Multiple sequence alignment - TraesCS4B01G229800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G229800 chr4B 100.000 3298 0 0 1 3298 480836343 480833046 0.000000e+00 6091.0
1 TraesCS4B01G229800 chr4B 87.761 335 26 5 2704 3023 604681539 604681205 8.640000e-101 377.0
2 TraesCS4B01G229800 chr4D 95.520 1518 47 5 835 2339 391027677 391026168 0.000000e+00 2407.0
3 TraesCS4B01G229800 chr4D 93.333 615 38 2 1 615 391029813 391029202 0.000000e+00 905.0
4 TraesCS4B01G229800 chr4D 95.455 132 6 0 714 845 391029210 391029079 9.270000e-51 211.0
5 TraesCS4B01G229800 chr4D 88.732 71 6 2 3202 3271 37602668 37602599 5.860000e-13 86.1
6 TraesCS4B01G229800 chr4A 93.434 1127 71 3 1582 2706 72880644 72879519 0.000000e+00 1668.0
7 TraesCS4B01G229800 chr4A 93.127 873 45 3 716 1588 72917134 72916277 0.000000e+00 1266.0
8 TraesCS4B01G229800 chr4A 87.719 399 34 3 2703 3086 67742524 67742126 5.020000e-123 451.0
9 TraesCS4B01G229800 chr4A 87.668 373 43 3 2707 3077 581473647 581473276 6.540000e-117 431.0
10 TraesCS4B01G229800 chr4A 87.433 374 32 2 2707 3065 452471132 452470759 1.830000e-112 416.0
11 TraesCS4B01G229800 chr4A 90.506 158 14 1 2705 2861 96322567 96322410 1.200000e-49 207.0
12 TraesCS4B01G229800 chr4A 90.625 96 9 0 8 103 694624184 694624089 9.610000e-26 128.0
13 TraesCS4B01G229800 chr5D 90.959 365 32 1 2342 2706 556930119 556929756 1.060000e-134 490.0
14 TraesCS4B01G229800 chr5D 89.203 389 28 2 2707 3081 468847045 468846657 1.070000e-129 473.0
15 TraesCS4B01G229800 chr7B 85.867 467 35 15 92 558 599277663 599278098 4.980000e-128 468.0
16 TraesCS4B01G229800 chr7B 81.731 104 6 5 455 558 599261945 599262035 1.270000e-09 75.0
17 TraesCS4B01G229800 chr1B 88.250 400 31 7 2701 3085 376055475 376055077 6.450000e-127 464.0
18 TraesCS4B01G229800 chr1B 86.902 397 35 4 2707 3087 9041929 9041534 2.350000e-116 429.0
19 TraesCS4B01G229800 chr1B 84.141 227 21 4 2702 2913 611407340 611407566 4.310000e-49 206.0
20 TraesCS4B01G229800 chr2B 77.628 818 146 26 1510 2298 726130597 726131406 2.320000e-126 462.0
21 TraesCS4B01G229800 chr2B 87.121 396 36 7 2707 3087 764348863 764348468 5.050000e-118 435.0
22 TraesCS4B01G229800 chr2B 87.245 392 33 2 2704 3081 117876276 117876664 6.540000e-117 431.0
23 TraesCS4B01G229800 chr2B 79.109 359 67 5 1027 1378 726130056 726130413 1.180000e-59 241.0
24 TraesCS4B01G229800 chr7A 88.071 394 32 2 2707 3085 108223467 108223074 1.400000e-123 453.0
25 TraesCS4B01G229800 chr7A 87.909 397 33 2 2705 3086 695106416 695106812 1.400000e-123 453.0
26 TraesCS4B01G229800 chr7A 90.566 106 4 1 614 713 27034785 27034890 5.740000e-28 135.0
27 TraesCS4B01G229800 chr6B 87.342 395 36 2 2707 3087 261730786 261730392 1.090000e-119 440.0
28 TraesCS4B01G229800 chr6B 90.476 315 27 3 2341 2653 661570320 661570633 2.370000e-111 412.0
29 TraesCS4B01G229800 chr6B 90.159 315 28 3 2341 2653 661711389 661711702 1.100000e-109 407.0
30 TraesCS4B01G229800 chr6B 86.916 107 8 1 3192 3298 661578274 661578374 7.480000e-22 115.0
31 TraesCS4B01G229800 chr6B 86.364 110 8 2 3190 3298 661719334 661719437 2.690000e-21 113.0
32 TraesCS4B01G229800 chr3B 90.202 347 20 1 2712 3044 349936145 349935799 1.090000e-119 440.0
33 TraesCS4B01G229800 chr3B 88.073 109 6 2 615 716 617414719 617414611 4.470000e-24 122.0
34 TraesCS4B01G229800 chr3B 87.736 106 7 1 615 714 383720189 383720084 5.780000e-23 119.0
35 TraesCS4B01G229800 chr1A 87.342 395 35 6 2705 3085 141289057 141288664 3.910000e-119 438.0
36 TraesCS4B01G229800 chr1A 87.500 104 7 3 616 713 577464953 577465056 7.480000e-22 115.0
37 TraesCS4B01G229800 chr2A 78.287 677 116 17 1510 2157 731374160 731374834 1.100000e-109 407.0
38 TraesCS4B01G229800 chr2A 79.135 393 67 11 996 1378 731373659 731374046 1.170000e-64 257.0
39 TraesCS4B01G229800 chr2A 91.111 90 2 3 615 698 723513390 723513301 2.080000e-22 117.0
40 TraesCS4B01G229800 chr2A 80.000 135 26 1 2342 2476 753678570 753678437 7.530000e-17 99.0
41 TraesCS4B01G229800 chr6A 88.976 127 7 2 608 727 239427741 239427615 2.050000e-32 150.0
42 TraesCS4B01G229800 chr6A 80.741 135 25 1 2342 2476 592706020 592706153 1.620000e-18 104.0
43 TraesCS4B01G229800 chr3D 86.957 92 12 0 2342 2433 532156523 532156614 1.620000e-18 104.0
44 TraesCS4B01G229800 chr5B 86.667 90 12 0 732 821 388167171 388167260 2.090000e-17 100.0
45 TraesCS4B01G229800 chr5B 85.263 95 12 2 2340 2433 39774997 39775090 2.710000e-16 97.1
46 TraesCS4B01G229800 chr5A 79.856 139 27 1 2338 2476 40268108 40267971 2.090000e-17 100.0
47 TraesCS4B01G229800 chr6D 80.952 105 12 4 3195 3298 453317434 453317337 3.530000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G229800 chr4B 480833046 480836343 3297 True 6091.000000 6091 100.000000 1 3298 1 chr4B.!!$R1 3297
1 TraesCS4B01G229800 chr4D 391026168 391029813 3645 True 1174.333333 2407 94.769333 1 2339 3 chr4D.!!$R2 2338
2 TraesCS4B01G229800 chr4A 72879519 72880644 1125 True 1668.000000 1668 93.434000 1582 2706 1 chr4A.!!$R2 1124
3 TraesCS4B01G229800 chr4A 72916277 72917134 857 True 1266.000000 1266 93.127000 716 1588 1 chr4A.!!$R3 872
4 TraesCS4B01G229800 chr2B 726130056 726131406 1350 False 351.500000 462 78.368500 1027 2298 2 chr2B.!!$F2 1271
5 TraesCS4B01G229800 chr2A 731373659 731374834 1175 False 332.000000 407 78.711000 996 2157 2 chr2A.!!$F1 1161

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
388 389 0.105760 AGCGGATCTGTGAGGGAGAT 60.106 55.0 2.89 0.00 32.63 2.75 F
938 2351 0.109272 ACACCACGTACGCATCTCAG 60.109 55.0 16.72 1.66 0.00 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1281 2700 0.323087 AATCCACCCAAACGCCTACC 60.323 55.0 0.00 0.0 0.0 3.18 R
2702 4269 0.036306 CTGTCAAACGGGGCCTTACT 59.964 55.0 0.84 0.0 0.0 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.287668 GGAGATTACCATGAGGACGACG 60.288 54.545 0.00 0.00 38.69 5.12
68 69 4.710167 GGGCCCGCGTTACCAAGT 62.710 66.667 5.69 0.00 0.00 3.16
110 111 2.100631 CGTCGCTCCACATCCAACC 61.101 63.158 0.00 0.00 0.00 3.77
133 134 3.461061 CTCCATCGCTCACATACAACAT 58.539 45.455 0.00 0.00 0.00 2.71
147 148 3.282745 AACATCGGCGCACGTCTCT 62.283 57.895 10.83 0.00 44.69 3.10
150 151 3.282745 ATCGGCGCACGTCTCTGTT 62.283 57.895 10.83 0.00 44.69 3.16
169 170 2.229675 TGCATAGAAGCTCATCACCG 57.770 50.000 0.00 0.00 34.99 4.94
174 175 4.393155 AAGCTCATCACCGGCGCA 62.393 61.111 10.83 0.00 0.00 6.09
209 210 2.104111 ACTTTTCACCATCGGACTCACA 59.896 45.455 0.00 0.00 0.00 3.58
225 226 0.108662 CACAGGCGCATGTAGACTGA 60.109 55.000 28.77 0.00 33.57 3.41
268 269 0.253020 GGGGTAGTGGGGAGAAAGGA 60.253 60.000 0.00 0.00 0.00 3.36
305 306 1.585006 GCGACGTCAAGAGGGAGAA 59.415 57.895 17.16 0.00 0.00 2.87
322 323 4.488911 AGCAGAGGGGAGGCCGAT 62.489 66.667 0.00 0.00 0.00 4.18
324 325 4.247380 CAGAGGGGAGGCCGATGC 62.247 72.222 0.00 0.00 0.00 3.91
334 335 2.334653 GCCGATGCCGAGAGAGAG 59.665 66.667 0.00 0.00 38.22 3.20
335 336 2.190170 GCCGATGCCGAGAGAGAGA 61.190 63.158 0.00 0.00 38.22 3.10
388 389 0.105760 AGCGGATCTGTGAGGGAGAT 60.106 55.000 2.89 0.00 32.63 2.75
392 393 1.543802 GGATCTGTGAGGGAGATAGCG 59.456 57.143 0.00 0.00 29.97 4.26
393 394 1.543802 GATCTGTGAGGGAGATAGCGG 59.456 57.143 0.00 0.00 29.97 5.52
427 428 4.742201 GCCGCTGGAGAACGAGCA 62.742 66.667 0.00 0.00 45.75 4.26
435 436 0.390472 GGAGAACGAGCAAGTGGGAG 60.390 60.000 0.00 0.00 0.00 4.30
452 453 0.664767 GAGTGGTGCGAGTGTGAGTC 60.665 60.000 0.00 0.00 0.00 3.36
465 466 4.803426 GAGTCAGCGAGCGGTGGG 62.803 72.222 20.02 0.00 43.10 4.61
482 483 2.105649 GTGGGAGGGCAATTTTGGAAAA 59.894 45.455 0.00 0.00 0.00 2.29
539 540 5.161943 AGGAAAGCTTAAACGACCTACAT 57.838 39.130 0.00 0.00 0.00 2.29
543 544 5.526010 AAGCTTAAACGACCTACATTTCG 57.474 39.130 0.00 0.00 41.14 3.46
544 545 4.813027 AGCTTAAACGACCTACATTTCGA 58.187 39.130 0.00 0.00 38.63 3.71
570 571 0.461516 GGGAGTAGCAGTTTACCCGC 60.462 60.000 0.00 0.00 0.00 6.13
571 572 0.804933 GGAGTAGCAGTTTACCCGCG 60.805 60.000 0.00 0.00 0.00 6.46
573 574 0.172803 AGTAGCAGTTTACCCGCGAG 59.827 55.000 8.23 0.00 0.00 5.03
626 627 4.951963 CGCCTCGGAGCCGGATTC 62.952 72.222 5.05 0.00 40.25 2.52
627 628 4.610714 GCCTCGGAGCCGGATTCC 62.611 72.222 5.05 10.87 40.25 3.01
628 629 3.930012 CCTCGGAGCCGGATTCCC 61.930 72.222 5.05 0.00 40.25 3.97
629 630 2.840102 CTCGGAGCCGGATTCCCT 60.840 66.667 5.05 0.00 40.25 4.20
630 631 3.154473 TCGGAGCCGGATTCCCTG 61.154 66.667 5.05 0.00 40.25 4.45
631 632 3.154473 CGGAGCCGGATTCCCTGA 61.154 66.667 5.05 0.00 35.56 3.86
632 633 2.506472 GGAGCCGGATTCCCTGAC 59.494 66.667 5.05 0.00 0.00 3.51
633 634 2.107141 GAGCCGGATTCCCTGACG 59.893 66.667 5.05 0.00 0.00 4.35
634 635 2.683933 AGCCGGATTCCCTGACGT 60.684 61.111 5.05 0.00 0.00 4.34
635 636 1.380785 AGCCGGATTCCCTGACGTA 60.381 57.895 5.05 0.00 0.00 3.57
636 637 1.227176 GCCGGATTCCCTGACGTAC 60.227 63.158 5.05 0.00 0.00 3.67
637 638 1.065273 CCGGATTCCCTGACGTACG 59.935 63.158 15.01 15.01 0.00 3.67
638 639 1.065273 CGGATTCCCTGACGTACGG 59.935 63.158 21.06 1.19 0.00 4.02
639 640 1.227176 GGATTCCCTGACGTACGGC 60.227 63.158 21.06 18.72 0.00 5.68
640 641 1.227176 GATTCCCTGACGTACGGCC 60.227 63.158 20.48 10.81 0.00 6.13
641 642 1.952102 GATTCCCTGACGTACGGCCA 61.952 60.000 20.48 14.99 0.00 5.36
642 643 2.234913 ATTCCCTGACGTACGGCCAC 62.235 60.000 20.48 7.80 0.00 5.01
643 644 4.446413 CCCTGACGTACGGCCACC 62.446 72.222 20.48 2.90 0.00 4.61
644 645 3.379445 CCTGACGTACGGCCACCT 61.379 66.667 20.48 0.00 0.00 4.00
645 646 2.126071 CTGACGTACGGCCACCTG 60.126 66.667 20.48 0.00 0.00 4.00
646 647 2.598099 TGACGTACGGCCACCTGA 60.598 61.111 20.48 0.00 0.00 3.86
647 648 2.126189 GACGTACGGCCACCTGAC 60.126 66.667 21.06 0.00 0.00 3.51
648 649 2.913578 ACGTACGGCCACCTGACA 60.914 61.111 21.06 0.00 0.00 3.58
649 650 2.221906 GACGTACGGCCACCTGACAT 62.222 60.000 21.06 0.00 0.00 3.06
650 651 1.079405 CGTACGGCCACCTGACATT 60.079 57.895 7.57 0.00 0.00 2.71
651 652 1.358725 CGTACGGCCACCTGACATTG 61.359 60.000 7.57 0.00 0.00 2.82
652 653 1.024579 GTACGGCCACCTGACATTGG 61.025 60.000 2.24 0.00 35.81 3.16
653 654 2.191786 TACGGCCACCTGACATTGGG 62.192 60.000 2.24 0.00 33.01 4.12
655 656 3.070576 GCCACCTGACATTGGGCC 61.071 66.667 0.00 0.00 38.70 5.80
656 657 2.440147 CCACCTGACATTGGGCCA 59.560 61.111 0.00 0.00 0.00 5.36
657 658 1.978617 CCACCTGACATTGGGCCAC 60.979 63.158 5.23 0.00 0.00 5.01
658 659 1.075482 CACCTGACATTGGGCCACT 59.925 57.895 5.23 0.00 0.00 4.00
659 660 1.075482 ACCTGACATTGGGCCACTG 59.925 57.895 21.09 21.09 0.00 3.66
660 661 1.379916 CCTGACATTGGGCCACTGA 59.620 57.895 28.30 4.66 0.00 3.41
661 662 0.962356 CCTGACATTGGGCCACTGAC 60.962 60.000 28.30 22.39 0.00 3.51
662 663 1.300971 CTGACATTGGGCCACTGACG 61.301 60.000 28.30 14.94 0.00 4.35
663 664 2.672996 ACATTGGGCCACTGACGC 60.673 61.111 28.30 0.00 0.00 5.19
664 665 3.803082 CATTGGGCCACTGACGCG 61.803 66.667 18.34 3.53 0.00 6.01
665 666 4.329545 ATTGGGCCACTGACGCGT 62.330 61.111 13.85 13.85 0.00 6.01
672 673 4.293648 CACTGACGCGTGGGTCCA 62.294 66.667 20.70 7.00 36.07 4.02
673 674 4.295119 ACTGACGCGTGGGTCCAC 62.295 66.667 20.70 9.96 43.01 4.02
674 675 4.293648 CTGACGCGTGGGTCCACA 62.294 66.667 20.70 5.23 46.47 4.17
675 676 4.595538 TGACGCGTGGGTCCACAC 62.596 66.667 20.70 9.24 46.47 3.82
681 682 2.665185 GTGGGTCCACACGTCAGC 60.665 66.667 14.69 0.00 45.53 4.26
682 683 4.293648 TGGGTCCACACGTCAGCG 62.294 66.667 0.00 0.00 44.93 5.18
683 684 3.986006 GGGTCCACACGTCAGCGA 61.986 66.667 0.00 0.00 42.00 4.93
684 685 2.430921 GGTCCACACGTCAGCGAG 60.431 66.667 0.00 0.00 42.00 5.03
685 686 2.335369 GTCCACACGTCAGCGAGT 59.665 61.111 0.00 0.00 42.28 4.18
690 691 3.406361 CACGTCAGCGAGTGTGCC 61.406 66.667 0.00 0.00 42.00 5.01
693 694 2.257371 GTCAGCGAGTGTGCCGTA 59.743 61.111 0.00 0.00 34.65 4.02
694 695 2.087009 GTCAGCGAGTGTGCCGTAC 61.087 63.158 0.00 0.00 34.65 3.67
695 696 3.172575 CAGCGAGTGTGCCGTACG 61.173 66.667 8.69 8.69 34.65 3.67
696 697 3.667282 AGCGAGTGTGCCGTACGT 61.667 61.111 15.21 0.00 34.65 3.57
697 698 2.732094 GCGAGTGTGCCGTACGTT 60.732 61.111 15.21 0.00 0.00 3.99
698 699 1.442520 GCGAGTGTGCCGTACGTTA 60.443 57.895 15.21 0.00 0.00 3.18
699 700 1.400990 GCGAGTGTGCCGTACGTTAG 61.401 60.000 15.21 0.00 0.00 2.34
700 701 0.166597 CGAGTGTGCCGTACGTTAGA 59.833 55.000 15.21 0.00 0.00 2.10
701 702 1.789410 CGAGTGTGCCGTACGTTAGAG 60.789 57.143 15.21 0.00 0.00 2.43
702 703 0.524862 AGTGTGCCGTACGTTAGAGG 59.475 55.000 15.21 0.00 0.00 3.69
703 704 0.523072 GTGTGCCGTACGTTAGAGGA 59.477 55.000 15.21 0.00 0.00 3.71
704 705 0.806868 TGTGCCGTACGTTAGAGGAG 59.193 55.000 15.21 0.00 0.00 3.69
705 706 0.525029 GTGCCGTACGTTAGAGGAGC 60.525 60.000 15.21 8.17 0.00 4.70
706 707 0.679002 TGCCGTACGTTAGAGGAGCT 60.679 55.000 15.21 0.00 0.00 4.09
707 708 0.248539 GCCGTACGTTAGAGGAGCTG 60.249 60.000 15.21 0.00 0.00 4.24
708 709 0.248539 CCGTACGTTAGAGGAGCTGC 60.249 60.000 15.21 0.00 0.00 5.25
709 710 0.248539 CGTACGTTAGAGGAGCTGCC 60.249 60.000 7.22 0.00 0.00 4.85
729 730 2.590575 CCACCGCCTCAACACGTT 60.591 61.111 0.00 0.00 0.00 3.99
751 752 4.142038 TGCTTAGGAAAAGTGGAAGGAAC 58.858 43.478 0.00 0.00 0.00 3.62
936 2349 0.109458 TCACACCACGTACGCATCTC 60.109 55.000 16.72 0.00 0.00 2.75
937 2350 0.388006 CACACCACGTACGCATCTCA 60.388 55.000 16.72 0.00 0.00 3.27
938 2351 0.109272 ACACCACGTACGCATCTCAG 60.109 55.000 16.72 1.66 0.00 3.35
939 2352 1.153823 ACCACGTACGCATCTCAGC 60.154 57.895 16.72 0.00 0.00 4.26
940 2353 1.153842 CCACGTACGCATCTCAGCA 60.154 57.895 16.72 0.00 0.00 4.41
941 2354 0.528466 CCACGTACGCATCTCAGCAT 60.528 55.000 16.72 0.00 0.00 3.79
942 2355 0.848942 CACGTACGCATCTCAGCATC 59.151 55.000 16.72 0.00 0.00 3.91
943 2356 0.741326 ACGTACGCATCTCAGCATCT 59.259 50.000 16.72 0.00 0.00 2.90
986 2399 1.227734 AGCAACACCGTACCACACC 60.228 57.895 0.00 0.00 0.00 4.16
1010 2423 2.690778 GCTGTTCCATGGACACGGC 61.691 63.158 29.05 29.05 33.79 5.68
1095 2514 1.685355 GCAACCAAACCAACCTGGCT 61.685 55.000 0.00 0.00 42.67 4.75
1114 2533 1.469335 TTTCTCCCCGCTGTCGTTCT 61.469 55.000 0.00 0.00 0.00 3.01
1323 2742 3.041469 GCTCCAGCTTAGGCCTGCT 62.041 63.158 17.99 14.48 40.54 4.24
1698 3232 1.302511 GGCGACTTCTTCTTGGCCA 60.303 57.895 0.00 0.00 40.24 5.36
1761 3295 2.203167 AGCGCATCAGCTCCCATG 60.203 61.111 11.47 0.00 45.67 3.66
1805 3351 1.520666 CTACGATTCCGGCAGGGTT 59.479 57.895 2.05 0.00 40.78 4.11
1844 3390 2.038689 CAGCATGCACATCTATCTCCCT 59.961 50.000 21.98 0.00 0.00 4.20
2317 3881 2.843113 AGTTCTGCTGCCTAGAAATCCT 59.157 45.455 4.24 0.00 36.06 3.24
2361 3927 3.228453 TGAGGTAATATCACCGGGAGTC 58.772 50.000 6.32 0.00 43.84 3.36
2374 3940 1.792949 CGGGAGTCATATAACTTGCGC 59.207 52.381 0.00 0.00 0.00 6.09
2375 3941 2.143925 GGGAGTCATATAACTTGCGCC 58.856 52.381 4.18 0.00 0.00 6.53
2377 3943 1.192534 GAGTCATATAACTTGCGCCGC 59.807 52.381 4.18 0.00 0.00 6.53
2384 3950 4.088762 ACTTGCGCCGCATGTTCG 62.089 61.111 22.86 7.85 42.78 3.95
2439 4005 7.962964 TTGTGATCACCTAACTTGACTTAAG 57.037 36.000 22.85 0.00 42.30 1.85
2441 4007 5.932303 GTGATCACCTAACTTGACTTAAGCA 59.068 40.000 15.31 0.00 40.16 3.91
2444 4010 4.695455 TCACCTAACTTGACTTAAGCATGC 59.305 41.667 10.51 10.51 40.16 4.06
2445 4011 3.684788 ACCTAACTTGACTTAAGCATGCG 59.315 43.478 13.01 0.00 40.16 4.73
2463 4029 3.642901 GGATACGATCACACTGCGT 57.357 52.632 0.00 0.00 41.58 5.24
2470 4036 1.358877 GATCACACTGCGTGTATGCA 58.641 50.000 12.73 0.00 45.65 3.96
2500 4066 2.341846 TCTTTGTGGACCCACTTGTC 57.658 50.000 18.81 0.00 46.30 3.18
2506 4072 1.880027 GTGGACCCACTTGTCAATGAC 59.120 52.381 11.73 6.41 43.12 3.06
2514 4080 1.271325 ACTTGTCAATGACCGATGGCA 60.271 47.619 11.24 0.00 0.00 4.92
2517 4083 1.552792 TGTCAATGACCGATGGCACTA 59.447 47.619 11.24 0.00 0.00 2.74
2533 4099 3.522553 GCACTAGCCTTGACGTATTCTT 58.477 45.455 0.00 0.00 33.58 2.52
2544 4110 7.043325 GCCTTGACGTATTCTTACATAGAACAG 60.043 40.741 0.00 0.00 45.33 3.16
2578 4145 2.613026 TCTGCGAAAAGAGTCAACCA 57.387 45.000 0.00 0.00 0.00 3.67
2581 4148 1.939934 TGCGAAAAGAGTCAACCACAG 59.060 47.619 0.00 0.00 0.00 3.66
2583 4150 1.070577 CGAAAAGAGTCAACCACAGCG 60.071 52.381 0.00 0.00 0.00 5.18
2585 4152 2.550830 AAAGAGTCAACCACAGCGAT 57.449 45.000 0.00 0.00 0.00 4.58
2594 4161 3.254411 TCAACCACAGCGATGCATTTTTA 59.746 39.130 0.00 0.00 0.00 1.52
2596 4163 2.176369 CCACAGCGATGCATTTTTACG 58.824 47.619 0.00 0.00 0.00 3.18
2651 4218 4.778213 ATAGGACCACAGTATTGCACAT 57.222 40.909 0.00 0.00 0.00 3.21
2653 4220 4.778213 AGGACCACAGTATTGCACATAT 57.222 40.909 0.00 0.00 0.00 1.78
2659 4226 4.156556 CCACAGTATTGCACATATATGGCC 59.843 45.833 16.96 0.00 0.00 5.36
2671 4238 9.703892 TGCACATATATGGCCAAATTTAATAAC 57.296 29.630 10.96 0.00 0.00 1.89
2678 4245 7.680442 ATGGCCAAATTTAATAACCAAACAC 57.320 32.000 10.96 0.00 0.00 3.32
2699 4266 2.096496 CCAATTGATTCAGCACGAGACC 59.904 50.000 7.12 0.00 0.00 3.85
2700 4267 2.743664 CAATTGATTCAGCACGAGACCA 59.256 45.455 0.00 0.00 0.00 4.02
2701 4268 1.795768 TTGATTCAGCACGAGACCAC 58.204 50.000 0.00 0.00 0.00 4.16
2702 4269 0.678950 TGATTCAGCACGAGACCACA 59.321 50.000 0.00 0.00 0.00 4.17
2703 4270 1.337167 TGATTCAGCACGAGACCACAG 60.337 52.381 0.00 0.00 0.00 3.66
2704 4271 0.681733 ATTCAGCACGAGACCACAGT 59.318 50.000 0.00 0.00 0.00 3.55
2705 4272 1.324383 TTCAGCACGAGACCACAGTA 58.676 50.000 0.00 0.00 0.00 2.74
2706 4273 1.324383 TCAGCACGAGACCACAGTAA 58.676 50.000 0.00 0.00 0.00 2.24
2707 4274 1.269723 TCAGCACGAGACCACAGTAAG 59.730 52.381 0.00 0.00 0.00 2.34
2708 4275 0.603569 AGCACGAGACCACAGTAAGG 59.396 55.000 0.00 0.00 0.00 2.69
2709 4276 1.014564 GCACGAGACCACAGTAAGGC 61.015 60.000 0.00 0.00 0.00 4.35
2710 4277 0.389948 CACGAGACCACAGTAAGGCC 60.390 60.000 0.00 0.00 0.00 5.19
2711 4278 1.218316 CGAGACCACAGTAAGGCCC 59.782 63.158 0.00 0.00 0.00 5.80
2712 4279 1.602771 GAGACCACAGTAAGGCCCC 59.397 63.158 0.00 0.00 0.00 5.80
2713 4280 2.240162 GAGACCACAGTAAGGCCCCG 62.240 65.000 0.00 0.00 0.00 5.73
2714 4281 2.528378 ACCACAGTAAGGCCCCGT 60.528 61.111 0.00 0.00 0.00 5.28
2715 4282 2.120737 GACCACAGTAAGGCCCCGTT 62.121 60.000 0.00 0.00 0.00 4.44
2716 4283 1.074248 CCACAGTAAGGCCCCGTTT 59.926 57.895 0.00 0.00 0.00 3.60
2717 4284 1.241315 CCACAGTAAGGCCCCGTTTG 61.241 60.000 0.00 0.00 0.00 2.93
2718 4285 0.250553 CACAGTAAGGCCCCGTTTGA 60.251 55.000 0.00 0.00 0.00 2.69
2719 4286 0.250597 ACAGTAAGGCCCCGTTTGAC 60.251 55.000 0.00 0.00 0.00 3.18
2720 4287 0.250553 CAGTAAGGCCCCGTTTGACA 60.251 55.000 0.00 0.00 0.00 3.58
2721 4288 0.036306 AGTAAGGCCCCGTTTGACAG 59.964 55.000 0.00 0.00 0.00 3.51
2722 4289 0.250597 GTAAGGCCCCGTTTGACAGT 60.251 55.000 0.00 0.00 0.00 3.55
2723 4290 1.002315 GTAAGGCCCCGTTTGACAGTA 59.998 52.381 0.00 0.00 0.00 2.74
2724 4291 0.475044 AAGGCCCCGTTTGACAGTAA 59.525 50.000 0.00 0.00 0.00 2.24
2725 4292 0.475044 AGGCCCCGTTTGACAGTAAA 59.525 50.000 0.00 0.00 0.00 2.01
2726 4293 0.879090 GGCCCCGTTTGACAGTAAAG 59.121 55.000 0.00 0.00 0.00 1.85
2727 4294 1.601166 GCCCCGTTTGACAGTAAAGT 58.399 50.000 0.00 0.00 0.00 2.66
2728 4295 2.550639 GGCCCCGTTTGACAGTAAAGTA 60.551 50.000 0.00 0.00 0.00 2.24
2729 4296 3.340928 GCCCCGTTTGACAGTAAAGTAT 58.659 45.455 0.00 0.00 0.00 2.12
2730 4297 3.754850 GCCCCGTTTGACAGTAAAGTATT 59.245 43.478 0.00 0.00 0.00 1.89
2731 4298 4.216902 GCCCCGTTTGACAGTAAAGTATTT 59.783 41.667 0.00 0.00 43.42 1.40
2732 4299 5.278610 GCCCCGTTTGACAGTAAAGTATTTT 60.279 40.000 0.00 0.00 40.09 1.82
2733 4300 6.736519 GCCCCGTTTGACAGTAAAGTATTTTT 60.737 38.462 0.00 0.00 40.09 1.94
2802 4369 6.843069 ATTTACAATGAACTGTTTGGTTGC 57.157 33.333 0.00 0.00 0.00 4.17
2803 4370 3.177997 ACAATGAACTGTTTGGTTGCC 57.822 42.857 0.00 0.00 0.00 4.52
2804 4371 2.158971 ACAATGAACTGTTTGGTTGCCC 60.159 45.455 0.00 0.00 0.00 5.36
2805 4372 1.047801 ATGAACTGTTTGGTTGCCCC 58.952 50.000 0.00 0.00 0.00 5.80
2806 4373 0.032615 TGAACTGTTTGGTTGCCCCT 60.033 50.000 0.00 0.00 0.00 4.79
2807 4374 1.215673 TGAACTGTTTGGTTGCCCCTA 59.784 47.619 0.00 0.00 0.00 3.53
2808 4375 2.312390 GAACTGTTTGGTTGCCCCTAA 58.688 47.619 0.00 0.00 0.00 2.69
2809 4376 2.463047 ACTGTTTGGTTGCCCCTAAA 57.537 45.000 0.00 0.00 29.42 1.85
2810 4377 2.753247 ACTGTTTGGTTGCCCCTAAAA 58.247 42.857 0.00 0.00 29.42 1.52
2811 4378 3.108376 ACTGTTTGGTTGCCCCTAAAAA 58.892 40.909 0.00 0.00 29.42 1.94
2812 4379 3.118555 ACTGTTTGGTTGCCCCTAAAAAC 60.119 43.478 0.00 0.00 29.42 2.43
2813 4380 3.108376 TGTTTGGTTGCCCCTAAAAACT 58.892 40.909 0.00 0.00 31.23 2.66
2814 4381 3.118592 TGTTTGGTTGCCCCTAAAAACTG 60.119 43.478 0.00 0.00 31.23 3.16
2815 4382 2.463047 TGGTTGCCCCTAAAAACTGT 57.537 45.000 0.00 0.00 0.00 3.55
2816 4383 2.035632 TGGTTGCCCCTAAAAACTGTG 58.964 47.619 0.00 0.00 0.00 3.66
2817 4384 1.270094 GGTTGCCCCTAAAAACTGTGC 60.270 52.381 0.00 0.00 0.00 4.57
2818 4385 1.686587 GTTGCCCCTAAAAACTGTGCT 59.313 47.619 0.00 0.00 0.00 4.40
2819 4386 2.080654 TGCCCCTAAAAACTGTGCTT 57.919 45.000 0.00 0.00 0.00 3.91
2820 4387 2.393646 TGCCCCTAAAAACTGTGCTTT 58.606 42.857 0.00 0.00 0.00 3.51
2821 4388 2.769095 TGCCCCTAAAAACTGTGCTTTT 59.231 40.909 0.00 0.00 0.00 2.27
2822 4389 3.961408 TGCCCCTAAAAACTGTGCTTTTA 59.039 39.130 0.00 0.00 0.00 1.52
2823 4390 4.406003 TGCCCCTAAAAACTGTGCTTTTAA 59.594 37.500 0.68 0.00 30.07 1.52
2824 4391 5.071115 TGCCCCTAAAAACTGTGCTTTTAAT 59.929 36.000 0.68 0.00 30.07 1.40
2825 4392 6.267928 TGCCCCTAAAAACTGTGCTTTTAATA 59.732 34.615 0.68 0.00 30.07 0.98
2826 4393 6.588756 GCCCCTAAAAACTGTGCTTTTAATAC 59.411 38.462 0.68 0.00 30.07 1.89
2827 4394 7.524863 GCCCCTAAAAACTGTGCTTTTAATACT 60.525 37.037 0.68 0.00 30.07 2.12
2828 4395 7.812669 CCCCTAAAAACTGTGCTTTTAATACTG 59.187 37.037 0.68 0.00 30.07 2.74
2829 4396 8.357402 CCCTAAAAACTGTGCTTTTAATACTGT 58.643 33.333 0.68 0.00 30.07 3.55
2846 4413 4.367039 ACTGTAGTATTGGGCAAACTGT 57.633 40.909 0.00 0.00 0.00 3.55
2847 4414 5.492855 ACTGTAGTATTGGGCAAACTGTA 57.507 39.130 0.00 0.00 0.00 2.74
2848 4415 5.488341 ACTGTAGTATTGGGCAAACTGTAG 58.512 41.667 0.00 0.00 0.00 2.74
2849 4416 5.012768 ACTGTAGTATTGGGCAAACTGTAGT 59.987 40.000 0.00 0.00 0.00 2.73
2850 4417 5.871834 TGTAGTATTGGGCAAACTGTAGTT 58.128 37.500 0.00 0.00 40.50 2.24
2852 4419 6.773685 TGTAGTATTGGGCAAACTGTAGTTTT 59.226 34.615 7.25 0.00 45.07 2.43
2853 4420 6.724893 AGTATTGGGCAAACTGTAGTTTTT 57.275 33.333 7.25 0.00 45.07 1.94
2868 4435 3.141409 TTTTTCTCTGCCCCAACCC 57.859 52.632 0.00 0.00 0.00 4.11
2869 4436 0.560688 TTTTTCTCTGCCCCAACCCT 59.439 50.000 0.00 0.00 0.00 4.34
2870 4437 0.112412 TTTTCTCTGCCCCAACCCTC 59.888 55.000 0.00 0.00 0.00 4.30
2871 4438 1.789576 TTTCTCTGCCCCAACCCTCC 61.790 60.000 0.00 0.00 0.00 4.30
2872 4439 2.612115 CTCTGCCCCAACCCTCCT 60.612 66.667 0.00 0.00 0.00 3.69
2873 4440 2.121506 TCTGCCCCAACCCTCCTT 60.122 61.111 0.00 0.00 0.00 3.36
2874 4441 1.778383 TCTGCCCCAACCCTCCTTT 60.778 57.895 0.00 0.00 0.00 3.11
2875 4442 1.156095 CTGCCCCAACCCTCCTTTT 59.844 57.895 0.00 0.00 0.00 2.27
2876 4443 0.407918 CTGCCCCAACCCTCCTTTTA 59.592 55.000 0.00 0.00 0.00 1.52
2877 4444 0.861155 TGCCCCAACCCTCCTTTTAA 59.139 50.000 0.00 0.00 0.00 1.52
2878 4445 1.220750 TGCCCCAACCCTCCTTTTAAA 59.779 47.619 0.00 0.00 0.00 1.52
2879 4446 2.331166 GCCCCAACCCTCCTTTTAAAA 58.669 47.619 0.00 0.00 0.00 1.52
2880 4447 2.706723 GCCCCAACCCTCCTTTTAAAAA 59.293 45.455 1.66 0.00 0.00 1.94
2898 4465 3.601443 AAAATAGAGCTGTCGAGTGCT 57.399 42.857 11.30 11.30 42.82 4.40
2899 4466 3.601443 AAATAGAGCTGTCGAGTGCTT 57.399 42.857 12.51 6.55 39.91 3.91
2900 4467 4.720649 AAATAGAGCTGTCGAGTGCTTA 57.279 40.909 12.51 8.12 39.91 3.09
2901 4468 4.720649 AATAGAGCTGTCGAGTGCTTAA 57.279 40.909 12.51 5.67 39.91 1.85
2902 4469 4.720649 ATAGAGCTGTCGAGTGCTTAAA 57.279 40.909 12.51 3.61 39.91 1.52
2903 4470 3.601443 AGAGCTGTCGAGTGCTTAAAT 57.399 42.857 12.51 0.00 39.91 1.40
2904 4471 4.720649 AGAGCTGTCGAGTGCTTAAATA 57.279 40.909 12.51 0.00 39.91 1.40
2905 4472 4.425520 AGAGCTGTCGAGTGCTTAAATAC 58.574 43.478 12.51 0.87 39.91 1.89
2906 4473 3.179830 AGCTGTCGAGTGCTTAAATACG 58.820 45.455 6.30 0.00 35.86 3.06
2907 4474 3.119602 AGCTGTCGAGTGCTTAAATACGA 60.120 43.478 6.30 0.00 35.86 3.43
2908 4475 3.000971 GCTGTCGAGTGCTTAAATACGAC 60.001 47.826 0.00 0.00 46.24 4.34
2909 4476 3.795502 GTCGAGTGCTTAAATACGACG 57.204 47.619 0.00 0.00 39.97 5.12
2910 4477 2.529090 GTCGAGTGCTTAAATACGACGG 59.471 50.000 0.00 0.00 39.97 4.79
2911 4478 1.254570 CGAGTGCTTAAATACGACGGC 59.745 52.381 0.00 0.00 0.00 5.68
2912 4479 2.537401 GAGTGCTTAAATACGACGGCT 58.463 47.619 0.00 0.00 0.00 5.52
2913 4480 3.699067 GAGTGCTTAAATACGACGGCTA 58.301 45.455 0.00 0.00 0.00 3.93
2914 4481 4.107622 GAGTGCTTAAATACGACGGCTAA 58.892 43.478 0.00 0.00 0.00 3.09
2915 4482 4.497300 AGTGCTTAAATACGACGGCTAAA 58.503 39.130 0.00 0.00 0.00 1.85
2916 4483 4.328169 AGTGCTTAAATACGACGGCTAAAC 59.672 41.667 0.00 0.00 0.00 2.01
2917 4484 4.091800 GTGCTTAAATACGACGGCTAAACA 59.908 41.667 0.00 0.00 0.00 2.83
2918 4485 4.327898 TGCTTAAATACGACGGCTAAACAG 59.672 41.667 0.00 0.00 0.00 3.16
2919 4486 4.781258 GCTTAAATACGACGGCTAAACAGC 60.781 45.833 0.00 0.00 0.00 4.40
2920 4487 2.373540 AATACGACGGCTAAACAGCA 57.626 45.000 0.00 0.00 36.33 4.41
2921 4488 2.373540 ATACGACGGCTAAACAGCAA 57.626 45.000 0.00 0.00 36.33 3.91
2922 4489 2.151881 TACGACGGCTAAACAGCAAA 57.848 45.000 0.00 0.00 36.33 3.68
2923 4490 1.519408 ACGACGGCTAAACAGCAAAT 58.481 45.000 0.00 0.00 36.33 2.32
2924 4491 1.877443 ACGACGGCTAAACAGCAAATT 59.123 42.857 0.00 0.00 36.33 1.82
2925 4492 2.292292 ACGACGGCTAAACAGCAAATTT 59.708 40.909 0.00 0.00 36.33 1.82
2926 4493 3.499157 ACGACGGCTAAACAGCAAATTTA 59.501 39.130 0.00 0.00 36.33 1.40
2927 4494 3.844099 CGACGGCTAAACAGCAAATTTAC 59.156 43.478 0.00 0.00 36.33 2.01
2928 4495 4.611807 CGACGGCTAAACAGCAAATTTACA 60.612 41.667 0.00 0.00 36.33 2.41
2929 4496 4.794169 ACGGCTAAACAGCAAATTTACAG 58.206 39.130 0.00 0.00 36.33 2.74
2930 4497 3.608073 CGGCTAAACAGCAAATTTACAGC 59.392 43.478 0.00 0.00 36.33 4.40
2931 4498 3.608073 GGCTAAACAGCAAATTTACAGCG 59.392 43.478 0.00 0.00 36.33 5.18
2932 4499 4.226761 GCTAAACAGCAAATTTACAGCGT 58.773 39.130 0.00 0.00 34.41 5.07
2933 4500 4.679654 GCTAAACAGCAAATTTACAGCGTT 59.320 37.500 0.00 0.00 34.41 4.84
2934 4501 5.854338 GCTAAACAGCAAATTTACAGCGTTA 59.146 36.000 0.00 0.00 34.41 3.18
2935 4502 6.526674 GCTAAACAGCAAATTTACAGCGTTAT 59.473 34.615 0.00 0.00 34.41 1.89
2936 4503 6.689178 AAACAGCAAATTTACAGCGTTATG 57.311 33.333 0.00 0.00 0.00 1.90
2937 4504 4.165779 ACAGCAAATTTACAGCGTTATGC 58.834 39.130 0.00 0.00 46.98 3.14
2946 4513 2.021931 GCGTTATGCAGCGACAGC 59.978 61.111 11.44 5.50 45.45 4.40
2947 4514 2.703409 CGTTATGCAGCGACAGCC 59.297 61.111 0.00 0.00 46.67 4.85
2948 4515 2.100031 CGTTATGCAGCGACAGCCA 61.100 57.895 0.00 0.00 46.67 4.75
2949 4516 1.634757 CGTTATGCAGCGACAGCCAA 61.635 55.000 0.00 0.00 46.67 4.52
2950 4517 0.521291 GTTATGCAGCGACAGCCAAA 59.479 50.000 0.00 0.00 46.67 3.28
2951 4518 0.521291 TTATGCAGCGACAGCCAAAC 59.479 50.000 0.00 0.00 46.67 2.93
2952 4519 0.605050 TATGCAGCGACAGCCAAACA 60.605 50.000 0.00 0.00 46.67 2.83
2953 4520 1.859427 ATGCAGCGACAGCCAAACAG 61.859 55.000 0.00 0.00 46.67 3.16
2954 4521 2.949106 CAGCGACAGCCAAACAGG 59.051 61.111 0.00 0.00 46.67 4.00
2955 4522 1.893808 CAGCGACAGCCAAACAGGT 60.894 57.895 0.00 0.00 46.67 4.00
2956 4523 1.152963 AGCGACAGCCAAACAGGTT 60.153 52.632 0.00 0.00 46.67 3.50
2957 4524 1.166531 AGCGACAGCCAAACAGGTTC 61.167 55.000 0.00 0.00 46.67 3.62
2958 4525 1.166531 GCGACAGCCAAACAGGTTCT 61.167 55.000 0.00 0.00 40.61 3.01
2959 4526 1.876416 GCGACAGCCAAACAGGTTCTA 60.876 52.381 0.00 0.00 40.61 2.10
2960 4527 2.699954 CGACAGCCAAACAGGTTCTAT 58.300 47.619 0.00 0.00 40.61 1.98
2961 4528 2.416547 CGACAGCCAAACAGGTTCTATG 59.583 50.000 0.00 0.00 40.61 2.23
2962 4529 3.412386 GACAGCCAAACAGGTTCTATGT 58.588 45.455 0.00 0.00 40.61 2.29
2963 4530 4.575885 GACAGCCAAACAGGTTCTATGTA 58.424 43.478 0.00 0.00 40.61 2.29
2964 4531 5.179452 ACAGCCAAACAGGTTCTATGTAT 57.821 39.130 0.00 0.00 40.61 2.29
2965 4532 5.570320 ACAGCCAAACAGGTTCTATGTATT 58.430 37.500 0.00 0.00 40.61 1.89
2966 4533 5.415701 ACAGCCAAACAGGTTCTATGTATTG 59.584 40.000 0.00 0.00 40.61 1.90
2967 4534 5.415701 CAGCCAAACAGGTTCTATGTATTGT 59.584 40.000 0.00 0.00 40.61 2.71
2968 4535 5.415701 AGCCAAACAGGTTCTATGTATTGTG 59.584 40.000 0.00 0.00 40.61 3.33
2969 4536 5.414454 GCCAAACAGGTTCTATGTATTGTGA 59.586 40.000 0.00 0.00 40.61 3.58
2970 4537 6.072175 GCCAAACAGGTTCTATGTATTGTGAA 60.072 38.462 0.00 0.00 40.61 3.18
2971 4538 7.362920 GCCAAACAGGTTCTATGTATTGTGAAT 60.363 37.037 0.00 0.00 40.61 2.57
2972 4539 9.173021 CCAAACAGGTTCTATGTATTGTGAATA 57.827 33.333 0.00 0.00 0.00 1.75
2973 4540 9.988350 CAAACAGGTTCTATGTATTGTGAATAC 57.012 33.333 0.00 0.00 43.19 1.89
2986 4553 9.733556 TGTATTGTGAATACACCAAAATACTCT 57.266 29.630 13.89 0.00 46.43 3.24
2987 4554 9.988350 GTATTGTGAATACACCAAAATACTCTG 57.012 33.333 0.00 0.00 45.40 3.35
2988 4555 8.635765 ATTGTGAATACACCAAAATACTCTGT 57.364 30.769 0.00 0.00 45.40 3.41
2989 4556 8.458573 TTGTGAATACACCAAAATACTCTGTT 57.541 30.769 0.00 0.00 45.40 3.16
2990 4557 8.458573 TGTGAATACACCAAAATACTCTGTTT 57.541 30.769 0.00 0.00 45.40 2.83
2991 4558 8.908903 TGTGAATACACCAAAATACTCTGTTTT 58.091 29.630 0.00 0.00 45.40 2.43
2992 4559 9.180678 GTGAATACACCAAAATACTCTGTTTTG 57.819 33.333 4.76 4.76 43.00 2.44
2993 4560 9.126151 TGAATACACCAAAATACTCTGTTTTGA 57.874 29.630 11.63 0.00 45.02 2.69
3021 4588 9.770097 AAAACTATGATATCTCACACCTACATG 57.230 33.333 3.98 0.00 33.22 3.21
3022 4589 6.929625 ACTATGATATCTCACACCTACATGC 58.070 40.000 3.98 0.00 33.22 4.06
3023 4590 5.813513 ATGATATCTCACACCTACATGCA 57.186 39.130 3.98 0.00 33.22 3.96
3024 4591 5.612725 TGATATCTCACACCTACATGCAA 57.387 39.130 3.98 0.00 0.00 4.08
3025 4592 5.988287 TGATATCTCACACCTACATGCAAA 58.012 37.500 3.98 0.00 0.00 3.68
3026 4593 6.413892 TGATATCTCACACCTACATGCAAAA 58.586 36.000 3.98 0.00 0.00 2.44
3027 4594 7.056006 TGATATCTCACACCTACATGCAAAAT 58.944 34.615 3.98 0.00 0.00 1.82
3028 4595 7.557358 TGATATCTCACACCTACATGCAAAATT 59.443 33.333 3.98 0.00 0.00 1.82
3029 4596 8.978874 ATATCTCACACCTACATGCAAAATTA 57.021 30.769 0.00 0.00 0.00 1.40
3030 4597 6.494893 TCTCACACCTACATGCAAAATTAC 57.505 37.500 0.00 0.00 0.00 1.89
3031 4598 6.237901 TCTCACACCTACATGCAAAATTACT 58.762 36.000 0.00 0.00 0.00 2.24
3032 4599 6.149308 TCTCACACCTACATGCAAAATTACTG 59.851 38.462 0.00 0.00 0.00 2.74
3033 4600 5.767665 TCACACCTACATGCAAAATTACTGT 59.232 36.000 0.00 0.00 0.00 3.55
3034 4601 6.937465 TCACACCTACATGCAAAATTACTGTA 59.063 34.615 0.00 0.00 0.00 2.74
3035 4602 7.119116 TCACACCTACATGCAAAATTACTGTAG 59.881 37.037 12.42 12.42 39.18 2.74
3036 4603 6.940298 ACACCTACATGCAAAATTACTGTAGT 59.060 34.615 16.27 5.95 38.27 2.73
3037 4604 7.447238 ACACCTACATGCAAAATTACTGTAGTT 59.553 33.333 16.27 3.84 38.27 2.24
3038 4605 8.296713 CACCTACATGCAAAATTACTGTAGTTT 58.703 33.333 16.27 2.84 38.27 2.66
3039 4606 8.856103 ACCTACATGCAAAATTACTGTAGTTTT 58.144 29.630 16.27 13.30 38.27 2.43
3040 4607 9.691362 CCTACATGCAAAATTACTGTAGTTTTT 57.309 29.630 15.63 10.19 38.27 1.94
3043 4610 9.762933 ACATGCAAAATTACTGTAGTTTTTGAT 57.237 25.926 25.80 15.93 37.67 2.57
3086 4653 8.848474 ACTTTACTATCAAACACAGCATAAGT 57.152 30.769 0.00 0.00 0.00 2.24
3087 4654 8.936864 ACTTTACTATCAAACACAGCATAAGTC 58.063 33.333 0.00 0.00 0.00 3.01
3088 4655 8.840833 TTTACTATCAAACACAGCATAAGTCA 57.159 30.769 0.00 0.00 0.00 3.41
3089 4656 9.448438 TTTACTATCAAACACAGCATAAGTCAT 57.552 29.630 0.00 0.00 0.00 3.06
3090 4657 7.928307 ACTATCAAACACAGCATAAGTCATT 57.072 32.000 0.00 0.00 0.00 2.57
3092 4659 9.448438 ACTATCAAACACAGCATAAGTCATTAA 57.552 29.630 0.00 0.00 0.00 1.40
3093 4660 9.926751 CTATCAAACACAGCATAAGTCATTAAG 57.073 33.333 0.00 0.00 0.00 1.85
3094 4661 6.611381 TCAAACACAGCATAAGTCATTAAGC 58.389 36.000 0.00 0.00 36.16 3.09
3095 4662 6.430925 TCAAACACAGCATAAGTCATTAAGCT 59.569 34.615 0.00 0.00 44.54 3.74
3096 4663 6.428385 AACACAGCATAAGTCATTAAGCTC 57.572 37.500 0.00 0.00 42.46 4.09
3097 4664 5.491070 ACACAGCATAAGTCATTAAGCTCA 58.509 37.500 0.00 0.00 42.46 4.26
3098 4665 5.583854 ACACAGCATAAGTCATTAAGCTCAG 59.416 40.000 0.00 0.00 42.46 3.35
3099 4666 5.007430 CACAGCATAAGTCATTAAGCTCAGG 59.993 44.000 0.00 0.00 42.46 3.86
3100 4667 5.104776 ACAGCATAAGTCATTAAGCTCAGGA 60.105 40.000 0.00 0.00 42.46 3.86
3101 4668 5.996513 CAGCATAAGTCATTAAGCTCAGGAT 59.003 40.000 0.00 0.00 42.46 3.24
3102 4669 5.996513 AGCATAAGTCATTAAGCTCAGGATG 59.003 40.000 0.00 0.00 40.92 3.51
3103 4670 5.180868 GCATAAGTCATTAAGCTCAGGATGG 59.819 44.000 0.00 0.00 33.76 3.51
3104 4671 4.851639 AAGTCATTAAGCTCAGGATGGT 57.148 40.909 0.00 0.00 36.16 3.55
3105 4672 4.414337 AGTCATTAAGCTCAGGATGGTC 57.586 45.455 0.00 0.00 36.16 4.02
3106 4673 3.776969 AGTCATTAAGCTCAGGATGGTCA 59.223 43.478 0.00 0.00 36.16 4.02
3107 4674 4.125703 GTCATTAAGCTCAGGATGGTCAG 58.874 47.826 0.00 0.00 36.16 3.51
3108 4675 2.698855 TTAAGCTCAGGATGGTCAGC 57.301 50.000 0.00 0.00 36.16 4.26
3109 4676 1.571955 TAAGCTCAGGATGGTCAGCA 58.428 50.000 0.00 0.00 36.16 4.41
3110 4677 0.917533 AAGCTCAGGATGGTCAGCAT 59.082 50.000 0.00 0.00 36.16 3.79
3111 4678 0.917533 AGCTCAGGATGGTCAGCATT 59.082 50.000 0.00 0.00 36.16 3.56
3112 4679 1.022735 GCTCAGGATGGTCAGCATTG 58.977 55.000 0.00 0.00 36.16 2.82
3113 4680 1.407851 GCTCAGGATGGTCAGCATTGA 60.408 52.381 0.00 0.00 36.16 2.57
3114 4681 2.748798 GCTCAGGATGGTCAGCATTGAT 60.749 50.000 0.00 0.00 36.16 2.57
3115 4682 3.495629 GCTCAGGATGGTCAGCATTGATA 60.496 47.826 0.00 0.00 36.16 2.15
3116 4683 4.711399 CTCAGGATGGTCAGCATTGATAA 58.289 43.478 0.00 0.00 36.16 1.75
3117 4684 4.454678 TCAGGATGGTCAGCATTGATAAC 58.545 43.478 0.00 0.00 36.16 1.89
3118 4685 3.249320 CAGGATGGTCAGCATTGATAACG 59.751 47.826 0.00 0.00 35.39 3.18
3119 4686 3.134623 AGGATGGTCAGCATTGATAACGA 59.865 43.478 0.00 0.00 35.39 3.85
3120 4687 3.496130 GGATGGTCAGCATTGATAACGAG 59.504 47.826 0.00 0.00 35.39 4.18
3121 4688 2.905075 TGGTCAGCATTGATAACGAGG 58.095 47.619 0.00 0.00 35.39 4.63
3122 4689 2.236146 TGGTCAGCATTGATAACGAGGT 59.764 45.455 0.00 0.00 35.39 3.85
3123 4690 3.270877 GGTCAGCATTGATAACGAGGTT 58.729 45.455 0.00 0.00 35.39 3.50
3124 4691 4.081365 TGGTCAGCATTGATAACGAGGTTA 60.081 41.667 0.00 0.00 35.39 2.85
3125 4692 5.057149 GGTCAGCATTGATAACGAGGTTAT 58.943 41.667 0.89 0.89 40.82 1.89
3126 4693 6.183360 TGGTCAGCATTGATAACGAGGTTATA 60.183 38.462 1.29 0.00 38.62 0.98
3127 4694 6.145696 GGTCAGCATTGATAACGAGGTTATAC 59.854 42.308 1.29 0.00 38.62 1.47
3128 4695 6.700081 GTCAGCATTGATAACGAGGTTATACA 59.300 38.462 1.29 0.52 38.62 2.29
3129 4696 6.700081 TCAGCATTGATAACGAGGTTATACAC 59.300 38.462 1.29 0.00 38.62 2.90
3160 4727 4.609691 AAAAACGAGGTTATATGTGCCG 57.390 40.909 0.00 0.00 0.00 5.69
3161 4728 3.530265 AAACGAGGTTATATGTGCCGA 57.470 42.857 0.00 0.00 0.00 5.54
3162 4729 2.503920 ACGAGGTTATATGTGCCGAC 57.496 50.000 0.00 0.00 0.00 4.79
3163 4730 1.268896 ACGAGGTTATATGTGCCGACG 60.269 52.381 0.00 0.00 34.95 5.12
3164 4731 1.002142 CGAGGTTATATGTGCCGACGA 60.002 52.381 0.00 0.00 32.40 4.20
3165 4732 2.662700 GAGGTTATATGTGCCGACGAG 58.337 52.381 0.00 0.00 0.00 4.18
3166 4733 1.340248 AGGTTATATGTGCCGACGAGG 59.660 52.381 0.00 0.00 44.97 4.63
3167 4734 1.068127 GGTTATATGTGCCGACGAGGT 59.932 52.381 0.00 0.00 43.70 3.85
3168 4735 2.391879 GTTATATGTGCCGACGAGGTC 58.608 52.381 0.00 0.00 43.70 3.85
3169 4736 1.977056 TATATGTGCCGACGAGGTCT 58.023 50.000 0.00 0.00 43.70 3.85
3170 4737 0.669077 ATATGTGCCGACGAGGTCTC 59.331 55.000 0.00 0.00 43.70 3.36
3171 4738 0.678684 TATGTGCCGACGAGGTCTCA 60.679 55.000 0.00 0.00 43.70 3.27
3172 4739 1.323271 ATGTGCCGACGAGGTCTCAT 61.323 55.000 0.00 0.00 43.70 2.90
3173 4740 1.215647 GTGCCGACGAGGTCTCATT 59.784 57.895 0.00 0.00 43.70 2.57
3174 4741 0.389948 GTGCCGACGAGGTCTCATTT 60.390 55.000 0.00 0.00 43.70 2.32
3175 4742 0.320374 TGCCGACGAGGTCTCATTTT 59.680 50.000 0.00 0.00 43.70 1.82
3176 4743 1.270625 TGCCGACGAGGTCTCATTTTT 60.271 47.619 0.00 0.00 43.70 1.94
3196 4763 3.536158 TTTTTGAGAAATGCCGACGAG 57.464 42.857 0.00 0.00 0.00 4.18
3197 4764 1.438651 TTTGAGAAATGCCGACGAGG 58.561 50.000 0.00 0.00 44.97 4.63
3198 4765 0.320374 TTGAGAAATGCCGACGAGGT 59.680 50.000 0.00 0.00 43.70 3.85
3199 4766 0.108804 TGAGAAATGCCGACGAGGTC 60.109 55.000 0.00 0.00 43.70 3.85
3200 4767 0.173708 GAGAAATGCCGACGAGGTCT 59.826 55.000 0.00 0.00 43.70 3.85
3201 4768 0.608640 AGAAATGCCGACGAGGTCTT 59.391 50.000 0.00 0.00 43.70 3.01
3202 4769 1.822990 AGAAATGCCGACGAGGTCTTA 59.177 47.619 0.00 0.00 43.70 2.10
3203 4770 2.431057 AGAAATGCCGACGAGGTCTTAT 59.569 45.455 0.00 0.00 43.70 1.73
3204 4771 2.225068 AATGCCGACGAGGTCTTATG 57.775 50.000 0.00 0.00 43.70 1.90
3205 4772 1.112113 ATGCCGACGAGGTCTTATGT 58.888 50.000 0.00 0.00 43.70 2.29
3206 4773 0.172578 TGCCGACGAGGTCTTATGTG 59.827 55.000 0.00 0.00 43.70 3.21
3207 4774 0.527817 GCCGACGAGGTCTTATGTGG 60.528 60.000 0.00 0.00 43.70 4.17
3208 4775 1.100510 CCGACGAGGTCTTATGTGGA 58.899 55.000 0.00 0.00 34.51 4.02
3209 4776 1.065701 CCGACGAGGTCTTATGTGGAG 59.934 57.143 0.00 0.00 34.51 3.86
3210 4777 1.534175 CGACGAGGTCTTATGTGGAGC 60.534 57.143 0.00 0.00 0.00 4.70
3211 4778 1.751924 GACGAGGTCTTATGTGGAGCT 59.248 52.381 0.00 0.00 43.06 4.09
3212 4779 2.166664 GACGAGGTCTTATGTGGAGCTT 59.833 50.000 0.00 0.00 40.90 3.74
3213 4780 3.362706 ACGAGGTCTTATGTGGAGCTTA 58.637 45.455 0.00 0.00 40.90 3.09
3214 4781 3.767673 ACGAGGTCTTATGTGGAGCTTAA 59.232 43.478 0.00 0.00 40.90 1.85
3215 4782 4.406003 ACGAGGTCTTATGTGGAGCTTAAT 59.594 41.667 0.00 0.00 40.90 1.40
3216 4783 5.104900 ACGAGGTCTTATGTGGAGCTTAATT 60.105 40.000 0.00 0.00 40.90 1.40
3217 4784 5.235186 CGAGGTCTTATGTGGAGCTTAATTG 59.765 44.000 0.00 0.00 40.90 2.32
3218 4785 5.440610 AGGTCTTATGTGGAGCTTAATTGG 58.559 41.667 0.00 0.00 38.19 3.16
3219 4786 4.580580 GGTCTTATGTGGAGCTTAATTGGG 59.419 45.833 0.00 0.00 0.00 4.12
3220 4787 4.036852 GTCTTATGTGGAGCTTAATTGGGC 59.963 45.833 0.00 0.00 0.00 5.36
3221 4788 2.834638 ATGTGGAGCTTAATTGGGCT 57.165 45.000 6.68 6.68 41.88 5.19
3222 4789 1.838112 TGTGGAGCTTAATTGGGCTG 58.162 50.000 10.89 0.00 39.05 4.85
3223 4790 0.457443 GTGGAGCTTAATTGGGCTGC 59.543 55.000 15.28 15.28 45.01 5.25
3224 4791 1.729881 GGAGCTTAATTGGGCTGCG 59.270 57.895 10.89 0.00 39.05 5.18
3225 4792 1.728490 GGAGCTTAATTGGGCTGCGG 61.728 60.000 10.89 0.00 39.05 5.69
3226 4793 0.748005 GAGCTTAATTGGGCTGCGGA 60.748 55.000 10.89 0.00 39.05 5.54
3227 4794 0.106519 AGCTTAATTGGGCTGCGGAT 60.107 50.000 0.00 0.00 37.41 4.18
3228 4795 1.142870 AGCTTAATTGGGCTGCGGATA 59.857 47.619 0.00 0.00 37.41 2.59
3229 4796 1.266989 GCTTAATTGGGCTGCGGATAC 59.733 52.381 0.00 0.00 0.00 2.24
3230 4797 2.851195 CTTAATTGGGCTGCGGATACT 58.149 47.619 0.00 0.00 0.00 2.12
3231 4798 3.805807 GCTTAATTGGGCTGCGGATACTA 60.806 47.826 0.00 0.00 0.00 1.82
3232 4799 2.256117 AATTGGGCTGCGGATACTAC 57.744 50.000 0.00 0.00 0.00 2.73
3233 4800 1.128200 ATTGGGCTGCGGATACTACA 58.872 50.000 0.00 0.00 0.00 2.74
3234 4801 0.464036 TTGGGCTGCGGATACTACAG 59.536 55.000 0.00 0.00 40.34 2.74
3239 4806 2.515926 CTGCGGATACTACAGCACAT 57.484 50.000 0.00 0.00 36.24 3.21
3240 4807 2.826428 CTGCGGATACTACAGCACATT 58.174 47.619 0.00 0.00 36.24 2.71
3241 4808 3.198068 CTGCGGATACTACAGCACATTT 58.802 45.455 0.00 0.00 36.24 2.32
3242 4809 3.605634 TGCGGATACTACAGCACATTTT 58.394 40.909 0.00 0.00 36.24 1.82
3243 4810 3.373748 TGCGGATACTACAGCACATTTTG 59.626 43.478 0.00 0.00 36.24 2.44
3258 4825 6.926280 CACATTTTGCACGAGCTATTTTAA 57.074 33.333 6.36 0.00 42.74 1.52
3259 4826 7.332003 CACATTTTGCACGAGCTATTTTAAA 57.668 32.000 6.36 0.00 42.74 1.52
3260 4827 7.439490 CACATTTTGCACGAGCTATTTTAAAG 58.561 34.615 6.36 0.00 42.74 1.85
3261 4828 6.586082 ACATTTTGCACGAGCTATTTTAAAGG 59.414 34.615 6.36 2.33 42.74 3.11
3262 4829 5.699097 TTTGCACGAGCTATTTTAAAGGT 57.301 34.783 6.36 0.00 42.74 3.50
3263 4830 6.804770 TTTGCACGAGCTATTTTAAAGGTA 57.195 33.333 6.36 0.00 42.74 3.08
3264 4831 6.995511 TTGCACGAGCTATTTTAAAGGTAT 57.004 33.333 6.36 0.00 42.74 2.73
3265 4832 6.995511 TGCACGAGCTATTTTAAAGGTATT 57.004 33.333 6.36 0.00 42.74 1.89
3266 4833 7.385778 TGCACGAGCTATTTTAAAGGTATTT 57.614 32.000 6.36 0.00 42.74 1.40
3267 4834 7.247728 TGCACGAGCTATTTTAAAGGTATTTG 58.752 34.615 6.36 0.00 42.74 2.32
3268 4835 7.094549 TGCACGAGCTATTTTAAAGGTATTTGT 60.095 33.333 6.36 0.00 42.74 2.83
3269 4836 8.392612 GCACGAGCTATTTTAAAGGTATTTGTA 58.607 33.333 0.00 0.00 37.91 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 2.632544 GCCCCCAACTTGGTAACGC 61.633 63.158 7.06 0.00 35.17 4.84
60 61 1.154221 GGTGCCCCCAACTTGGTAA 59.846 57.895 7.06 0.00 35.17 2.85
91 92 2.100631 GTTGGATGTGGAGCGACGG 61.101 63.158 0.00 0.00 0.00 4.79
94 95 2.668632 GGGTTGGATGTGGAGCGA 59.331 61.111 0.00 0.00 0.00 4.93
110 111 0.752658 TGTATGTGAGCGATGGAGGG 59.247 55.000 0.00 0.00 0.00 4.30
133 134 3.973516 AACAGAGACGTGCGCCGA 61.974 61.111 22.10 0.00 40.70 5.54
147 148 3.273434 GGTGATGAGCTTCTATGCAACA 58.727 45.455 0.00 0.00 34.99 3.33
150 151 1.202568 CCGGTGATGAGCTTCTATGCA 60.203 52.381 0.00 0.00 34.99 3.96
188 189 2.104111 TGTGAGTCCGATGGTGAAAAGT 59.896 45.455 0.00 0.00 0.00 2.66
200 201 2.557059 TACATGCGCCTGTGAGTCCG 62.557 60.000 25.90 0.00 0.00 4.79
209 210 0.174389 CACTCAGTCTACATGCGCCT 59.826 55.000 4.18 0.00 0.00 5.52
268 269 2.936032 GGCCCTCTTCCACCACCT 60.936 66.667 0.00 0.00 0.00 4.00
295 296 0.620121 CCCCTCTGCTTCTCCCTCTT 60.620 60.000 0.00 0.00 0.00 2.85
305 306 4.488911 ATCGGCCTCCCCTCTGCT 62.489 66.667 0.00 0.00 0.00 4.24
322 323 1.453015 GCCTCTCTCTCTCTCGGCA 60.453 63.158 0.00 0.00 37.48 5.69
324 325 1.891919 CGGCCTCTCTCTCTCTCGG 60.892 68.421 0.00 0.00 0.00 4.63
376 377 0.387202 CACCGCTATCTCCCTCACAG 59.613 60.000 0.00 0.00 0.00 3.66
388 389 3.352748 TCCCTCTCCCCACCGCTA 61.353 66.667 0.00 0.00 0.00 4.26
392 393 3.695825 TCCCTCCCTCTCCCCACC 61.696 72.222 0.00 0.00 0.00 4.61
393 394 2.041405 CTCCCTCCCTCTCCCCAC 60.041 72.222 0.00 0.00 0.00 4.61
427 428 2.140792 ACTCGCACCACTCCCACTT 61.141 57.895 0.00 0.00 0.00 3.16
435 436 0.941463 CTGACTCACACTCGCACCAC 60.941 60.000 0.00 0.00 0.00 4.16
465 466 3.679502 CGTCATTTTCCAAAATTGCCCTC 59.320 43.478 0.00 0.00 36.52 4.30
505 506 9.673454 CGTTTAAGCTTTCCTAGTGTAATTTTT 57.327 29.630 3.20 0.00 0.00 1.94
519 520 6.013689 CGAAATGTAGGTCGTTTAAGCTTTC 58.986 40.000 3.20 0.00 35.66 2.62
539 540 4.202326 ACTGCTACTCCCTCTTTTTCGAAA 60.202 41.667 6.47 6.47 0.00 3.46
543 544 5.411977 GGTAAACTGCTACTCCCTCTTTTTC 59.588 44.000 0.00 0.00 0.00 2.29
544 545 5.314529 GGTAAACTGCTACTCCCTCTTTTT 58.685 41.667 0.00 0.00 0.00 1.94
570 571 1.798735 CTGCATGCCACCTTTCTCG 59.201 57.895 16.68 0.00 0.00 4.04
571 572 1.509923 GCTGCATGCCACCTTTCTC 59.490 57.895 16.68 0.00 35.15 2.87
573 574 2.180017 CGCTGCATGCCACCTTTC 59.820 61.111 16.68 0.00 38.78 2.62
614 615 3.154473 TCAGGGAATCCGGCTCCG 61.154 66.667 14.28 0.48 38.33 4.63
615 616 2.506472 GTCAGGGAATCCGGCTCC 59.494 66.667 12.76 12.76 38.33 4.70
616 617 1.389609 TACGTCAGGGAATCCGGCTC 61.390 60.000 0.00 0.00 38.33 4.70
617 618 1.380785 TACGTCAGGGAATCCGGCT 60.381 57.895 0.00 0.00 38.33 5.52
618 619 1.227176 GTACGTCAGGGAATCCGGC 60.227 63.158 0.00 0.00 38.33 6.13
619 620 1.065273 CGTACGTCAGGGAATCCGG 59.935 63.158 7.22 0.00 38.33 5.14
620 621 1.065273 CCGTACGTCAGGGAATCCG 59.935 63.158 15.21 0.00 38.33 4.18
621 622 1.227176 GCCGTACGTCAGGGAATCC 60.227 63.158 15.21 0.00 33.75 3.01
622 623 1.227176 GGCCGTACGTCAGGGAATC 60.227 63.158 15.21 0.00 33.75 2.52
623 624 1.985662 TGGCCGTACGTCAGGGAAT 60.986 57.895 15.21 0.00 33.75 3.01
624 625 2.601067 TGGCCGTACGTCAGGGAA 60.601 61.111 15.21 0.00 33.75 3.97
625 626 3.376078 GTGGCCGTACGTCAGGGA 61.376 66.667 15.21 0.00 33.75 4.20
626 627 4.446413 GGTGGCCGTACGTCAGGG 62.446 72.222 15.21 0.00 35.13 4.45
627 628 3.379445 AGGTGGCCGTACGTCAGG 61.379 66.667 15.21 0.00 0.00 3.86
628 629 2.126071 CAGGTGGCCGTACGTCAG 60.126 66.667 15.21 0.00 0.00 3.51
629 630 2.598099 TCAGGTGGCCGTACGTCA 60.598 61.111 15.21 9.40 0.00 4.35
630 631 2.126189 GTCAGGTGGCCGTACGTC 60.126 66.667 15.21 0.00 0.00 4.34
631 632 1.823169 AATGTCAGGTGGCCGTACGT 61.823 55.000 15.21 0.00 0.00 3.57
632 633 1.079405 AATGTCAGGTGGCCGTACG 60.079 57.895 8.69 8.69 0.00 3.67
633 634 1.024579 CCAATGTCAGGTGGCCGTAC 61.025 60.000 0.00 0.00 0.00 3.67
634 635 1.298340 CCAATGTCAGGTGGCCGTA 59.702 57.895 0.00 0.00 0.00 4.02
635 636 2.034066 CCAATGTCAGGTGGCCGT 59.966 61.111 0.00 0.00 0.00 5.68
636 637 2.751436 CCCAATGTCAGGTGGCCG 60.751 66.667 0.00 0.00 33.21 6.13
637 638 3.070576 GCCCAATGTCAGGTGGCC 61.071 66.667 0.00 0.00 36.07 5.36
638 639 3.070576 GGCCCAATGTCAGGTGGC 61.071 66.667 0.00 0.00 41.42 5.01
639 640 1.978617 GTGGCCCAATGTCAGGTGG 60.979 63.158 0.00 0.00 34.44 4.61
640 641 1.075482 AGTGGCCCAATGTCAGGTG 59.925 57.895 0.00 0.00 0.00 4.00
641 642 1.075482 CAGTGGCCCAATGTCAGGT 59.925 57.895 2.29 0.00 0.00 4.00
642 643 0.962356 GTCAGTGGCCCAATGTCAGG 60.962 60.000 11.45 0.00 31.07 3.86
643 644 1.300971 CGTCAGTGGCCCAATGTCAG 61.301 60.000 11.45 0.23 31.07 3.51
644 645 1.302431 CGTCAGTGGCCCAATGTCA 60.302 57.895 11.45 0.00 31.07 3.58
645 646 2.690778 GCGTCAGTGGCCCAATGTC 61.691 63.158 11.45 4.60 31.07 3.06
646 647 2.672996 GCGTCAGTGGCCCAATGT 60.673 61.111 11.45 0.00 31.07 2.71
647 648 3.803082 CGCGTCAGTGGCCCAATG 61.803 66.667 4.43 4.43 0.00 2.82
648 649 4.329545 ACGCGTCAGTGGCCCAAT 62.330 61.111 5.58 0.00 0.00 3.16
655 656 4.293648 TGGACCCACGCGTCAGTG 62.294 66.667 9.86 0.00 41.53 3.66
656 657 4.295119 GTGGACCCACGCGTCAGT 62.295 66.667 9.86 10.11 37.19 3.41
664 665 2.665185 GCTGACGTGTGGACCCAC 60.665 66.667 12.07 12.07 46.33 4.61
665 666 4.293648 CGCTGACGTGTGGACCCA 62.294 66.667 0.00 0.00 33.53 4.51
666 667 3.916392 CTCGCTGACGTGTGGACCC 62.916 68.421 0.00 0.00 41.18 4.46
667 668 2.430921 CTCGCTGACGTGTGGACC 60.431 66.667 0.00 0.00 41.18 4.46
668 669 2.335369 ACTCGCTGACGTGTGGAC 59.665 61.111 0.00 0.00 43.76 4.02
672 673 2.658593 GCACACTCGCTGACGTGT 60.659 61.111 0.00 0.00 46.13 4.49
673 674 3.406361 GGCACACTCGCTGACGTG 61.406 66.667 0.00 0.00 41.18 4.49
675 676 3.604494 TACGGCACACTCGCTGACG 62.604 63.158 0.00 0.00 41.00 4.35
676 677 2.087009 GTACGGCACACTCGCTGAC 61.087 63.158 0.00 0.00 41.00 3.51
677 678 2.257371 GTACGGCACACTCGCTGA 59.743 61.111 0.00 0.00 41.00 4.26
678 679 3.172575 CGTACGGCACACTCGCTG 61.173 66.667 7.57 0.00 44.25 5.18
679 680 1.855213 TAACGTACGGCACACTCGCT 61.855 55.000 21.06 0.00 0.00 4.93
680 681 1.400990 CTAACGTACGGCACACTCGC 61.401 60.000 21.06 0.00 0.00 5.03
681 682 0.166597 TCTAACGTACGGCACACTCG 59.833 55.000 21.06 0.00 0.00 4.18
682 683 1.467035 CCTCTAACGTACGGCACACTC 60.467 57.143 21.06 0.00 0.00 3.51
683 684 0.524862 CCTCTAACGTACGGCACACT 59.475 55.000 21.06 0.00 0.00 3.55
684 685 0.523072 TCCTCTAACGTACGGCACAC 59.477 55.000 21.06 0.00 0.00 3.82
685 686 0.806868 CTCCTCTAACGTACGGCACA 59.193 55.000 21.06 0.00 0.00 4.57
686 687 0.525029 GCTCCTCTAACGTACGGCAC 60.525 60.000 21.06 0.00 0.00 5.01
687 688 0.679002 AGCTCCTCTAACGTACGGCA 60.679 55.000 21.06 5.53 0.00 5.69
688 689 0.248539 CAGCTCCTCTAACGTACGGC 60.249 60.000 21.06 10.39 0.00 5.68
689 690 0.248539 GCAGCTCCTCTAACGTACGG 60.249 60.000 21.06 1.50 0.00 4.02
690 691 0.248539 GGCAGCTCCTCTAACGTACG 60.249 60.000 15.01 15.01 0.00 3.67
691 692 1.104630 AGGCAGCTCCTCTAACGTAC 58.895 55.000 0.00 0.00 43.20 3.67
692 693 3.590643 AGGCAGCTCCTCTAACGTA 57.409 52.632 0.00 0.00 43.20 3.57
693 694 4.443934 AGGCAGCTCCTCTAACGT 57.556 55.556 0.00 0.00 43.20 3.99
708 709 3.636231 TGTTGAGGCGGTGGGAGG 61.636 66.667 0.00 0.00 0.00 4.30
709 710 2.358737 GTGTTGAGGCGGTGGGAG 60.359 66.667 0.00 0.00 0.00 4.30
710 711 4.308458 CGTGTTGAGGCGGTGGGA 62.308 66.667 0.00 0.00 0.00 4.37
711 712 4.619227 ACGTGTTGAGGCGGTGGG 62.619 66.667 0.00 0.00 0.00 4.61
712 713 2.590575 AACGTGTTGAGGCGGTGG 60.591 61.111 0.00 0.00 0.00 4.61
713 714 2.631428 CAACGTGTTGAGGCGGTG 59.369 61.111 6.91 0.00 42.93 4.94
714 715 3.276846 GCAACGTGTTGAGGCGGT 61.277 61.111 16.48 0.00 42.93 5.68
729 730 4.142038 GTTCCTTCCACTTTTCCTAAGCA 58.858 43.478 0.00 0.00 0.00 3.91
751 752 4.256180 GTGGGGGCCCATAGCTCG 62.256 72.222 26.86 0.00 46.23 5.03
810 811 5.394115 GGTTTAAAATCAACCGGCTGATCAT 60.394 40.000 20.27 14.12 34.90 2.45
936 2349 1.005340 GAAGACGAAGGCAGATGCTG 58.995 55.000 4.59 0.00 41.70 4.41
937 2350 0.107945 GGAAGACGAAGGCAGATGCT 60.108 55.000 4.59 0.00 41.70 3.79
938 2351 0.391661 TGGAAGACGAAGGCAGATGC 60.392 55.000 0.00 0.00 41.14 3.91
939 2352 2.099141 TTGGAAGACGAAGGCAGATG 57.901 50.000 0.00 0.00 0.00 2.90
940 2353 2.814336 GTTTTGGAAGACGAAGGCAGAT 59.186 45.455 0.00 0.00 0.00 2.90
941 2354 2.218603 GTTTTGGAAGACGAAGGCAGA 58.781 47.619 0.00 0.00 0.00 4.26
942 2355 1.266989 GGTTTTGGAAGACGAAGGCAG 59.733 52.381 0.00 0.00 0.00 4.85
943 2356 1.314730 GGTTTTGGAAGACGAAGGCA 58.685 50.000 0.00 0.00 0.00 4.75
1095 2514 1.005394 GAACGACAGCGGGGAGAAA 60.005 57.895 0.00 0.00 43.17 2.52
1281 2700 0.323087 AATCCACCCAAACGCCTACC 60.323 55.000 0.00 0.00 0.00 3.18
1323 2742 2.032634 GGCGACCATGTCTGCGAAA 61.033 57.895 0.00 0.00 34.70 3.46
1621 3143 2.718731 CTCTCAGGTAGAGCGCGG 59.281 66.667 8.83 0.00 45.22 6.46
1761 3295 1.198637 CTGCAGTACTTTGAAGCCTGC 59.801 52.381 20.39 20.39 46.30 4.85
1817 3363 1.380524 AGATGTGCATGCTGAAGCTC 58.619 50.000 20.33 7.14 42.66 4.09
1987 3542 1.489481 ATCCTTCAGCAGATCCGACA 58.511 50.000 0.00 0.00 0.00 4.35
2339 3905 3.833070 GACTCCCGGTGATATTACCTCAT 59.167 47.826 14.25 0.00 38.62 2.90
2343 3909 5.934402 ATATGACTCCCGGTGATATTACC 57.066 43.478 6.60 6.60 32.24 2.85
2361 3927 1.264020 ACATGCGGCGCAAGTTATATG 59.736 47.619 39.46 30.09 43.62 1.78
2375 3941 0.591170 AGAACCAAACCGAACATGCG 59.409 50.000 0.00 0.00 0.00 4.73
2377 3943 4.755123 AGTTCTAGAACCAAACCGAACATG 59.245 41.667 28.05 0.00 42.06 3.21
2384 3950 9.459640 GTATTTTCAAAGTTCTAGAACCAAACC 57.540 33.333 28.05 6.23 42.06 3.27
2411 3977 7.823745 AGTCAAGTTAGGTGATCACAAAATT 57.176 32.000 26.47 20.34 0.00 1.82
2412 3978 7.823745 AAGTCAAGTTAGGTGATCACAAAAT 57.176 32.000 26.47 16.06 0.00 1.82
2417 3983 5.932303 TGCTTAAGTCAAGTTAGGTGATCAC 59.068 40.000 17.91 17.91 36.55 3.06
2420 3986 5.355350 GCATGCTTAAGTCAAGTTAGGTGAT 59.645 40.000 11.37 0.00 36.55 3.06
2439 4005 0.508641 GTGTGATCGTATCCGCATGC 59.491 55.000 7.91 7.91 0.00 4.06
2441 4007 1.869754 GCAGTGTGATCGTATCCGCAT 60.870 52.381 0.00 0.00 0.00 4.73
2444 4010 0.248498 ACGCAGTGTGATCGTATCCG 60.248 55.000 11.43 0.00 42.51 4.18
2445 4011 3.642901 ACGCAGTGTGATCGTATCC 57.357 52.632 11.43 0.00 42.51 2.59
2460 4026 1.557443 GGATACGCCTGCATACACGC 61.557 60.000 0.00 0.00 0.00 5.34
2462 4028 2.069273 GATGGATACGCCTGCATACAC 58.931 52.381 0.00 0.00 42.51 2.90
2463 4029 1.970640 AGATGGATACGCCTGCATACA 59.029 47.619 0.00 0.00 42.51 2.29
2464 4030 2.751166 AGATGGATACGCCTGCATAC 57.249 50.000 0.00 0.00 42.51 2.39
2470 4036 1.837439 TCCACAAAGATGGATACGCCT 59.163 47.619 0.00 0.00 44.14 5.52
2495 4061 1.131126 GTGCCATCGGTCATTGACAAG 59.869 52.381 18.09 11.32 33.68 3.16
2500 4066 0.940126 GCTAGTGCCATCGGTCATTG 59.060 55.000 0.00 0.00 0.00 2.82
2514 4080 5.909621 TGTAAGAATACGTCAAGGCTAGT 57.090 39.130 0.00 0.00 34.60 2.57
2517 4083 6.710597 TCTATGTAAGAATACGTCAAGGCT 57.289 37.500 0.00 0.00 34.60 4.58
2565 4132 2.325583 TCGCTGTGGTTGACTCTTTT 57.674 45.000 0.00 0.00 0.00 2.27
2569 4136 0.950555 TGCATCGCTGTGGTTGACTC 60.951 55.000 0.00 0.00 0.00 3.36
2572 4139 1.246649 AAATGCATCGCTGTGGTTGA 58.753 45.000 0.00 0.00 0.00 3.18
2578 4145 1.198867 TGCGTAAAAATGCATCGCTGT 59.801 42.857 24.35 0.00 45.69 4.40
2581 4148 3.121194 TGTTTTGCGTAAAAATGCATCGC 60.121 39.130 19.40 19.40 45.70 4.58
2583 4150 4.210120 TGGTGTTTTGCGTAAAAATGCATC 59.790 37.500 13.12 8.29 41.42 3.91
2585 4152 3.521560 TGGTGTTTTGCGTAAAAATGCA 58.478 36.364 13.12 4.83 39.86 3.96
2594 4161 3.451141 AAATGTGATGGTGTTTTGCGT 57.549 38.095 0.00 0.00 0.00 5.24
2623 4190 6.719370 TGCAATACTGTGGTCCTATTTTTCTT 59.281 34.615 0.00 0.00 0.00 2.52
2639 4206 5.963176 TTGGCCATATATGTGCAATACTG 57.037 39.130 6.09 3.09 0.00 2.74
2653 4220 7.824779 GGTGTTTGGTTATTAAATTTGGCCATA 59.175 33.333 6.09 0.57 0.00 2.74
2671 4238 3.742369 GTGCTGAATCAATTGGTGTTTGG 59.258 43.478 5.42 0.00 0.00 3.28
2674 4241 2.884012 TCGTGCTGAATCAATTGGTGTT 59.116 40.909 5.42 0.00 0.00 3.32
2676 4243 2.743664 TCTCGTGCTGAATCAATTGGTG 59.256 45.455 5.42 0.00 0.00 4.17
2678 4245 2.096496 GGTCTCGTGCTGAATCAATTGG 59.904 50.000 5.42 0.00 0.00 3.16
2688 4255 1.670087 CCTTACTGTGGTCTCGTGCTG 60.670 57.143 0.00 0.00 0.00 4.41
2699 4266 0.250553 TCAAACGGGGCCTTACTGTG 60.251 55.000 0.84 0.00 0.00 3.66
2700 4267 0.250597 GTCAAACGGGGCCTTACTGT 60.251 55.000 0.84 0.00 0.00 3.55
2701 4268 0.250553 TGTCAAACGGGGCCTTACTG 60.251 55.000 0.84 0.00 0.00 2.74
2702 4269 0.036306 CTGTCAAACGGGGCCTTACT 59.964 55.000 0.84 0.00 0.00 2.24
2703 4270 0.250597 ACTGTCAAACGGGGCCTTAC 60.251 55.000 0.84 0.00 0.00 2.34
2704 4271 1.350071 TACTGTCAAACGGGGCCTTA 58.650 50.000 0.84 0.00 0.00 2.69
2705 4272 0.475044 TTACTGTCAAACGGGGCCTT 59.525 50.000 0.84 0.00 0.00 4.35
2706 4273 0.475044 TTTACTGTCAAACGGGGCCT 59.525 50.000 0.84 0.00 0.00 5.19
2707 4274 0.879090 CTTTACTGTCAAACGGGGCC 59.121 55.000 0.00 0.00 0.00 5.80
2708 4275 1.601166 ACTTTACTGTCAAACGGGGC 58.399 50.000 0.00 0.00 0.00 5.80
2709 4276 5.952526 AAATACTTTACTGTCAAACGGGG 57.047 39.130 0.00 0.00 0.00 5.73
2776 4343 8.821894 GCAACCAAACAGTTCATTGTAAATAAA 58.178 29.630 0.00 0.00 0.00 1.40
2777 4344 7.439655 GGCAACCAAACAGTTCATTGTAAATAA 59.560 33.333 0.00 0.00 0.00 1.40
2778 4345 6.926272 GGCAACCAAACAGTTCATTGTAAATA 59.074 34.615 0.00 0.00 0.00 1.40
2779 4346 5.757808 GGCAACCAAACAGTTCATTGTAAAT 59.242 36.000 0.00 0.00 0.00 1.40
2780 4347 5.112686 GGCAACCAAACAGTTCATTGTAAA 58.887 37.500 0.00 0.00 0.00 2.01
2781 4348 4.688021 GGCAACCAAACAGTTCATTGTAA 58.312 39.130 0.00 0.00 0.00 2.41
2782 4349 4.314740 GGCAACCAAACAGTTCATTGTA 57.685 40.909 0.00 0.00 0.00 2.41
2783 4350 3.177997 GGCAACCAAACAGTTCATTGT 57.822 42.857 0.00 0.00 0.00 2.71
2797 4364 8.578637 TAAAAGCACAGTTTTTAGGGGCAACC 62.579 42.308 0.00 0.00 42.43 3.77
2798 4365 1.686587 AGCACAGTTTTTAGGGGCAAC 59.313 47.619 0.00 0.00 0.00 4.17
2799 4366 2.080654 AGCACAGTTTTTAGGGGCAA 57.919 45.000 0.00 0.00 0.00 4.52
2800 4367 2.080654 AAGCACAGTTTTTAGGGGCA 57.919 45.000 0.00 0.00 0.00 5.36
2801 4368 3.469008 AAAAGCACAGTTTTTAGGGGC 57.531 42.857 0.00 0.00 0.00 5.80
2802 4369 7.812669 CAGTATTAAAAGCACAGTTTTTAGGGG 59.187 37.037 0.00 0.00 33.13 4.79
2803 4370 8.357402 ACAGTATTAAAAGCACAGTTTTTAGGG 58.643 33.333 0.00 0.00 33.13 3.53
2811 4378 9.162764 CCAATACTACAGTATTAAAAGCACAGT 57.837 33.333 12.98 0.00 46.23 3.55
2812 4379 8.612619 CCCAATACTACAGTATTAAAAGCACAG 58.387 37.037 12.98 0.59 46.23 3.66
2813 4380 7.066525 GCCCAATACTACAGTATTAAAAGCACA 59.933 37.037 12.98 0.00 46.23 4.57
2814 4381 7.066525 TGCCCAATACTACAGTATTAAAAGCAC 59.933 37.037 12.98 2.57 46.23 4.40
2815 4382 7.113437 TGCCCAATACTACAGTATTAAAAGCA 58.887 34.615 12.98 14.73 46.23 3.91
2816 4383 7.562454 TGCCCAATACTACAGTATTAAAAGC 57.438 36.000 12.98 12.94 46.23 3.51
2817 4384 9.783256 GTTTGCCCAATACTACAGTATTAAAAG 57.217 33.333 12.98 3.22 46.23 2.27
2818 4385 9.523168 AGTTTGCCCAATACTACAGTATTAAAA 57.477 29.630 12.98 9.43 46.23 1.52
2819 4386 8.952278 CAGTTTGCCCAATACTACAGTATTAAA 58.048 33.333 12.98 8.36 46.23 1.52
2820 4387 8.104566 ACAGTTTGCCCAATACTACAGTATTAA 58.895 33.333 12.98 3.47 46.23 1.40
2821 4388 7.626390 ACAGTTTGCCCAATACTACAGTATTA 58.374 34.615 12.98 0.00 46.23 0.98
2823 4390 6.062258 ACAGTTTGCCCAATACTACAGTAT 57.938 37.500 0.00 0.00 42.60 2.12
2824 4391 5.492855 ACAGTTTGCCCAATACTACAGTA 57.507 39.130 0.00 0.00 34.67 2.74
2825 4392 4.367039 ACAGTTTGCCCAATACTACAGT 57.633 40.909 0.00 0.00 0.00 3.55
2826 4393 5.488341 ACTACAGTTTGCCCAATACTACAG 58.512 41.667 0.00 0.00 0.00 2.74
2827 4394 5.492855 ACTACAGTTTGCCCAATACTACA 57.507 39.130 0.00 0.00 0.00 2.74
2828 4395 6.812879 AAACTACAGTTTGCCCAATACTAC 57.187 37.500 6.56 0.00 45.55 2.73
2829 4396 7.826918 AAAAACTACAGTTTGCCCAATACTA 57.173 32.000 8.06 0.00 46.47 1.82
2830 4397 6.724893 AAAAACTACAGTTTGCCCAATACT 57.275 33.333 8.06 0.00 46.47 2.12
2850 4417 0.560688 AGGGTTGGGGCAGAGAAAAA 59.439 50.000 0.00 0.00 0.00 1.94
2851 4418 0.112412 GAGGGTTGGGGCAGAGAAAA 59.888 55.000 0.00 0.00 0.00 2.29
2852 4419 1.767692 GAGGGTTGGGGCAGAGAAA 59.232 57.895 0.00 0.00 0.00 2.52
2853 4420 2.231380 GGAGGGTTGGGGCAGAGAA 61.231 63.158 0.00 0.00 0.00 2.87
2854 4421 2.610859 GGAGGGTTGGGGCAGAGA 60.611 66.667 0.00 0.00 0.00 3.10
2855 4422 1.793820 AAAGGAGGGTTGGGGCAGAG 61.794 60.000 0.00 0.00 0.00 3.35
2856 4423 1.368268 AAAAGGAGGGTTGGGGCAGA 61.368 55.000 0.00 0.00 0.00 4.26
2857 4424 0.407918 TAAAAGGAGGGTTGGGGCAG 59.592 55.000 0.00 0.00 0.00 4.85
2858 4425 0.861155 TTAAAAGGAGGGTTGGGGCA 59.139 50.000 0.00 0.00 0.00 5.36
2859 4426 2.018355 TTTAAAAGGAGGGTTGGGGC 57.982 50.000 0.00 0.00 0.00 5.80
2877 4444 3.931578 AGCACTCGACAGCTCTATTTTT 58.068 40.909 1.17 0.00 36.00 1.94
2878 4445 3.601443 AGCACTCGACAGCTCTATTTT 57.399 42.857 1.17 0.00 36.00 1.82
2879 4446 3.601443 AAGCACTCGACAGCTCTATTT 57.399 42.857 7.26 0.00 40.90 1.40
2880 4447 4.720649 TTAAGCACTCGACAGCTCTATT 57.279 40.909 7.26 0.00 40.90 1.73
2881 4448 4.720649 TTTAAGCACTCGACAGCTCTAT 57.279 40.909 7.26 0.00 40.90 1.98
2882 4449 4.720649 ATTTAAGCACTCGACAGCTCTA 57.279 40.909 7.26 1.32 40.90 2.43
2883 4450 3.601443 ATTTAAGCACTCGACAGCTCT 57.399 42.857 7.26 2.10 40.90 4.09
2884 4451 3.240861 CGTATTTAAGCACTCGACAGCTC 59.759 47.826 7.26 0.00 40.90 4.09
2885 4452 3.119602 TCGTATTTAAGCACTCGACAGCT 60.120 43.478 1.17 1.17 44.31 4.24
2886 4453 3.000971 GTCGTATTTAAGCACTCGACAGC 60.001 47.826 9.94 0.00 44.21 4.40
2887 4454 3.237660 CGTCGTATTTAAGCACTCGACAG 59.762 47.826 14.02 5.17 44.75 3.51
2888 4455 3.165890 CGTCGTATTTAAGCACTCGACA 58.834 45.455 14.02 0.00 44.75 4.35
2889 4456 2.529090 CCGTCGTATTTAAGCACTCGAC 59.471 50.000 0.00 0.00 42.33 4.20
2890 4457 2.789208 CCGTCGTATTTAAGCACTCGA 58.211 47.619 0.00 0.00 0.00 4.04
2891 4458 1.254570 GCCGTCGTATTTAAGCACTCG 59.745 52.381 0.00 0.00 0.00 4.18
2892 4459 2.537401 AGCCGTCGTATTTAAGCACTC 58.463 47.619 0.00 0.00 0.00 3.51
2893 4460 2.667473 AGCCGTCGTATTTAAGCACT 57.333 45.000 0.00 0.00 0.00 4.40
2894 4461 4.091800 TGTTTAGCCGTCGTATTTAAGCAC 59.908 41.667 0.00 0.00 0.00 4.40
2895 4462 4.244066 TGTTTAGCCGTCGTATTTAAGCA 58.756 39.130 0.00 0.00 0.00 3.91
2896 4463 4.781258 GCTGTTTAGCCGTCGTATTTAAGC 60.781 45.833 0.00 0.00 44.33 3.09
2897 4464 4.818825 GCTGTTTAGCCGTCGTATTTAAG 58.181 43.478 0.00 0.00 44.33 1.85
2898 4465 4.845621 GCTGTTTAGCCGTCGTATTTAA 57.154 40.909 0.00 0.00 44.33 1.52
2911 4478 7.461416 GCATAACGCTGTAAATTTGCTGTTTAG 60.461 37.037 13.18 9.26 37.77 1.85
2912 4479 6.306837 GCATAACGCTGTAAATTTGCTGTTTA 59.693 34.615 13.18 11.20 37.77 2.01
2913 4480 5.118510 GCATAACGCTGTAAATTTGCTGTTT 59.881 36.000 13.18 9.79 37.77 2.83
2914 4481 4.621034 GCATAACGCTGTAAATTTGCTGTT 59.379 37.500 13.18 13.22 37.77 3.16
2915 4482 4.165779 GCATAACGCTGTAAATTTGCTGT 58.834 39.130 13.18 4.78 37.77 4.40
2916 4483 4.165036 TGCATAACGCTGTAAATTTGCTG 58.835 39.130 7.80 8.16 43.06 4.41
2917 4484 4.414852 CTGCATAACGCTGTAAATTTGCT 58.585 39.130 7.80 0.00 43.06 3.91
2918 4485 3.000773 GCTGCATAACGCTGTAAATTTGC 60.001 43.478 0.00 0.00 43.06 3.68
2919 4486 3.238114 CGCTGCATAACGCTGTAAATTTG 59.762 43.478 0.00 0.00 43.06 2.32
2920 4487 3.126171 TCGCTGCATAACGCTGTAAATTT 59.874 39.130 0.00 0.00 43.06 1.82
2921 4488 2.675844 TCGCTGCATAACGCTGTAAATT 59.324 40.909 0.00 0.00 43.06 1.82
2922 4489 2.030457 GTCGCTGCATAACGCTGTAAAT 59.970 45.455 0.00 0.00 43.06 1.40
2923 4490 1.392168 GTCGCTGCATAACGCTGTAAA 59.608 47.619 0.00 0.00 43.06 2.01
2924 4491 0.996462 GTCGCTGCATAACGCTGTAA 59.004 50.000 0.00 0.00 43.06 2.41
2925 4492 0.109039 TGTCGCTGCATAACGCTGTA 60.109 50.000 0.00 0.00 43.06 2.74
2926 4493 1.354337 CTGTCGCTGCATAACGCTGT 61.354 55.000 0.00 0.00 43.06 4.40
2927 4494 1.346197 CTGTCGCTGCATAACGCTG 59.654 57.895 0.00 0.00 43.06 5.18
2928 4495 2.456119 GCTGTCGCTGCATAACGCT 61.456 57.895 0.00 0.00 43.06 5.07
2929 4496 2.021931 GCTGTCGCTGCATAACGC 59.978 61.111 0.00 0.00 42.89 4.84
2930 4497 1.634757 TTGGCTGTCGCTGCATAACG 61.635 55.000 0.00 0.00 36.09 3.18
2931 4498 0.521291 TTTGGCTGTCGCTGCATAAC 59.479 50.000 0.00 0.00 36.09 1.89
2932 4499 0.521291 GTTTGGCTGTCGCTGCATAA 59.479 50.000 0.00 3.58 36.09 1.90
2933 4500 0.605050 TGTTTGGCTGTCGCTGCATA 60.605 50.000 0.00 0.00 36.09 3.14
2934 4501 1.859427 CTGTTTGGCTGTCGCTGCAT 61.859 55.000 0.00 0.00 36.09 3.96
2935 4502 2.515757 TGTTTGGCTGTCGCTGCA 60.516 55.556 0.00 0.00 36.09 4.41
2936 4503 2.253452 CTGTTTGGCTGTCGCTGC 59.747 61.111 0.00 0.00 36.09 5.25
2937 4504 1.447317 AACCTGTTTGGCTGTCGCTG 61.447 55.000 0.00 0.00 40.22 5.18
2938 4505 1.152963 AACCTGTTTGGCTGTCGCT 60.153 52.632 0.00 0.00 40.22 4.93
2939 4506 1.166531 AGAACCTGTTTGGCTGTCGC 61.167 55.000 0.00 0.00 40.22 5.19
2940 4507 2.163818 TAGAACCTGTTTGGCTGTCG 57.836 50.000 0.00 0.00 40.22 4.35
2941 4508 3.412386 ACATAGAACCTGTTTGGCTGTC 58.588 45.455 0.00 0.00 40.22 3.51
2942 4509 3.508845 ACATAGAACCTGTTTGGCTGT 57.491 42.857 0.00 0.00 40.22 4.40
2943 4510 5.415701 ACAATACATAGAACCTGTTTGGCTG 59.584 40.000 0.00 0.00 40.22 4.85
2944 4511 5.415701 CACAATACATAGAACCTGTTTGGCT 59.584 40.000 0.00 0.00 40.22 4.75
2945 4512 5.414454 TCACAATACATAGAACCTGTTTGGC 59.586 40.000 0.00 0.00 40.22 4.52
2946 4513 7.447374 TTCACAATACATAGAACCTGTTTGG 57.553 36.000 0.00 0.00 42.93 3.28
2947 4514 9.988350 GTATTCACAATACATAGAACCTGTTTG 57.012 33.333 2.17 0.00 42.58 2.93
2948 4515 9.733556 TGTATTCACAATACATAGAACCTGTTT 57.266 29.630 5.20 0.00 46.43 2.83
2961 4528 9.988350 CAGAGTATTTTGGTGTATTCACAATAC 57.012 33.333 12.45 12.45 45.45 1.89
2962 4529 9.733556 ACAGAGTATTTTGGTGTATTCACAATA 57.266 29.630 4.77 0.00 45.45 1.90
2963 4530 8.635765 ACAGAGTATTTTGGTGTATTCACAAT 57.364 30.769 4.77 0.00 45.45 2.71
2964 4531 8.458573 AACAGAGTATTTTGGTGTATTCACAA 57.541 30.769 4.77 0.00 45.45 3.33
2965 4532 8.458573 AAACAGAGTATTTTGGTGTATTCACA 57.541 30.769 4.77 0.00 45.45 3.58
2966 4533 9.180678 CAAAACAGAGTATTTTGGTGTATTCAC 57.819 33.333 2.90 0.00 41.37 3.18
2967 4534 9.126151 TCAAAACAGAGTATTTTGGTGTATTCA 57.874 29.630 9.60 0.00 43.94 2.57
2995 4562 9.770097 CATGTAGGTGTGAGATATCATAGTTTT 57.230 33.333 5.32 0.00 0.00 2.43
2996 4563 7.875041 GCATGTAGGTGTGAGATATCATAGTTT 59.125 37.037 5.32 0.00 0.00 2.66
2997 4564 7.015584 TGCATGTAGGTGTGAGATATCATAGTT 59.984 37.037 5.32 0.00 0.00 2.24
2998 4565 6.494835 TGCATGTAGGTGTGAGATATCATAGT 59.505 38.462 5.32 0.00 0.00 2.12
2999 4566 6.928520 TGCATGTAGGTGTGAGATATCATAG 58.071 40.000 5.32 0.00 0.00 2.23
3000 4567 6.916360 TGCATGTAGGTGTGAGATATCATA 57.084 37.500 5.32 0.00 0.00 2.15
3001 4568 5.813513 TGCATGTAGGTGTGAGATATCAT 57.186 39.130 5.32 0.00 0.00 2.45
3002 4569 5.612725 TTGCATGTAGGTGTGAGATATCA 57.387 39.130 5.32 0.00 0.00 2.15
3003 4570 6.925610 TTTTGCATGTAGGTGTGAGATATC 57.074 37.500 0.00 0.00 0.00 1.63
3004 4571 7.886629 AATTTTGCATGTAGGTGTGAGATAT 57.113 32.000 0.00 0.00 0.00 1.63
3005 4572 8.046708 AGTAATTTTGCATGTAGGTGTGAGATA 58.953 33.333 0.00 0.00 0.00 1.98
3006 4573 6.886459 AGTAATTTTGCATGTAGGTGTGAGAT 59.114 34.615 0.00 0.00 0.00 2.75
3007 4574 6.149308 CAGTAATTTTGCATGTAGGTGTGAGA 59.851 38.462 0.00 0.00 0.00 3.27
3008 4575 6.072508 ACAGTAATTTTGCATGTAGGTGTGAG 60.073 38.462 0.00 0.00 0.00 3.51
3009 4576 5.767665 ACAGTAATTTTGCATGTAGGTGTGA 59.232 36.000 0.00 0.00 0.00 3.58
3010 4577 6.012658 ACAGTAATTTTGCATGTAGGTGTG 57.987 37.500 0.00 0.00 0.00 3.82
3011 4578 6.940298 ACTACAGTAATTTTGCATGTAGGTGT 59.060 34.615 19.99 8.23 44.82 4.16
3012 4579 7.377766 ACTACAGTAATTTTGCATGTAGGTG 57.622 36.000 19.99 3.42 44.82 4.00
3013 4580 7.996098 AACTACAGTAATTTTGCATGTAGGT 57.004 32.000 19.99 13.87 44.82 3.08
3014 4581 9.691362 AAAAACTACAGTAATTTTGCATGTAGG 57.309 29.630 19.99 7.42 44.82 3.18
3017 4584 9.762933 ATCAAAAACTACAGTAATTTTGCATGT 57.237 25.926 18.29 0.00 40.69 3.21
3060 4627 9.938280 ACTTATGCTGTGTTTGATAGTAAAGTA 57.062 29.630 0.00 0.00 0.00 2.24
3061 4628 8.848474 ACTTATGCTGTGTTTGATAGTAAAGT 57.152 30.769 0.00 0.00 0.00 2.66
3062 4629 8.935844 TGACTTATGCTGTGTTTGATAGTAAAG 58.064 33.333 0.00 0.00 0.00 1.85
3063 4630 8.840833 TGACTTATGCTGTGTTTGATAGTAAA 57.159 30.769 0.00 0.00 0.00 2.01
3064 4631 9.448438 AATGACTTATGCTGTGTTTGATAGTAA 57.552 29.630 0.00 0.00 0.00 2.24
3066 4633 7.928307 AATGACTTATGCTGTGTTTGATAGT 57.072 32.000 0.00 0.00 0.00 2.12
3067 4634 9.926751 CTTAATGACTTATGCTGTGTTTGATAG 57.073 33.333 0.00 0.00 0.00 2.08
3068 4635 8.397906 GCTTAATGACTTATGCTGTGTTTGATA 58.602 33.333 0.00 0.00 35.92 2.15
3069 4636 7.121759 AGCTTAATGACTTATGCTGTGTTTGAT 59.878 33.333 5.31 0.00 43.13 2.57
3070 4637 6.430925 AGCTTAATGACTTATGCTGTGTTTGA 59.569 34.615 5.31 0.00 43.13 2.69
3071 4638 6.615088 AGCTTAATGACTTATGCTGTGTTTG 58.385 36.000 5.31 0.00 43.13 2.93
3072 4639 6.430925 TGAGCTTAATGACTTATGCTGTGTTT 59.569 34.615 9.61 0.00 44.14 2.83
3073 4640 5.939883 TGAGCTTAATGACTTATGCTGTGTT 59.060 36.000 9.61 0.00 44.14 3.32
3074 4641 5.491070 TGAGCTTAATGACTTATGCTGTGT 58.509 37.500 9.61 0.00 44.14 3.72
3075 4642 5.007430 CCTGAGCTTAATGACTTATGCTGTG 59.993 44.000 9.61 4.04 44.14 3.66
3076 4643 5.104776 TCCTGAGCTTAATGACTTATGCTGT 60.105 40.000 9.61 0.00 44.14 4.40
3077 4644 5.363101 TCCTGAGCTTAATGACTTATGCTG 58.637 41.667 9.61 0.00 44.14 4.41
3078 4645 5.620738 TCCTGAGCTTAATGACTTATGCT 57.379 39.130 5.70 5.70 45.76 3.79
3079 4646 5.180868 CCATCCTGAGCTTAATGACTTATGC 59.819 44.000 0.00 0.00 37.95 3.14
3080 4647 6.294473 ACCATCCTGAGCTTAATGACTTATG 58.706 40.000 0.00 0.00 0.00 1.90
3081 4648 6.100279 TGACCATCCTGAGCTTAATGACTTAT 59.900 38.462 0.00 0.00 0.00 1.73
3082 4649 5.425217 TGACCATCCTGAGCTTAATGACTTA 59.575 40.000 0.00 0.00 0.00 2.24
3083 4650 4.225942 TGACCATCCTGAGCTTAATGACTT 59.774 41.667 0.00 0.00 0.00 3.01
3084 4651 3.776969 TGACCATCCTGAGCTTAATGACT 59.223 43.478 0.00 0.00 0.00 3.41
3085 4652 4.125703 CTGACCATCCTGAGCTTAATGAC 58.874 47.826 0.00 0.00 0.00 3.06
3086 4653 3.432749 GCTGACCATCCTGAGCTTAATGA 60.433 47.826 0.00 0.00 0.00 2.57
3087 4654 2.877168 GCTGACCATCCTGAGCTTAATG 59.123 50.000 0.00 0.00 0.00 1.90
3088 4655 2.507058 TGCTGACCATCCTGAGCTTAAT 59.493 45.455 0.00 0.00 32.41 1.40
3089 4656 1.908619 TGCTGACCATCCTGAGCTTAA 59.091 47.619 0.00 0.00 32.41 1.85
3090 4657 1.571955 TGCTGACCATCCTGAGCTTA 58.428 50.000 0.00 0.00 32.41 3.09
3091 4658 0.917533 ATGCTGACCATCCTGAGCTT 59.082 50.000 0.00 0.00 32.41 3.74
3092 4659 0.917533 AATGCTGACCATCCTGAGCT 59.082 50.000 0.00 0.00 31.43 4.09
3093 4660 1.022735 CAATGCTGACCATCCTGAGC 58.977 55.000 0.00 0.00 31.43 4.26
3094 4661 2.704464 TCAATGCTGACCATCCTGAG 57.296 50.000 0.00 0.00 31.43 3.35
3095 4662 4.454678 GTTATCAATGCTGACCATCCTGA 58.545 43.478 0.00 0.00 33.30 3.86
3096 4663 3.249320 CGTTATCAATGCTGACCATCCTG 59.751 47.826 0.00 0.00 33.30 3.86
3097 4664 3.134623 TCGTTATCAATGCTGACCATCCT 59.865 43.478 0.00 0.00 33.30 3.24
3098 4665 3.466836 TCGTTATCAATGCTGACCATCC 58.533 45.455 0.00 0.00 33.30 3.51
3099 4666 3.496130 CCTCGTTATCAATGCTGACCATC 59.504 47.826 0.00 0.00 33.30 3.51
3100 4667 3.118261 ACCTCGTTATCAATGCTGACCAT 60.118 43.478 0.00 0.00 33.30 3.55
3101 4668 2.236146 ACCTCGTTATCAATGCTGACCA 59.764 45.455 0.00 0.00 33.30 4.02
3102 4669 2.906354 ACCTCGTTATCAATGCTGACC 58.094 47.619 0.00 0.00 33.30 4.02
3103 4670 6.700081 TGTATAACCTCGTTATCAATGCTGAC 59.300 38.462 0.44 0.00 39.18 3.51
3104 4671 6.700081 GTGTATAACCTCGTTATCAATGCTGA 59.300 38.462 0.44 0.00 39.18 4.26
3105 4672 6.073765 GGTGTATAACCTCGTTATCAATGCTG 60.074 42.308 0.44 0.00 46.55 4.41
3106 4673 5.989777 GGTGTATAACCTCGTTATCAATGCT 59.010 40.000 0.44 0.00 46.55 3.79
3107 4674 6.224420 GGTGTATAACCTCGTTATCAATGC 57.776 41.667 0.44 0.00 46.55 3.56
3139 4706 4.093850 GTCGGCACATATAACCTCGTTTTT 59.906 41.667 0.00 0.00 0.00 1.94
3140 4707 3.619929 GTCGGCACATATAACCTCGTTTT 59.380 43.478 0.00 0.00 0.00 2.43
3141 4708 3.192466 GTCGGCACATATAACCTCGTTT 58.808 45.455 0.00 0.00 0.00 3.60
3142 4709 2.797087 CGTCGGCACATATAACCTCGTT 60.797 50.000 0.00 0.00 0.00 3.85
3143 4710 1.268896 CGTCGGCACATATAACCTCGT 60.269 52.381 0.00 0.00 0.00 4.18
3144 4711 1.002142 TCGTCGGCACATATAACCTCG 60.002 52.381 0.00 0.00 0.00 4.63
3145 4712 2.607282 CCTCGTCGGCACATATAACCTC 60.607 54.545 0.00 0.00 0.00 3.85
3146 4713 1.340248 CCTCGTCGGCACATATAACCT 59.660 52.381 0.00 0.00 0.00 3.50
3147 4714 1.068127 ACCTCGTCGGCACATATAACC 59.932 52.381 0.00 0.00 35.61 2.85
3148 4715 2.034305 AGACCTCGTCGGCACATATAAC 59.966 50.000 0.00 0.00 37.67 1.89
3149 4716 2.292569 GAGACCTCGTCGGCACATATAA 59.707 50.000 0.00 0.00 37.67 0.98
3150 4717 1.878088 GAGACCTCGTCGGCACATATA 59.122 52.381 0.00 0.00 37.67 0.86
3151 4718 0.669077 GAGACCTCGTCGGCACATAT 59.331 55.000 0.00 0.00 37.67 1.78
3152 4719 0.678684 TGAGACCTCGTCGGCACATA 60.679 55.000 0.00 0.00 37.67 2.29
3153 4720 1.323271 ATGAGACCTCGTCGGCACAT 61.323 55.000 0.00 0.00 37.67 3.21
3154 4721 1.532604 AATGAGACCTCGTCGGCACA 61.533 55.000 0.00 0.00 37.67 4.57
3155 4722 0.389948 AAATGAGACCTCGTCGGCAC 60.390 55.000 0.00 0.00 37.67 5.01
3156 4723 0.320374 AAAATGAGACCTCGTCGGCA 59.680 50.000 0.00 0.00 37.67 5.69
3157 4724 1.439679 AAAAATGAGACCTCGTCGGC 58.560 50.000 0.00 0.00 37.67 5.54
3176 4743 2.225491 CCTCGTCGGCATTTCTCAAAAA 59.775 45.455 0.00 0.00 0.00 1.94
3177 4744 1.804151 CCTCGTCGGCATTTCTCAAAA 59.196 47.619 0.00 0.00 0.00 2.44
3178 4745 1.270625 ACCTCGTCGGCATTTCTCAAA 60.271 47.619 0.00 0.00 35.61 2.69
3179 4746 0.320374 ACCTCGTCGGCATTTCTCAA 59.680 50.000 0.00 0.00 35.61 3.02
3180 4747 0.108804 GACCTCGTCGGCATTTCTCA 60.109 55.000 0.00 0.00 35.61 3.27
3181 4748 0.173708 AGACCTCGTCGGCATTTCTC 59.826 55.000 0.00 0.00 37.67 2.87
3182 4749 0.608640 AAGACCTCGTCGGCATTTCT 59.391 50.000 0.00 0.00 37.67 2.52
3183 4750 2.288961 TAAGACCTCGTCGGCATTTC 57.711 50.000 0.00 0.00 37.67 2.17
3184 4751 2.093658 ACATAAGACCTCGTCGGCATTT 60.094 45.455 0.00 0.00 37.67 2.32
3185 4752 1.480954 ACATAAGACCTCGTCGGCATT 59.519 47.619 0.00 0.00 37.67 3.56
3186 4753 1.112113 ACATAAGACCTCGTCGGCAT 58.888 50.000 0.00 0.00 37.67 4.40
3187 4754 0.172578 CACATAAGACCTCGTCGGCA 59.827 55.000 0.00 0.00 37.67 5.69
3188 4755 0.527817 CCACATAAGACCTCGTCGGC 60.528 60.000 0.00 0.00 37.67 5.54
3189 4756 1.065701 CTCCACATAAGACCTCGTCGG 59.934 57.143 0.00 0.00 37.67 4.79
3190 4757 1.534175 GCTCCACATAAGACCTCGTCG 60.534 57.143 0.00 0.00 37.67 5.12
3191 4758 1.751924 AGCTCCACATAAGACCTCGTC 59.248 52.381 0.00 0.00 0.00 4.20
3192 4759 1.853963 AGCTCCACATAAGACCTCGT 58.146 50.000 0.00 0.00 0.00 4.18
3193 4760 2.969628 AAGCTCCACATAAGACCTCG 57.030 50.000 0.00 0.00 0.00 4.63
3194 4761 5.529060 CCAATTAAGCTCCACATAAGACCTC 59.471 44.000 0.00 0.00 0.00 3.85
3195 4762 5.440610 CCAATTAAGCTCCACATAAGACCT 58.559 41.667 0.00 0.00 0.00 3.85
3196 4763 4.580580 CCCAATTAAGCTCCACATAAGACC 59.419 45.833 0.00 0.00 0.00 3.85
3197 4764 4.036852 GCCCAATTAAGCTCCACATAAGAC 59.963 45.833 0.00 0.00 0.00 3.01
3198 4765 4.079787 AGCCCAATTAAGCTCCACATAAGA 60.080 41.667 0.00 0.00 32.71 2.10
3199 4766 4.037208 CAGCCCAATTAAGCTCCACATAAG 59.963 45.833 0.00 0.00 37.18 1.73
3200 4767 3.953612 CAGCCCAATTAAGCTCCACATAA 59.046 43.478 0.00 0.00 37.18 1.90
3201 4768 3.554934 CAGCCCAATTAAGCTCCACATA 58.445 45.455 0.00 0.00 37.18 2.29
3202 4769 2.381911 CAGCCCAATTAAGCTCCACAT 58.618 47.619 0.00 0.00 37.18 3.21
3203 4770 1.838112 CAGCCCAATTAAGCTCCACA 58.162 50.000 0.00 0.00 37.18 4.17
3204 4771 0.457443 GCAGCCCAATTAAGCTCCAC 59.543 55.000 0.00 0.00 37.18 4.02
3205 4772 1.031571 CGCAGCCCAATTAAGCTCCA 61.032 55.000 0.00 0.00 37.18 3.86
3206 4773 1.728490 CCGCAGCCCAATTAAGCTCC 61.728 60.000 0.00 0.00 37.18 4.70
3207 4774 0.748005 TCCGCAGCCCAATTAAGCTC 60.748 55.000 0.00 0.00 37.18 4.09
3208 4775 0.106519 ATCCGCAGCCCAATTAAGCT 60.107 50.000 0.00 0.00 40.89 3.74
3209 4776 1.266989 GTATCCGCAGCCCAATTAAGC 59.733 52.381 0.00 0.00 0.00 3.09
3210 4777 2.851195 AGTATCCGCAGCCCAATTAAG 58.149 47.619 0.00 0.00 0.00 1.85
3211 4778 3.134985 TGTAGTATCCGCAGCCCAATTAA 59.865 43.478 0.00 0.00 0.00 1.40
3212 4779 2.701423 TGTAGTATCCGCAGCCCAATTA 59.299 45.455 0.00 0.00 0.00 1.40
3213 4780 1.488812 TGTAGTATCCGCAGCCCAATT 59.511 47.619 0.00 0.00 0.00 2.32
3214 4781 1.070758 CTGTAGTATCCGCAGCCCAAT 59.929 52.381 0.00 0.00 0.00 3.16
3215 4782 0.464036 CTGTAGTATCCGCAGCCCAA 59.536 55.000 0.00 0.00 0.00 4.12
3216 4783 2.028125 GCTGTAGTATCCGCAGCCCA 62.028 60.000 4.60 0.00 46.93 5.36
3217 4784 1.301009 GCTGTAGTATCCGCAGCCC 60.301 63.158 4.60 0.00 46.93 5.19
3218 4785 4.345337 GCTGTAGTATCCGCAGCC 57.655 61.111 4.60 0.00 46.93 4.85
3220 4787 2.515926 ATGTGCTGTAGTATCCGCAG 57.484 50.000 0.00 0.00 32.38 5.18
3221 4788 2.979814 AATGTGCTGTAGTATCCGCA 57.020 45.000 0.00 0.00 0.00 5.69
3222 4789 3.940303 CAAAATGTGCTGTAGTATCCGC 58.060 45.455 0.00 0.00 0.00 5.54
3235 4802 6.926280 TTAAAATAGCTCGTGCAAAATGTG 57.074 33.333 12.58 0.00 42.74 3.21
3236 4803 6.586082 CCTTTAAAATAGCTCGTGCAAAATGT 59.414 34.615 12.58 0.00 42.74 2.71
3237 4804 6.586082 ACCTTTAAAATAGCTCGTGCAAAATG 59.414 34.615 12.58 2.84 42.74 2.32
3238 4805 6.687604 ACCTTTAAAATAGCTCGTGCAAAAT 58.312 32.000 12.58 0.00 42.74 1.82
3239 4806 6.079424 ACCTTTAAAATAGCTCGTGCAAAA 57.921 33.333 12.58 0.00 42.74 2.44
3240 4807 5.699097 ACCTTTAAAATAGCTCGTGCAAA 57.301 34.783 12.58 0.00 42.74 3.68
3241 4808 6.995511 ATACCTTTAAAATAGCTCGTGCAA 57.004 33.333 12.58 0.00 42.74 4.08
3242 4809 6.995511 AATACCTTTAAAATAGCTCGTGCA 57.004 33.333 12.58 0.00 42.74 4.57
3243 4810 7.248437 ACAAATACCTTTAAAATAGCTCGTGC 58.752 34.615 0.07 0.07 40.05 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.