Multiple sequence alignment - TraesCS4B01G236300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G236300 chr4B 100.000 3473 0 0 1 3473 494224195 494220723 0.000000e+00 6414.0
1 TraesCS4B01G236300 chr4B 96.078 408 14 2 39 444 16956500 16956907 0.000000e+00 664.0
2 TraesCS4B01G236300 chr4D 89.922 2044 139 29 938 2945 399959041 399957029 0.000000e+00 2571.0
3 TraesCS4B01G236300 chr4D 94.000 50 2 1 4 52 399959087 399959038 1.340000e-09 75.0
4 TraesCS4B01G236300 chr4A 89.355 1503 118 21 1473 2935 58111431 58109931 0.000000e+00 1851.0
5 TraesCS4B01G236300 chr4A 92.500 480 27 4 938 1416 58111925 58111454 0.000000e+00 678.0
6 TraesCS4B01G236300 chr4A 86.878 221 25 2 2251 2467 58107378 58107158 9.630000e-61 244.0
7 TraesCS4B01G236300 chr4A 95.918 49 2 0 4 52 58111970 58111922 2.870000e-11 80.5
8 TraesCS4B01G236300 chr7B 96.208 501 17 2 443 941 214224964 214225464 0.000000e+00 819.0
9 TraesCS4B01G236300 chr7B 95.808 501 18 3 443 941 472168671 472168172 0.000000e+00 806.0
10 TraesCS4B01G236300 chr2B 96.569 408 12 2 39 444 640952656 640953063 0.000000e+00 675.0
11 TraesCS4B01G236300 chr2B 96.324 408 13 2 39 444 469747744 469747337 0.000000e+00 669.0
12 TraesCS4B01G236300 chr2B 96.078 408 14 2 39 444 192670104 192669697 0.000000e+00 664.0
13 TraesCS4B01G236300 chr2B 90.711 506 20 12 462 941 497594495 497593991 0.000000e+00 649.0
14 TraesCS4B01G236300 chr6B 96.078 408 14 2 39 444 38641914 38642321 0.000000e+00 664.0
15 TraesCS4B01G236300 chr6B 90.514 506 21 5 462 941 38642172 38642676 0.000000e+00 643.0
16 TraesCS4B01G236300 chr5B 96.078 408 14 2 39 444 568348513 568348920 0.000000e+00 664.0
17 TraesCS4B01G236300 chr5B 91.107 506 18 5 462 941 568348771 568349275 0.000000e+00 660.0
18 TraesCS4B01G236300 chr5B 90.927 507 18 6 462 941 568664223 568664728 0.000000e+00 656.0
19 TraesCS4B01G236300 chr5B 90.711 506 19 12 462 941 90868668 90868165 0.000000e+00 649.0
20 TraesCS4B01G236300 chr5B 90.335 507 21 6 462 941 472459114 472458609 1.050000e-179 640.0
21 TraesCS4B01G236300 chr5B 90.119 506 22 13 462 941 386441137 386440634 1.760000e-177 632.0
22 TraesCS4B01G236300 chr3B 96.078 408 14 2 39 444 148754912 148754505 0.000000e+00 664.0
23 TraesCS4B01G236300 chr3B 90.945 508 18 7 462 943 148754654 148754149 0.000000e+00 658.0
24 TraesCS4B01G236300 chr3B 90.909 506 18 12 462 941 18599214 18599717 0.000000e+00 654.0
25 TraesCS4B01G236300 chr3B 90.040 502 22 6 462 937 674179810 674179311 2.940000e-175 625.0
26 TraesCS4B01G236300 chr1B 96.078 408 14 2 39 444 591724712 591724305 0.000000e+00 664.0
27 TraesCS4B01G236300 chr1B 95.833 408 15 2 39 444 584217286 584216879 0.000000e+00 658.0
28 TraesCS4B01G236300 chr1B 90.909 506 18 5 462 941 89791655 89792158 0.000000e+00 654.0
29 TraesCS4B01G236300 chr1B 90.711 506 20 8 462 941 308982942 308982438 0.000000e+00 649.0
30 TraesCS4B01G236300 chr1B 90.711 506 20 12 462 941 353043890 353044394 0.000000e+00 649.0
31 TraesCS4B01G236300 chr1B 90.265 452 16 11 516 941 96939451 96939002 1.810000e-157 566.0
32 TraesCS4B01G236300 chr3A 93.750 64 4 0 2953 3016 706404927 706404990 2.850000e-16 97.1
33 TraesCS4B01G236300 chr7A 87.671 73 7 1 2953 3025 418671092 418671022 2.220000e-12 84.2
34 TraesCS4B01G236300 chr2D 96.970 33 1 0 2669 2701 106362844 106362876 4.840000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G236300 chr4B 494220723 494224195 3472 True 6414.000 6414 100.00000 1 3473 1 chr4B.!!$R1 3472
1 TraesCS4B01G236300 chr4D 399957029 399959087 2058 True 1323.000 2571 91.96100 4 2945 2 chr4D.!!$R1 2941
2 TraesCS4B01G236300 chr4A 58107158 58111970 4812 True 713.375 1851 91.16275 4 2935 4 chr4A.!!$R1 2931
3 TraesCS4B01G236300 chr7B 214224964 214225464 500 False 819.000 819 96.20800 443 941 1 chr7B.!!$F1 498
4 TraesCS4B01G236300 chr2B 497593991 497594495 504 True 649.000 649 90.71100 462 941 1 chr2B.!!$R3 479
5 TraesCS4B01G236300 chr6B 38641914 38642676 762 False 653.500 664 93.29600 39 941 2 chr6B.!!$F1 902
6 TraesCS4B01G236300 chr5B 568348513 568349275 762 False 662.000 664 93.59250 39 941 2 chr5B.!!$F2 902
7 TraesCS4B01G236300 chr5B 568664223 568664728 505 False 656.000 656 90.92700 462 941 1 chr5B.!!$F1 479
8 TraesCS4B01G236300 chr5B 90868165 90868668 503 True 649.000 649 90.71100 462 941 1 chr5B.!!$R1 479
9 TraesCS4B01G236300 chr5B 472458609 472459114 505 True 640.000 640 90.33500 462 941 1 chr5B.!!$R3 479
10 TraesCS4B01G236300 chr5B 386440634 386441137 503 True 632.000 632 90.11900 462 941 1 chr5B.!!$R2 479
11 TraesCS4B01G236300 chr3B 148754149 148754912 763 True 661.000 664 93.51150 39 943 2 chr3B.!!$R2 904
12 TraesCS4B01G236300 chr3B 18599214 18599717 503 False 654.000 654 90.90900 462 941 1 chr3B.!!$F1 479
13 TraesCS4B01G236300 chr1B 89791655 89792158 503 False 654.000 654 90.90900 462 941 1 chr1B.!!$F1 479
14 TraesCS4B01G236300 chr1B 308982438 308982942 504 True 649.000 649 90.71100 462 941 1 chr1B.!!$R2 479
15 TraesCS4B01G236300 chr1B 353043890 353044394 504 False 649.000 649 90.71100 462 941 1 chr1B.!!$F2 479

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
971 1005 0.038892 CTGTTGTTGGTGGCTCATGC 60.039 55.0 0.00 0.0 38.76 4.06 F
2398 2439 0.179111 GATCGATGCAGGTTCCGTCA 60.179 55.0 0.54 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2413 2454 0.102481 AGGCCTTCGTGCACTATACG 59.898 55.0 16.19 0.55 42.56 3.06 R
3289 5745 0.040157 CCGGTGATGTTGCAACAGTG 60.040 55.0 33.44 20.81 43.04 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
133 135 6.725364 ACATGTGGAGTTTTCTGGATTCTAT 58.275 36.000 0.00 0.00 0.00 1.98
147 149 6.608405 TCTGGATTCTATCATGTGGCAAAATT 59.392 34.615 0.00 0.00 0.00 1.82
200 202 7.558444 TGATTAACTTAGGTGAGTGTTTGGTTT 59.442 33.333 0.00 0.00 0.00 3.27
204 206 6.420638 ACTTAGGTGAGTGTTTGGTTTAAGT 58.579 36.000 0.00 0.00 0.00 2.24
246 248 0.107214 AAGGCCCCACATGACATACG 60.107 55.000 0.00 0.00 0.00 3.06
400 403 1.954362 TTGCCACACTTTGCCACACC 61.954 55.000 0.00 0.00 0.00 4.16
401 404 2.127232 GCCACACTTTGCCACACCT 61.127 57.895 0.00 0.00 0.00 4.00
402 405 0.821711 GCCACACTTTGCCACACCTA 60.822 55.000 0.00 0.00 0.00 3.08
403 406 1.686355 CCACACTTTGCCACACCTAA 58.314 50.000 0.00 0.00 0.00 2.69
404 407 2.238521 CCACACTTTGCCACACCTAAT 58.761 47.619 0.00 0.00 0.00 1.73
405 408 2.228822 CCACACTTTGCCACACCTAATC 59.771 50.000 0.00 0.00 0.00 1.75
406 409 3.149196 CACACTTTGCCACACCTAATCT 58.851 45.455 0.00 0.00 0.00 2.40
407 410 3.569701 CACACTTTGCCACACCTAATCTT 59.430 43.478 0.00 0.00 0.00 2.40
408 411 4.759693 CACACTTTGCCACACCTAATCTTA 59.240 41.667 0.00 0.00 0.00 2.10
409 412 5.003804 ACACTTTGCCACACCTAATCTTAG 58.996 41.667 0.00 0.00 0.00 2.18
421 424 5.819825 CCTAATCTTAGGCAAGTTTGACC 57.180 43.478 3.14 0.00 43.43 4.02
422 425 5.253330 CCTAATCTTAGGCAAGTTTGACCA 58.747 41.667 3.14 0.00 43.43 4.02
423 426 5.710099 CCTAATCTTAGGCAAGTTTGACCAA 59.290 40.000 3.14 0.00 43.43 3.67
424 427 6.208599 CCTAATCTTAGGCAAGTTTGACCAAA 59.791 38.462 3.14 0.00 43.43 3.28
425 428 6.670695 AATCTTAGGCAAGTTTGACCAAAT 57.329 33.333 0.00 0.00 36.67 2.32
426 429 6.670695 ATCTTAGGCAAGTTTGACCAAATT 57.329 33.333 0.00 0.00 36.67 1.82
427 430 7.775053 ATCTTAGGCAAGTTTGACCAAATTA 57.225 32.000 0.00 0.00 36.67 1.40
428 431 7.214467 TCTTAGGCAAGTTTGACCAAATTAG 57.786 36.000 0.00 0.00 36.67 1.73
429 432 4.871933 AGGCAAGTTTGACCAAATTAGG 57.128 40.909 0.00 0.00 36.67 2.69
430 433 4.223144 AGGCAAGTTTGACCAAATTAGGT 58.777 39.130 0.00 0.00 46.82 3.08
431 434 5.390387 AGGCAAGTTTGACCAAATTAGGTA 58.610 37.500 0.00 0.00 43.38 3.08
432 435 5.476945 AGGCAAGTTTGACCAAATTAGGTAG 59.523 40.000 0.00 0.00 43.38 3.18
433 436 5.336451 GGCAAGTTTGACCAAATTAGGTAGG 60.336 44.000 0.00 0.00 43.38 3.18
434 437 5.243060 GCAAGTTTGACCAAATTAGGTAGGT 59.757 40.000 0.00 0.00 43.38 3.08
435 438 6.677913 CAAGTTTGACCAAATTAGGTAGGTG 58.322 40.000 0.00 0.00 43.38 4.00
436 439 5.948842 AGTTTGACCAAATTAGGTAGGTGT 58.051 37.500 0.00 0.00 43.38 4.16
437 440 6.370453 AGTTTGACCAAATTAGGTAGGTGTT 58.630 36.000 0.00 0.00 43.38 3.32
438 441 6.837048 AGTTTGACCAAATTAGGTAGGTGTTT 59.163 34.615 0.00 0.00 43.38 2.83
439 442 6.642707 TTGACCAAATTAGGTAGGTGTTTG 57.357 37.500 0.00 0.00 43.38 2.93
599 604 4.394729 CAAGTTTGGCCAAGTTAGGTAGA 58.605 43.478 19.48 0.00 0.00 2.59
623 628 4.139038 GTTTGGTTCTAGCCACACCTAAA 58.861 43.478 0.00 0.00 38.42 1.85
634 641 3.614870 GCCACACCTAAAGCAAGGATTTG 60.615 47.826 6.77 0.00 39.15 2.32
639 648 6.538381 CACACCTAAAGCAAGGATTTGTTTTT 59.462 34.615 6.77 3.45 42.66 1.94
702 711 2.947695 GCAAGATTCCCTTAGGCAAGCT 60.948 50.000 0.00 0.00 32.86 3.74
780 812 3.898741 GTGGAATCCAAACAACCCCTAAA 59.101 43.478 2.31 0.00 34.18 1.85
865 897 2.017049 GTAGTGCTCGGATTTGCCATT 58.983 47.619 0.00 0.00 35.94 3.16
869 901 3.509575 AGTGCTCGGATTTGCCATTTTTA 59.490 39.130 0.00 0.00 35.94 1.52
950 984 2.612221 GGGTATAGAATACAGCACCGCC 60.612 54.545 0.00 0.00 0.00 6.13
951 985 2.612221 GGTATAGAATACAGCACCGCCC 60.612 54.545 0.00 0.00 0.00 6.13
971 1005 0.038892 CTGTTGTTGGTGGCTCATGC 60.039 55.000 0.00 0.00 38.76 4.06
1008 1042 5.278169 GCAAAATATCGCTCACATGGATCTT 60.278 40.000 0.00 0.00 0.00 2.40
1397 1431 1.605058 CCTCCCAACCACTCGATCGT 61.605 60.000 15.94 0.00 0.00 3.73
1400 1434 1.076332 CCCAACCACTCGATCGTTTC 58.924 55.000 15.94 0.00 0.00 2.78
1401 1435 1.606994 CCCAACCACTCGATCGTTTCA 60.607 52.381 15.94 0.00 0.00 2.69
1417 1458 2.732412 TTCAGTCTCTGCTTTCCTCG 57.268 50.000 0.00 0.00 0.00 4.63
1429 1470 0.748450 TTTCCTCGTCGTCCACAAGT 59.252 50.000 0.00 0.00 0.00 3.16
1430 1471 0.313043 TTCCTCGTCGTCCACAAGTC 59.687 55.000 0.00 0.00 0.00 3.01
1431 1472 0.536687 TCCTCGTCGTCCACAAGTCT 60.537 55.000 0.00 0.00 0.00 3.24
1432 1473 0.387367 CCTCGTCGTCCACAAGTCTG 60.387 60.000 0.00 0.00 0.00 3.51
1433 1474 0.591659 CTCGTCGTCCACAAGTCTGA 59.408 55.000 0.00 0.00 0.00 3.27
1434 1475 1.001706 CTCGTCGTCCACAAGTCTGAA 60.002 52.381 0.00 0.00 0.00 3.02
1435 1476 1.611977 TCGTCGTCCACAAGTCTGAAT 59.388 47.619 0.00 0.00 0.00 2.57
1438 1479 2.476619 GTCGTCCACAAGTCTGAATGTG 59.523 50.000 14.59 14.59 45.06 3.21
1443 1484 5.237815 GTCCACAAGTCTGAATGTGTGATA 58.762 41.667 18.10 7.31 44.21 2.15
1448 1489 5.698089 ACAAGTCTGAATGTGTGATACAGTG 59.302 40.000 0.00 0.00 43.80 3.66
1451 1492 6.291377 AGTCTGAATGTGTGATACAGTGTTT 58.709 36.000 0.00 0.00 43.80 2.83
1457 1498 4.518249 TGTGTGATACAGTGTTTTGGTGA 58.482 39.130 0.00 0.00 33.42 4.02
1459 1500 3.558006 TGTGATACAGTGTTTTGGTGACG 59.442 43.478 0.00 0.00 0.00 4.35
1461 1502 4.451096 GTGATACAGTGTTTTGGTGACGAT 59.549 41.667 0.00 0.00 0.00 3.73
1465 1506 2.224079 CAGTGTTTTGGTGACGATCTGG 59.776 50.000 0.00 0.00 0.00 3.86
1470 1511 0.955428 TTGGTGACGATCTGGCTTGC 60.955 55.000 0.00 0.00 0.00 4.01
1491 1532 2.923035 ACTGACAGGTGGGACCCG 60.923 66.667 5.91 0.00 39.75 5.28
1629 1670 3.044114 CTTCGACGAGTTCACGCGC 62.044 63.158 5.73 0.00 42.87 6.86
1665 1706 2.915659 TCGCTCAACCAGGGACGT 60.916 61.111 0.00 0.00 39.13 4.34
1955 1996 4.870190 GGTGGTGACCAAGAACGT 57.130 55.556 5.57 0.00 42.59 3.99
1965 2006 1.406539 ACCAAGAACGTGACGTACACT 59.593 47.619 12.37 8.78 46.24 3.55
1980 2021 3.125146 CGTACACTGCACACAATATTGCT 59.875 43.478 15.48 0.27 39.62 3.91
2139 2180 2.125793 GTGTACGGGGAAGACGGC 60.126 66.667 0.00 0.00 35.23 5.68
2150 2191 2.513259 AAGACGGCTTCACGGGGAA 61.513 57.895 0.00 0.00 38.39 3.97
2227 2268 2.656002 CCATCGAGAAGGAGTGGTCTA 58.344 52.381 0.00 0.00 0.00 2.59
2229 2270 1.752683 TCGAGAAGGAGTGGTCTAGC 58.247 55.000 0.00 0.00 0.00 3.42
2265 2306 1.352622 TGAAGGTGGTCAGGTTGCCT 61.353 55.000 0.00 0.00 0.00 4.75
2296 2337 2.032030 CACGATGGCTTCTTCAACGTTT 60.032 45.455 0.00 0.00 40.62 3.60
2360 2401 5.277250 TGGTGGAACTATAGAACTCCATCA 58.723 41.667 21.86 21.86 44.87 3.07
2398 2439 0.179111 GATCGATGCAGGTTCCGTCA 60.179 55.000 0.54 0.00 0.00 4.35
2417 2458 3.814283 GTCAGGACGGAAGATAGACGTAT 59.186 47.826 0.00 0.00 41.40 3.06
2483 2524 3.991121 GAGGTGCTCTGAGTTTGAGTAAC 59.009 47.826 6.53 0.00 34.74 2.50
2491 2532 7.868922 TGCTCTGAGTTTGAGTAACGTTAATAA 59.131 33.333 10.11 0.00 41.78 1.40
2529 2573 4.764679 TTGAAAACGAACCAGGATCATG 57.235 40.909 0.00 0.00 0.00 3.07
2541 2585 5.874093 ACCAGGATCATGATTTCATAGACC 58.126 41.667 10.14 3.69 34.26 3.85
2552 2596 8.499162 CATGATTTCATAGACCTCGGATAAAAC 58.501 37.037 0.00 0.00 34.26 2.43
2555 2599 9.110502 GATTTCATAGACCTCGGATAAAACTTT 57.889 33.333 0.00 0.00 0.00 2.66
2574 2619 8.856490 AAACTTTCAAATGATAAGTGTCACAC 57.144 30.769 0.00 0.00 32.76 3.82
2576 2621 6.260050 ACTTTCAAATGATAAGTGTCACACGT 59.740 34.615 1.22 1.06 39.64 4.49
2577 2622 7.439955 ACTTTCAAATGATAAGTGTCACACGTA 59.560 33.333 6.02 6.02 39.64 3.57
2579 2632 8.989653 TTCAAATGATAAGTGTCACACGTATA 57.010 30.769 15.37 5.17 38.65 1.47
2598 2651 1.595382 GCACGAAGCACACCAGTCT 60.595 57.895 0.00 0.00 44.79 3.24
2614 2667 3.359654 CAGTCTTGGCGTTTTGTACAAC 58.640 45.455 8.07 0.00 0.00 3.32
2684 2760 1.377202 GGAAGTTGCCATCCTCGCA 60.377 57.895 0.00 0.00 32.75 5.10
2686 2762 0.379669 GAAGTTGCCATCCTCGCATG 59.620 55.000 0.00 0.00 35.83 4.06
2706 2782 8.015087 TCGCATGACTAAACTTGACATAAAAAG 58.985 33.333 0.00 0.00 0.00 2.27
2707 2783 7.201266 CGCATGACTAAACTTGACATAAAAAGC 60.201 37.037 0.00 0.00 0.00 3.51
2716 2792 5.458779 ACTTGACATAAAAAGCGTTTGAAGC 59.541 36.000 0.00 0.00 0.00 3.86
2737 2813 0.098728 GCCATATGTTCGTGCCACAC 59.901 55.000 1.24 0.00 0.00 3.82
2738 2814 1.737838 CCATATGTTCGTGCCACACT 58.262 50.000 1.24 0.00 31.34 3.55
2755 2831 3.758023 CACACTTGTGGCATTTATCAGGA 59.242 43.478 5.72 0.00 42.10 3.86
2769 2853 2.054232 TCAGGATCCTAGGACGTGAC 57.946 55.000 15.42 2.73 0.00 3.67
2774 2858 3.394940 AGGATCCTAGGACGTGACTATCA 59.605 47.826 15.42 0.00 0.00 2.15
2775 2859 3.502979 GGATCCTAGGACGTGACTATCAC 59.497 52.174 15.42 0.00 43.65 3.06
2790 2874 5.753438 TGACTATCACGCTGACATTTAATCC 59.247 40.000 0.00 0.00 0.00 3.01
2792 2876 6.291377 ACTATCACGCTGACATTTAATCCAT 58.709 36.000 0.00 0.00 0.00 3.41
2799 2883 5.525012 CGCTGACATTTAATCCATGAGAGAA 59.475 40.000 0.00 0.00 0.00 2.87
2804 2888 6.897986 ACATTTAATCCATGAGAGAAGAGCT 58.102 36.000 0.00 0.00 0.00 4.09
2808 2892 5.946942 AATCCATGAGAGAAGAGCTAACA 57.053 39.130 0.00 0.00 0.00 2.41
2812 2897 5.247110 TCCATGAGAGAAGAGCTAACAAACT 59.753 40.000 0.00 0.00 0.00 2.66
2813 2898 5.350914 CCATGAGAGAAGAGCTAACAAACTG 59.649 44.000 0.00 0.00 0.00 3.16
2841 2927 0.896226 GCTACGAGACTCCCCTGTTT 59.104 55.000 0.00 0.00 0.00 2.83
2843 2929 2.289506 GCTACGAGACTCCCCTGTTTTT 60.290 50.000 0.00 0.00 0.00 1.94
2864 2953 1.613520 GGCCCCAAAACTACTCCTGAC 60.614 57.143 0.00 0.00 0.00 3.51
2884 2973 9.621239 TCCTGACTCTCCCAATAAATATAGAAT 57.379 33.333 0.00 0.00 0.00 2.40
2926 3017 2.034812 GCACCGGACCAATAAAAACACA 59.965 45.455 9.46 0.00 0.00 3.72
2930 3021 3.305064 CCGGACCAATAAAAACACACCTG 60.305 47.826 0.00 0.00 0.00 4.00
2935 3026 6.989759 GGACCAATAAAAACACACCTGAAAAT 59.010 34.615 0.00 0.00 0.00 1.82
2936 3027 7.042119 GGACCAATAAAAACACACCTGAAAATG 60.042 37.037 0.00 0.00 0.00 2.32
2938 3029 8.043710 ACCAATAAAAACACACCTGAAAATGAA 58.956 29.630 0.00 0.00 0.00 2.57
2950 3041 9.369904 ACACCTGAAAATGAAAATATATGTTGC 57.630 29.630 0.00 0.00 0.00 4.17
2952 3043 9.590451 ACCTGAAAATGAAAATATATGTTGCAG 57.410 29.630 0.00 0.00 0.00 4.41
2953 3044 8.545420 CCTGAAAATGAAAATATATGTTGCAGC 58.455 33.333 0.00 0.00 0.00 5.25
2954 3045 9.309516 CTGAAAATGAAAATATATGTTGCAGCT 57.690 29.630 1.17 0.00 0.00 4.24
2955 3046 9.089601 TGAAAATGAAAATATATGTTGCAGCTG 57.910 29.630 10.11 10.11 0.00 4.24
2956 3047 7.473027 AAATGAAAATATATGTTGCAGCTGC 57.527 32.000 31.89 31.89 42.50 5.25
2957 3048 5.840243 TGAAAATATATGTTGCAGCTGCT 57.160 34.783 36.61 20.81 42.66 4.24
2958 3049 6.940831 TGAAAATATATGTTGCAGCTGCTA 57.059 33.333 36.61 28.48 42.66 3.49
2959 3050 6.962686 TGAAAATATATGTTGCAGCTGCTAG 58.037 36.000 36.61 1.70 42.66 3.42
2960 3051 5.954296 AAATATATGTTGCAGCTGCTAGG 57.046 39.130 36.61 1.26 42.66 3.02
2961 3052 1.602311 ATATGTTGCAGCTGCTAGGC 58.398 50.000 36.61 23.34 42.66 3.93
2962 3053 0.811219 TATGTTGCAGCTGCTAGGCG 60.811 55.000 36.61 0.00 42.66 5.52
2968 3059 4.247380 AGCTGCTAGGCGCCATCC 62.247 66.667 31.54 16.19 38.05 3.51
2970 3061 4.976925 CTGCTAGGCGCCATCCGG 62.977 72.222 31.54 16.60 38.05 5.14
2973 3064 2.047844 CTAGGCGCCATCCGGATG 60.048 66.667 33.52 33.52 38.51 3.51
2974 3065 4.314440 TAGGCGCCATCCGGATGC 62.314 66.667 34.77 27.49 37.49 3.91
2977 3068 3.730761 GCGCCATCCGGATGCATC 61.731 66.667 34.77 23.91 37.49 3.91
2978 3069 3.052082 CGCCATCCGGATGCATCC 61.052 66.667 34.77 32.34 43.65 3.51
2992 3083 2.368655 GCATCCAGCGGAAAAACATT 57.631 45.000 1.44 0.00 34.34 2.71
2993 3084 2.262211 GCATCCAGCGGAAAAACATTC 58.738 47.619 1.44 0.00 34.34 2.67
2994 3085 2.518949 CATCCAGCGGAAAAACATTCG 58.481 47.619 1.44 0.00 34.34 3.34
3000 3091 1.467342 GCGGAAAAACATTCGCCTAGT 59.533 47.619 0.00 0.00 42.02 2.57
3001 3092 2.475685 GCGGAAAAACATTCGCCTAGTC 60.476 50.000 0.00 0.00 42.02 2.59
3003 3094 3.181520 CGGAAAAACATTCGCCTAGTCAG 60.182 47.826 0.00 0.00 0.00 3.51
3004 3095 3.426292 GGAAAAACATTCGCCTAGTCAGC 60.426 47.826 0.00 0.00 0.00 4.26
3005 3096 1.739067 AAACATTCGCCTAGTCAGCC 58.261 50.000 0.00 0.00 0.00 4.85
3007 3098 0.833287 ACATTCGCCTAGTCAGCCAT 59.167 50.000 0.00 0.00 0.00 4.40
3009 3100 1.600957 CATTCGCCTAGTCAGCCATTG 59.399 52.381 0.00 0.00 0.00 2.82
3011 3102 0.975556 TCGCCTAGTCAGCCATTGGA 60.976 55.000 6.95 0.00 0.00 3.53
3013 3104 1.602311 GCCTAGTCAGCCATTGGATG 58.398 55.000 14.87 14.87 40.92 3.51
3014 3105 1.602311 CCTAGTCAGCCATTGGATGC 58.398 55.000 16.17 11.06 39.19 3.91
3015 3106 1.134007 CCTAGTCAGCCATTGGATGCA 60.134 52.381 16.17 2.74 39.19 3.96
3020 3111 0.176910 CAGCCATTGGATGCATGCAA 59.823 50.000 31.88 31.88 42.28 4.08
3023 3114 1.601903 GCCATTGGATGCATGCAATTG 59.398 47.619 35.33 32.13 44.83 2.32
3025 3116 2.611751 CCATTGGATGCATGCAATTGTG 59.388 45.455 35.33 27.31 44.83 3.33
3026 3117 2.388310 TTGGATGCATGCAATTGTGG 57.612 45.000 27.41 0.00 33.04 4.17
3028 3119 1.205179 TGGATGCATGCAATTGTGGTC 59.795 47.619 26.68 15.38 0.00 4.02
3029 3120 1.552226 GATGCATGCAATTGTGGTCG 58.448 50.000 26.68 0.00 0.00 4.79
3031 3122 0.240678 TGCATGCAATTGTGGTCGTC 59.759 50.000 20.30 0.00 0.00 4.20
3032 3123 0.523072 GCATGCAATTGTGGTCGTCT 59.477 50.000 14.21 0.00 0.00 4.18
3033 3124 1.730121 GCATGCAATTGTGGTCGTCTG 60.730 52.381 14.21 0.00 0.00 3.51
3034 3125 1.536766 CATGCAATTGTGGTCGTCTGT 59.463 47.619 7.40 0.00 0.00 3.41
3035 3126 1.674359 TGCAATTGTGGTCGTCTGTT 58.326 45.000 7.40 0.00 0.00 3.16
3036 3127 1.601903 TGCAATTGTGGTCGTCTGTTC 59.398 47.619 7.40 0.00 0.00 3.18
3038 3129 1.864711 CAATTGTGGTCGTCTGTTCGT 59.135 47.619 0.00 0.00 0.00 3.85
3039 3130 1.497991 ATTGTGGTCGTCTGTTCGTG 58.502 50.000 0.00 0.00 0.00 4.35
3041 3132 1.299926 GTGGTCGTCTGTTCGTGCT 60.300 57.895 0.00 0.00 0.00 4.40
3042 3133 1.007734 TGGTCGTCTGTTCGTGCTC 60.008 57.895 0.00 0.00 0.00 4.26
3043 3134 1.733399 GGTCGTCTGTTCGTGCTCC 60.733 63.158 0.00 0.00 0.00 4.70
3044 3135 1.733399 GTCGTCTGTTCGTGCTCCC 60.733 63.158 0.00 0.00 0.00 4.30
3046 3137 2.022129 CGTCTGTTCGTGCTCCCAC 61.022 63.158 0.00 0.00 38.62 4.61
3048 3139 1.069090 TCTGTTCGTGCTCCCACAC 59.931 57.895 0.00 0.00 42.17 3.82
3049 3140 1.961277 CTGTTCGTGCTCCCACACC 60.961 63.158 0.00 0.00 42.17 4.16
3052 3143 1.525077 TTCGTGCTCCCACACCAAC 60.525 57.895 0.00 0.00 42.17 3.77
3053 3144 3.345808 CGTGCTCCCACACCAACG 61.346 66.667 0.00 0.00 42.17 4.10
3054 3145 2.110213 GTGCTCCCACACCAACGA 59.890 61.111 0.00 0.00 41.67 3.85
3056 3147 2.668550 GCTCCCACACCAACGACC 60.669 66.667 0.00 0.00 0.00 4.79
3057 3148 2.032071 CTCCCACACCAACGACCC 59.968 66.667 0.00 0.00 0.00 4.46
3059 3150 2.281484 CCCACACCAACGACCCAG 60.281 66.667 0.00 0.00 0.00 4.45
3060 3151 2.508928 CCACACCAACGACCCAGT 59.491 61.111 0.00 0.00 0.00 4.00
3061 3152 1.597027 CCACACCAACGACCCAGTC 60.597 63.158 0.00 0.00 0.00 3.51
3064 3155 0.034896 ACACCAACGACCCAGTCATC 59.965 55.000 0.00 0.00 32.09 2.92
3065 3156 1.014044 CACCAACGACCCAGTCATCG 61.014 60.000 0.00 0.00 43.97 3.84
3070 3161 3.330766 CGACCCAGTCATCGTCTTC 57.669 57.895 0.00 0.00 33.63 2.87
3071 3162 0.179134 CGACCCAGTCATCGTCTTCC 60.179 60.000 0.00 0.00 33.63 3.46
3072 3163 0.895530 GACCCAGTCATCGTCTTCCA 59.104 55.000 0.00 0.00 32.09 3.53
3075 3166 3.309296 ACCCAGTCATCGTCTTCCATAT 58.691 45.455 0.00 0.00 0.00 1.78
3076 3167 3.322254 ACCCAGTCATCGTCTTCCATATC 59.678 47.826 0.00 0.00 0.00 1.63
3077 3168 3.569548 CCAGTCATCGTCTTCCATATCG 58.430 50.000 0.00 0.00 0.00 2.92
3079 3170 3.253432 CAGTCATCGTCTTCCATATCGGA 59.747 47.826 0.00 0.00 44.40 4.55
3086 3177 3.455152 TCCATATCGGAGCACGGG 58.545 61.111 0.96 0.00 44.45 5.28
3087 3178 2.357517 CCATATCGGAGCACGGGC 60.358 66.667 0.00 0.00 44.45 6.13
3088 3179 2.357517 CATATCGGAGCACGGGCC 60.358 66.667 5.73 0.00 44.45 5.80
3089 3180 2.524394 ATATCGGAGCACGGGCCT 60.524 61.111 5.73 0.00 44.45 5.19
3090 3181 2.574955 ATATCGGAGCACGGGCCTC 61.575 63.158 5.73 2.80 44.45 4.70
3096 3187 4.335647 AGCACGGGCCTCCACAAG 62.336 66.667 5.73 0.00 42.56 3.16
3099 3190 4.335647 ACGGGCCTCCACAAGCAG 62.336 66.667 0.84 0.00 0.00 4.24
3102 3193 2.749441 GGCCTCCACAAGCAGCTC 60.749 66.667 0.00 0.00 0.00 4.09
3103 3194 2.033141 GCCTCCACAAGCAGCTCA 59.967 61.111 0.00 0.00 0.00 4.26
3104 3195 2.331132 GCCTCCACAAGCAGCTCAC 61.331 63.158 0.00 0.00 0.00 3.51
3105 3196 1.071987 CCTCCACAAGCAGCTCACA 59.928 57.895 0.00 0.00 0.00 3.58
3106 3197 1.233285 CCTCCACAAGCAGCTCACAC 61.233 60.000 0.00 0.00 0.00 3.82
3108 3199 0.107263 TCCACAAGCAGCTCACACAA 60.107 50.000 0.00 0.00 0.00 3.33
3109 3200 0.029834 CCACAAGCAGCTCACACAAC 59.970 55.000 0.00 0.00 0.00 3.32
3110 3201 0.734309 CACAAGCAGCTCACACAACA 59.266 50.000 0.00 0.00 0.00 3.33
3111 3202 1.335810 CACAAGCAGCTCACACAACAT 59.664 47.619 0.00 0.00 0.00 2.71
3112 3203 1.335810 ACAAGCAGCTCACACAACATG 59.664 47.619 0.00 0.00 0.00 3.21
3113 3204 1.605232 CAAGCAGCTCACACAACATGA 59.395 47.619 0.00 0.00 0.00 3.07
3115 3206 3.339253 AGCAGCTCACACAACATGATA 57.661 42.857 0.00 0.00 0.00 2.15
3116 3207 3.268330 AGCAGCTCACACAACATGATAG 58.732 45.455 0.00 0.00 0.00 2.08
3117 3208 2.223203 GCAGCTCACACAACATGATAGC 60.223 50.000 0.00 0.00 38.85 2.97
3118 3209 3.004862 CAGCTCACACAACATGATAGCA 58.995 45.455 0.00 0.00 40.12 3.49
3120 3211 3.875727 AGCTCACACAACATGATAGCATC 59.124 43.478 0.00 0.00 40.12 3.91
3121 3212 3.003068 GCTCACACAACATGATAGCATCC 59.997 47.826 0.00 0.00 38.60 3.51
3122 3213 3.544684 TCACACAACATGATAGCATCCC 58.455 45.455 0.00 0.00 30.68 3.85
3123 3214 2.288729 CACACAACATGATAGCATCCCG 59.711 50.000 0.00 0.00 30.68 5.14
3126 3217 1.794701 CAACATGATAGCATCCCGACG 59.205 52.381 0.00 0.00 30.68 5.12
3127 3218 0.318441 ACATGATAGCATCCCGACGG 59.682 55.000 6.99 6.99 30.68 4.79
3128 3219 1.016130 CATGATAGCATCCCGACGGC 61.016 60.000 8.86 0.00 30.68 5.68
3130 3221 1.664965 GATAGCATCCCGACGGCAC 60.665 63.158 8.86 0.00 0.00 5.01
3131 3222 3.165160 ATAGCATCCCGACGGCACC 62.165 63.158 8.86 0.00 0.00 5.01
3134 3225 3.770040 CATCCCGACGGCACCAGA 61.770 66.667 8.86 0.00 0.00 3.86
3135 3226 2.764128 ATCCCGACGGCACCAGAT 60.764 61.111 8.86 2.27 0.00 2.90
3136 3227 2.797278 ATCCCGACGGCACCAGATC 61.797 63.158 8.86 0.00 0.00 2.75
3137 3228 4.873129 CCCGACGGCACCAGATCG 62.873 72.222 8.86 0.00 0.00 3.69
3139 3230 3.822192 CGACGGCACCAGATCGGA 61.822 66.667 10.05 0.00 38.63 4.55
3140 3231 2.105128 GACGGCACCAGATCGGAG 59.895 66.667 10.05 4.11 38.63 4.63
3155 3246 2.433318 GAGCACCGCCAGAGTGTC 60.433 66.667 0.00 0.00 37.56 3.67
3163 3254 3.114616 CCAGAGTGTCGCCGCTTG 61.115 66.667 0.00 0.00 0.00 4.01
3164 3255 3.114616 CAGAGTGTCGCCGCTTGG 61.115 66.667 0.00 0.00 0.00 3.61
3165 3256 3.616721 AGAGTGTCGCCGCTTGGT 61.617 61.111 0.00 0.00 34.16 3.67
3166 3257 2.665185 GAGTGTCGCCGCTTGGTT 60.665 61.111 0.00 0.00 34.16 3.67
3169 3260 3.959975 TGTCGCCGCTTGGTTTGC 61.960 61.111 0.00 0.00 34.16 3.68
3171 3262 3.659092 TCGCCGCTTGGTTTGCAG 61.659 61.111 0.00 0.00 34.16 4.41
3173 3264 4.283403 GCCGCTTGGTTTGCAGCA 62.283 61.111 0.00 0.00 35.60 4.41
3174 3265 2.416678 CCGCTTGGTTTGCAGCAA 59.583 55.556 2.83 2.83 38.09 3.91
3175 3266 1.950630 CCGCTTGGTTTGCAGCAAC 60.951 57.895 7.54 3.24 35.42 4.17
3176 3267 2.295052 CGCTTGGTTTGCAGCAACG 61.295 57.895 7.54 3.03 35.42 4.10
3177 3268 1.950630 GCTTGGTTTGCAGCAACGG 60.951 57.895 7.54 0.00 35.42 4.44
3178 3269 1.950630 CTTGGTTTGCAGCAACGGC 60.951 57.895 7.54 1.05 35.42 5.68
3179 3270 3.438017 TTGGTTTGCAGCAACGGCC 62.438 57.895 7.54 11.12 42.56 6.13
3180 3271 3.605664 GGTTTGCAGCAACGGCCT 61.606 61.111 7.54 0.00 42.56 5.19
3181 3272 2.265182 GGTTTGCAGCAACGGCCTA 61.265 57.895 7.54 0.00 42.56 3.93
3182 3273 1.210155 GTTTGCAGCAACGGCCTAG 59.790 57.895 7.54 0.00 42.56 3.02
3183 3274 2.625823 TTTGCAGCAACGGCCTAGC 61.626 57.895 7.54 1.32 42.56 3.42
3186 3277 3.503363 CAGCAACGGCCTAGCAGC 61.503 66.667 12.53 4.38 42.56 5.25
3188 3279 3.804193 GCAACGGCCTAGCAGCAC 61.804 66.667 0.00 0.00 0.00 4.40
3189 3280 3.490759 CAACGGCCTAGCAGCACG 61.491 66.667 0.00 0.00 34.13 5.34
3190 3281 4.760047 AACGGCCTAGCAGCACGG 62.760 66.667 0.00 0.00 32.82 4.94
3242 5698 1.501741 GTCGCCATCGCAACATTGT 59.498 52.632 0.00 0.00 35.26 2.71
3245 5701 1.226379 GCCATCGCAACATTGTCCG 60.226 57.895 0.00 0.00 34.03 4.79
3249 5705 2.267426 CATCGCAACATTGTCCGAGTA 58.733 47.619 14.85 0.00 32.86 2.59
3250 5706 1.990799 TCGCAACATTGTCCGAGTAG 58.009 50.000 8.01 0.00 0.00 2.57
3251 5707 0.370273 CGCAACATTGTCCGAGTAGC 59.630 55.000 4.38 0.00 0.00 3.58
3252 5708 0.727398 GCAACATTGTCCGAGTAGCC 59.273 55.000 0.00 0.00 0.00 3.93
3253 5709 0.999406 CAACATTGTCCGAGTAGCCG 59.001 55.000 0.00 0.00 0.00 5.52
3254 5710 0.892755 AACATTGTCCGAGTAGCCGA 59.107 50.000 0.00 0.00 0.00 5.54
3255 5711 0.456221 ACATTGTCCGAGTAGCCGAG 59.544 55.000 0.00 0.00 0.00 4.63
3256 5712 0.456221 CATTGTCCGAGTAGCCGAGT 59.544 55.000 0.00 0.00 0.00 4.18
3257 5713 0.739561 ATTGTCCGAGTAGCCGAGTC 59.260 55.000 0.00 0.00 0.00 3.36
3261 5717 4.592936 CGAGTAGCCGAGTCGCCG 62.593 72.222 7.12 0.00 43.73 6.46
3262 5718 3.507009 GAGTAGCCGAGTCGCCGT 61.507 66.667 7.12 0.00 0.00 5.68
3263 5719 3.452024 GAGTAGCCGAGTCGCCGTC 62.452 68.421 7.12 0.00 0.00 4.79
3264 5720 4.549516 GTAGCCGAGTCGCCGTCC 62.550 72.222 7.12 0.00 0.00 4.79
3269 5725 4.717629 CGAGTCGCCGTCCAAGCA 62.718 66.667 0.00 0.00 0.00 3.91
3270 5726 3.112709 GAGTCGCCGTCCAAGCAC 61.113 66.667 0.00 0.00 0.00 4.40
3271 5727 4.681978 AGTCGCCGTCCAAGCACC 62.682 66.667 0.00 0.00 0.00 5.01
3294 5750 4.996434 GCAGCACGGCCTCACTGT 62.996 66.667 14.80 0.00 38.94 3.55
3295 5751 2.281070 CAGCACGGCCTCACTGTT 60.281 61.111 0.00 0.00 34.87 3.16
3296 5752 2.281070 AGCACGGCCTCACTGTTG 60.281 61.111 0.00 0.00 34.87 3.33
3298 5754 2.591429 CACGGCCTCACTGTTGCA 60.591 61.111 0.00 0.00 34.87 4.08
3300 5756 2.186826 ACGGCCTCACTGTTGCAAC 61.187 57.895 22.83 22.83 32.29 4.17
3301 5757 2.186160 CGGCCTCACTGTTGCAACA 61.186 57.895 29.36 29.36 37.37 3.33
3302 5758 1.518056 CGGCCTCACTGTTGCAACAT 61.518 55.000 31.17 18.55 38.41 2.71
3304 5760 0.953727 GCCTCACTGTTGCAACATCA 59.046 50.000 31.17 16.98 38.41 3.07
3305 5761 1.335324 GCCTCACTGTTGCAACATCAC 60.335 52.381 31.17 14.46 38.41 3.06
3306 5762 1.267806 CCTCACTGTTGCAACATCACC 59.732 52.381 31.17 4.00 38.41 4.02
3307 5763 0.943673 TCACTGTTGCAACATCACCG 59.056 50.000 31.17 21.18 38.41 4.94
3308 5764 0.040157 CACTGTTGCAACATCACCGG 60.040 55.000 31.17 20.50 38.41 5.28
3309 5765 0.179032 ACTGTTGCAACATCACCGGA 60.179 50.000 31.17 7.26 38.41 5.14
3310 5766 0.518636 CTGTTGCAACATCACCGGAG 59.481 55.000 31.17 14.07 38.41 4.63
3311 5767 1.210155 GTTGCAACATCACCGGAGC 59.790 57.895 24.52 0.47 0.00 4.70
3312 5768 1.228094 TTGCAACATCACCGGAGCA 60.228 52.632 9.46 3.40 0.00 4.26
3314 5770 3.044059 GCAACATCACCGGAGCAGC 62.044 63.158 9.46 0.00 0.00 5.25
3315 5771 1.376424 CAACATCACCGGAGCAGCT 60.376 57.895 9.46 0.00 0.00 4.24
3316 5772 1.078848 AACATCACCGGAGCAGCTC 60.079 57.895 14.69 14.69 0.00 4.09
3317 5773 2.584418 CATCACCGGAGCAGCTCG 60.584 66.667 16.47 11.24 0.00 5.03
3318 5774 2.755876 ATCACCGGAGCAGCTCGA 60.756 61.111 16.47 8.19 0.00 4.04
3319 5775 2.780094 ATCACCGGAGCAGCTCGAG 61.780 63.158 16.47 8.45 0.00 4.04
3339 5795 3.782244 GCCGTCGCAGCAGTTGAG 61.782 66.667 0.00 0.00 34.03 3.02
3340 5796 3.782244 CCGTCGCAGCAGTTGAGC 61.782 66.667 0.00 0.00 0.00 4.26
3341 5797 3.782244 CGTCGCAGCAGTTGAGCC 61.782 66.667 0.00 0.00 34.23 4.70
3342 5798 2.666190 GTCGCAGCAGTTGAGCCA 60.666 61.111 0.00 0.00 34.23 4.75
3343 5799 2.037136 GTCGCAGCAGTTGAGCCAT 61.037 57.895 0.00 0.00 34.23 4.40
3344 5800 1.742880 TCGCAGCAGTTGAGCCATC 60.743 57.895 0.00 0.00 34.23 3.51
3345 5801 2.789917 GCAGCAGTTGAGCCATCG 59.210 61.111 0.00 0.00 34.23 3.84
3346 5802 2.037136 GCAGCAGTTGAGCCATCGT 61.037 57.895 0.00 0.00 34.23 3.73
3347 5803 1.975363 GCAGCAGTTGAGCCATCGTC 61.975 60.000 0.00 0.00 34.23 4.20
3348 5804 1.446792 AGCAGTTGAGCCATCGTCG 60.447 57.895 0.00 0.00 34.23 5.12
3349 5805 3.084579 CAGTTGAGCCATCGTCGC 58.915 61.111 0.00 0.00 0.00 5.19
3350 5806 1.737735 CAGTTGAGCCATCGTCGCA 60.738 57.895 0.00 0.00 0.00 5.10
3351 5807 1.446792 AGTTGAGCCATCGTCGCAG 60.447 57.895 0.00 0.00 0.00 5.18
3352 5808 2.815211 TTGAGCCATCGTCGCAGC 60.815 61.111 0.00 0.00 0.00 5.25
3353 5809 3.588057 TTGAGCCATCGTCGCAGCA 62.588 57.895 0.00 0.00 0.00 4.41
3354 5810 2.587194 GAGCCATCGTCGCAGCAT 60.587 61.111 0.00 0.00 0.00 3.79
3355 5811 2.124983 AGCCATCGTCGCAGCATT 60.125 55.556 0.00 0.00 0.00 3.56
3356 5812 2.023741 GCCATCGTCGCAGCATTG 59.976 61.111 0.00 0.00 0.00 2.82
3357 5813 2.711311 CCATCGTCGCAGCATTGG 59.289 61.111 0.00 0.00 0.00 3.16
3358 5814 2.108514 CCATCGTCGCAGCATTGGT 61.109 57.895 0.00 0.00 0.00 3.67
3359 5815 1.647545 CCATCGTCGCAGCATTGGTT 61.648 55.000 0.00 0.00 0.00 3.67
3360 5816 0.247814 CATCGTCGCAGCATTGGTTC 60.248 55.000 0.00 0.00 0.00 3.62
3361 5817 0.673333 ATCGTCGCAGCATTGGTTCA 60.673 50.000 0.00 0.00 0.00 3.18
3362 5818 1.154413 CGTCGCAGCATTGGTTCAC 60.154 57.895 0.00 0.00 0.00 3.18
3363 5819 1.840630 CGTCGCAGCATTGGTTCACA 61.841 55.000 0.00 0.00 0.00 3.58
3364 5820 0.110056 GTCGCAGCATTGGTTCACAG 60.110 55.000 0.00 0.00 0.00 3.66
3365 5821 1.443194 CGCAGCATTGGTTCACAGC 60.443 57.895 0.00 0.00 0.00 4.40
3366 5822 1.443194 GCAGCATTGGTTCACAGCG 60.443 57.895 0.00 0.00 0.00 5.18
3367 5823 1.443194 CAGCATTGGTTCACAGCGC 60.443 57.895 0.00 0.00 0.00 5.92
3368 5824 2.502510 GCATTGGTTCACAGCGCG 60.503 61.111 0.00 0.00 0.00 6.86
3369 5825 2.176546 CATTGGTTCACAGCGCGG 59.823 61.111 8.83 5.83 0.00 6.46
3370 5826 3.737172 ATTGGTTCACAGCGCGGC 61.737 61.111 8.83 0.00 0.00 6.53
3394 5850 4.899239 GTCCCAGCATCGCCGGAG 62.899 72.222 5.05 0.00 29.85 4.63
3397 5853 4.923942 CCAGCATCGCCGGAGCAT 62.924 66.667 5.05 0.00 39.83 3.79
3398 5854 3.344215 CAGCATCGCCGGAGCATC 61.344 66.667 5.05 0.00 39.83 3.91
3409 5865 4.593864 GAGCATCCCCGAGCCGTC 62.594 72.222 0.00 0.00 0.00 4.79
3412 5868 4.570663 CATCCCCGAGCCGTCGTC 62.571 72.222 0.00 0.00 45.30 4.20
3439 5895 2.769617 CGTCACCGTCGCAACATC 59.230 61.111 0.00 0.00 0.00 3.06
3440 5896 2.769617 GTCACCGTCGCAACATCG 59.230 61.111 0.00 0.00 0.00 3.84
3441 5897 2.019951 GTCACCGTCGCAACATCGT 61.020 57.895 0.00 0.00 0.00 3.73
3442 5898 1.731613 TCACCGTCGCAACATCGTC 60.732 57.895 0.00 0.00 0.00 4.20
3443 5899 2.803670 ACCGTCGCAACATCGTCG 60.804 61.111 0.00 0.00 39.79 5.12
3445 5901 2.503158 CGTCGCAACATCGTCGGA 60.503 61.111 0.00 0.00 37.36 4.55
3446 5902 2.497092 CGTCGCAACATCGTCGGAG 61.497 63.158 0.00 0.00 37.36 4.63
3447 5903 2.506217 TCGCAACATCGTCGGAGC 60.506 61.111 0.00 0.00 0.00 4.70
3448 5904 2.809174 CGCAACATCGTCGGAGCA 60.809 61.111 0.00 0.00 0.00 4.26
3449 5905 2.792290 CGCAACATCGTCGGAGCAG 61.792 63.158 0.00 0.00 0.00 4.24
3450 5906 3.084579 CAACATCGTCGGAGCAGC 58.915 61.111 0.00 0.00 0.00 5.25
3451 5907 1.446792 CAACATCGTCGGAGCAGCT 60.447 57.895 0.00 0.00 0.00 4.24
3452 5908 1.153745 AACATCGTCGGAGCAGCTC 60.154 57.895 14.69 14.69 0.00 4.09
3453 5909 2.653448 CATCGTCGGAGCAGCTCG 60.653 66.667 16.47 11.56 0.00 5.03
3454 5910 2.824489 ATCGTCGGAGCAGCTCGA 60.824 61.111 16.47 13.64 35.14 4.04
3455 5911 2.829206 ATCGTCGGAGCAGCTCGAG 61.829 63.158 16.47 8.45 36.00 4.04
3457 5913 4.863925 GTCGGAGCAGCTCGAGCC 62.864 72.222 32.94 19.13 43.38 4.70
3466 5922 4.221422 GCTCGAGCCGCCACCATA 62.221 66.667 27.22 0.00 34.31 2.74
3467 5923 2.028190 CTCGAGCCGCCACCATAG 59.972 66.667 0.00 0.00 0.00 2.23
3468 5924 4.221422 TCGAGCCGCCACCATAGC 62.221 66.667 0.00 0.00 0.00 2.97
3469 5925 4.529219 CGAGCCGCCACCATAGCA 62.529 66.667 0.00 0.00 0.00 3.49
3470 5926 2.111878 GAGCCGCCACCATAGCAT 59.888 61.111 0.00 0.00 0.00 3.79
3471 5927 1.963338 GAGCCGCCACCATAGCATC 60.963 63.158 0.00 0.00 0.00 3.91
3472 5928 3.349006 GCCGCCACCATAGCATCG 61.349 66.667 0.00 0.00 0.00 3.84
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.157252 AGCCGGTGCCATCGATCT 61.157 61.111 0.00 0.00 38.69 2.75
1 2 2.923426 TTCAGCCGGTGCCATCGATC 62.923 60.000 0.00 0.00 38.69 3.69
2 3 2.329539 ATTCAGCCGGTGCCATCGAT 62.330 55.000 0.00 0.00 38.69 3.59
41 43 9.119418 TGCACGTGTACCTTACTAGTATTATTA 57.881 33.333 18.38 0.00 0.00 0.98
80 82 3.389925 AATGCACAAACCACCAGAATG 57.610 42.857 0.00 0.00 0.00 2.67
133 135 5.798125 TTCCACTAAATTTTGCCACATGA 57.202 34.783 0.00 0.00 0.00 3.07
147 149 5.765576 TGCCTAACCTTACATTCCACTAA 57.234 39.130 0.00 0.00 0.00 2.24
200 202 2.290071 GGCTTGCCTAAGGTGTGACTTA 60.290 50.000 4.11 0.00 34.40 2.24
204 206 0.250727 GTGGCTTGCCTAAGGTGTGA 60.251 55.000 13.18 0.00 34.40 3.58
318 320 3.780804 TTGCCACAACTAAGCTTAGGA 57.219 42.857 31.67 8.19 35.08 2.94
400 403 6.817765 TTGGTCAAACTTGCCTAAGATTAG 57.182 37.500 0.00 0.00 37.36 1.73
401 404 7.775053 ATTTGGTCAAACTTGCCTAAGATTA 57.225 32.000 0.00 0.00 37.36 1.75
402 405 6.670695 ATTTGGTCAAACTTGCCTAAGATT 57.329 33.333 0.00 0.00 37.36 2.40
403 406 6.670695 AATTTGGTCAAACTTGCCTAAGAT 57.329 33.333 0.00 0.00 37.36 2.40
404 407 6.208599 CCTAATTTGGTCAAACTTGCCTAAGA 59.791 38.462 0.00 0.00 37.36 2.10
405 408 6.015434 ACCTAATTTGGTCAAACTTGCCTAAG 60.015 38.462 5.68 0.00 34.86 2.18
406 409 5.836358 ACCTAATTTGGTCAAACTTGCCTAA 59.164 36.000 5.68 4.36 34.86 2.69
407 410 5.390387 ACCTAATTTGGTCAAACTTGCCTA 58.610 37.500 5.68 0.00 34.86 3.93
408 411 4.223144 ACCTAATTTGGTCAAACTTGCCT 58.777 39.130 5.68 0.00 34.86 4.75
409 412 4.600692 ACCTAATTTGGTCAAACTTGCC 57.399 40.909 5.68 0.00 34.86 4.52
410 413 5.243060 ACCTACCTAATTTGGTCAAACTTGC 59.757 40.000 15.13 0.00 41.22 4.01
411 414 6.264518 ACACCTACCTAATTTGGTCAAACTTG 59.735 38.462 15.13 7.84 41.22 3.16
412 415 6.370453 ACACCTACCTAATTTGGTCAAACTT 58.630 36.000 15.13 0.00 41.22 2.66
413 416 5.948842 ACACCTACCTAATTTGGTCAAACT 58.051 37.500 15.13 0.00 41.22 2.66
414 417 6.644248 AACACCTACCTAATTTGGTCAAAC 57.356 37.500 15.13 0.00 41.22 2.93
415 418 6.041069 CCAAACACCTACCTAATTTGGTCAAA 59.959 38.462 15.13 0.00 42.81 2.69
416 419 5.536916 CCAAACACCTACCTAATTTGGTCAA 59.463 40.000 15.13 0.00 42.81 3.18
417 420 5.074115 CCAAACACCTACCTAATTTGGTCA 58.926 41.667 15.13 2.12 42.81 4.02
418 421 5.638596 CCAAACACCTACCTAATTTGGTC 57.361 43.478 15.13 0.00 42.81 4.02
421 424 6.642707 TGAACCAAACACCTACCTAATTTG 57.357 37.500 0.00 0.00 0.00 2.32
422 425 6.837048 AGTTGAACCAAACACCTACCTAATTT 59.163 34.615 0.00 0.00 32.21 1.82
423 426 6.370453 AGTTGAACCAAACACCTACCTAATT 58.630 36.000 0.00 0.00 32.21 1.40
424 427 5.948842 AGTTGAACCAAACACCTACCTAAT 58.051 37.500 0.00 0.00 32.21 1.73
425 428 5.376756 AGTTGAACCAAACACCTACCTAA 57.623 39.130 0.00 0.00 32.21 2.69
426 429 6.464749 CCTTAGTTGAACCAAACACCTACCTA 60.465 42.308 0.00 0.00 32.21 3.08
427 430 3.945640 AGTTGAACCAAACACCTACCT 57.054 42.857 0.00 0.00 32.21 3.08
428 431 4.517832 CCTTAGTTGAACCAAACACCTACC 59.482 45.833 0.00 0.00 32.21 3.18
429 432 4.023450 GCCTTAGTTGAACCAAACACCTAC 60.023 45.833 0.00 0.00 32.21 3.18
430 433 4.139038 GCCTTAGTTGAACCAAACACCTA 58.861 43.478 0.00 0.00 32.21 3.08
431 434 2.956333 GCCTTAGTTGAACCAAACACCT 59.044 45.455 0.00 0.00 32.21 4.00
432 435 2.691011 TGCCTTAGTTGAACCAAACACC 59.309 45.455 0.00 0.00 32.21 4.16
433 436 4.142249 ACTTGCCTTAGTTGAACCAAACAC 60.142 41.667 0.00 0.00 32.21 3.32
434 437 4.020543 ACTTGCCTTAGTTGAACCAAACA 58.979 39.130 0.00 0.00 32.21 2.83
435 438 4.142249 ACACTTGCCTTAGTTGAACCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
436 439 4.020543 ACACTTGCCTTAGTTGAACCAAA 58.979 39.130 0.00 0.00 0.00 3.28
437 440 3.380004 CACACTTGCCTTAGTTGAACCAA 59.620 43.478 0.00 0.00 0.00 3.67
438 441 2.948979 CACACTTGCCTTAGTTGAACCA 59.051 45.455 0.00 0.00 0.00 3.67
439 442 2.293399 CCACACTTGCCTTAGTTGAACC 59.707 50.000 0.00 0.00 0.00 3.62
440 443 2.287608 GCCACACTTGCCTTAGTTGAAC 60.288 50.000 0.00 0.00 0.00 3.18
441 444 1.953686 GCCACACTTGCCTTAGTTGAA 59.046 47.619 0.00 0.00 0.00 2.69
585 590 4.332828 ACCAAACATCTACCTAACTTGGC 58.667 43.478 0.00 0.00 36.18 4.52
623 628 6.100404 TGCTCATAAAAACAAATCCTTGCT 57.900 33.333 0.00 0.00 35.84 3.91
634 641 2.164422 GGGGCTCACTGCTCATAAAAAC 59.836 50.000 0.00 0.00 46.01 2.43
639 648 0.909133 TGTGGGGCTCACTGCTCATA 60.909 55.000 19.90 0.00 46.01 2.15
702 711 5.300539 TGCTCAAATTGTTAGCCACACTTTA 59.699 36.000 4.54 0.00 36.40 1.85
780 812 6.821616 ATCTAGAAGACTCCATGGTTGAAT 57.178 37.500 12.58 0.00 0.00 2.57
865 897 5.441500 TGAAGCCAATCCGATGGTATAAAA 58.558 37.500 4.21 0.00 42.75 1.52
869 901 3.560025 GGATGAAGCCAATCCGATGGTAT 60.560 47.826 4.21 0.00 42.75 2.73
897 929 5.063817 AGTTGTGAAAAACTTTGAATGCTGC 59.936 36.000 0.00 0.00 37.05 5.25
950 984 0.540365 ATGAGCCACCAACAACAGGG 60.540 55.000 0.00 0.00 0.00 4.45
951 985 0.599558 CATGAGCCACCAACAACAGG 59.400 55.000 0.00 0.00 0.00 4.00
980 1014 2.342179 TGTGAGCGATATTTTGCGACA 58.658 42.857 0.00 1.02 37.33 4.35
1110 1144 3.007323 AGGTTGGAGCCGTACCCC 61.007 66.667 6.92 0.00 32.20 4.95
1119 1153 2.125350 GCCTCGAGCAGGTTGGAG 60.125 66.667 6.99 0.00 45.61 3.86
1397 1431 2.365617 ACGAGGAAAGCAGAGACTGAAA 59.634 45.455 2.81 0.00 32.44 2.69
1400 1434 1.730772 CGACGAGGAAAGCAGAGACTG 60.731 57.143 0.00 0.00 34.12 3.51
1401 1435 0.523966 CGACGAGGAAAGCAGAGACT 59.476 55.000 0.00 0.00 0.00 3.24
1417 1458 2.476619 CACATTCAGACTTGTGGACGAC 59.523 50.000 5.17 0.00 39.61 4.34
1429 1470 6.017192 CCAAAACACTGTATCACACATTCAGA 60.017 38.462 0.00 0.00 36.29 3.27
1430 1471 6.144854 CCAAAACACTGTATCACACATTCAG 58.855 40.000 0.00 0.00 36.29 3.02
1431 1472 5.592282 ACCAAAACACTGTATCACACATTCA 59.408 36.000 0.00 0.00 36.29 2.57
1432 1473 5.914635 CACCAAAACACTGTATCACACATTC 59.085 40.000 0.00 0.00 36.29 2.67
1433 1474 5.592282 TCACCAAAACACTGTATCACACATT 59.408 36.000 0.00 0.00 36.29 2.71
1434 1475 5.008613 GTCACCAAAACACTGTATCACACAT 59.991 40.000 0.00 0.00 36.29 3.21
1435 1476 4.334203 GTCACCAAAACACTGTATCACACA 59.666 41.667 0.00 0.00 35.30 3.72
1438 1479 3.805422 TCGTCACCAAAACACTGTATCAC 59.195 43.478 0.00 0.00 0.00 3.06
1443 1484 2.872245 CAGATCGTCACCAAAACACTGT 59.128 45.455 0.00 0.00 0.00 3.55
1448 1489 1.523758 AGCCAGATCGTCACCAAAAC 58.476 50.000 0.00 0.00 0.00 2.43
1451 1492 0.955428 GCAAGCCAGATCGTCACCAA 60.955 55.000 0.00 0.00 0.00 3.67
1457 1498 1.078848 GTCCAGCAAGCCAGATCGT 60.079 57.895 0.00 0.00 0.00 3.73
1459 1500 0.251354 TCAGTCCAGCAAGCCAGATC 59.749 55.000 0.00 0.00 0.00 2.75
1461 1502 1.372683 GTCAGTCCAGCAAGCCAGA 59.627 57.895 0.00 0.00 0.00 3.86
1465 1506 1.072159 ACCTGTCAGTCCAGCAAGC 59.928 57.895 0.00 0.00 0.00 4.01
1470 1511 1.674057 GTCCCACCTGTCAGTCCAG 59.326 63.158 0.00 0.00 0.00 3.86
1705 1746 1.139095 CGAGGAGGAACTGGTACGC 59.861 63.158 0.00 0.00 41.55 4.42
1955 1996 2.232756 ATTGTGTGCAGTGTACGTCA 57.767 45.000 6.88 5.99 0.00 4.35
1965 2006 4.074259 AGAACTCAGCAATATTGTGTGCA 58.926 39.130 16.61 0.00 43.42 4.57
1980 2021 1.585006 GACGGCCTCGAAGAACTCA 59.415 57.895 0.00 0.00 40.11 3.41
2086 2127 4.867599 GACGCCGACCCCGATGAC 62.868 72.222 0.00 0.00 38.22 3.06
2227 2268 3.553095 GAACCTGGCCTTCCACGCT 62.553 63.158 3.32 0.00 37.47 5.07
2229 2270 1.672356 CAGAACCTGGCCTTCCACG 60.672 63.158 3.32 0.00 37.47 4.94
2265 2306 0.250124 AGCCATCGTGACGAAAACCA 60.250 50.000 13.14 0.00 39.99 3.67
2268 2309 2.163818 AGAAGCCATCGTGACGAAAA 57.836 45.000 13.14 0.00 39.99 2.29
2269 2310 2.066262 GAAGAAGCCATCGTGACGAAA 58.934 47.619 13.14 0.00 39.99 3.46
2360 2401 0.392193 CTGCACTCGGCCAATCTTCT 60.392 55.000 2.24 0.00 43.89 2.85
2398 2439 4.996122 CACTATACGTCTATCTTCCGTCCT 59.004 45.833 0.00 0.00 36.12 3.85
2402 2443 4.465016 GTGCACTATACGTCTATCTTCCG 58.535 47.826 10.32 0.00 0.00 4.30
2413 2454 0.102481 AGGCCTTCGTGCACTATACG 59.898 55.000 16.19 0.55 42.56 3.06
2417 2458 4.475051 TTATAAAGGCCTTCGTGCACTA 57.525 40.909 20.79 5.81 0.00 2.74
2495 2536 9.887406 TGGTTCGTTTTCAAATTATCTTACTTC 57.113 29.630 0.00 0.00 0.00 3.01
2504 2548 6.885952 TGATCCTGGTTCGTTTTCAAATTA 57.114 33.333 0.00 0.00 0.00 1.40
2506 2550 5.476599 TCATGATCCTGGTTCGTTTTCAAAT 59.523 36.000 0.00 0.00 0.00 2.32
2529 2573 8.664211 AAGTTTTATCCGAGGTCTATGAAATC 57.336 34.615 0.00 0.00 0.00 2.17
2552 2596 6.658831 ACGTGTGACACTTATCATTTGAAAG 58.341 36.000 14.42 0.00 31.34 2.62
2555 2599 7.222031 GCTATACGTGTGACACTTATCATTTGA 59.778 37.037 16.57 0.08 32.48 2.69
2576 2621 1.548719 ACTGGTGTGCTTCGTGCTATA 59.451 47.619 5.00 0.00 43.37 1.31
2577 2622 0.321671 ACTGGTGTGCTTCGTGCTAT 59.678 50.000 5.00 0.00 43.37 2.97
2579 2632 1.595382 GACTGGTGTGCTTCGTGCT 60.595 57.895 5.00 0.00 43.37 4.40
2591 2644 1.944709 GTACAAAACGCCAAGACTGGT 59.055 47.619 0.00 0.00 45.53 4.00
2592 2645 1.944024 TGTACAAAACGCCAAGACTGG 59.056 47.619 0.00 0.00 46.65 4.00
2593 2646 3.064820 AGTTGTACAAAACGCCAAGACTG 59.935 43.478 10.51 0.00 35.13 3.51
2598 2651 5.564048 ACTTTAGTTGTACAAAACGCCAA 57.436 34.783 10.51 0.00 35.13 4.52
2684 2760 7.871853 ACGCTTTTTATGTCAAGTTTAGTCAT 58.128 30.769 0.00 0.00 0.00 3.06
2686 2762 8.469125 CAAACGCTTTTTATGTCAAGTTTAGTC 58.531 33.333 0.00 0.00 0.00 2.59
2706 2782 1.133025 ACATATGGCAGCTTCAAACGC 59.867 47.619 7.80 0.00 0.00 4.84
2707 2783 3.429085 GAACATATGGCAGCTTCAAACG 58.571 45.455 7.80 0.00 0.00 3.60
2716 2792 2.779282 TGGCACGAACATATGGCAG 58.221 52.632 7.80 0.00 45.49 4.85
2737 2813 4.467769 AGGATCCTGATAAATGCCACAAG 58.532 43.478 15.29 0.00 0.00 3.16
2738 2814 4.524802 AGGATCCTGATAAATGCCACAA 57.475 40.909 15.29 0.00 0.00 3.33
2746 2822 4.583489 GTCACGTCCTAGGATCCTGATAAA 59.417 45.833 25.28 2.35 0.00 1.40
2769 2853 6.424812 TCATGGATTAAATGTCAGCGTGATAG 59.575 38.462 0.00 0.00 0.00 2.08
2774 2858 4.769688 TCTCATGGATTAAATGTCAGCGT 58.230 39.130 0.00 0.00 0.00 5.07
2775 2859 5.052481 TCTCTCATGGATTAAATGTCAGCG 58.948 41.667 0.00 0.00 0.00 5.18
2785 2869 7.423844 TTGTTAGCTCTTCTCTCATGGATTA 57.576 36.000 0.00 0.00 0.00 1.75
2786 2870 5.946942 TGTTAGCTCTTCTCTCATGGATT 57.053 39.130 0.00 0.00 0.00 3.01
2790 2874 5.931146 ACAGTTTGTTAGCTCTTCTCTCATG 59.069 40.000 0.00 0.00 0.00 3.07
2792 2876 5.537300 ACAGTTTGTTAGCTCTTCTCTCA 57.463 39.130 0.00 0.00 0.00 3.27
2799 2883 5.050295 GCGAACTAAACAGTTTGTTAGCTCT 60.050 40.000 23.35 4.70 42.90 4.09
2804 2888 5.976534 TCGTAGCGAACTAAACAGTTTGTTA 59.023 36.000 8.93 0.00 34.22 2.41
2808 2892 4.678742 GTCTCGTAGCGAACTAAACAGTTT 59.321 41.667 3.49 3.49 34.74 2.66
2812 2897 3.120060 GGAGTCTCGTAGCGAACTAAACA 60.120 47.826 0.00 0.00 34.74 2.83
2813 2898 3.424487 GGAGTCTCGTAGCGAACTAAAC 58.576 50.000 0.00 0.00 34.74 2.01
2841 2927 1.501604 AGGAGTAGTTTTGGGGCCAAA 59.498 47.619 4.39 0.00 43.23 3.28
2843 2929 0.404040 CAGGAGTAGTTTTGGGGCCA 59.596 55.000 4.39 0.00 0.00 5.36
2894 2983 1.470805 GGTCCGGTGCATTTTTATGCC 60.471 52.381 0.00 0.08 46.43 4.40
2909 3000 3.566322 TCAGGTGTGTTTTTATTGGTCCG 59.434 43.478 0.00 0.00 0.00 4.79
2926 3017 9.590451 CTGCAACATATATTTTCATTTTCAGGT 57.410 29.630 0.00 0.00 0.00 4.00
2930 3021 8.060090 GCAGCTGCAACATATATTTTCATTTTC 58.940 33.333 33.36 0.00 41.59 2.29
2935 3026 5.840243 AGCAGCTGCAACATATATTTTCA 57.160 34.783 38.24 0.00 45.16 2.69
2936 3027 6.376978 CCTAGCAGCTGCAACATATATTTTC 58.623 40.000 38.24 5.78 45.16 2.29
2938 3029 4.217118 GCCTAGCAGCTGCAACATATATTT 59.783 41.667 38.24 17.40 45.16 1.40
2940 3031 3.341823 GCCTAGCAGCTGCAACATATAT 58.658 45.455 38.24 18.88 45.16 0.86
2941 3032 2.771089 GCCTAGCAGCTGCAACATATA 58.229 47.619 38.24 20.40 45.16 0.86
2942 3033 1.602311 GCCTAGCAGCTGCAACATAT 58.398 50.000 38.24 20.37 45.16 1.78
2943 3034 0.811219 CGCCTAGCAGCTGCAACATA 60.811 55.000 38.24 21.47 45.16 2.29
2944 3035 2.110967 CGCCTAGCAGCTGCAACAT 61.111 57.895 38.24 21.51 45.16 2.71
2956 3047 2.047844 CATCCGGATGGCGCCTAG 60.048 66.667 32.99 15.44 35.24 3.02
2957 3048 4.314440 GCATCCGGATGGCGCCTA 62.314 66.667 38.49 14.84 39.16 3.93
2960 3051 3.730761 GATGCATCCGGATGGCGC 61.731 66.667 38.49 27.63 39.16 6.53
2961 3052 3.052082 GGATGCATCCGGATGGCG 61.052 66.667 38.49 19.63 39.16 5.69
2970 3061 1.202114 TGTTTTTCCGCTGGATGCATC 59.798 47.619 18.81 18.81 43.06 3.91
2973 3064 2.262211 GAATGTTTTTCCGCTGGATGC 58.738 47.619 0.00 0.00 38.57 3.91
2974 3065 2.518949 CGAATGTTTTTCCGCTGGATG 58.481 47.619 0.00 0.00 0.00 3.51
2975 3066 1.135402 GCGAATGTTTTTCCGCTGGAT 60.135 47.619 0.00 0.00 43.75 3.41
2977 3068 0.732538 GGCGAATGTTTTTCCGCTGG 60.733 55.000 0.00 0.00 46.02 4.85
2978 3069 0.240945 AGGCGAATGTTTTTCCGCTG 59.759 50.000 0.00 0.00 46.02 5.18
2979 3070 1.737793 CTAGGCGAATGTTTTTCCGCT 59.262 47.619 0.00 0.00 46.02 5.52
2980 3071 1.467342 ACTAGGCGAATGTTTTTCCGC 59.533 47.619 0.00 0.00 46.04 5.54
2981 3072 2.739913 TGACTAGGCGAATGTTTTTCCG 59.260 45.455 0.00 0.00 0.00 4.30
2982 3073 3.426292 GCTGACTAGGCGAATGTTTTTCC 60.426 47.826 0.00 0.00 0.00 3.13
2983 3074 3.426292 GGCTGACTAGGCGAATGTTTTTC 60.426 47.826 0.00 0.00 39.88 2.29
2984 3075 2.488153 GGCTGACTAGGCGAATGTTTTT 59.512 45.455 0.00 0.00 39.88 1.94
2985 3076 2.084546 GGCTGACTAGGCGAATGTTTT 58.915 47.619 0.00 0.00 39.88 2.43
2987 3078 3.460648 GGCTGACTAGGCGAATGTT 57.539 52.632 0.00 0.00 39.88 2.71
2995 3086 1.134007 TGCATCCAATGGCTGACTAGG 60.134 52.381 7.38 0.00 0.00 3.02
2996 3087 2.336945 TGCATCCAATGGCTGACTAG 57.663 50.000 7.38 0.00 0.00 2.57
2997 3088 2.578786 CATGCATCCAATGGCTGACTA 58.421 47.619 7.38 0.00 0.00 2.59
2998 3089 1.399714 CATGCATCCAATGGCTGACT 58.600 50.000 7.38 0.00 0.00 3.41
3000 3091 0.684805 TGCATGCATCCAATGGCTGA 60.685 50.000 18.46 0.00 0.00 4.26
3001 3092 0.176910 TTGCATGCATCCAATGGCTG 59.823 50.000 23.37 0.00 0.00 4.85
3003 3094 1.601903 CAATTGCATGCATCCAATGGC 59.398 47.619 23.37 7.04 32.40 4.40
3004 3095 2.611751 CACAATTGCATGCATCCAATGG 59.388 45.455 23.37 15.75 32.40 3.16
3005 3096 2.611751 CCACAATTGCATGCATCCAATG 59.388 45.455 23.37 17.23 32.40 2.82
3007 3098 1.624312 ACCACAATTGCATGCATCCAA 59.376 42.857 23.37 5.31 0.00 3.53
3009 3100 1.799917 CGACCACAATTGCATGCATCC 60.800 52.381 23.37 3.92 0.00 3.51
3011 3102 0.889994 ACGACCACAATTGCATGCAT 59.110 45.000 23.37 4.18 0.00 3.96
3013 3104 0.523072 AGACGACCACAATTGCATGC 59.477 50.000 11.82 11.82 0.00 4.06
3014 3105 1.536766 ACAGACGACCACAATTGCATG 59.463 47.619 5.05 0.00 0.00 4.06
3015 3106 1.896220 ACAGACGACCACAATTGCAT 58.104 45.000 5.05 0.00 0.00 3.96
3020 3111 1.497991 CACGAACAGACGACCACAAT 58.502 50.000 0.00 0.00 37.03 2.71
3023 3114 1.276145 GAGCACGAACAGACGACCAC 61.276 60.000 0.00 0.00 37.03 4.16
3025 3116 1.733399 GGAGCACGAACAGACGACC 60.733 63.158 0.00 0.00 37.03 4.79
3026 3117 1.733399 GGGAGCACGAACAGACGAC 60.733 63.158 0.00 0.00 37.03 4.34
3028 3119 2.022129 GTGGGAGCACGAACAGACG 61.022 63.158 0.00 0.00 39.31 4.18
3029 3120 1.069090 TGTGGGAGCACGAACAGAC 59.931 57.895 0.00 0.00 0.00 3.51
3031 3122 1.961277 GGTGTGGGAGCACGAACAG 60.961 63.158 0.00 0.00 40.08 3.16
3032 3123 2.110213 GGTGTGGGAGCACGAACA 59.890 61.111 0.00 0.00 40.08 3.18
3033 3124 1.525077 TTGGTGTGGGAGCACGAAC 60.525 57.895 0.00 0.00 40.08 3.95
3034 3125 1.525077 GTTGGTGTGGGAGCACGAA 60.525 57.895 0.00 0.00 40.08 3.85
3035 3126 2.110213 GTTGGTGTGGGAGCACGA 59.890 61.111 0.00 0.00 40.08 4.35
3036 3127 3.345808 CGTTGGTGTGGGAGCACG 61.346 66.667 0.00 0.00 40.08 5.34
3038 3129 2.110213 GTCGTTGGTGTGGGAGCA 59.890 61.111 0.00 0.00 0.00 4.26
3039 3130 2.668550 GGTCGTTGGTGTGGGAGC 60.669 66.667 0.00 0.00 0.00 4.70
3041 3132 2.768769 TGGGTCGTTGGTGTGGGA 60.769 61.111 0.00 0.00 0.00 4.37
3042 3133 2.281484 CTGGGTCGTTGGTGTGGG 60.281 66.667 0.00 0.00 0.00 4.61
3043 3134 1.597027 GACTGGGTCGTTGGTGTGG 60.597 63.158 0.00 0.00 0.00 4.17
3044 3135 0.250295 ATGACTGGGTCGTTGGTGTG 60.250 55.000 0.00 0.00 34.95 3.82
3046 3137 1.014044 CGATGACTGGGTCGTTGGTG 61.014 60.000 0.00 0.00 34.95 4.17
3048 3139 4.185413 CGATGACTGGGTCGTTGG 57.815 61.111 0.00 0.00 34.95 3.77
3052 3143 0.179134 GGAAGACGATGACTGGGTCG 60.179 60.000 0.00 0.00 43.13 4.79
3053 3144 0.895530 TGGAAGACGATGACTGGGTC 59.104 55.000 0.00 0.00 0.00 4.46
3054 3145 1.573108 ATGGAAGACGATGACTGGGT 58.427 50.000 0.00 0.00 0.00 4.51
3056 3147 3.569548 CGATATGGAAGACGATGACTGG 58.430 50.000 0.00 0.00 0.00 4.00
3057 3148 3.253432 TCCGATATGGAAGACGATGACTG 59.747 47.826 0.00 0.00 46.38 3.51
3059 3150 3.917329 TCCGATATGGAAGACGATGAC 57.083 47.619 0.00 0.00 46.38 3.06
3070 3161 2.357517 GCCCGTGCTCCGATATGG 60.358 66.667 0.00 0.00 39.56 2.74
3071 3162 2.357517 GGCCCGTGCTCCGATATG 60.358 66.667 0.00 0.00 39.56 1.78
3072 3163 2.524394 AGGCCCGTGCTCCGATAT 60.524 61.111 0.00 0.00 39.56 1.63
3079 3170 4.335647 CTTGTGGAGGCCCGTGCT 62.336 66.667 0.00 0.00 37.74 4.40
3081 3172 4.641645 TGCTTGTGGAGGCCCGTG 62.642 66.667 0.00 0.00 34.29 4.94
3082 3173 4.335647 CTGCTTGTGGAGGCCCGT 62.336 66.667 0.00 0.00 34.29 5.28
3084 3175 4.357279 AGCTGCTTGTGGAGGCCC 62.357 66.667 0.00 0.00 31.89 5.80
3085 3176 2.749441 GAGCTGCTTGTGGAGGCC 60.749 66.667 2.53 0.00 31.89 5.19
3086 3177 2.033141 TGAGCTGCTTGTGGAGGC 59.967 61.111 2.53 0.00 31.89 4.70
3087 3178 1.071987 TGTGAGCTGCTTGTGGAGG 59.928 57.895 2.53 0.00 31.89 4.30
3088 3179 0.533531 TGTGTGAGCTGCTTGTGGAG 60.534 55.000 2.53 0.00 34.56 3.86
3089 3180 0.107263 TTGTGTGAGCTGCTTGTGGA 60.107 50.000 2.53 0.00 0.00 4.02
3090 3181 0.029834 GTTGTGTGAGCTGCTTGTGG 59.970 55.000 2.53 0.00 0.00 4.17
3091 3182 0.734309 TGTTGTGTGAGCTGCTTGTG 59.266 50.000 2.53 0.00 0.00 3.33
3092 3183 1.335810 CATGTTGTGTGAGCTGCTTGT 59.664 47.619 2.53 0.00 0.00 3.16
3093 3184 1.605232 TCATGTTGTGTGAGCTGCTTG 59.395 47.619 2.53 0.00 0.00 4.01
3094 3185 1.971481 TCATGTTGTGTGAGCTGCTT 58.029 45.000 2.53 0.00 0.00 3.91
3096 3187 2.223203 GCTATCATGTTGTGTGAGCTGC 60.223 50.000 0.00 0.00 35.29 5.25
3097 3188 3.004862 TGCTATCATGTTGTGTGAGCTG 58.995 45.455 0.00 0.00 37.45 4.24
3099 3190 3.003068 GGATGCTATCATGTTGTGTGAGC 59.997 47.826 0.00 0.00 37.24 4.26
3100 3191 3.562973 GGGATGCTATCATGTTGTGTGAG 59.437 47.826 0.00 0.00 31.96 3.51
3102 3193 2.288729 CGGGATGCTATCATGTTGTGTG 59.711 50.000 0.00 0.00 31.96 3.82
3103 3194 2.170397 TCGGGATGCTATCATGTTGTGT 59.830 45.455 0.00 0.00 31.96 3.72
3104 3195 2.545526 GTCGGGATGCTATCATGTTGTG 59.454 50.000 0.00 0.00 31.96 3.33
3105 3196 2.803133 CGTCGGGATGCTATCATGTTGT 60.803 50.000 0.00 0.00 31.96 3.32
3106 3197 1.794701 CGTCGGGATGCTATCATGTTG 59.205 52.381 0.00 0.00 31.96 3.33
3108 3199 0.318441 CCGTCGGGATGCTATCATGT 59.682 55.000 2.34 0.00 34.06 3.21
3109 3200 1.016130 GCCGTCGGGATGCTATCATG 61.016 60.000 14.38 0.00 34.06 3.07
3110 3201 1.293498 GCCGTCGGGATGCTATCAT 59.707 57.895 14.38 0.00 34.06 2.45
3111 3202 2.131067 TGCCGTCGGGATGCTATCA 61.131 57.895 14.38 0.00 34.06 2.15
3112 3203 1.664965 GTGCCGTCGGGATGCTATC 60.665 63.158 14.38 0.00 34.06 2.08
3113 3204 2.421739 GTGCCGTCGGGATGCTAT 59.578 61.111 14.38 0.00 34.06 2.97
3117 3208 2.978452 GATCTGGTGCCGTCGGGATG 62.978 65.000 14.38 5.29 34.06 3.51
3118 3209 2.764128 ATCTGGTGCCGTCGGGAT 60.764 61.111 14.38 3.70 34.06 3.85
3120 3211 4.873129 CGATCTGGTGCCGTCGGG 62.873 72.222 14.38 0.00 0.00 5.14
3121 3212 4.873129 CCGATCTGGTGCCGTCGG 62.873 72.222 6.99 6.99 46.26 4.79
3122 3213 3.758088 CTCCGATCTGGTGCCGTCG 62.758 68.421 3.97 4.31 39.52 5.12
3123 3214 2.105128 CTCCGATCTGGTGCCGTC 59.895 66.667 3.97 0.00 39.52 4.79
3137 3228 3.941657 GACACTCTGGCGGTGCTCC 62.942 68.421 0.00 0.00 38.14 4.70
3138 3229 2.433318 GACACTCTGGCGGTGCTC 60.433 66.667 0.00 0.00 38.14 4.26
3149 3240 2.251642 AAACCAAGCGGCGACACTC 61.252 57.895 12.98 0.00 34.57 3.51
3150 3241 2.203153 AAACCAAGCGGCGACACT 60.203 55.556 12.98 0.00 34.57 3.55
3151 3242 2.051345 CAAACCAAGCGGCGACAC 60.051 61.111 12.98 0.00 34.57 3.67
3157 3248 1.950630 GTTGCTGCAAACCAAGCGG 60.951 57.895 17.80 0.00 41.29 5.52
3158 3249 2.295052 CGTTGCTGCAAACCAAGCG 61.295 57.895 17.80 11.31 33.85 4.68
3159 3250 1.950630 CCGTTGCTGCAAACCAAGC 60.951 57.895 17.80 2.41 0.00 4.01
3160 3251 1.950630 GCCGTTGCTGCAAACCAAG 60.951 57.895 17.80 5.43 33.53 3.61
3161 3252 2.105930 GCCGTTGCTGCAAACCAA 59.894 55.556 17.80 0.00 33.53 3.67
3162 3253 2.967507 TAGGCCGTTGCTGCAAACCA 62.968 55.000 23.88 12.52 37.74 3.67
3163 3254 2.200170 CTAGGCCGTTGCTGCAAACC 62.200 60.000 17.80 17.81 37.74 3.27
3164 3255 1.210155 CTAGGCCGTTGCTGCAAAC 59.790 57.895 17.80 9.52 37.74 2.93
3165 3256 2.625823 GCTAGGCCGTTGCTGCAAA 61.626 57.895 17.80 0.00 37.74 3.68
3166 3257 3.055719 GCTAGGCCGTTGCTGCAA 61.056 61.111 11.69 11.69 37.74 4.08
3169 3260 3.503363 GCTGCTAGGCCGTTGCTG 61.503 66.667 16.22 16.06 37.74 4.41
3171 3262 3.804193 GTGCTGCTAGGCCGTTGC 61.804 66.667 10.08 10.08 0.00 4.17
3173 3264 4.760047 CCGTGCTGCTAGGCCGTT 62.760 66.667 0.00 0.00 0.00 4.44
3227 5683 1.226379 CGGACAATGTTGCGATGGC 60.226 57.895 0.00 0.00 40.52 4.40
3233 5689 0.727398 GGCTACTCGGACAATGTTGC 59.273 55.000 0.00 0.00 33.17 4.17
3234 5690 0.999406 CGGCTACTCGGACAATGTTG 59.001 55.000 0.00 0.00 0.00 3.33
3237 5693 0.456221 ACTCGGCTACTCGGACAATG 59.544 55.000 0.00 0.00 0.00 2.82
3242 5698 3.200593 GCGACTCGGCTACTCGGA 61.201 66.667 0.00 0.00 0.00 4.55
3252 5708 4.717629 TGCTTGGACGGCGACTCG 62.718 66.667 16.62 1.15 0.00 4.18
3253 5709 3.112709 GTGCTTGGACGGCGACTC 61.113 66.667 16.62 0.10 0.00 3.36
3254 5710 4.681978 GGTGCTTGGACGGCGACT 62.682 66.667 16.62 0.00 0.00 4.18
3278 5734 2.281070 AACAGTGAGGCCGTGCTG 60.281 61.111 17.74 17.74 35.31 4.41
3281 5737 2.186160 TTGCAACAGTGAGGCCGTG 61.186 57.895 0.00 0.00 0.00 4.94
3282 5738 2.186826 GTTGCAACAGTGAGGCCGT 61.187 57.895 24.52 0.00 0.00 5.68
3283 5739 1.518056 ATGTTGCAACAGTGAGGCCG 61.518 55.000 33.44 0.00 43.04 6.13
3285 5741 0.953727 TGATGTTGCAACAGTGAGGC 59.046 50.000 33.44 19.11 43.04 4.70
3286 5742 1.267806 GGTGATGTTGCAACAGTGAGG 59.732 52.381 33.44 0.00 43.04 3.86
3287 5743 1.069703 CGGTGATGTTGCAACAGTGAG 60.070 52.381 33.44 20.41 43.04 3.51
3289 5745 0.040157 CCGGTGATGTTGCAACAGTG 60.040 55.000 33.44 20.81 43.04 3.66
3290 5746 0.179032 TCCGGTGATGTTGCAACAGT 60.179 50.000 33.44 22.40 43.04 3.55
3291 5747 0.518636 CTCCGGTGATGTTGCAACAG 59.481 55.000 33.44 20.78 43.04 3.16
3292 5748 1.514678 GCTCCGGTGATGTTGCAACA 61.515 55.000 32.78 32.78 44.06 3.33
3293 5749 1.210155 GCTCCGGTGATGTTGCAAC 59.790 57.895 22.83 22.83 0.00 4.17
3294 5750 1.228094 TGCTCCGGTGATGTTGCAA 60.228 52.632 7.92 0.00 0.00 4.08
3295 5751 1.672030 CTGCTCCGGTGATGTTGCA 60.672 57.895 7.92 4.63 0.00 4.08
3296 5752 3.044059 GCTGCTCCGGTGATGTTGC 62.044 63.158 7.92 0.00 0.00 4.17
3298 5754 1.078848 GAGCTGCTCCGGTGATGTT 60.079 57.895 18.80 0.00 0.00 2.71
3300 5756 2.584418 CGAGCTGCTCCGGTGATG 60.584 66.667 22.97 4.17 0.00 3.07
3301 5757 2.755876 TCGAGCTGCTCCGGTGAT 60.756 61.111 22.97 0.00 0.00 3.06
3302 5758 3.443925 CTCGAGCTGCTCCGGTGA 61.444 66.667 22.97 13.39 0.00 4.02
3323 5779 3.782244 GCTCAACTGCTGCGACGG 61.782 66.667 0.00 0.00 0.00 4.79
3324 5780 3.782244 GGCTCAACTGCTGCGACG 61.782 66.667 0.00 0.00 0.00 5.12
3325 5781 1.975363 GATGGCTCAACTGCTGCGAC 61.975 60.000 0.00 0.00 0.00 5.19
3326 5782 1.742880 GATGGCTCAACTGCTGCGA 60.743 57.895 0.00 0.00 0.00 5.10
3328 5784 1.975363 GACGATGGCTCAACTGCTGC 61.975 60.000 0.00 0.00 0.00 5.25
3329 5785 1.690283 CGACGATGGCTCAACTGCTG 61.690 60.000 0.00 0.00 0.00 4.41
3330 5786 1.446792 CGACGATGGCTCAACTGCT 60.447 57.895 0.00 0.00 0.00 4.24
3332 5788 1.690283 CTGCGACGATGGCTCAACTG 61.690 60.000 0.00 0.00 0.00 3.16
3333 5789 1.446792 CTGCGACGATGGCTCAACT 60.447 57.895 0.00 0.00 0.00 3.16
3334 5790 3.084579 CTGCGACGATGGCTCAAC 58.915 61.111 0.00 0.00 0.00 3.18
3335 5791 2.815211 GCTGCGACGATGGCTCAA 60.815 61.111 0.00 0.00 0.00 3.02
3337 5793 2.176273 AATGCTGCGACGATGGCTC 61.176 57.895 0.00 0.00 0.00 4.70
3338 5794 2.124983 AATGCTGCGACGATGGCT 60.125 55.556 0.00 0.00 0.00 4.75
3339 5795 2.023741 CAATGCTGCGACGATGGC 59.976 61.111 0.00 0.00 0.00 4.40
3340 5796 1.647545 AACCAATGCTGCGACGATGG 61.648 55.000 0.00 1.49 0.00 3.51
3341 5797 0.247814 GAACCAATGCTGCGACGATG 60.248 55.000 0.00 0.00 0.00 3.84
3342 5798 0.673333 TGAACCAATGCTGCGACGAT 60.673 50.000 0.00 0.00 0.00 3.73
3343 5799 1.301322 TGAACCAATGCTGCGACGA 60.301 52.632 0.00 0.00 0.00 4.20
3344 5800 1.154413 GTGAACCAATGCTGCGACG 60.154 57.895 0.00 0.00 0.00 5.12
3345 5801 0.110056 CTGTGAACCAATGCTGCGAC 60.110 55.000 0.00 0.00 0.00 5.19
3346 5802 1.855213 GCTGTGAACCAATGCTGCGA 61.855 55.000 0.00 0.00 0.00 5.10
3347 5803 1.443194 GCTGTGAACCAATGCTGCG 60.443 57.895 0.00 0.00 0.00 5.18
3348 5804 1.443194 CGCTGTGAACCAATGCTGC 60.443 57.895 0.00 0.00 0.00 5.25
3349 5805 1.443194 GCGCTGTGAACCAATGCTG 60.443 57.895 0.00 0.00 0.00 4.41
3350 5806 2.956987 GCGCTGTGAACCAATGCT 59.043 55.556 0.00 0.00 0.00 3.79
3351 5807 2.502510 CGCGCTGTGAACCAATGC 60.503 61.111 5.56 0.00 0.00 3.56
3352 5808 2.176546 CCGCGCTGTGAACCAATG 59.823 61.111 5.56 0.00 0.00 2.82
3353 5809 3.737172 GCCGCGCTGTGAACCAAT 61.737 61.111 5.56 0.00 0.00 3.16
3381 5837 3.344215 GATGCTCCGGCGATGCTG 61.344 66.667 9.30 0.00 42.25 4.41
3382 5838 4.615815 GGATGCTCCGGCGATGCT 62.616 66.667 9.30 2.25 42.25 3.79
3384 5840 4.996434 GGGGATGCTCCGGCGATG 62.996 72.222 9.30 0.80 42.25 3.84
3392 5848 4.593864 GACGGCTCGGGGATGCTC 62.594 72.222 0.00 0.00 0.00 4.26
3395 5851 4.570663 GACGACGGCTCGGGGATG 62.571 72.222 0.00 0.00 44.80 3.51
3423 5879 1.941476 GACGATGTTGCGACGGTGAC 61.941 60.000 0.00 0.00 34.83 3.67
3424 5880 1.731613 GACGATGTTGCGACGGTGA 60.732 57.895 0.00 0.00 34.83 4.02
3425 5881 2.769617 GACGATGTTGCGACGGTG 59.230 61.111 0.00 0.00 34.83 4.94
3426 5882 2.803670 CGACGATGTTGCGACGGT 60.804 61.111 0.00 0.00 43.43 4.83
3428 5884 2.497092 CTCCGACGATGTTGCGACG 61.497 63.158 0.00 0.00 45.82 5.12
3429 5885 2.789203 GCTCCGACGATGTTGCGAC 61.789 63.158 0.00 0.00 34.83 5.19
3430 5886 2.506217 GCTCCGACGATGTTGCGA 60.506 61.111 0.00 0.00 34.83 5.10
3431 5887 2.792290 CTGCTCCGACGATGTTGCG 61.792 63.158 0.00 0.00 37.29 4.85
3432 5888 3.084579 CTGCTCCGACGATGTTGC 58.915 61.111 0.00 0.00 0.00 4.17
3433 5889 1.416813 GAGCTGCTCCGACGATGTTG 61.417 60.000 18.80 0.00 0.00 3.33
3434 5890 1.153745 GAGCTGCTCCGACGATGTT 60.154 57.895 18.80 0.00 0.00 2.71
3435 5891 2.492090 GAGCTGCTCCGACGATGT 59.508 61.111 18.80 0.00 0.00 3.06
3436 5892 2.653448 CGAGCTGCTCCGACGATG 60.653 66.667 22.97 4.17 0.00 3.84
3437 5893 2.824489 TCGAGCTGCTCCGACGAT 60.824 61.111 22.97 0.00 0.00 3.73
3438 5894 3.500642 CTCGAGCTGCTCCGACGA 61.501 66.667 22.97 16.14 0.00 4.20
3440 5896 4.863925 GGCTCGAGCTGCTCCGAC 62.864 72.222 34.46 13.48 41.70 4.79
3449 5905 4.221422 TATGGTGGCGGCTCGAGC 62.221 66.667 29.38 29.38 41.14 5.03
3450 5906 2.028190 CTATGGTGGCGGCTCGAG 59.972 66.667 11.43 8.45 0.00 4.04
3451 5907 4.221422 GCTATGGTGGCGGCTCGA 62.221 66.667 11.43 3.98 0.00 4.04
3452 5908 3.814615 ATGCTATGGTGGCGGCTCG 62.815 63.158 11.43 0.00 0.00 5.03
3453 5909 1.963338 GATGCTATGGTGGCGGCTC 60.963 63.158 11.43 6.49 0.00 4.70
3454 5910 2.111878 GATGCTATGGTGGCGGCT 59.888 61.111 11.43 0.00 0.00 5.52
3455 5911 3.349006 CGATGCTATGGTGGCGGC 61.349 66.667 0.00 0.00 0.00 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.