 0.00 0.00 2.85
92 93 4.199002 ACACCCATTTCTTTCCCTTCTT 57.801 40.909 0.00 0.00 0.00 2.52
93 94 4.152647 ACACCCATTTCTTTCCCTTCTTC 58.847 43.478 0.00 0.00 0.00 2.87
94 95 4.140924 ACACCCATTTCTTTCCCTTCTTCT 60.141 41.667 0.00 0.00 0.00 2.85
95 96 5.074515 ACACCCATTTCTTTCCCTTCTTCTA 59.925 40.000 0.00 0.00 0.00 2.10
96 97 6.190587 CACCCATTTCTTTCCCTTCTTCTAT 58.809 40.000 0.00 0.00 0.00 1.98
97 98 6.665248 CACCCATTTCTTTCCCTTCTTCTATT 59.335 38.462 0.00 0.00 0.00 1.73
148 236 2.492088 GGGTAAACCTGAATCACTTGCC 59.508 50.000 0.00 0.00 35.85 4.52
152 240 2.753966 CCTGAATCACTTGCCGCGG 61.754 63.158 24.05 24.05 0.00 6.46
157 245 3.958147 ATCACTTGCCGCGGTCCTG 62.958 63.158 28.70 16.53 0.00 3.86
173 263 3.769300 GGTCCTGGTTTTATGCTTTGGAT 59.231 43.478 0.00 0.00 0.00 3.41
174 264 4.381932 GGTCCTGGTTTTATGCTTTGGATG 60.382 45.833 0.00 0.00 0.00 3.51
198 290 2.487265 GCCCATGGGATCATACGTCTTT 60.487 50.000 36.00 0.00 37.50 2.52
204 296 1.268896 GGATCATACGTCTTTCGGCGA 60.269 52.381 4.99 4.99 44.69 5.54
219 311 1.573436 GCGACGATACCGGGACTAG 59.427 63.158 6.32 0.00 40.78 2.57
222 314 1.003116 CGACGATACCGGGACTAGTTG 60.003 57.143 6.32 0.00 40.78 3.16
223 315 1.336125 GACGATACCGGGACTAGTTGG 59.664 57.143 6.32 2.35 40.78 3.77
226 318 2.664015 GATACCGGGACTAGTTGGTCT 58.336 52.381 16.00 8.90 35.93 3.85
227 319 2.610438 TACCGGGACTAGTTGGTCTT 57.390 50.000 16.00 0.00 35.93 3.01
228 320 2.610438 ACCGGGACTAGTTGGTCTTA 57.390 50.000 6.32 0.00 36.55 2.10
229 321 3.111741 ACCGGGACTAGTTGGTCTTAT 57.888 47.619 6.32 0.00 36.55 1.73
230 322 3.029570 ACCGGGACTAGTTGGTCTTATC 58.970 50.000 6.32 0.00 36.55 1.75
231 323 3.028850 CCGGGACTAGTTGGTCTTATCA 58.971 50.000 0.00 0.00 36.55 2.15
232 324 3.449737 CCGGGACTAGTTGGTCTTATCAA 59.550 47.826 0.00 0.00 36.55 2.57
248 340 1.960763 CAACGCAGCAGCAGTGGTA 60.961 57.895 0.82 0.00 42.27 3.25
259 351 0.669625 GCAGTGGTACCGGACAAGTC 60.670 60.000 9.46 0.00 0.00 3.01
286 382 2.239400 CTCGGCACCCAGATATCTACA 58.761 52.381 4.54 0.00 0.00 2.74
287 383 1.961394 TCGGCACCCAGATATCTACAC 59.039 52.381 4.54 0.00 0.00 2.90
288 384 1.335964 CGGCACCCAGATATCTACACG 60.336 57.143 4.54 1.46 0.00 4.49
289 385 1.000955 GGCACCCAGATATCTACACGG 59.999 57.143 4.54 2.29 0.00 4.94
307 403 1.841450 GGACGCTGTATCTGTACTGC 58.159 55.000 7.21 7.21 46.34 4.40
320 416 4.625028 TCTGTACTGCATATGATCAGTGC 58.375 43.478 22.36 22.36 42.83 4.40
322 418 4.122046 TGTACTGCATATGATCAGTGCAC 58.878 43.478 25.96 19.33 45.99 4.57
323 419 3.555527 ACTGCATATGATCAGTGCACT 57.444 42.857 25.96 15.25 43.30 4.40
324 420 4.677673 ACTGCATATGATCAGTGCACTA 57.322 40.909 25.96 3.85 43.30 2.74
328 424 6.014755 ACTGCATATGATCAGTGCACTATACT 60.015 38.462 25.96 4.08 43.30 2.12
329 425 6.762333 TGCATATGATCAGTGCACTATACTT 58.238 36.000 25.96 13.13 43.30 2.24
331 427 7.172019 TGCATATGATCAGTGCACTATACTTTG 59.828 37.037 25.96 12.81 43.30 2.77
332 428 5.998454 ATGATCAGTGCACTATACTTTGC 57.002 39.130 21.20 4.06 39.33 3.68
333 429 5.089970 TGATCAGTGCACTATACTTTGCT 57.910 39.130 21.20 0.00 39.62 3.91
334 430 6.220726 TGATCAGTGCACTATACTTTGCTA 57.779 37.500 21.20 0.00 39.62 3.49
335 431 6.639563 TGATCAGTGCACTATACTTTGCTAA 58.360 36.000 21.20 0.00 39.62 3.09
336 432 7.275183 TGATCAGTGCACTATACTTTGCTAAT 58.725 34.615 21.20 0.00 39.62 1.73
337 433 8.421002 TGATCAGTGCACTATACTTTGCTAATA 58.579 33.333 21.20 0.00 39.62 0.98
384 480 6.146510 TCAATAACTTGTTGGTTAGCGTGTAG 59.853 38.462 0.00 0.00 35.52 2.74
385 481 9.154928 TCAATAACTTGTTGGTTAGCGTGTAGC 62.155 40.741 0.00 0.00 38.72 3.58
397 493 1.730612 GCGTGTAGCCTACTGTTTTCC 59.269 52.381 3.13 0.00 40.81 3.13
399 495 3.660865 CGTGTAGCCTACTGTTTTCCTT 58.339 45.455 3.13 0.00 0.00 3.36
401 497 4.624452 CGTGTAGCCTACTGTTTTCCTTAC 59.376 45.833 3.13 0.00 0.00 2.34
402 498 5.566230 CGTGTAGCCTACTGTTTTCCTTACT 60.566 44.000 3.13 0.00 0.00 2.24
403 499 5.638234 GTGTAGCCTACTGTTTTCCTTACTG 59.362 44.000 3.13 0.00 0.00 2.74
404 500 3.676093 AGCCTACTGTTTTCCTTACTGC 58.324 45.455 0.00 0.00 0.00 4.40
405 501 3.328050 AGCCTACTGTTTTCCTTACTGCT 59.672 43.478 0.00 0.00 0.00 4.24
406 502 4.072839 GCCTACTGTTTTCCTTACTGCTT 58.927 43.478 0.00 0.00 0.00 3.91
408 504 5.351740 GCCTACTGTTTTCCTTACTGCTTAG 59.648 44.000 0.00 0.00 0.00 2.18
409 505 5.351740 CCTACTGTTTTCCTTACTGCTTAGC 59.648 44.000 0.00 0.00 0.00 3.09
554 691 2.902705 TCACACACGAAAGCTACCTT 57.097 45.000 0.00 0.00 0.00 3.50
631 771 1.748329 TAGCAGCCCGCCACATAGAG 61.748 60.000 0.00 0.00 44.04 2.43
639 779 1.338337 CCGCCACATAGAGTACCTGAG 59.662 57.143 0.00 0.00 0.00 3.35
642 782 3.031736 GCCACATAGAGTACCTGAGGAA 58.968 50.000 4.99 0.00 0.00 3.36
645 785 3.068873 CACATAGAGTACCTGAGGAAGCC 59.931 52.174 4.99 0.00 0.00 4.35
676 826 0.747255 ATAGCTGCCTCATCGTTCGT 59.253 50.000 0.00 0.00 0.00 3.85
683 833 1.909376 CCTCATCGTTCGTCATCGTT 58.091 50.000 0.00 0.00 38.33 3.85
739 889 2.843401 ATCATGCCTGCTTGCAAAAA 57.157 40.000 0.00 0.00 45.84 1.94
1340 1501 0.545787 AACGTCACCTACCCCATCCA 60.546 55.000 0.00 0.00 0.00 3.41
1587 1748 1.350351 AGCAAGCTGATGAACTCCAGT 59.650 47.619 0.00 0.00 33.19 4.00
1619 1780 3.521308 CTGCGGCCAACAACGTCAC 62.521 63.158 2.24 0.00 0.00 3.67
1620 1781 3.276846 GCGGCCAACAACGTCACT 61.277 61.111 2.24 0.00 0.00 3.41
1701 1862 4.227134 CCTCCGCTGCGCTATGGT 62.227 66.667 18.00 0.00 0.00 3.55
1968 2129 1.072159 GGACAAGCTGCTCACCAGT 59.928 57.895 1.00 0.00 43.71 4.00
1974 2135 1.227645 GCTGCTCACCAGTGTGTCA 60.228 57.895 0.00 0.00 43.71 3.58
2199 2360 3.490759 GGCATATCCATCGGCGCG 61.491 66.667 0.00 0.00 34.01 6.86
2302 2463 4.103103 TGCCGTCGTCGAGCTCAG 62.103 66.667 15.40 6.88 39.71 3.35
2303 2464 4.104417 GCCGTCGTCGAGCTCAGT 62.104 66.667 15.40 0.00 39.71 3.41
2307 2471 1.803943 GTCGTCGAGCTCAGTGGAT 59.196 57.895 15.40 0.00 0.00 3.41
2436 2600 1.596934 GAACATCCTCCTCACCGCA 59.403 57.895 0.00 0.00 0.00 5.69
2787 2951 2.365068 CGACGTCGTGTTCAGCCTG 61.365 63.158 29.08 0.00 34.11 4.85
2841 3005 1.406887 GGGTTCGAGAAGCTATGGCAA 60.407 52.381 13.66 0.00 41.70 4.52
2920 3085 5.410439 GGGAACAAACTGAATTTAGCGACTA 59.590 40.000 0.00 0.00 0.00 2.59
3006 3171 6.262049 TGTGTGTCACTGTAATTTACTGCAAT 59.738 34.615 11.94 0.00 35.11 3.56
3007 3172 6.578545 GTGTGTCACTGTAATTTACTGCAATG 59.421 38.462 11.94 5.26 0.00 2.82
3008 3173 5.569059 GTGTCACTGTAATTTACTGCAATGC 59.431 40.000 11.94 0.00 0.00 3.56
3009 3174 5.240403 TGTCACTGTAATTTACTGCAATGCA 59.760 36.000 7.99 7.99 36.92 3.96
3010 3175 6.148948 GTCACTGTAATTTACTGCAATGCAA 58.851 36.000 9.92 0.00 38.41 4.08
3011 3176 6.640499 GTCACTGTAATTTACTGCAATGCAAA 59.360 34.615 9.92 0.69 38.41 3.68
3012 3177 6.640499 TCACTGTAATTTACTGCAATGCAAAC 59.360 34.615 9.92 0.18 38.41 2.93
3013 3178 5.925969 ACTGTAATTTACTGCAATGCAAACC 59.074 36.000 9.92 0.00 38.41 3.27
3014 3179 5.233988 TGTAATTTACTGCAATGCAAACCC 58.766 37.500 9.92 0.00 38.41 4.11
3015 3180 4.622260 AATTTACTGCAATGCAAACCCT 57.378 36.364 9.92 0.00 38.41 4.34
3016 3181 5.736951 AATTTACTGCAATGCAAACCCTA 57.263 34.783 9.92 0.00 38.41 3.53
3017 3182 5.736951 ATTTACTGCAATGCAAACCCTAA 57.263 34.783 9.92 0.00 38.41 2.69
3018 3183 5.537300 TTTACTGCAATGCAAACCCTAAA 57.463 34.783 9.92 3.92 38.41 1.85
3019 3184 3.385193 ACTGCAATGCAAACCCTAAAC 57.615 42.857 9.92 0.00 38.41 2.01
3020 3185 2.037121 ACTGCAATGCAAACCCTAAACC 59.963 45.455 9.92 0.00 38.41 3.27
3021 3186 1.346068 TGCAATGCAAACCCTAAACCC 59.654 47.619 5.01 0.00 34.76 4.11
3022 3187 1.623311 GCAATGCAAACCCTAAACCCT 59.377 47.619 0.00 0.00 0.00 4.34
3023 3188 2.829120 GCAATGCAAACCCTAAACCCTA 59.171 45.455 0.00 0.00 0.00 3.53
3024 3189 3.259625 GCAATGCAAACCCTAAACCCTAA 59.740 43.478 0.00 0.00 0.00 2.69
3025 3190 4.262678 GCAATGCAAACCCTAAACCCTAAA 60.263 41.667 0.00 0.00 0.00 1.85
3026 3191 5.234752 CAATGCAAACCCTAAACCCTAAAC 58.765 41.667 0.00 0.00 0.00 2.01
3027 3192 3.232662 TGCAAACCCTAAACCCTAAACC 58.767 45.455 0.00 0.00 0.00 3.27
3028 3193 2.564062 GCAAACCCTAAACCCTAAACCC 59.436 50.000 0.00 0.00 0.00 4.11
3029 3194 2.821378 CAAACCCTAAACCCTAAACCCG 59.179 50.000 0.00 0.00 0.00 5.28
3030 3195 1.746157 ACCCTAAACCCTAAACCCGT 58.254 50.000 0.00 0.00 0.00 5.28
3031 3196 1.352017 ACCCTAAACCCTAAACCCGTG 59.648 52.381 0.00 0.00 0.00 4.94
3032 3197 1.456296 CCTAAACCCTAAACCCGTGC 58.544 55.000 0.00 0.00 0.00 5.34
3033 3198 1.271488 CCTAAACCCTAAACCCGTGCA 60.271 52.381 0.00 0.00 0.00 4.57
3034 3199 2.081462 CTAAACCCTAAACCCGTGCAG 58.919 52.381 0.00 0.00 0.00 4.41
3035 3200 0.184211 AAACCCTAAACCCGTGCAGT 59.816 50.000 0.00 0.00 0.00 4.40
3036 3201 0.536460 AACCCTAAACCCGTGCAGTG 60.536 55.000 0.00 0.00 0.00 3.66
3037 3202 1.373435 CCCTAAACCCGTGCAGTGA 59.627 57.895 0.00 0.00 0.00 3.41
3038 3203 0.035439 CCCTAAACCCGTGCAGTGAT 60.035 55.000 0.00 0.00 0.00 3.06
3039 3204 1.613255 CCCTAAACCCGTGCAGTGATT 60.613 52.381 0.00 0.00 0.00 2.57
3040 3205 2.159382 CCTAAACCCGTGCAGTGATTT 58.841 47.619 0.00 0.00 0.00 2.17
3041 3206 3.340034 CCTAAACCCGTGCAGTGATTTA 58.660 45.455 0.00 0.00 0.00 1.40
3042 3207 3.945285 CCTAAACCCGTGCAGTGATTTAT 59.055 43.478 0.00 0.00 0.00 1.40
3043 3208 4.398044 CCTAAACCCGTGCAGTGATTTATT 59.602 41.667 0.00 0.00 0.00 1.40
3044 3209 4.864704 AAACCCGTGCAGTGATTTATTT 57.135 36.364 0.00 0.00 0.00 1.40
3045 3210 3.848272 ACCCGTGCAGTGATTTATTTG 57.152 42.857 0.00 0.00 0.00 2.32
3046 3211 2.491693 ACCCGTGCAGTGATTTATTTGG 59.508 45.455 0.00 0.00 0.00 3.28
3047 3212 2.491693 CCCGTGCAGTGATTTATTTGGT 59.508 45.455 0.00 0.00 0.00 3.67
3048 3213 3.056891 CCCGTGCAGTGATTTATTTGGTT 60.057 43.478 0.00 0.00 0.00 3.67
3049 3214 4.165779 CCGTGCAGTGATTTATTTGGTTC 58.834 43.478 0.00 0.00 0.00 3.62
3050 3215 3.845775 CGTGCAGTGATTTATTTGGTTCG 59.154 43.478 0.00 0.00 0.00 3.95
3051 3216 4.612712 CGTGCAGTGATTTATTTGGTTCGT 60.613 41.667 0.00 0.00 0.00 3.85
3052 3217 5.219633 GTGCAGTGATTTATTTGGTTCGTT 58.780 37.500 0.00 0.00 0.00 3.85
3053 3218 5.689961 GTGCAGTGATTTATTTGGTTCGTTT 59.310 36.000 0.00 0.00 0.00 3.60
3054 3219 6.200097 GTGCAGTGATTTATTTGGTTCGTTTT 59.800 34.615 0.00 0.00 0.00 2.43
3055 3220 6.199908 TGCAGTGATTTATTTGGTTCGTTTTG 59.800 34.615 0.00 0.00 0.00 2.44
3056 3221 6.200097 GCAGTGATTTATTTGGTTCGTTTTGT 59.800 34.615 0.00 0.00 0.00 2.83
3057 3222 7.554732 CAGTGATTTATTTGGTTCGTTTTGTG 58.445 34.615 0.00 0.00 0.00 3.33
3058 3223 7.433719 CAGTGATTTATTTGGTTCGTTTTGTGA 59.566 33.333 0.00 0.00 0.00 3.58
3059 3224 7.976734 AGTGATTTATTTGGTTCGTTTTGTGAA 59.023 29.630 0.00 0.00 0.00 3.18
3060 3225 8.760569 GTGATTTATTTGGTTCGTTTTGTGAAT 58.239 29.630 0.00 0.00 0.00 2.57
3061 3226 8.759641 TGATTTATTTGGTTCGTTTTGTGAATG 58.240 29.630 0.00 0.00 0.00 2.67
3062 3227 8.655651 ATTTATTTGGTTCGTTTTGTGAATGT 57.344 26.923 0.00 0.00 0.00 2.71
3063 3228 5.964887 ATTTGGTTCGTTTTGTGAATGTG 57.035 34.783 0.00 0.00 0.00 3.21
3064 3229 4.442375 TTGGTTCGTTTTGTGAATGTGT 57.558 36.364 0.00 0.00 0.00 3.72
3065 3230 3.763902 TGGTTCGTTTTGTGAATGTGTG 58.236 40.909 0.00 0.00 0.00 3.82
3066 3231 3.191581 TGGTTCGTTTTGTGAATGTGTGT 59.808 39.130 0.00 0.00 0.00 3.72
3067 3232 3.789224 GGTTCGTTTTGTGAATGTGTGTC 59.211 43.478 0.00 0.00 0.00 3.67
3068 3233 4.407818 GTTCGTTTTGTGAATGTGTGTCA 58.592 39.130 0.00 0.00 0.00 3.58
3069 3234 4.009798 TCGTTTTGTGAATGTGTGTCAC 57.990 40.909 0.00 0.00 44.67 3.67
3070 3235 3.687212 TCGTTTTGTGAATGTGTGTCACT 59.313 39.130 4.27 0.00 44.70 3.41
3071 3236 3.785521 CGTTTTGTGAATGTGTGTCACTG 59.214 43.478 4.27 0.00 44.70 3.66
3072 3237 4.671508 CGTTTTGTGAATGTGTGTCACTGT 60.672 41.667 4.27 0.00 44.70 3.55
3073 3238 5.446607 CGTTTTGTGAATGTGTGTCACTGTA 60.447 40.000 4.27 0.00 44.70 2.74
3074 3239 6.318628 GTTTTGTGAATGTGTGTCACTGTAA 58.681 36.000 4.27 0.00 44.70 2.41
3075 3240 6.691754 TTTGTGAATGTGTGTCACTGTAAT 57.308 33.333 4.27 0.00 44.70 1.89
3076 3241 6.691754 TTGTGAATGTGTGTCACTGTAATT 57.308 33.333 4.27 0.00 44.70 1.40
3077 3242 6.691754 TGTGAATGTGTGTCACTGTAATTT 57.308 33.333 4.27 0.00 44.70 1.82
3078 3243 7.793927 TGTGAATGTGTGTCACTGTAATTTA 57.206 32.000 4.27 0.00 44.70 1.40
3079 3244 7.635423 TGTGAATGTGTGTCACTGTAATTTAC 58.365 34.615 4.27 0.00 44.70 2.01
3080 3245 7.497579 TGTGAATGTGTGTCACTGTAATTTACT 59.502 33.333 4.27 0.00 44.70 2.24
3081 3246 7.798516 GTGAATGTGTGTCACTGTAATTTACTG 59.201 37.037 4.27 10.79 41.80 2.74
3082 3247 5.666969 TGTGTGTCACTGTAATTTACTGC 57.333 39.130 11.94 0.00 35.11 4.40
3083 3248 5.119694 TGTGTGTCACTGTAATTTACTGCA 58.880 37.500 11.94 0.00 35.11 4.41
3084 3249 5.586643 TGTGTGTCACTGTAATTTACTGCAA 59.413 36.000 11.94 0.50 35.11 4.08
3116 3281 6.311690 GCTTTACTCTGTAGACCAAAGATCAC 59.688 42.308 11.71 0.00 0.00 3.06
3127 3292 2.467305 CCAAAGATCACGTTTTGTTGCG 59.533 45.455 9.03 0.00 33.52 4.85
3144 3309 2.094904 CGGTTTCCGGCTGTAATGG 58.905 57.895 0.00 0.00 44.15 3.16
3145 3310 0.391927 CGGTTTCCGGCTGTAATGGA 60.392 55.000 0.00 0.00 44.15 3.41
3146 3311 1.745827 CGGTTTCCGGCTGTAATGGAT 60.746 52.381 0.00 0.00 44.15 3.41
3147 3312 2.484065 CGGTTTCCGGCTGTAATGGATA 60.484 50.000 0.00 0.00 44.15 2.59
3148 3313 2.876550 GGTTTCCGGCTGTAATGGATAC 59.123 50.000 0.00 0.00 34.28 2.24
3149 3314 3.433173 GGTTTCCGGCTGTAATGGATACT 60.433 47.826 0.00 0.00 35.08 2.12
3150 3315 4.202284 GGTTTCCGGCTGTAATGGATACTA 60.202 45.833 0.00 0.00 35.08 1.82
3151 3316 5.362263 GTTTCCGGCTGTAATGGATACTAA 58.638 41.667 0.00 0.00 35.42 2.24
3152 3317 4.595762 TCCGGCTGTAATGGATACTAAC 57.404 45.455 0.00 0.00 35.42 2.34
3153 3318 4.220724 TCCGGCTGTAATGGATACTAACT 58.779 43.478 0.00 0.00 35.42 2.24
3154 3319 5.387788 TCCGGCTGTAATGGATACTAACTA 58.612 41.667 0.00 0.00 35.42 2.24
3155 3320 5.834742 TCCGGCTGTAATGGATACTAACTAA 59.165 40.000 0.00 0.00 35.42 2.24
3156 3321 6.495872 TCCGGCTGTAATGGATACTAACTAAT 59.504 38.462 0.00 0.00 35.42 1.73
3157 3322 7.015877 TCCGGCTGTAATGGATACTAACTAATT 59.984 37.037 0.00 0.00 35.42 1.40
3158 3323 7.660208 CCGGCTGTAATGGATACTAACTAATTT 59.340 37.037 0.00 0.00 35.42 1.82
3159 3324 9.701098 CGGCTGTAATGGATACTAACTAATTTA 57.299 33.333 0.00 0.00 35.42 1.40
3176 3341 9.654663 AACTAATTTAGTGATCTAAACGCTCTT 57.345 29.630 9.78 0.00 45.19 2.85
3180 3345 8.859517 ATTTAGTGATCTAAACGCTCTTAGAC 57.140 34.615 6.54 3.41 45.19 2.59
3181 3346 7.627298 TTAGTGATCTAAACGCTCTTAGACT 57.373 36.000 6.54 4.16 39.98 3.24
3182 3347 8.728337 TTAGTGATCTAAACGCTCTTAGACTA 57.272 34.615 6.54 3.43 39.98 2.59
3183 3348 7.254227 AGTGATCTAAACGCTCTTAGACTAG 57.746 40.000 6.54 0.00 39.98 2.57
3184 3349 5.910723 GTGATCTAAACGCTCTTAGACTAGC 59.089 44.000 6.54 0.00 39.98 3.42
3185 3350 4.897025 TCTAAACGCTCTTAGACTAGCC 57.103 45.455 0.00 0.00 33.84 3.93
3186 3351 4.267536 TCTAAACGCTCTTAGACTAGCCA 58.732 43.478 0.00 0.00 33.84 4.75
3187 3352 2.943449 AACGCTCTTAGACTAGCCAC 57.057 50.000 0.00 0.00 35.22 5.01
3188 3353 1.835494 ACGCTCTTAGACTAGCCACA 58.165 50.000 0.00 0.00 35.22 4.17
3189 3354 2.379972 ACGCTCTTAGACTAGCCACAT 58.620 47.619 0.00 0.00 35.22 3.21
3190 3355 2.099921 ACGCTCTTAGACTAGCCACATG 59.900 50.000 0.00 0.00 35.22 3.21
3191 3356 2.544694 CGCTCTTAGACTAGCCACATGG 60.545 54.545 0.00 0.00 35.22 3.66
3192 3357 2.224161 GCTCTTAGACTAGCCACATGGG 60.224 54.545 0.00 0.00 40.85 4.00
3193 3358 3.300388 CTCTTAGACTAGCCACATGGGA 58.700 50.000 0.00 0.00 40.01 4.37
3194 3359 3.300388 TCTTAGACTAGCCACATGGGAG 58.700 50.000 0.00 0.00 40.01 4.30
3195 3360 2.848678 TAGACTAGCCACATGGGAGT 57.151 50.000 0.00 0.00 40.01 3.85
3196 3361 2.848678 AGACTAGCCACATGGGAGTA 57.151 50.000 0.00 0.00 40.01 2.59
3197 3362 3.116096 AGACTAGCCACATGGGAGTAA 57.884 47.619 0.00 0.00 40.01 2.24
3198 3363 2.766828 AGACTAGCCACATGGGAGTAAC 59.233 50.000 0.00 0.00 40.01 2.50
3199 3364 2.766828 GACTAGCCACATGGGAGTAACT 59.233 50.000 0.00 0.00 40.01 2.24
3200 3365 3.182152 ACTAGCCACATGGGAGTAACTT 58.818 45.455 0.00 0.00 40.01 2.66
3201 3366 2.789409 AGCCACATGGGAGTAACTTC 57.211 50.000 0.00 0.00 40.01 3.01
3202 3367 1.066143 AGCCACATGGGAGTAACTTCG 60.066 52.381 0.00 0.00 40.01 3.79
3203 3368 2.012051 GCCACATGGGAGTAACTTCGG 61.012 57.143 0.00 0.00 40.01 4.30
3204 3369 1.278127 CCACATGGGAGTAACTTCGGT 59.722 52.381 0.00 0.00 40.01 4.69
3205 3370 2.498481 CCACATGGGAGTAACTTCGGTA 59.502 50.000 0.00 0.00 40.01 4.02
3206 3371 3.430374 CCACATGGGAGTAACTTCGGTAG 60.430 52.174 0.00 0.00 40.01 3.18
3207 3372 3.194968 CACATGGGAGTAACTTCGGTAGT 59.805 47.826 0.00 0.00 39.32 2.73
3208 3373 4.400251 CACATGGGAGTAACTTCGGTAGTA 59.600 45.833 0.00 0.00 35.54 1.82
3209 3374 5.018809 ACATGGGAGTAACTTCGGTAGTAA 58.981 41.667 0.00 0.00 35.54 2.24
3210 3375 5.105595 ACATGGGAGTAACTTCGGTAGTAAC 60.106 44.000 0.00 0.00 35.54 2.50
3211 3376 4.406456 TGGGAGTAACTTCGGTAGTAACA 58.594 43.478 0.00 0.00 35.54 2.41
3212 3377 5.018809 TGGGAGTAACTTCGGTAGTAACAT 58.981 41.667 0.00 0.00 35.54 2.71
3213 3378 5.126061 TGGGAGTAACTTCGGTAGTAACATC 59.874 44.000 0.00 0.00 35.54 3.06
3214 3379 5.269313 GGAGTAACTTCGGTAGTAACATCG 58.731 45.833 0.00 0.00 35.54 3.84
3215 3380 5.065218 GGAGTAACTTCGGTAGTAACATCGA 59.935 44.000 0.00 0.00 35.54 3.59
3216 3381 6.116680 AGTAACTTCGGTAGTAACATCGAG 57.883 41.667 0.00 0.00 35.54 4.04
3217 3382 5.645497 AGTAACTTCGGTAGTAACATCGAGT 59.355 40.000 0.00 0.00 35.54 4.18
3218 3383 4.612932 ACTTCGGTAGTAACATCGAGTC 57.387 45.455 0.00 0.00 34.56 3.36
3219 3384 3.376546 ACTTCGGTAGTAACATCGAGTCC 59.623 47.826 0.00 0.00 34.56 3.85
3220 3385 2.989909 TCGGTAGTAACATCGAGTCCA 58.010 47.619 0.00 0.00 0.00 4.02
3221 3386 3.346315 TCGGTAGTAACATCGAGTCCAA 58.654 45.455 0.00 0.00 0.00 3.53
3222 3387 3.127548 TCGGTAGTAACATCGAGTCCAAC 59.872 47.826 0.00 0.00 0.00 3.77
3223 3388 3.128242 CGGTAGTAACATCGAGTCCAACT 59.872 47.826 0.00 0.00 0.00 3.16
3224 3389 4.670347 GGTAGTAACATCGAGTCCAACTC 58.330 47.826 0.00 0.00 41.71 3.01
3225 3390 4.157289 GGTAGTAACATCGAGTCCAACTCA 59.843 45.833 7.78 0.00 45.30 3.41
3226 3391 4.442375 AGTAACATCGAGTCCAACTCAG 57.558 45.455 7.78 1.37 45.30 3.35
3227 3392 2.086054 AACATCGAGTCCAACTCAGC 57.914 50.000 7.78 0.00 45.30 4.26
3228 3393 1.261480 ACATCGAGTCCAACTCAGCT 58.739 50.000 7.78 0.00 45.30 4.24
3229 3394 2.447443 ACATCGAGTCCAACTCAGCTA 58.553 47.619 7.78 0.00 45.30 3.32
3230 3395 2.425312 ACATCGAGTCCAACTCAGCTAG 59.575 50.000 7.78 0.00 45.30 3.42
3231 3396 2.201921 TCGAGTCCAACTCAGCTAGT 57.798 50.000 7.78 0.00 45.30 2.57
3244 3409 6.835819 ACTCAGCTAGTTACTGTAACATCA 57.164 37.500 27.12 13.90 41.07 3.07
3245 3410 7.228314 ACTCAGCTAGTTACTGTAACATCAA 57.772 36.000 27.12 12.16 41.07 2.57
3246 3411 7.667557 ACTCAGCTAGTTACTGTAACATCAAA 58.332 34.615 27.12 10.89 41.07 2.69
3247 3412 8.314751 ACTCAGCTAGTTACTGTAACATCAAAT 58.685 33.333 27.12 11.85 41.07 2.32
3248 3413 8.479313 TCAGCTAGTTACTGTAACATCAAATG 57.521 34.615 27.12 18.20 41.07 2.32
3249 3414 8.094548 TCAGCTAGTTACTGTAACATCAAATGT 58.905 33.333 27.12 10.64 41.07 2.71
3250 3415 8.383619 CAGCTAGTTACTGTAACATCAAATGTC 58.616 37.037 27.12 9.51 44.07 3.06
3251 3416 7.549488 AGCTAGTTACTGTAACATCAAATGTCC 59.451 37.037 27.12 7.85 44.07 4.02
3252 3417 7.201617 GCTAGTTACTGTAACATCAAATGTCCC 60.202 40.741 27.12 1.55 44.07 4.46
3253 3418 6.539173 AGTTACTGTAACATCAAATGTCCCA 58.461 36.000 27.12 0.00 44.07 4.37
3254 3419 7.001674 AGTTACTGTAACATCAAATGTCCCAA 58.998 34.615 27.12 0.00 44.07 4.12
3255 3420 7.669722 AGTTACTGTAACATCAAATGTCCCAAT 59.330 33.333 27.12 3.45 44.07 3.16
3256 3421 6.271488 ACTGTAACATCAAATGTCCCAATG 57.729 37.500 0.00 0.00 44.07 2.82
3257 3422 5.070770 TGTAACATCAAATGTCCCAATGC 57.929 39.130 0.00 0.00 44.07 3.56
3258 3423 4.525874 TGTAACATCAAATGTCCCAATGCA 59.474 37.500 0.00 0.00 44.07 3.96
3259 3424 4.620589 AACATCAAATGTCCCAATGCAA 57.379 36.364 0.00 0.00 44.07 4.08
3260 3425 4.829872 ACATCAAATGTCCCAATGCAAT 57.170 36.364 0.00 0.00 39.92 3.56
3261 3426 5.936187 ACATCAAATGTCCCAATGCAATA 57.064 34.783 0.00 0.00 39.92 1.90
3262 3427 6.488769 ACATCAAATGTCCCAATGCAATAT 57.511 33.333 0.00 0.00 39.92 1.28
3263 3428 6.285224 ACATCAAATGTCCCAATGCAATATG 58.715 36.000 0.00 0.00 39.92 1.78
3264 3429 6.098552 ACATCAAATGTCCCAATGCAATATGA 59.901 34.615 0.00 0.00 39.92 2.15
3265 3430 6.151663 TCAAATGTCCCAATGCAATATGAG 57.848 37.500 0.00 0.00 0.00 2.90
3266 3431 5.657745 TCAAATGTCCCAATGCAATATGAGT 59.342 36.000 0.00 0.00 0.00 3.41
3267 3432 5.779529 AATGTCCCAATGCAATATGAGTC 57.220 39.130 0.00 0.00 0.00 3.36
3268 3433 4.508551 TGTCCCAATGCAATATGAGTCT 57.491 40.909 0.00 0.00 0.00 3.24
3269 3434 5.628797 TGTCCCAATGCAATATGAGTCTA 57.371 39.130 0.00 0.00 0.00 2.59
3270 3435 6.191657 TGTCCCAATGCAATATGAGTCTAT 57.808 37.500 0.00 0.00 0.00 1.98
3271 3436 7.315066 TGTCCCAATGCAATATGAGTCTATA 57.685 36.000 0.00 0.00 0.00 1.31
3272 3437 7.744733 TGTCCCAATGCAATATGAGTCTATAA 58.255 34.615 0.00 0.00 0.00 0.98
3273 3438 7.661437 TGTCCCAATGCAATATGAGTCTATAAC 59.339 37.037 0.00 0.00 0.00 1.89
3274 3439 7.119846 GTCCCAATGCAATATGAGTCTATAACC 59.880 40.741 0.00 0.00 0.00 2.85
3275 3440 7.017551 TCCCAATGCAATATGAGTCTATAACCT 59.982 37.037 0.00 0.00 0.00 3.50
3276 3441 8.321353 CCCAATGCAATATGAGTCTATAACCTA 58.679 37.037 0.00 0.00 0.00 3.08
3277 3442 9.725019 CCAATGCAATATGAGTCTATAACCTAA 57.275 33.333 0.00 0.00 0.00 2.69
3295 3460 9.754382 ATAACCTAATAAATGAAGCTTTGCATG 57.246 29.630 0.00 0.00 0.00 4.06
3296 3461 7.174107 ACCTAATAAATGAAGCTTTGCATGT 57.826 32.000 0.00 0.00 0.00 3.21
3297 3462 7.614494 ACCTAATAAATGAAGCTTTGCATGTT 58.386 30.769 0.00 1.51 0.00 2.71
3298 3463 8.748412 ACCTAATAAATGAAGCTTTGCATGTTA 58.252 29.630 0.00 3.50 0.00 2.41
3299 3464 9.754382 CCTAATAAATGAAGCTTTGCATGTTAT 57.246 29.630 0.00 5.41 0.00 1.89
3302 3467 6.956299 AAATGAAGCTTTGCATGTTATCAC 57.044 33.333 0.00 0.00 0.00 3.06
3303 3468 5.648178 ATGAAGCTTTGCATGTTATCACA 57.352 34.783 0.00 0.00 37.31 3.58
3304 3469 4.797471 TGAAGCTTTGCATGTTATCACAC 58.203 39.130 0.00 0.00 35.03 3.82
3305 3470 4.520111 TGAAGCTTTGCATGTTATCACACT 59.480 37.500 0.00 0.00 35.03 3.55
3306 3471 5.009911 TGAAGCTTTGCATGTTATCACACTT 59.990 36.000 0.00 0.00 35.03 3.16
3307 3472 6.206438 TGAAGCTTTGCATGTTATCACACTTA 59.794 34.615 0.00 0.00 35.03 2.24
3308 3473 6.764308 AGCTTTGCATGTTATCACACTTAT 57.236 33.333 0.00 0.00 35.03 1.73
3309 3474 6.558009 AGCTTTGCATGTTATCACACTTATG 58.442 36.000 0.00 0.00 35.03 1.90
3310 3475 6.151648 AGCTTTGCATGTTATCACACTTATGT 59.848 34.615 0.00 0.00 40.80 2.29
3311 3476 6.808212 GCTTTGCATGTTATCACACTTATGTT 59.192 34.615 0.00 0.00 36.72 2.71
3312 3477 7.967854 GCTTTGCATGTTATCACACTTATGTTA 59.032 33.333 0.00 0.00 36.72 2.41
3313 3478 9.277565 CTTTGCATGTTATCACACTTATGTTAC 57.722 33.333 0.00 0.00 36.72 2.50
3314 3479 8.560355 TTGCATGTTATCACACTTATGTTACT 57.440 30.769 0.00 0.00 36.72 2.24
3315 3480 9.660180 TTGCATGTTATCACACTTATGTTACTA 57.340 29.630 0.00 0.00 36.72 1.82
3316 3481 9.093970 TGCATGTTATCACACTTATGTTACTAC 57.906 33.333 0.00 0.00 36.72 2.73
3317 3482 8.548721 GCATGTTATCACACTTATGTTACTACC 58.451 37.037 0.00 0.00 36.72 3.18
3318 3483 9.042008 CATGTTATCACACTTATGTTACTACCC 57.958 37.037 0.00 0.00 36.72 3.69
3319 3484 8.136563 TGTTATCACACTTATGTTACTACCCA 57.863 34.615 0.00 0.00 36.72 4.51
3320 3485 8.036575 TGTTATCACACTTATGTTACTACCCAC 58.963 37.037 0.00 0.00 36.72 4.61
3321 3486 6.869206 ATCACACTTATGTTACTACCCACT 57.131 37.500 0.00 0.00 36.72 4.00
3322 3487 7.966339 ATCACACTTATGTTACTACCCACTA 57.034 36.000 0.00 0.00 36.72 2.74
3323 3488 7.966339 TCACACTTATGTTACTACCCACTAT 57.034 36.000 0.00 0.00 36.72 2.12
3324 3489 8.370266 TCACACTTATGTTACTACCCACTATT 57.630 34.615 0.00 0.00 36.72 1.73
3325 3490 8.255206 TCACACTTATGTTACTACCCACTATTG 58.745 37.037 0.00 0.00 36.72 1.90
3326 3491 8.255206 CACACTTATGTTACTACCCACTATTGA 58.745 37.037 0.00 0.00 36.72 2.57
3327 3492 8.475639 ACACTTATGTTACTACCCACTATTGAG 58.524 37.037 0.00 0.00 34.46 3.02
3328 3493 7.926555 CACTTATGTTACTACCCACTATTGAGG 59.073 40.741 0.00 0.00 0.00 3.86
3329 3494 7.622479 ACTTATGTTACTACCCACTATTGAGGT 59.378 37.037 0.00 0.00 37.69 3.85
3330 3495 9.139734 CTTATGTTACTACCCACTATTGAGGTA 57.860 37.037 0.00 0.00 35.02 3.08
3337 3502 7.598759 CTACCCACTATTGAGGTAGTAACAT 57.401 40.000 14.91 0.00 45.39 2.71
3338 3503 8.701908 CTACCCACTATTGAGGTAGTAACATA 57.298 38.462 14.91 0.00 45.39 2.29
3339 3504 7.598759 ACCCACTATTGAGGTAGTAACATAG 57.401 40.000 0.00 0.00 33.29 2.23
3340 3505 7.130775 ACCCACTATTGAGGTAGTAACATAGT 58.869 38.462 0.00 0.00 33.29 2.12
3341 3506 7.287235 ACCCACTATTGAGGTAGTAACATAGTC 59.713 40.741 0.00 0.00 33.29 2.59
3342 3507 7.506261 CCCACTATTGAGGTAGTAACATAGTCT 59.494 40.741 0.00 0.00 33.29 3.24
3343 3508 9.570468 CCACTATTGAGGTAGTAACATAGTCTA 57.430 37.037 0.00 0.00 33.29 2.59
3348 3513 9.884814 ATTGAGGTAGTAACATAGTCTAAGGAT 57.115 33.333 0.00 0.00 0.00 3.24
3380 3545 8.818622 ATGTTACTAGTGTATGTTACTCTCCA 57.181 34.615 5.39 0.00 34.65 3.86
3381 3546 8.048534 TGTTACTAGTGTATGTTACTCTCCAC 57.951 38.462 5.39 0.00 34.65 4.02
3382 3547 7.886970 TGTTACTAGTGTATGTTACTCTCCACT 59.113 37.037 5.39 0.00 37.04 4.00
3383 3548 6.761099 ACTAGTGTATGTTACTCTCCACTG 57.239 41.667 0.00 0.00 35.08 3.66
3384 3549 6.246919 ACTAGTGTATGTTACTCTCCACTGT 58.753 40.000 0.00 0.00 35.08 3.55
3385 3550 5.392767 AGTGTATGTTACTCTCCACTGTG 57.607 43.478 0.00 0.00 32.32 3.66
3386 3551 4.220821 AGTGTATGTTACTCTCCACTGTGG 59.779 45.833 20.86 20.86 39.43 4.17
3387 3552 2.770164 ATGTTACTCTCCACTGTGGC 57.230 50.000 22.02 6.68 37.47 5.01
3388 3553 1.717032 TGTTACTCTCCACTGTGGCT 58.283 50.000 22.02 6.66 37.47 4.75
3389 3554 2.884320 TGTTACTCTCCACTGTGGCTA 58.116 47.619 22.02 10.93 37.47 3.93
3390 3555 2.826128 TGTTACTCTCCACTGTGGCTAG 59.174 50.000 22.02 20.91 37.47 3.42
3391 3556 2.826725 GTTACTCTCCACTGTGGCTAGT 59.173 50.000 26.40 26.40 37.47 2.57
3392 3557 1.551452 ACTCTCCACTGTGGCTAGTC 58.449 55.000 22.02 0.00 37.47 2.59
3393 3558 1.076350 ACTCTCCACTGTGGCTAGTCT 59.924 52.381 22.02 4.13 37.47 3.24
3394 3559 2.175202 CTCTCCACTGTGGCTAGTCTT 58.825 52.381 22.02 0.00 37.47 3.01
3395 3560 3.245300 ACTCTCCACTGTGGCTAGTCTTA 60.245 47.826 22.02 1.14 37.47 2.10
3396 3561 3.957497 CTCTCCACTGTGGCTAGTCTTAT 59.043 47.826 22.02 0.00 37.47 1.73
3397 3562 5.125367 TCTCCACTGTGGCTAGTCTTATA 57.875 43.478 22.02 0.00 37.47 0.98
3400 3565 6.611642 TCTCCACTGTGGCTAGTCTTATATTT 59.388 38.462 22.02 0.00 37.47 1.40
3479 3645 6.366332 CGCTCTACTTTTATATACCAGGCTTG 59.634 42.308 0.00 0.00 0.00 4.01
3480 3646 6.147985 GCTCTACTTTTATATACCAGGCTTGC 59.852 42.308 0.00 0.00 0.00 4.01
3481 3647 7.374975 TCTACTTTTATATACCAGGCTTGCT 57.625 36.000 0.00 0.00 0.00 3.91
3482 3648 8.486942 TCTACTTTTATATACCAGGCTTGCTA 57.513 34.615 0.00 0.00 0.00 3.49
3483 3649 8.930527 TCTACTTTTATATACCAGGCTTGCTAA 58.069 33.333 0.00 0.00 0.00 3.09
3507 3673 7.913674 AAAGCCTAAAACTCAATAGACTGAG 57.086 36.000 0.00 0.00 46.94 3.35
3530 3696 8.520351 TGAGATTTAATCAAGTTCAGTCGACTA 58.480 33.333 19.57 0.00 0.00 2.59
3568 3734 2.601481 CACGAAGATTTGTGCTGGAC 57.399 50.000 0.12 0.00 35.92 4.02
3604 3770 1.573829 GACCTCGCGGCATTTTGTCA 61.574 55.000 6.13 0.00 0.00 3.58
3612 3778 2.808244 CGGCATTTTGTCACACTGTTT 58.192 42.857 0.00 0.00 0.00 2.83
3619 3785 3.865011 TTGTCACACTGTTTGCAACAT 57.135 38.095 0.00 0.00 41.26 2.71
3622 3788 3.056962 TGTCACACTGTTTGCAACATGTT 60.057 39.130 4.92 4.92 41.26 2.71
3634 3800 5.446143 TGCAACATGTTTTTCTATCGGTT 57.554 34.783 8.77 0.00 0.00 4.44
3694 3860 1.354040 GGTCACAACATCTGCTCTCG 58.646 55.000 0.00 0.00 0.00 4.04
3708 3874 0.852412 CTCTCGTCGTTCGTAGCACG 60.852 60.000 2.79 2.79 44.19 5.34
3710 3876 0.723790 CTCGTCGTTCGTAGCACGTT 60.724 55.000 8.22 0.00 43.14 3.99
3716 3882 1.762419 GTTCGTAGCACGTTGTCTCA 58.238 50.000 8.22 0.00 43.14 3.27
3722 3888 1.885850 GCACGTTGTCTCACCGGTT 60.886 57.895 2.97 0.00 0.00 4.44
3733 3899 3.361977 ACCGGTTGCAACATCCGC 61.362 61.111 29.55 11.86 43.03 5.54
3739 3905 0.737019 GTTGCAACATCCGCCATTGG 60.737 55.000 24.52 0.00 0.00 3.16
3740 3906 2.202783 GCAACATCCGCCATTGGC 60.203 61.111 18.10 18.10 46.75 4.52
3763 3929 5.694816 CGGTTGTATCATTTAGTTGCACAA 58.305 37.500 0.00 0.00 0.00 3.33
3799 3965 5.418840 ACTTGTCATTGACTGGAAAACTGTT 59.581 36.000 17.26 0.00 33.15 3.16
3806 3972 3.446873 TGACTGGAAAACTGTTGCAACAT 59.553 39.130 31.17 17.58 38.41 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 6.017440 GTGTAGCTAGGTCTCAGTAGATTGAG 60.017 46.154 0.00 0.00 44.74 3.02
50 51 5.823570 GTGTAGCTAGGTCTCAGTAGATTGA 59.176 44.000 0.00 0.00 33.30 2.57
51 52 5.009210 GGTGTAGCTAGGTCTCAGTAGATTG 59.991 48.000 0.00 0.00 33.30 2.67
52 53 5.134661 GGTGTAGCTAGGTCTCAGTAGATT 58.865 45.833 0.00 0.00 33.30 2.40
53 54 4.446600 GGGTGTAGCTAGGTCTCAGTAGAT 60.447 50.000 0.00 0.00 33.30 1.98
54 55 3.117963 GGGTGTAGCTAGGTCTCAGTAGA 60.118 52.174 0.00 0.00 0.00 2.59
55 56 3.215975 GGGTGTAGCTAGGTCTCAGTAG 58.784 54.545 0.00 0.00 0.00 2.57
56 57 2.579400 TGGGTGTAGCTAGGTCTCAGTA 59.421 50.000 0.00 0.00 0.00 2.74
57 58 1.358103 TGGGTGTAGCTAGGTCTCAGT 59.642 52.381 0.00 0.00 0.00 3.41
58 59 2.145397 TGGGTGTAGCTAGGTCTCAG 57.855 55.000 0.00 0.00 0.00 3.35
59 60 2.848678 ATGGGTGTAGCTAGGTCTCA 57.151 50.000 0.00 0.00 0.00 3.27
60 61 3.707102 AGAAATGGGTGTAGCTAGGTCTC 59.293 47.826 0.00 0.00 0.00 3.36
61 62 3.725634 AGAAATGGGTGTAGCTAGGTCT 58.274 45.455 0.00 0.00 0.00 3.85
62 63 4.489306 AAGAAATGGGTGTAGCTAGGTC 57.511 45.455 0.00 0.00 0.00 3.85
63 64 4.324331 GGAAAGAAATGGGTGTAGCTAGGT 60.324 45.833 0.00 0.00 0.00 3.08
64 65 4.200092 GGAAAGAAATGGGTGTAGCTAGG 58.800 47.826 0.00 0.00 0.00 3.02
65 66 4.080299 AGGGAAAGAAATGGGTGTAGCTAG 60.080 45.833 0.00 0.00 0.00 3.42
66 67 3.850173 AGGGAAAGAAATGGGTGTAGCTA 59.150 43.478 0.00 0.00 0.00 3.32
67 68 2.649816 AGGGAAAGAAATGGGTGTAGCT 59.350 45.455 0.00 0.00 0.00 3.32
68 69 3.087370 AGGGAAAGAAATGGGTGTAGC 57.913 47.619 0.00 0.00 0.00 3.58
69 70 4.923415 AGAAGGGAAAGAAATGGGTGTAG 58.077 43.478 0.00 0.00 0.00 2.74
70 71 5.074515 AGAAGAAGGGAAAGAAATGGGTGTA 59.925 40.000 0.00 0.00 0.00 2.90
71 72 3.903530 AGAAGGGAAAGAAATGGGTGT 57.096 42.857 0.00 0.00 0.00 4.16
72 73 4.411013 AGAAGAAGGGAAAGAAATGGGTG 58.589 43.478 0.00 0.00 0.00 4.61
73 74 4.749048 AGAAGAAGGGAAAGAAATGGGT 57.251 40.909 0.00 0.00 0.00 4.51
74 75 7.724490 AAATAGAAGAAGGGAAAGAAATGGG 57.276 36.000 0.00 0.00 0.00 4.00
75 76 9.686683 TCTAAATAGAAGAAGGGAAAGAAATGG 57.313 33.333 0.00 0.00 0.00 3.16
82 83 9.807921 ACAAACATCTAAATAGAAGAAGGGAAA 57.192 29.630 0.10 0.00 35.69 3.13
92 93 9.175312 ACTCGAGTCTACAAACATCTAAATAGA 57.825 33.333 13.58 0.00 36.65 1.98
93 94 9.227490 CACTCGAGTCTACAAACATCTAAATAG 57.773 37.037 16.96 0.00 0.00 1.73
94 95 8.953313 TCACTCGAGTCTACAAACATCTAAATA 58.047 33.333 16.96 0.00 0.00 1.40
95 96 7.827701 TCACTCGAGTCTACAAACATCTAAAT 58.172 34.615 16.96 0.00 0.00 1.40
96 97 7.210718 TCACTCGAGTCTACAAACATCTAAA 57.789 36.000 16.96 0.00 0.00 1.85
97 98 6.812879 TCACTCGAGTCTACAAACATCTAA 57.187 37.500 16.96 0.00 0.00 2.10
148 236 1.024579 AGCATAAAACCAGGACCGCG 61.025 55.000 0.00 0.00 0.00 6.46
152 240 4.381932 CCATCCAAAGCATAAAACCAGGAC 60.382 45.833 0.00 0.00 0.00 3.85
157 245 3.430790 GGCTCCATCCAAAGCATAAAACC 60.431 47.826 0.00 0.00 40.36 3.27
173 263 1.067295 GTATGATCCCATGGGCTCCA 58.933 55.000 27.93 22.56 38.19 3.86
174 264 0.036010 CGTATGATCCCATGGGCTCC 60.036 60.000 27.93 18.24 34.31 4.70
204 296 1.341383 ACCAACTAGTCCCGGTATCGT 60.341 52.381 9.27 0.00 33.95 3.73
212 304 4.430908 CGTTGATAAGACCAACTAGTCCC 58.569 47.826 0.00 0.00 41.11 4.46
219 311 1.804151 TGCTGCGTTGATAAGACCAAC 59.196 47.619 0.00 0.00 40.19 3.77
222 314 0.375106 GCTGCTGCGTTGATAAGACC 59.625 55.000 0.00 0.00 0.00 3.85
223 315 1.061711 CTGCTGCTGCGTTGATAAGAC 59.938 52.381 11.21 0.00 43.34 3.01
226 318 0.798159 CACTGCTGCTGCGTTGATAA 59.202 50.000 11.21 0.00 43.34 1.75
227 319 1.020861 CCACTGCTGCTGCGTTGATA 61.021 55.000 15.21 0.00 43.34 2.15
228 320 2.330372 CCACTGCTGCTGCGTTGAT 61.330 57.895 15.21 0.00 43.34 2.57
229 321 2.376228 TACCACTGCTGCTGCGTTGA 62.376 55.000 15.21 0.00 43.34 3.18
230 322 1.960763 TACCACTGCTGCTGCGTTG 60.961 57.895 11.21 9.79 43.34 4.10
231 323 1.961277 GTACCACTGCTGCTGCGTT 60.961 57.895 11.21 0.00 43.34 4.84
232 324 2.357517 GTACCACTGCTGCTGCGT 60.358 61.111 11.21 8.91 43.34 5.24
248 340 0.966920 AGTTGATCGACTTGTCCGGT 59.033 50.000 10.02 0.00 0.00 5.28
273 365 1.068472 GCGTCCGTGTAGATATCTGGG 60.068 57.143 15.79 10.78 0.00 4.45
274 366 1.880675 AGCGTCCGTGTAGATATCTGG 59.119 52.381 15.79 7.93 0.00 3.86
286 382 1.400846 CAGTACAGATACAGCGTCCGT 59.599 52.381 0.00 0.00 33.30 4.69
287 383 1.860399 GCAGTACAGATACAGCGTCCG 60.860 57.143 0.00 0.00 34.57 4.79
288 384 1.134367 TGCAGTACAGATACAGCGTCC 59.866 52.381 0.00 0.00 44.55 4.79
289 385 2.561733 TGCAGTACAGATACAGCGTC 57.438 50.000 0.00 0.00 44.55 5.19
307 403 7.387122 AGCAAAGTATAGTGCACTGATCATATG 59.613 37.037 29.57 18.76 43.42 1.78
328 424 7.255104 CCCTGTGCGATCTTTTATATTAGCAAA 60.255 37.037 0.00 0.00 35.05 3.68
329 425 6.204688 CCCTGTGCGATCTTTTATATTAGCAA 59.795 38.462 0.00 0.00 35.05 3.91
331 427 5.390991 GCCCTGTGCGATCTTTTATATTAGC 60.391 44.000 0.00 0.00 0.00 3.09
332 428 6.170675 GCCCTGTGCGATCTTTTATATTAG 57.829 41.667 0.00 0.00 0.00 1.73
360 456 5.103290 ACACGCTAACCAACAAGTTATTG 57.897 39.130 0.00 0.00 42.46 1.90
384 480 3.676093 AGCAGTAAGGAAAACAGTAGGC 58.324 45.455 0.00 0.00 0.00 3.93
385 481 5.351740 GCTAAGCAGTAAGGAAAACAGTAGG 59.648 44.000 0.00 0.00 0.00 3.18
388 484 4.515567 GTGCTAAGCAGTAAGGAAAACAGT 59.484 41.667 0.00 0.00 40.08 3.55
390 486 4.456535 TGTGCTAAGCAGTAAGGAAAACA 58.543 39.130 0.00 0.00 40.08 2.83
391 487 5.048713 ACATGTGCTAAGCAGTAAGGAAAAC 60.049 40.000 0.00 0.00 40.08 2.43
392 488 5.070001 ACATGTGCTAAGCAGTAAGGAAAA 58.930 37.500 0.00 0.00 40.08 2.29
394 490 4.286297 ACATGTGCTAAGCAGTAAGGAA 57.714 40.909 0.00 0.00 40.08 3.36
395 491 3.981071 ACATGTGCTAAGCAGTAAGGA 57.019 42.857 0.00 0.00 40.08 3.36
396 492 7.118390 GGATTATACATGTGCTAAGCAGTAAGG 59.882 40.741 9.11 0.00 40.08 2.69
397 493 7.875041 AGGATTATACATGTGCTAAGCAGTAAG 59.125 37.037 9.11 0.00 40.08 2.34
399 495 7.015195 TCAGGATTATACATGTGCTAAGCAGTA 59.985 37.037 9.11 0.00 40.08 2.74
401 497 6.226052 TCAGGATTATACATGTGCTAAGCAG 58.774 40.000 9.11 6.21 40.08 4.24
402 498 6.173427 TCAGGATTATACATGTGCTAAGCA 57.827 37.500 9.11 0.00 35.60 3.91
403 499 7.678947 AATCAGGATTATACATGTGCTAAGC 57.321 36.000 9.11 8.92 0.00 3.09
453 564 9.929180 GAAAGTGTATGCCAGATGATAATACTA 57.071 33.333 0.00 0.00 0.00 1.82
577 717 5.447818 GCAGCCATGTTTGATTACTCTGTAC 60.448 44.000 0.00 0.00 0.00 2.90
631 771 0.250513 CAGGTGGCTTCCTCAGGTAC 59.749 60.000 0.00 0.00 35.37 3.34
639 779 0.543749 ATAGACTGCAGGTGGCTTCC 59.456 55.000 19.93 0.00 45.15 3.46
642 782 0.755686 GCTATAGACTGCAGGTGGCT 59.244 55.000 19.93 11.78 45.15 4.75
676 826 2.675844 CGGCCTGTTTGATTAACGATGA 59.324 45.455 0.00 0.00 39.72 2.92
683 833 2.279935 AACACCGGCCTGTTTGATTA 57.720 45.000 0.00 0.00 29.66 1.75
739 889 2.224305 GCCTGCATTAGACCCGATTAGT 60.224 50.000 0.00 0.00 0.00 2.24
1024 1185 2.125350 GAGGGCGAGCAAGAGGTG 60.125 66.667 0.00 0.00 0.00 4.00
1025 1186 3.764466 CGAGGGCGAGCAAGAGGT 61.764 66.667 0.00 0.00 40.82 3.85
1340 1501 1.303888 TAGAAGGTGTCGCCGGAGT 60.304 57.895 5.05 0.00 43.70 3.85
1431 1592 3.303990 GCGAGACATTGAGCTTGTTGAAA 60.304 43.478 0.00 0.00 0.00 2.69
1523 1684 1.080093 CGCCACATGTAGGTGACGT 60.080 57.895 17.76 0.00 39.37 4.34
1607 1768 1.885388 TCGGCAGTGACGTTGTTGG 60.885 57.895 19.78 0.00 34.61 3.77
1608 1769 1.151777 AGTCGGCAGTGACGTTGTTG 61.152 55.000 19.78 0.00 43.70 3.33
1619 1780 1.374758 GTGGAGGTGAAGTCGGCAG 60.375 63.158 0.00 0.00 0.00 4.85
1620 1781 2.741092 GTGGAGGTGAAGTCGGCA 59.259 61.111 0.00 0.00 0.00 5.69
1694 1855 4.221422 TCGGGCTCGCACCATAGC 62.221 66.667 0.00 0.00 38.03 2.97
1695 1856 2.028190 CTCGGGCTCGCACCATAG 59.972 66.667 0.00 0.00 36.13 2.23
1764 1925 3.781770 GAGAGACCCCGCGATGCTG 62.782 68.421 8.23 0.00 0.00 4.41
1834 1995 1.600916 GCACCGTGGCCTTCTTCTT 60.601 57.895 3.32 0.00 0.00 2.52
1968 2129 3.065233 GCTTGTTGATGAACTGTGACACA 59.935 43.478 8.26 8.26 32.79 3.72
1974 2135 4.910195 TGATAGGCTTGTTGATGAACTGT 58.090 39.130 0.00 0.00 32.79 3.55
2060 2221 1.382146 TTGGCCCGGTAGTAGGAGG 60.382 63.158 0.00 0.00 0.00 4.30
2199 2360 0.837940 GGAAGGTGTAGTCCCCATCC 59.162 60.000 0.00 0.00 0.00 3.51
2436 2600 2.334023 GATATCCTGGCCCTGAAGTCT 58.666 52.381 0.00 0.00 0.00 3.24
2724 2888 3.965539 CTCCTCCGTGCAAGCCCTG 62.966 68.421 0.00 0.00 0.00 4.45
2822 2986 1.666189 GTTGCCATAGCTTCTCGAACC 59.334 52.381 0.00 0.00 40.80 3.62
2841 3005 1.985116 GTTCTCCTCCGAGCTGGGT 60.985 63.158 15.09 0.00 38.76 4.51
2920 3085 7.168905 CACCCAAACTAAGAACTTCCTAGATT 58.831 38.462 2.00 0.00 0.00 2.40
3006 3171 3.232662 GGTTTAGGGTTTAGGGTTTGCA 58.767 45.455 0.00 0.00 0.00 4.08
3007 3172 2.564062 GGGTTTAGGGTTTAGGGTTTGC 59.436 50.000 0.00 0.00 0.00 3.68
3008 3173 2.821378 CGGGTTTAGGGTTTAGGGTTTG 59.179 50.000 0.00 0.00 0.00 2.93
3009 3174 2.446666 ACGGGTTTAGGGTTTAGGGTTT 59.553 45.455 0.00 0.00 0.00 3.27
3010 3175 2.065007 ACGGGTTTAGGGTTTAGGGTT 58.935 47.619 0.00 0.00 0.00 4.11
3011 3176 1.352017 CACGGGTTTAGGGTTTAGGGT 59.648 52.381 0.00 0.00 0.00 4.34
3012 3177 1.951895 GCACGGGTTTAGGGTTTAGGG 60.952 57.143 0.00 0.00 0.00 3.53
3013 3178 1.271488 TGCACGGGTTTAGGGTTTAGG 60.271 52.381 0.00 0.00 0.00 2.69
3014 3179 2.081462 CTGCACGGGTTTAGGGTTTAG 58.919 52.381 0.00 0.00 0.00 1.85
3015 3180 1.420891 ACTGCACGGGTTTAGGGTTTA 59.579 47.619 0.00 0.00 0.00 2.01
3016 3181 0.184211 ACTGCACGGGTTTAGGGTTT 59.816 50.000 0.00 0.00 0.00 3.27
3017 3182 0.536460 CACTGCACGGGTTTAGGGTT 60.536 55.000 0.00 0.00 0.00 4.11
3018 3183 1.072505 CACTGCACGGGTTTAGGGT 59.927 57.895 0.00 0.00 0.00 4.34
3019 3184 0.035439 ATCACTGCACGGGTTTAGGG 60.035 55.000 0.00 0.00 0.00 3.53
3020 3185 1.821216 AATCACTGCACGGGTTTAGG 58.179 50.000 0.00 0.00 0.00 2.69
3021 3186 5.560966 AATAAATCACTGCACGGGTTTAG 57.439 39.130 5.02 0.00 0.00 1.85
3022 3187 5.336055 CCAAATAAATCACTGCACGGGTTTA 60.336 40.000 1.90 1.90 0.00 2.01
3023 3188 4.555262 CAAATAAATCACTGCACGGGTTT 58.445 39.130 0.00 0.00 0.00 3.27
3024 3189 3.056891 CCAAATAAATCACTGCACGGGTT 60.057 43.478 0.00 0.00 0.00 4.11
3025 3190 2.491693 CCAAATAAATCACTGCACGGGT 59.508 45.455 0.00 0.00 0.00 5.28
3026 3191 2.491693 ACCAAATAAATCACTGCACGGG 59.508 45.455 0.00 0.00 0.00 5.28
3027 3192 3.848272 ACCAAATAAATCACTGCACGG 57.152 42.857 0.00 0.00 0.00 4.94
3028 3193 3.845775 CGAACCAAATAAATCACTGCACG 59.154 43.478 0.00 0.00 0.00 5.34
3029 3194 4.794169 ACGAACCAAATAAATCACTGCAC 58.206 39.130 0.00 0.00 0.00 4.57
3030 3195 5.446143 AACGAACCAAATAAATCACTGCA 57.554 34.783 0.00 0.00 0.00 4.41
3031 3196 6.200097 ACAAAACGAACCAAATAAATCACTGC 59.800 34.615 0.00 0.00 0.00 4.40
3032 3197 7.433719 TCACAAAACGAACCAAATAAATCACTG 59.566 33.333 0.00 0.00 0.00 3.66
3033 3198 7.484975 TCACAAAACGAACCAAATAAATCACT 58.515 30.769 0.00 0.00 0.00 3.41
3034 3199 7.687005 TCACAAAACGAACCAAATAAATCAC 57.313 32.000 0.00 0.00 0.00 3.06
3035 3200 8.759641 CATTCACAAAACGAACCAAATAAATCA 58.240 29.630 0.00 0.00 0.00 2.57
3036 3201 8.760569 ACATTCACAAAACGAACCAAATAAATC 58.239 29.630 0.00 0.00 0.00 2.17
3037 3202 8.547069 CACATTCACAAAACGAACCAAATAAAT 58.453 29.630 0.00 0.00 0.00 1.40
3038 3203 7.545965 ACACATTCACAAAACGAACCAAATAAA 59.454 29.630 0.00 0.00 0.00 1.40
3039 3204 7.009631 CACACATTCACAAAACGAACCAAATAA 59.990 33.333 0.00 0.00 0.00 1.40
3040 3205 6.473778 CACACATTCACAAAACGAACCAAATA 59.526 34.615 0.00 0.00 0.00 1.40
3041 3206 5.290643 CACACATTCACAAAACGAACCAAAT 59.709 36.000 0.00 0.00 0.00 2.32
3042 3207 4.623167 CACACATTCACAAAACGAACCAAA 59.377 37.500 0.00 0.00 0.00 3.28
3043 3208 4.169508 CACACATTCACAAAACGAACCAA 58.830 39.130 0.00 0.00 0.00 3.67
3044 3209 3.191581 ACACACATTCACAAAACGAACCA 59.808 39.130 0.00 0.00 0.00 3.67
3045 3210 3.765026 ACACACATTCACAAAACGAACC 58.235 40.909 0.00 0.00 0.00 3.62
3046 3211 4.262045 GTGACACACATTCACAAAACGAAC 59.738 41.667 0.00 0.00 42.58 3.95
3047 3212 4.155099 AGTGACACACATTCACAAAACGAA 59.845 37.500 8.59 0.00 45.00 3.85
3048 3213 3.687212 AGTGACACACATTCACAAAACGA 59.313 39.130 8.59 0.00 45.00 3.85
3049 3214 3.785521 CAGTGACACACATTCACAAAACG 59.214 43.478 8.59 0.00 45.00 3.60
3050 3215 4.732784 ACAGTGACACACATTCACAAAAC 58.267 39.130 8.59 0.00 45.00 2.43
3051 3216 6.502136 TTACAGTGACACACATTCACAAAA 57.498 33.333 8.59 0.00 45.00 2.44
3052 3217 6.691754 ATTACAGTGACACACATTCACAAA 57.308 33.333 8.59 0.00 45.00 2.83
3053 3218 6.691754 AATTACAGTGACACACATTCACAA 57.308 33.333 8.59 0.00 45.00 3.33
3054 3219 6.691754 AAATTACAGTGACACACATTCACA 57.308 33.333 8.59 0.00 45.00 3.58
3055 3220 7.798516 CAGTAAATTACAGTGACACACATTCAC 59.201 37.037 8.59 0.00 43.24 3.18
3056 3221 7.519809 GCAGTAAATTACAGTGACACACATTCA 60.520 37.037 8.59 0.00 36.74 2.57
3057 3222 6.797033 GCAGTAAATTACAGTGACACACATTC 59.203 38.462 8.59 0.00 36.74 2.67
3058 3223 6.262049 TGCAGTAAATTACAGTGACACACATT 59.738 34.615 8.59 0.00 36.74 2.71
3059 3224 5.762711 TGCAGTAAATTACAGTGACACACAT 59.237 36.000 8.59 0.00 36.74 3.21
3060 3225 5.119694 TGCAGTAAATTACAGTGACACACA 58.880 37.500 8.59 0.00 36.74 3.72
3061 3226 5.666969 TGCAGTAAATTACAGTGACACAC 57.333 39.130 8.59 0.00 34.10 3.82
3062 3227 6.667370 CATTGCAGTAAATTACAGTGACACA 58.333 36.000 8.59 0.00 0.00 3.72
3063 3228 5.569059 GCATTGCAGTAAATTACAGTGACAC 59.431 40.000 3.15 0.00 0.00 3.67
3064 3229 5.473162 AGCATTGCAGTAAATTACAGTGACA 59.527 36.000 11.91 0.00 0.00 3.58
3065 3230 5.942872 AGCATTGCAGTAAATTACAGTGAC 58.057 37.500 11.91 0.00 0.00 3.67
3066 3231 6.573664 AAGCATTGCAGTAAATTACAGTGA 57.426 33.333 11.91 0.00 0.00 3.41
3067 3232 7.041187 CAAAGCATTGCAGTAAATTACAGTG 57.959 36.000 11.91 0.00 0.00 3.66
3082 3247 6.310197 GTCTACAGAGTAAAGCAAAGCATTG 58.690 40.000 0.00 0.00 39.65 2.82
3083 3248 5.412904 GGTCTACAGAGTAAAGCAAAGCATT 59.587 40.000 0.00 0.00 0.00 3.56
3084 3249 4.938226 GGTCTACAGAGTAAAGCAAAGCAT 59.062 41.667 0.00 0.00 0.00 3.79
3102 3267 5.504994 GCAACAAAACGTGATCTTTGGTCTA 60.505 40.000 13.40 0.00 36.94 2.59
3116 3281 1.203600 CCGGAAACCGCAACAAAACG 61.204 55.000 0.00 0.00 46.86 3.60
3127 3292 2.052782 ATCCATTACAGCCGGAAACC 57.947 50.000 5.05 0.00 31.18 3.27
3150 3315 9.654663 AAGAGCGTTTAGATCACTAAATTAGTT 57.345 29.630 2.41 0.00 46.01 2.24
3154 3319 9.303537 GTCTAAGAGCGTTTAGATCACTAAATT 57.696 33.333 13.64 0.00 46.01 1.82
3155 3320 8.688151 AGTCTAAGAGCGTTTAGATCACTAAAT 58.312 33.333 13.64 0.00 46.01 1.40
3156 3321 8.053026 AGTCTAAGAGCGTTTAGATCACTAAA 57.947 34.615 13.64 0.00 43.52 1.85
3157 3322 7.627298 AGTCTAAGAGCGTTTAGATCACTAA 57.373 36.000 13.64 0.00 40.64 2.24
3158 3323 7.041916 GCTAGTCTAAGAGCGTTTAGATCACTA 60.042 40.741 13.64 10.76 40.64 2.74
3159 3324 6.238538 GCTAGTCTAAGAGCGTTTAGATCACT 60.239 42.308 13.64 10.34 40.64 3.41
3160 3325 5.910723 GCTAGTCTAAGAGCGTTTAGATCAC 59.089 44.000 13.64 5.03 40.64 3.06
3161 3326 5.008811 GGCTAGTCTAAGAGCGTTTAGATCA 59.991 44.000 13.64 6.48 40.64 2.92
3162 3327 5.008811 TGGCTAGTCTAAGAGCGTTTAGATC 59.991 44.000 13.64 9.11 40.64 2.75
3163 3328 4.888239 TGGCTAGTCTAAGAGCGTTTAGAT 59.112 41.667 13.64 7.72 40.64 1.98
3164 3329 4.096081 GTGGCTAGTCTAAGAGCGTTTAGA 59.904 45.833 8.36 8.36 39.72 2.10
3165 3330 4.142447 TGTGGCTAGTCTAAGAGCGTTTAG 60.142 45.833 0.00 4.46 39.72 1.85
3166 3331 3.760151 TGTGGCTAGTCTAAGAGCGTTTA 59.240 43.478 0.00 0.00 39.72 2.01
3167 3332 2.561419 TGTGGCTAGTCTAAGAGCGTTT 59.439 45.455 0.00 0.00 39.72 3.60
3168 3333 2.168496 TGTGGCTAGTCTAAGAGCGTT 58.832 47.619 0.00 0.00 39.72 4.84
3169 3334 1.835494 TGTGGCTAGTCTAAGAGCGT 58.165 50.000 0.00 0.00 39.72 5.07
3170 3335 2.544694 CCATGTGGCTAGTCTAAGAGCG 60.545 54.545 0.00 0.00 39.72 5.03
3171 3336 2.224161 CCCATGTGGCTAGTCTAAGAGC 60.224 54.545 0.00 0.00 38.00 4.09
3172 3337 3.300388 TCCCATGTGGCTAGTCTAAGAG 58.700 50.000 0.00 0.00 0.00 2.85
3173 3338 3.300388 CTCCCATGTGGCTAGTCTAAGA 58.700 50.000 0.00 0.00 0.00 2.10
3174 3339 3.034635 ACTCCCATGTGGCTAGTCTAAG 58.965 50.000 0.00 0.00 0.00 2.18
3175 3340 3.116096 ACTCCCATGTGGCTAGTCTAA 57.884 47.619 0.00 0.00 0.00 2.10
3176 3341 2.848678 ACTCCCATGTGGCTAGTCTA 57.151 50.000 0.00 0.00 0.00 2.59
3177 3342 2.766828 GTTACTCCCATGTGGCTAGTCT 59.233 50.000 8.12 0.00 33.64 3.24
3178 3343 2.766828 AGTTACTCCCATGTGGCTAGTC 59.233 50.000 8.12 0.00 33.64 2.59
3179 3344 2.834113 AGTTACTCCCATGTGGCTAGT 58.166 47.619 9.37 9.37 35.16 2.57
3180 3345 3.738281 CGAAGTTACTCCCATGTGGCTAG 60.738 52.174 0.00 0.00 0.00 3.42
3181 3346 2.167693 CGAAGTTACTCCCATGTGGCTA 59.832 50.000 0.00 0.00 0.00 3.93
3182 3347 1.066143 CGAAGTTACTCCCATGTGGCT 60.066 52.381 0.00 0.00 0.00 4.75
3183 3348 1.369625 CGAAGTTACTCCCATGTGGC 58.630 55.000 0.00 0.00 0.00 5.01
3184 3349 1.278127 ACCGAAGTTACTCCCATGTGG 59.722 52.381 0.00 0.00 0.00 4.17
3185 3350 2.762535 ACCGAAGTTACTCCCATGTG 57.237 50.000 0.00 0.00 0.00 3.21
3186 3351 3.438183 ACTACCGAAGTTACTCCCATGT 58.562 45.455 0.00 0.00 33.35 3.21
3187 3352 5.105635 TGTTACTACCGAAGTTACTCCCATG 60.106 44.000 8.00 0.00 39.80 3.66
3188 3353 5.018809 TGTTACTACCGAAGTTACTCCCAT 58.981 41.667 8.00 0.00 39.80 4.00
3189 3354 4.406456 TGTTACTACCGAAGTTACTCCCA 58.594 43.478 8.00 0.00 39.80 4.37
3190 3355 5.586339 GATGTTACTACCGAAGTTACTCCC 58.414 45.833 8.00 0.00 39.80 4.30
3191 3356 5.065218 TCGATGTTACTACCGAAGTTACTCC 59.935 44.000 8.00 1.54 39.80 3.85
3192 3357 6.111768 TCGATGTTACTACCGAAGTTACTC 57.888 41.667 8.00 4.02 39.80 2.59
3193 3358 5.645497 ACTCGATGTTACTACCGAAGTTACT 59.355 40.000 8.00 0.00 39.80 2.24
3194 3359 5.873732 ACTCGATGTTACTACCGAAGTTAC 58.126 41.667 0.00 0.00 39.80 2.50
3195 3360 5.065218 GGACTCGATGTTACTACCGAAGTTA 59.935 44.000 0.00 0.00 39.80 2.24
3196 3361 4.142513 GGACTCGATGTTACTACCGAAGTT 60.143 45.833 0.00 0.00 39.80 2.66
3197 3362 3.376546 GGACTCGATGTTACTACCGAAGT 59.623 47.826 0.00 0.00 42.62 3.01
3198 3363 3.376234 TGGACTCGATGTTACTACCGAAG 59.624 47.826 0.00 0.00 0.00 3.79
3199 3364 3.346315 TGGACTCGATGTTACTACCGAA 58.654 45.455 0.00 0.00 0.00 4.30
3200 3365 2.989909 TGGACTCGATGTTACTACCGA 58.010 47.619 0.00 0.00 0.00 4.69
3201 3366 3.128242 AGTTGGACTCGATGTTACTACCG 59.872 47.826 0.00 0.00 0.00 4.02
3202 3367 4.670347 GAGTTGGACTCGATGTTACTACC 58.330 47.826 0.00 0.00 35.28 3.18
3221 3386 6.835819 TGATGTTACAGTAACTAGCTGAGT 57.164 37.500 21.56 0.00 41.56 3.41
3222 3387 8.598924 CATTTGATGTTACAGTAACTAGCTGAG 58.401 37.037 21.56 6.36 39.38 3.35
3223 3388 8.094548 ACATTTGATGTTACAGTAACTAGCTGA 58.905 33.333 21.56 3.59 41.63 4.26
3224 3389 8.256611 ACATTTGATGTTACAGTAACTAGCTG 57.743 34.615 21.56 14.01 41.63 4.24
3225 3390 7.549488 GGACATTTGATGTTACAGTAACTAGCT 59.451 37.037 21.56 6.57 45.03 3.32
3226 3391 7.201617 GGGACATTTGATGTTACAGTAACTAGC 60.202 40.741 21.56 12.59 45.03 3.42
3227 3392 7.822334 TGGGACATTTGATGTTACAGTAACTAG 59.178 37.037 21.56 8.25 45.03 2.57
3228 3393 7.681679 TGGGACATTTGATGTTACAGTAACTA 58.318 34.615 21.56 10.50 45.03 2.24
3229 3394 6.539173 TGGGACATTTGATGTTACAGTAACT 58.461 36.000 21.56 9.41 45.03 2.24
3230 3395 6.811253 TGGGACATTTGATGTTACAGTAAC 57.189 37.500 15.58 15.58 45.03 2.50
3231 3396 7.576666 GCATTGGGACATTTGATGTTACAGTAA 60.577 37.037 0.00 0.00 45.03 2.24
3232 3397 6.127758 GCATTGGGACATTTGATGTTACAGTA 60.128 38.462 0.00 0.00 45.03 2.74
3233 3398 5.336690 GCATTGGGACATTTGATGTTACAGT 60.337 40.000 0.00 0.00 45.03 3.55
3234 3399 5.104374 GCATTGGGACATTTGATGTTACAG 58.896 41.667 0.00 0.00 45.03 2.74
3235 3400 4.525874 TGCATTGGGACATTTGATGTTACA 59.474 37.500 0.00 0.00 45.03 2.41
3236 3401 5.070770 TGCATTGGGACATTTGATGTTAC 57.929 39.130 0.00 0.00 45.03 2.50
3237 3402 5.735285 TTGCATTGGGACATTTGATGTTA 57.265 34.783 0.00 0.00 45.03 2.41
3238 3403 4.620589 TTGCATTGGGACATTTGATGTT 57.379 36.364 0.00 0.00 45.03 2.71
3240 3405 6.517605 TCATATTGCATTGGGACATTTGATG 58.482 36.000 0.00 0.00 39.30 3.07
3241 3406 6.325545 ACTCATATTGCATTGGGACATTTGAT 59.674 34.615 0.00 0.00 39.30 2.57
3242 3407 5.657745 ACTCATATTGCATTGGGACATTTGA 59.342 36.000 0.00 0.00 39.30 2.69
3243 3408 5.909477 ACTCATATTGCATTGGGACATTTG 58.091 37.500 0.00 0.00 39.30 2.32
3244 3409 5.895534 AGACTCATATTGCATTGGGACATTT 59.104 36.000 0.00 0.00 39.30 2.32
3245 3410 5.452255 AGACTCATATTGCATTGGGACATT 58.548 37.500 0.00 0.00 39.30 2.71
3246 3411 5.057843 AGACTCATATTGCATTGGGACAT 57.942 39.130 0.00 0.00 39.30 3.06
3247 3412 4.508551 AGACTCATATTGCATTGGGACA 57.491 40.909 0.00 0.00 0.00 4.02
3248 3413 7.119846 GGTTATAGACTCATATTGCATTGGGAC 59.880 40.741 0.00 0.00 0.00 4.46
3249 3414 7.017551 AGGTTATAGACTCATATTGCATTGGGA 59.982 37.037 0.00 0.00 0.00 4.37
3250 3415 7.170965 AGGTTATAGACTCATATTGCATTGGG 58.829 38.462 0.00 0.00 0.00 4.12
3251 3416 9.725019 TTAGGTTATAGACTCATATTGCATTGG 57.275 33.333 0.00 0.00 0.00 3.16
3269 3434 9.754382 CATGCAAAGCTTCATTTATTAGGTTAT 57.246 29.630 0.00 0.00 0.00 1.89
3270 3435 8.748412 ACATGCAAAGCTTCATTTATTAGGTTA 58.252 29.630 0.00 0.00 0.00 2.85
3271 3436 7.614494 ACATGCAAAGCTTCATTTATTAGGTT 58.386 30.769 0.00 0.00 0.00 3.50
3272 3437 7.174107 ACATGCAAAGCTTCATTTATTAGGT 57.826 32.000 0.00 0.00 0.00 3.08
3273 3438 9.754382 ATAACATGCAAAGCTTCATTTATTAGG 57.246 29.630 0.00 0.00 0.00 2.69
3276 3441 9.090692 GTGATAACATGCAAAGCTTCATTTATT 57.909 29.630 0.00 0.00 0.00 1.40
3277 3442 8.252417 TGTGATAACATGCAAAGCTTCATTTAT 58.748 29.630 0.00 7.19 0.00 1.40
3278 3443 7.541783 GTGTGATAACATGCAAAGCTTCATTTA 59.458 33.333 0.00 3.06 0.00 1.40
3279 3444 6.366877 GTGTGATAACATGCAAAGCTTCATTT 59.633 34.615 0.00 1.04 0.00 2.32
3280 3445 5.865552 GTGTGATAACATGCAAAGCTTCATT 59.134 36.000 0.00 0.00 0.00 2.57
3281 3446 5.184479 AGTGTGATAACATGCAAAGCTTCAT 59.816 36.000 0.00 0.00 0.00 2.57
3282 3447 4.520111 AGTGTGATAACATGCAAAGCTTCA 59.480 37.500 0.00 0.00 0.00 3.02
3283 3448 5.051891 AGTGTGATAACATGCAAAGCTTC 57.948 39.130 0.00 0.00 0.00 3.86
3284 3449 5.458041 AAGTGTGATAACATGCAAAGCTT 57.542 34.783 0.00 0.00 0.00 3.74
3285 3450 6.151648 ACATAAGTGTGATAACATGCAAAGCT 59.848 34.615 0.00 0.00 37.14 3.74
3286 3451 6.324819 ACATAAGTGTGATAACATGCAAAGC 58.675 36.000 0.00 0.00 37.14 3.51
3287 3452 9.277565 GTAACATAAGTGTGATAACATGCAAAG 57.722 33.333 0.00 0.00 38.92 2.77
3288 3453 9.008965 AGTAACATAAGTGTGATAACATGCAAA 57.991 29.630 0.00 0.00 38.92 3.68
3289 3454 8.560355 AGTAACATAAGTGTGATAACATGCAA 57.440 30.769 0.00 0.00 38.92 4.08
3290 3455 9.093970 GTAGTAACATAAGTGTGATAACATGCA 57.906 33.333 0.00 0.00 38.92 3.96
3291 3456 8.548721 GGTAGTAACATAAGTGTGATAACATGC 58.451 37.037 0.00 0.00 38.92 4.06
3292 3457 9.042008 GGGTAGTAACATAAGTGTGATAACATG 57.958 37.037 0.00 0.00 38.92 3.21
3293 3458 8.764558 TGGGTAGTAACATAAGTGTGATAACAT 58.235 33.333 0.00 0.00 38.92 2.71
3294 3459 8.036575 GTGGGTAGTAACATAAGTGTGATAACA 58.963 37.037 0.00 0.00 38.92 2.41
3295 3460 8.255905 AGTGGGTAGTAACATAAGTGTGATAAC 58.744 37.037 0.00 0.00 38.92 1.89
3296 3461 8.370266 AGTGGGTAGTAACATAAGTGTGATAA 57.630 34.615 0.00 0.00 38.92 1.75
3297 3462 7.966339 AGTGGGTAGTAACATAAGTGTGATA 57.034 36.000 0.00 0.00 38.92 2.15
3298 3463 6.869206 AGTGGGTAGTAACATAAGTGTGAT 57.131 37.500 0.00 0.00 38.92 3.06
3299 3464 7.966339 ATAGTGGGTAGTAACATAAGTGTGA 57.034 36.000 0.00 0.00 38.92 3.58
3300 3465 8.255206 TCAATAGTGGGTAGTAACATAAGTGTG 58.745 37.037 0.00 0.00 38.92 3.82
3301 3466 8.370266 TCAATAGTGGGTAGTAACATAAGTGT 57.630 34.615 0.00 0.00 41.28 3.55
3302 3467 7.926555 CCTCAATAGTGGGTAGTAACATAAGTG 59.073 40.741 0.00 0.00 0.00 3.16
3303 3468 7.622479 ACCTCAATAGTGGGTAGTAACATAAGT 59.378 37.037 2.07 0.00 32.64 2.24
3304 3469 8.019656 ACCTCAATAGTGGGTAGTAACATAAG 57.980 38.462 2.07 0.00 32.64 1.73
3305 3470 7.983166 ACCTCAATAGTGGGTAGTAACATAA 57.017 36.000 2.07 0.00 32.64 1.90
3306 3471 8.701908 CTACCTCAATAGTGGGTAGTAACATA 57.298 38.462 20.63 0.31 40.39 2.29
3307 3472 7.598759 CTACCTCAATAGTGGGTAGTAACAT 57.401 40.000 20.63 0.00 40.39 2.71
3313 3478 7.598759 ATGTTACTACCTCAATAGTGGGTAG 57.401 40.000 24.28 24.28 45.24 3.18
3314 3479 8.284435 ACTATGTTACTACCTCAATAGTGGGTA 58.716 37.037 9.29 9.29 36.09 3.69
3315 3480 7.130775 ACTATGTTACTACCTCAATAGTGGGT 58.869 38.462 8.14 8.14 36.09 4.51
3316 3481 7.506261 AGACTATGTTACTACCTCAATAGTGGG 59.494 40.741 0.00 0.00 36.09 4.61
3317 3482 8.466617 AGACTATGTTACTACCTCAATAGTGG 57.533 38.462 0.00 0.00 36.09 4.00
3322 3487 9.884814 ATCCTTAGACTATGTTACTACCTCAAT 57.115 33.333 0.00 0.00 0.00 2.57
3354 3519 9.910267 TGGAGAGTAACATACACTAGTAACATA 57.090 33.333 0.00 0.00 33.13 2.29
3355 3520 8.684520 GTGGAGAGTAACATACACTAGTAACAT 58.315 37.037 0.00 0.00 33.13 2.71
3356 3521 7.886970 AGTGGAGAGTAACATACACTAGTAACA 59.113 37.037 0.00 0.00 37.41 2.41
3357 3522 8.182881 CAGTGGAGAGTAACATACACTAGTAAC 58.817 40.741 0.00 0.00 37.09 2.50
3358 3523 7.886970 ACAGTGGAGAGTAACATACACTAGTAA 59.113 37.037 0.00 0.00 37.09 2.24
3359 3524 7.336176 CACAGTGGAGAGTAACATACACTAGTA 59.664 40.741 0.00 0.00 37.09 1.82
3360 3525 6.151312 CACAGTGGAGAGTAACATACACTAGT 59.849 42.308 0.00 0.00 37.09 2.57
3361 3526 6.404844 CCACAGTGGAGAGTAACATACACTAG 60.405 46.154 15.35 0.00 40.96 2.57
3362 3527 5.417894 CCACAGTGGAGAGTAACATACACTA 59.582 44.000 15.35 0.00 40.96 2.74
3363 3528 4.220821 CCACAGTGGAGAGTAACATACACT 59.779 45.833 15.35 0.00 40.96 3.55
3364 3529 4.495422 CCACAGTGGAGAGTAACATACAC 58.505 47.826 15.35 0.00 40.96 2.90
3365 3530 3.056107 GCCACAGTGGAGAGTAACATACA 60.056 47.826 24.96 0.00 40.96 2.29
3366 3531 3.195825 AGCCACAGTGGAGAGTAACATAC 59.804 47.826 24.96 0.33 40.96 2.39
3367 3532 3.441101 AGCCACAGTGGAGAGTAACATA 58.559 45.455 24.96 0.00 40.96 2.29
3368 3533 2.260822 AGCCACAGTGGAGAGTAACAT 58.739 47.619 24.96 0.00 40.96 2.71
3369 3534 1.717032 AGCCACAGTGGAGAGTAACA 58.283 50.000 24.96 0.00 40.96 2.41
3370 3535 2.826725 ACTAGCCACAGTGGAGAGTAAC 59.173 50.000 24.96 3.24 40.96 2.50
3371 3536 3.090037 GACTAGCCACAGTGGAGAGTAA 58.910 50.000 24.96 0.06 40.96 2.24
3372 3537 2.309162 AGACTAGCCACAGTGGAGAGTA 59.691 50.000 24.96 7.42 40.96 2.59
3373 3538 1.076350 AGACTAGCCACAGTGGAGAGT 59.924 52.381 24.96 22.80 40.96 3.24
3374 3539 1.846007 AGACTAGCCACAGTGGAGAG 58.154 55.000 24.96 19.82 40.96 3.20
3375 3540 2.310779 AAGACTAGCCACAGTGGAGA 57.689 50.000 24.96 8.72 40.96 3.71
3376 3541 6.412362 AATATAAGACTAGCCACAGTGGAG 57.588 41.667 24.96 14.95 40.96 3.86
3377 3542 6.808321 AAATATAAGACTAGCCACAGTGGA 57.192 37.500 24.96 1.80 40.96 4.02
3378 3543 7.865706 AAAAATATAAGACTAGCCACAGTGG 57.134 36.000 16.16 16.16 41.55 4.00
3400 3565 3.071312 TGTTAGCACTCCCTCCGTAAAAA 59.929 43.478 0.00 0.00 0.00 1.94
3407 3572 2.111384 TCTCATGTTAGCACTCCCTCC 58.889 52.381 0.00 0.00 0.00 4.30
3416 3581 0.917259 CTGTCGCGTCTCATGTTAGC 59.083 55.000 5.77 0.00 0.00 3.09
3420 3585 1.213013 GGACTGTCGCGTCTCATGT 59.787 57.895 5.77 5.04 34.38 3.21
3479 3645 8.178313 CAGTCTATTGAGTTTTAGGCTTTTAGC 58.822 37.037 0.00 0.00 41.46 3.09
3480 3646 9.436957 TCAGTCTATTGAGTTTTAGGCTTTTAG 57.563 33.333 0.00 0.00 28.04 1.85
3481 3647 9.436957 CTCAGTCTATTGAGTTTTAGGCTTTTA 57.563 33.333 0.00 0.00 39.76 1.52
3482 3648 8.157476 TCTCAGTCTATTGAGTTTTAGGCTTTT 58.843 33.333 0.00 0.00 43.96 2.27
3483 3649 7.680730 TCTCAGTCTATTGAGTTTTAGGCTTT 58.319 34.615 0.00 0.00 43.96 3.51
3530 3696 3.737266 CGTGCAAAAATCAACAGCTGAAT 59.263 39.130 23.35 7.95 37.67 2.57
3568 3734 4.070716 GAGGTCCATTGGATGATGCTTAG 58.929 47.826 9.01 0.00 32.73 2.18
3612 3778 5.218885 CAACCGATAGAAAAACATGTTGCA 58.781 37.500 12.82 0.00 39.76 4.08
3619 3785 2.881513 TGCTGCAACCGATAGAAAAACA 59.118 40.909 0.00 0.00 39.76 2.83
3622 3788 2.682856 GGATGCTGCAACCGATAGAAAA 59.317 45.455 13.37 0.00 39.76 2.29
3634 3800 3.189921 GCAATGACGGATGCTGCA 58.810 55.556 4.13 4.13 39.46 4.41
3667 3833 1.000955 AGATGTTGTGACCGGTGAGAC 59.999 52.381 14.63 6.13 0.00 3.36
3694 3860 0.428618 GACAACGTGCTACGAACGAC 59.571 55.000 14.18 1.51 46.05 4.34
3708 3874 0.028902 GTTGCAACCGGTGAGACAAC 59.971 55.000 19.15 16.41 0.00 3.32
3710 3876 0.179032 ATGTTGCAACCGGTGAGACA 60.179 50.000 26.14 11.85 0.00 3.41
3722 3888 3.004326 GCCAATGGCGGATGTTGCA 62.004 57.895 9.14 0.00 39.62 4.08
3733 3899 3.799281 AAATGATACAACCGCCAATGG 57.201 42.857 0.00 0.00 0.00 3.16
3739 3905 4.095610 GTGCAACTAAATGATACAACCGC 58.904 43.478 0.00 0.00 0.00 5.68
3740 3906 5.289917 TGTGCAACTAAATGATACAACCG 57.710 39.130 0.00 0.00 38.04 4.44
3763 3929 1.732941 TGACAAGTGACGTTGCAAGT 58.267 45.000 0.00 0.00 0.00 3.16
3853 4019 3.004862 TCGAGTGACATCAGCGTAGTTA 58.995 45.455 4.58 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.