Multiple sequence alignment - TraesCS4B01G226000

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BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G226000 chr4B 100.000 7303 0 0 1 7303 472422710 472430012 0.000000e+00 13487.0
1 TraesCS4B01G226000 chr4B 97.599 833 6 4 2736 3558 28277469 28276641 0.000000e+00 1415.0
2 TraesCS4B01G226000 chr4B 91.119 822 40 17 6515 7303 128797181 128796360 0.000000e+00 1083.0
3 TraesCS4B01G226000 chr4B 97.816 412 9 0 2296 2707 472424599 472425010 0.000000e+00 712.0
4 TraesCS4B01G226000 chr4B 97.816 412 9 0 1890 2301 472425005 472425416 0.000000e+00 712.0
5 TraesCS4B01G226000 chr4B 94.157 445 2 2 3554 3976 665414804 665414362 0.000000e+00 656.0
6 TraesCS4B01G226000 chr4B 93.933 445 4 2 3554 3976 570441135 570440692 0.000000e+00 651.0
7 TraesCS4B01G226000 chr4B 90.955 398 26 3 1775 2163 388983859 388984255 1.800000e-145 527.0
8 TraesCS4B01G226000 chr4B 84.934 458 53 11 4236 4681 507252747 507252294 4.020000e-122 449.0
9 TraesCS4B01G226000 chr4B 91.273 275 23 1 2296 2569 388983981 388984255 2.490000e-99 374.0
10 TraesCS4B01G226000 chr4B 93.443 183 12 0 1382 1564 388983675 388983857 9.340000e-69 272.0
11 TraesCS4B01G226000 chr4B 94.152 171 10 0 1394 1564 618125034 618124864 2.020000e-65 261.0
12 TraesCS4B01G226000 chr4B 95.092 163 8 0 1215 1377 388983468 388983630 2.610000e-64 257.0
13 TraesCS4B01G226000 chr4B 89.571 163 17 0 1653 1815 545012691 545012853 2.670000e-49 207.0
14 TraesCS4B01G226000 chr4B 91.837 49 3 1 4192 4239 413089346 413089394 4.730000e-07 67.6
15 TraesCS4B01G226000 chr7A 91.289 1676 115 19 3983 5645 218248439 218250096 0.000000e+00 2257.0
16 TraesCS4B01G226000 chr7A 97.722 834 5 3 2736 3558 60054670 60053840 0.000000e+00 1423.0
17 TraesCS4B01G226000 chr7A 92.131 826 44 11 2976 3796 650417765 650418574 0.000000e+00 1146.0
18 TraesCS4B01G226000 chr7A 88.785 856 83 9 4803 5651 103213280 103214129 0.000000e+00 1037.0
19 TraesCS4B01G226000 chr7A 93.987 449 2 3 3554 3980 60053693 60053248 0.000000e+00 656.0
20 TraesCS4B01G226000 chr7A 88.000 300 32 3 6861 7157 424370216 424369918 1.170000e-92 351.0
21 TraesCS4B01G226000 chr7A 88.519 270 30 1 2296 2564 13836232 13835963 7.070000e-85 326.0
22 TraesCS4B01G226000 chr7A 87.451 255 26 5 1564 1818 13836483 13836235 9.270000e-74 289.0
23 TraesCS4B01G226000 chr7A 89.634 164 17 0 1215 1378 13836915 13836752 7.420000e-50 209.0
24 TraesCS4B01G226000 chr5B 98.902 820 6 2 2736 3555 551411240 551412056 0.000000e+00 1461.0
25 TraesCS4B01G226000 chr5B 97.604 793 14 4 6515 7303 221849855 221849064 0.000000e+00 1354.0
26 TraesCS4B01G226000 chr5B 96.377 828 6 5 2732 3558 47569700 47570504 0.000000e+00 1341.0
27 TraesCS4B01G226000 chr5B 91.869 824 32 17 6515 7303 236292024 236291201 0.000000e+00 1118.0
28 TraesCS4B01G226000 chr5B 87.544 851 93 8 4804 5651 434948519 434949359 0.000000e+00 972.0
29 TraesCS4B01G226000 chr5B 93.626 455 3 5 3554 3984 546778911 546778459 0.000000e+00 656.0
30 TraesCS4B01G226000 chr2B 98.547 826 5 4 2736 3558 278844149 278843328 0.000000e+00 1452.0
31 TraesCS4B01G226000 chr2B 91.717 821 30 20 6515 7303 480535869 480536683 0.000000e+00 1105.0
32 TraesCS4B01G226000 chr2B 93.612 454 4 3 3554 3985 278843181 278842731 0.000000e+00 654.0
33 TraesCS4B01G226000 chr2B 93.933 445 3 2 3554 3976 768656208 768656650 0.000000e+00 651.0
34 TraesCS4B01G226000 chr2B 98.790 248 3 0 3554 3801 109977177 109976930 6.720000e-120 442.0
35 TraesCS4B01G226000 chr2B 98.790 248 3 0 3554 3801 109980117 109979870 6.720000e-120 442.0
36 TraesCS4B01G226000 chr2B 98.198 222 4 0 2736 2957 94010312 94010091 8.880000e-104 388.0
37 TraesCS4B01G226000 chr2B 96.121 232 8 1 2726 2957 27410616 27410386 1.920000e-100 377.0
38 TraesCS4B01G226000 chr2B 82.308 260 27 7 1559 1818 58277754 58277514 2.670000e-49 207.0
39 TraesCS4B01G226000 chr2B 74.514 463 84 21 1 452 67211496 67211057 3.500000e-38 171.0
40 TraesCS4B01G226000 chr2B 73.333 450 93 23 1 443 790491004 790491433 2.750000e-29 141.0
41 TraesCS4B01G226000 chr2B 96.000 50 2 0 1711 1760 277919736 277919687 1.690000e-11 82.4
42 TraesCS4B01G226000 chr2B 71.591 264 73 2 45 306 492186988 492186725 3.660000e-08 71.3
43 TraesCS4B01G226000 chr4A 97.844 835 3 3 2736 3559 644799000 644798170 0.000000e+00 1428.0
44 TraesCS4B01G226000 chr4A 88.478 1189 88 22 2 1178 67258994 67260145 0.000000e+00 1391.0
45 TraesCS4B01G226000 chr4A 91.892 962 53 15 4191 5145 192632615 192631672 0.000000e+00 1321.0
46 TraesCS4B01G226000 chr4A 89.369 602 35 17 2971 3558 704472111 704472697 0.000000e+00 730.0
47 TraesCS4B01G226000 chr4A 94.013 451 2 3 3554 3982 469832778 469832331 0.000000e+00 660.0
48 TraesCS4B01G226000 chr4A 91.304 460 40 0 5651 6110 67260196 67260655 4.810000e-176 628.0
49 TraesCS4B01G226000 chr4A 85.164 519 54 15 4237 4737 688049253 688048740 1.820000e-140 510.0
50 TraesCS4B01G226000 chr4A 86.826 334 30 8 6045 6367 67260644 67260974 1.940000e-95 361.0
51 TraesCS4B01G226000 chr4A 89.259 270 22 6 2308 2571 646253710 646253978 1.520000e-86 331.0
52 TraesCS4B01G226000 chr4A 92.760 221 13 2 3975 4195 192699575 192699358 4.250000e-82 316.0
53 TraesCS4B01G226000 chr4A 76.603 312 52 15 1 306 720293360 720293064 1.270000e-32 152.0
54 TraesCS4B01G226000 chr4A 87.786 131 8 3 6382 6505 67261062 67261191 5.900000e-31 147.0
55 TraesCS4B01G226000 chr4A 84.259 108 12 5 4323 4426 717018039 717017933 4.660000e-17 100.0
56 TraesCS4B01G226000 chr4A 95.161 62 3 0 1564 1625 646253603 646253664 1.680000e-16 99.0
57 TraesCS4B01G226000 chr4A 93.220 59 4 0 2154 2212 67260148 67260206 3.630000e-13 87.9
58 TraesCS4B01G226000 chr4A 93.220 59 4 0 2560 2618 67260148 67260206 3.630000e-13 87.9
59 TraesCS4B01G226000 chr6B 97.842 834 2 5 2736 3558 515888796 515889624 0.000000e+00 1426.0
60 TraesCS4B01G226000 chr6B 90.545 825 39 23 6515 7303 199669242 199668421 0.000000e+00 1055.0
61 TraesCS4B01G226000 chr6B 86.721 610 62 7 1564 2162 686198988 686198387 0.000000e+00 660.0
62 TraesCS4B01G226000 chr6B 84.810 632 64 18 1559 2161 141761468 141760840 2.250000e-169 606.0
63 TraesCS4B01G226000 chr6B 89.977 429 32 5 1745 2163 7599091 7599518 1.790000e-150 544.0
64 TraesCS4B01G226000 chr6B 92.308 273 20 1 2296 2567 141761112 141760840 3.200000e-103 387.0
65 TraesCS4B01G226000 chr6B 91.273 275 23 1 2296 2569 7599244 7599518 2.490000e-99 374.0
66 TraesCS4B01G226000 chr6B 88.768 276 26 4 2296 2568 686198660 686198387 4.220000e-87 333.0
67 TraesCS4B01G226000 chr6B 93.443 183 12 0 1382 1564 141761700 141761518 9.340000e-69 272.0
68 TraesCS4B01G226000 chr6B 93.293 164 11 0 1215 1378 141761907 141761744 7.320000e-60 243.0
69 TraesCS4B01G226000 chr6B 90.446 157 15 0 1215 1371 686199372 686199216 2.670000e-49 207.0
70 TraesCS4B01G226000 chr6B 75.112 446 90 12 1 432 582868759 582869197 9.670000e-44 189.0
71 TraesCS4B01G226000 chr6B 78.388 273 53 5 5677 5946 129759181 129758912 9.740000e-39 172.0
72 TraesCS4B01G226000 chr6B 95.238 42 2 0 4191 4232 185005773 185005814 4.730000e-07 67.6
73 TraesCS4B01G226000 chr1A 96.763 834 12 4 2736 3558 510845641 510846470 0.000000e+00 1376.0
74 TraesCS4B01G226000 chr1A 87.249 847 97 6 4803 5645 398105233 398106072 0.000000e+00 955.0
75 TraesCS4B01G226000 chr6A 96.556 842 5 3 2731 3551 50154697 50153859 0.000000e+00 1373.0
76 TraesCS4B01G226000 chr6A 93.986 848 4 6 2736 3558 6360433 6361258 0.000000e+00 1240.0
77 TraesCS4B01G226000 chr6A 93.853 846 4 12 2736 3558 6371165 6371985 0.000000e+00 1230.0
78 TraesCS4B01G226000 chr6A 91.952 584 32 4 2976 3558 419574900 419574331 0.000000e+00 804.0
79 TraesCS4B01G226000 chr6A 90.686 612 33 7 1559 2161 184790798 184791394 0.000000e+00 793.0
80 TraesCS4B01G226000 chr6A 90.641 577 34 4 2982 3558 575584968 575585524 0.000000e+00 749.0
81 TraesCS4B01G226000 chr6A 91.941 273 21 1 2296 2567 184791122 184791394 1.490000e-101 381.0
82 TraesCS4B01G226000 chr6A 92.473 186 9 3 1382 1564 184790565 184790748 2.020000e-65 261.0
83 TraesCS4B01G226000 chr6A 95.122 164 8 0 1215 1378 184790358 184790521 7.270000e-65 259.0
84 TraesCS4B01G226000 chr6A 78.927 261 43 9 5692 5946 72873420 72873166 4.530000e-37 167.0
85 TraesCS4B01G226000 chrUn 96.445 844 5 4 2736 3558 272236452 272235613 0.000000e+00 1369.0
86 TraesCS4B01G226000 chrUn 94.668 844 11 11 2736 3558 71059428 71060258 0.000000e+00 1279.0
87 TraesCS4B01G226000 chrUn 94.863 837 5 7 2736 3558 353427649 353426837 0.000000e+00 1273.0
88 TraesCS4B01G226000 chrUn 93.875 849 4 7 2736 3558 383504617 383503791 0.000000e+00 1236.0
89 TraesCS4B01G226000 chrUn 95.530 604 3 2 2977 3558 464139078 464138477 0.000000e+00 944.0
90 TraesCS4B01G226000 chrUn 89.667 600 39 11 2982 3576 301120046 301120627 0.000000e+00 743.0
91 TraesCS4B01G226000 chrUn 93.708 445 5 2 3554 3976 471049953 471050396 0.000000e+00 645.0
92 TraesCS4B01G226000 chrUn 92.657 463 8 5 3554 3991 278437250 278437711 1.720000e-180 643.0
93 TraesCS4B01G226000 chrUn 93.583 374 1 2 3206 3558 439332260 439332631 3.000000e-148 536.0
94 TraesCS4B01G226000 chrUn 90.657 396 20 7 3168 3559 124706084 124705702 1.820000e-140 510.0
95 TraesCS4B01G226000 chrUn 98.790 248 3 0 3554 3801 317316864 317317111 6.720000e-120 442.0
96 TraesCS4B01G226000 chrUn 97.854 233 2 2 3326 3558 377448597 377448368 4.100000e-107 399.0
97 TraesCS4B01G226000 chr7B 96.606 825 3 6 2736 3558 625888487 625887686 0.000000e+00 1345.0
98 TraesCS4B01G226000 chr7B 91.230 821 39 15 6515 7303 255514130 255513311 0.000000e+00 1086.0
99 TraesCS4B01G226000 chr7B 94.183 447 2 2 3554 3976 748176704 748177150 0.000000e+00 660.0
100 TraesCS4B01G226000 chr7B 94.077 439 4 1 3554 3970 697397051 697397489 0.000000e+00 647.0
101 TraesCS4B01G226000 chr7B 90.570 456 24 6 6866 7302 313903764 313903309 2.940000e-163 586.0
102 TraesCS4B01G226000 chr7B 88.475 295 28 5 6867 7157 359513385 359513093 1.170000e-92 351.0
103 TraesCS4B01G226000 chr7B 96.907 194 4 2 3797 3990 503195523 503195714 2.540000e-84 324.0
104 TraesCS4B01G226000 chr7B 91.803 183 15 0 1382 1564 308665829 308665647 9.400000e-64 255.0
105 TraesCS4B01G226000 chr7B 93.939 165 9 1 1215 1378 308666037 308665873 1.570000e-61 248.0
106 TraesCS4B01G226000 chr7B 76.016 246 40 12 1 234 686013995 686013757 7.750000e-20 110.0
107 TraesCS4B01G226000 chr7B 86.792 53 7 0 2616 2668 20387748 20387696 7.910000e-05 60.2
108 TraesCS4B01G226000 chr3A 96.270 831 4 7 2733 3558 552233039 552233847 0.000000e+00 1338.0
109 TraesCS4B01G226000 chr3A 95.647 827 8 8 2736 3558 16625578 16624776 0.000000e+00 1303.0
110 TraesCS4B01G226000 chr3A 94.915 767 5 3 2907 3652 11934916 11934163 0.000000e+00 1170.0
111 TraesCS4B01G226000 chr3A 87.808 853 90 10 4803 5651 170736778 170735936 0.000000e+00 987.0
112 TraesCS4B01G226000 chr3A 87.602 855 93 8 4803 5651 703933616 703932769 0.000000e+00 979.0
113 TraesCS4B01G226000 chr3A 89.825 285 5 3 3730 3992 11930611 11930329 1.950000e-90 344.0
114 TraesCS4B01G226000 chr3A 88.095 252 24 4 1564 1815 455785991 455786236 1.990000e-75 294.0
115 TraesCS4B01G226000 chr3A 83.654 104 16 1 3 105 560114035 560114138 6.030000e-16 97.1
116 TraesCS4B01G226000 chr1B 92.884 801 44 8 6516 7303 258761344 258762144 0.000000e+00 1151.0
117 TraesCS4B01G226000 chr1B 89.610 462 28 12 6861 7302 512133132 512133593 2.960000e-158 569.0
118 TraesCS4B01G226000 chr1B 90.455 220 9 4 1345 1564 105093870 105094077 5.580000e-71 279.0
119 TraesCS4B01G226000 chr1B 80.870 115 22 0 109 223 101224092 101223978 2.810000e-14 91.6
120 TraesCS4B01G226000 chr1B 88.525 61 7 0 4676 4736 617923796 617923736 2.830000e-09 75.0
121 TraesCS4B01G226000 chr1B 95.349 43 2 0 4193 4235 654038325 654038283 1.310000e-07 69.4
122 TraesCS4B01G226000 chr1B 73.661 224 35 22 4526 4737 626077509 626077298 1.700000e-06 65.8
123 TraesCS4B01G226000 chr5D 89.093 816 79 9 4838 5645 432148056 432148869 0.000000e+00 1005.0
124 TraesCS4B01G226000 chr5D 91.536 319 20 6 3242 3558 547649313 547649626 4.050000e-117 433.0
125 TraesCS4B01G226000 chr5D 91.139 316 20 7 3245 3558 20838620 20838311 8.760000e-114 422.0
126 TraesCS4B01G226000 chr5D 84.703 438 50 14 4237 4660 396277379 396277813 8.760000e-114 422.0
127 TraesCS4B01G226000 chr5D 77.253 233 36 14 1 220 63608645 63608417 3.580000e-23 121.0
128 TraesCS4B01G226000 chr3D 88.098 857 84 10 4803 5651 394152695 394153541 0.000000e+00 1002.0
129 TraesCS4B01G226000 chr3D 93.354 316 15 4 3245 3558 469952079 469951768 5.160000e-126 462.0
130 TraesCS4B01G226000 chr3D 79.279 111 21 2 111 220 449281942 449281833 7.860000e-10 76.8
131 TraesCS4B01G226000 chr3D 95.556 45 0 2 4192 4235 508404413 508404370 3.660000e-08 71.3
132 TraesCS4B01G226000 chr3D 91.837 49 4 0 4191 4239 192058798 192058750 1.310000e-07 69.4
133 TraesCS4B01G226000 chr5A 86.004 936 108 9 4738 5651 456630685 456631619 0.000000e+00 981.0
134 TraesCS4B01G226000 chr5A 92.370 616 34 6 1559 2165 482624118 482623507 0.000000e+00 865.0
135 TraesCS4B01G226000 chr5A 93.827 567 20 5 3064 3617 497330386 497330950 0.000000e+00 839.0
136 TraesCS4B01G226000 chr5A 91.697 277 21 2 2296 2571 482623782 482623507 4.130000e-102 383.0
137 TraesCS4B01G226000 chr5A 93.011 186 8 3 1382 1564 482624351 482624168 4.340000e-67 267.0
138 TraesCS4B01G226000 chr5A 93.293 164 11 0 1215 1378 482624558 482624395 7.320000e-60 243.0
139 TraesCS4B01G226000 chr5A 95.455 44 2 0 4192 4235 481105344 481105301 3.660000e-08 71.3
140 TraesCS4B01G226000 chr5A 91.837 49 4 0 4192 4240 601203625 601203673 1.310000e-07 69.4
141 TraesCS4B01G226000 chr2D 87.966 831 88 11 4828 5651 609513317 609514142 0.000000e+00 970.0
142 TraesCS4B01G226000 chr2D 84.668 437 52 11 4237 4660 498096357 498095923 8.760000e-114 422.0
143 TraesCS4B01G226000 chr2D 89.506 324 25 8 3242 3558 480392015 480392336 1.140000e-107 401.0
144 TraesCS4B01G226000 chr2D 90.244 164 16 0 1215 1378 632207210 632207047 1.600000e-51 215.0
145 TraesCS4B01G226000 chr2D 75.541 462 83 22 1 453 83936566 83936126 4.470000e-47 200.0
146 TraesCS4B01G226000 chr4D 93.171 615 33 7 570 1177 385985442 385986054 0.000000e+00 894.0
147 TraesCS4B01G226000 chr4D 88.980 735 61 9 5651 6368 385986384 385987115 0.000000e+00 891.0
148 TraesCS4B01G226000 chr4D 84.586 519 61 12 4231 4737 455194893 455195404 1.410000e-136 497.0
149 TraesCS4B01G226000 chr4D 85.194 439 62 3 1 437 385984926 385985363 1.450000e-121 448.0
150 TraesCS4B01G226000 chr4D 75.699 465 84 20 1 456 3306292 3305848 9.600000e-49 206.0
151 TraesCS4B01G226000 chr4D 75.524 429 82 15 1 416 316525972 316525554 9.670000e-44 189.0
152 TraesCS4B01G226000 chr4D 87.692 130 9 4 6382 6505 385987202 385987330 2.120000e-30 145.0
153 TraesCS4B01G226000 chr4D 74.394 289 59 10 8 283 318609296 318609010 7.750000e-20 110.0
154 TraesCS4B01G226000 chr7D 96.137 466 14 4 6518 6979 468089043 468088578 0.000000e+00 758.0
155 TraesCS4B01G226000 chr7D 95.736 469 16 3 6515 6979 414422979 414422511 0.000000e+00 752.0
156 TraesCS4B01G226000 chr7D 85.907 518 58 12 4231 4737 106596096 106595583 8.340000e-149 538.0
157 TraesCS4B01G226000 chr7D 90.000 320 25 6 3242 3558 107207671 107207986 2.450000e-109 407.0
158 TraesCS4B01G226000 chr7D 93.015 272 14 4 3288 3558 141330619 141330886 6.870000e-105 392.0
159 TraesCS4B01G226000 chr7D 89.437 284 28 2 1884 2165 103194095 103193812 2.510000e-94 357.0
160 TraesCS4B01G226000 chr7D 91.351 185 12 2 1382 1564 103194563 103194381 4.370000e-62 250.0
161 TraesCS4B01G226000 chr7D 73.474 426 87 20 1 409 585613678 585613262 3.550000e-28 137.0
162 TraesCS4B01G226000 chr7D 75.620 242 48 4 1 231 19223752 19223993 7.750000e-20 110.0
163 TraesCS4B01G226000 chr7D 91.304 46 4 0 2623 2668 385922844 385922889 6.120000e-06 63.9
164 TraesCS4B01G226000 chr7D 89.130 46 5 0 2623 2668 606794819 606794864 2.850000e-04 58.4
165 TraesCS4B01G226000 chr3B 84.749 518 57 15 4237 4737 3263744 3263232 3.930000e-137 499.0
166 TraesCS4B01G226000 chr3B 88.312 385 35 6 1789 2163 452459793 452460177 3.110000e-123 453.0
167 TraesCS4B01G226000 chr3B 92.208 308 19 4 3254 3558 27503315 27503010 1.460000e-116 431.0
168 TraesCS4B01G226000 chr3B 91.398 186 12 2 1382 1565 452459499 452459682 1.220000e-62 252.0
169 TraesCS4B01G226000 chr3B 91.139 158 14 0 1215 1372 452459292 452459449 1.600000e-51 215.0
170 TraesCS4B01G226000 chr3B 80.672 119 23 0 109 227 590451476 590451358 7.800000e-15 93.5
171 TraesCS4B01G226000 chr3B 92.157 51 3 1 523 573 450339715 450339764 3.660000e-08 71.3
172 TraesCS4B01G226000 chr2A 92.470 332 2 2 3672 3981 29260047 29259717 3.110000e-123 453.0
173 TraesCS4B01G226000 chr2A 78.070 228 40 7 231 455 82534234 82534014 1.280000e-27 135.0
174 TraesCS4B01G226000 chr6D 79.070 258 48 5 5692 5946 57853622 57853368 9.740000e-39 172.0
175 TraesCS4B01G226000 chr1D 74.929 351 72 13 1 337 227645388 227645040 5.900000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G226000 chr4B 472422710 472430012 7302 False 13487.000000 13487 100.000000 1 7303 1 chr4B.!!$F2 7302
1 TraesCS4B01G226000 chr4B 28276641 28277469 828 True 1415.000000 1415 97.599000 2736 3558 1 chr4B.!!$R1 822
2 TraesCS4B01G226000 chr4B 128796360 128797181 821 True 1083.000000 1083 91.119000 6515 7303 1 chr4B.!!$R2 788
3 TraesCS4B01G226000 chr4B 472424599 472425416 817 False 712.000000 712 97.816000 1890 2707 2 chr4B.!!$F5 817
4 TraesCS4B01G226000 chr4B 388983468 388984255 787 False 357.500000 527 92.690750 1215 2569 4 chr4B.!!$F4 1354
5 TraesCS4B01G226000 chr7A 218248439 218250096 1657 False 2257.000000 2257 91.289000 3983 5645 1 chr7A.!!$F2 1662
6 TraesCS4B01G226000 chr7A 650417765 650418574 809 False 1146.000000 1146 92.131000 2976 3796 1 chr7A.!!$F3 820
7 TraesCS4B01G226000 chr7A 60053248 60054670 1422 True 1039.500000 1423 95.854500 2736 3980 2 chr7A.!!$R3 1244
8 TraesCS4B01G226000 chr7A 103213280 103214129 849 False 1037.000000 1037 88.785000 4803 5651 1 chr7A.!!$F1 848
9 TraesCS4B01G226000 chr7A 13835963 13836915 952 True 274.666667 326 88.534667 1215 2564 3 chr7A.!!$R2 1349
10 TraesCS4B01G226000 chr5B 551411240 551412056 816 False 1461.000000 1461 98.902000 2736 3555 1 chr5B.!!$F3 819
11 TraesCS4B01G226000 chr5B 221849064 221849855 791 True 1354.000000 1354 97.604000 6515 7303 1 chr5B.!!$R1 788
12 TraesCS4B01G226000 chr5B 47569700 47570504 804 False 1341.000000 1341 96.377000 2732 3558 1 chr5B.!!$F1 826
13 TraesCS4B01G226000 chr5B 236291201 236292024 823 True 1118.000000 1118 91.869000 6515 7303 1 chr5B.!!$R2 788
14 TraesCS4B01G226000 chr5B 434948519 434949359 840 False 972.000000 972 87.544000 4804 5651 1 chr5B.!!$F2 847
15 TraesCS4B01G226000 chr2B 480535869 480536683 814 False 1105.000000 1105 91.717000 6515 7303 1 chr2B.!!$F1 788
16 TraesCS4B01G226000 chr2B 278842731 278844149 1418 True 1053.000000 1452 96.079500 2736 3985 2 chr2B.!!$R8 1249
17 TraesCS4B01G226000 chr2B 109976930 109980117 3187 True 442.000000 442 98.790000 3554 3801 2 chr2B.!!$R7 247
18 TraesCS4B01G226000 chr4A 644798170 644799000 830 True 1428.000000 1428 97.844000 2736 3559 1 chr4A.!!$R4 823
19 TraesCS4B01G226000 chr4A 192631672 192632615 943 True 1321.000000 1321 91.892000 4191 5145 1 chr4A.!!$R1 954
20 TraesCS4B01G226000 chr4A 704472111 704472697 586 False 730.000000 730 89.369000 2971 3558 1 chr4A.!!$F1 587
21 TraesCS4B01G226000 chr4A 688048740 688049253 513 True 510.000000 510 85.164000 4237 4737 1 chr4A.!!$R5 500
22 TraesCS4B01G226000 chr4A 67258994 67261191 2197 False 450.466667 1391 90.139000 2 6505 6 chr4A.!!$F2 6503
23 TraesCS4B01G226000 chr6B 515888796 515889624 828 False 1426.000000 1426 97.842000 2736 3558 1 chr6B.!!$F2 822
24 TraesCS4B01G226000 chr6B 199668421 199669242 821 True 1055.000000 1055 90.545000 6515 7303 1 chr6B.!!$R2 788
25 TraesCS4B01G226000 chr6B 686198387 686199372 985 True 400.000000 660 88.645000 1215 2568 3 chr6B.!!$R4 1353
26 TraesCS4B01G226000 chr6B 141760840 141761907 1067 True 377.000000 606 90.963500 1215 2567 4 chr6B.!!$R3 1352
27 TraesCS4B01G226000 chr1A 510845641 510846470 829 False 1376.000000 1376 96.763000 2736 3558 1 chr1A.!!$F2 822
28 TraesCS4B01G226000 chr1A 398105233 398106072 839 False 955.000000 955 87.249000 4803 5645 1 chr1A.!!$F1 842
29 TraesCS4B01G226000 chr6A 50153859 50154697 838 True 1373.000000 1373 96.556000 2731 3551 1 chr6A.!!$R1 820
30 TraesCS4B01G226000 chr6A 6360433 6361258 825 False 1240.000000 1240 93.986000 2736 3558 1 chr6A.!!$F1 822
31 TraesCS4B01G226000 chr6A 6371165 6371985 820 False 1230.000000 1230 93.853000 2736 3558 1 chr6A.!!$F2 822
32 TraesCS4B01G226000 chr6A 419574331 419574900 569 True 804.000000 804 91.952000 2976 3558 1 chr6A.!!$R3 582
33 TraesCS4B01G226000 chr6A 575584968 575585524 556 False 749.000000 749 90.641000 2982 3558 1 chr6A.!!$F3 576
34 TraesCS4B01G226000 chr6A 184790358 184791394 1036 False 423.500000 793 92.555500 1215 2567 4 chr6A.!!$F4 1352
35 TraesCS4B01G226000 chrUn 272235613 272236452 839 True 1369.000000 1369 96.445000 2736 3558 1 chrUn.!!$R2 822
36 TraesCS4B01G226000 chrUn 71059428 71060258 830 False 1279.000000 1279 94.668000 2736 3558 1 chrUn.!!$F1 822
37 TraesCS4B01G226000 chrUn 353426837 353427649 812 True 1273.000000 1273 94.863000 2736 3558 1 chrUn.!!$R3 822
38 TraesCS4B01G226000 chrUn 383503791 383504617 826 True 1236.000000 1236 93.875000 2736 3558 1 chrUn.!!$R5 822
39 TraesCS4B01G226000 chrUn 464138477 464139078 601 True 944.000000 944 95.530000 2977 3558 1 chrUn.!!$R6 581
40 TraesCS4B01G226000 chrUn 301120046 301120627 581 False 743.000000 743 89.667000 2982 3576 1 chrUn.!!$F3 594
41 TraesCS4B01G226000 chr7B 625887686 625888487 801 True 1345.000000 1345 96.606000 2736 3558 1 chr7B.!!$R5 822
42 TraesCS4B01G226000 chr7B 255513311 255514130 819 True 1086.000000 1086 91.230000 6515 7303 1 chr7B.!!$R2 788
43 TraesCS4B01G226000 chr3A 552233039 552233847 808 False 1338.000000 1338 96.270000 2733 3558 1 chr3A.!!$F2 825
44 TraesCS4B01G226000 chr3A 16624776 16625578 802 True 1303.000000 1303 95.647000 2736 3558 1 chr3A.!!$R1 822
45 TraesCS4B01G226000 chr3A 170735936 170736778 842 True 987.000000 987 87.808000 4803 5651 1 chr3A.!!$R2 848
46 TraesCS4B01G226000 chr3A 703932769 703933616 847 True 979.000000 979 87.602000 4803 5651 1 chr3A.!!$R3 848
47 TraesCS4B01G226000 chr3A 11930329 11934916 4587 True 757.000000 1170 92.370000 2907 3992 2 chr3A.!!$R4 1085
48 TraesCS4B01G226000 chr1B 258761344 258762144 800 False 1151.000000 1151 92.884000 6516 7303 1 chr1B.!!$F2 787
49 TraesCS4B01G226000 chr5D 432148056 432148869 813 False 1005.000000 1005 89.093000 4838 5645 1 chr5D.!!$F2 807
50 TraesCS4B01G226000 chr3D 394152695 394153541 846 False 1002.000000 1002 88.098000 4803 5651 1 chr3D.!!$F1 848
51 TraesCS4B01G226000 chr5A 456630685 456631619 934 False 981.000000 981 86.004000 4738 5651 1 chr5A.!!$F1 913
52 TraesCS4B01G226000 chr5A 497330386 497330950 564 False 839.000000 839 93.827000 3064 3617 1 chr5A.!!$F2 553
53 TraesCS4B01G226000 chr5A 482623507 482624558 1051 True 439.500000 865 92.592750 1215 2571 4 chr5A.!!$R2 1356
54 TraesCS4B01G226000 chr2D 609513317 609514142 825 False 970.000000 970 87.966000 4828 5651 1 chr2D.!!$F2 823
55 TraesCS4B01G226000 chr4D 385984926 385987330 2404 False 594.500000 894 88.759250 1 6505 4 chr4D.!!$F2 6504
56 TraesCS4B01G226000 chr4D 455194893 455195404 511 False 497.000000 497 84.586000 4231 4737 1 chr4D.!!$F1 506
57 TraesCS4B01G226000 chr7D 106595583 106596096 513 True 538.000000 538 85.907000 4231 4737 1 chr7D.!!$R1 506
58 TraesCS4B01G226000 chr7D 103193812 103194563 751 True 303.500000 357 90.394000 1382 2165 2 chr7D.!!$R5 783
59 TraesCS4B01G226000 chr3B 3263232 3263744 512 True 499.000000 499 84.749000 4237 4737 1 chr3B.!!$R1 500
60 TraesCS4B01G226000 chr3B 452459292 452460177 885 False 306.666667 453 90.283000 1215 2163 3 chr3B.!!$F2 948

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
273 274 0.616111 ATCTTCAGGGAGGCGTCACT 60.616 55.0 5.07 5.07 36.60 3.41 F
1046 1059 0.032952 TTCGGAGTTTGCGCTGTAGT 59.967 50.0 9.73 0.00 0.00 2.73 F
1651 1771 0.040204 CCAAGGACAAGGGCCAATCT 59.960 55.0 6.18 0.00 0.00 2.40 F
2562 3199 0.031994 ACTTTGCATCCAAACGCACC 59.968 50.0 0.00 0.00 38.00 5.01 F
2727 3364 0.036294 GAACCCACTACCTGCTGGTC 60.036 60.0 19.71 0.00 44.78 4.02 F
3158 3802 0.104304 CCGGGTTCTATTCTCCCACG 59.896 60.0 0.00 0.00 41.12 4.94 F
3159 3803 0.529992 CGGGTTCTATTCTCCCACGC 60.530 60.0 0.00 0.00 41.12 5.34 F
3168 3812 0.832135 TTCTCCCACGCTCCAAGTCT 60.832 55.0 0.00 0.00 0.00 3.24 F
3174 3818 0.882042 CACGCTCCAAGTCTGCACTT 60.882 55.0 0.00 0.00 44.26 3.16 F
4093 8491 1.045407 GGCAGACCCATATGGACGTA 58.955 55.0 24.00 0.00 37.39 3.57 F
5690 10157 0.108585 TTGTGTCAGGTCTCCAAGCC 59.891 55.0 0.00 0.00 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1630 1750 0.486879 ATTGGCCCTTGTCCTTGGAA 59.513 50.000 0.00 0.0 0.00 3.53 R
2557 3194 0.039527 GTTGGCAAACTAAGGGTGCG 60.040 55.000 0.00 0.0 39.22 5.34 R
2566 3203 0.100503 GTTGACGCTGTTGGCAAACT 59.899 50.000 0.00 0.0 41.91 2.66 R
4187 8585 0.666577 ACGCTTCTTGACACTACCGC 60.667 55.000 0.00 0.0 0.00 5.68 R
4248 8646 4.480115 TCATGTCCGGGAGTCTACATTAT 58.520 43.478 0.00 0.0 30.32 1.28 R
4822 9269 3.609373 CGTGTGTACAAGTACAATACCGG 59.391 47.826 14.08 0.0 46.33 5.28 R
4832 9279 4.757594 TCAACTTTACCGTGTGTACAAGT 58.242 39.130 0.00 0.0 34.82 3.16 R
4833 9280 5.917541 ATCAACTTTACCGTGTGTACAAG 57.082 39.130 0.00 0.0 0.00 3.16 R
4907 9354 6.479660 CACACAAGTTATCAAGGCATGTTTTT 59.520 34.615 0.00 0.0 0.00 1.94 R
5867 10334 1.047002 CGATGATCTTGGAGGGCTCT 58.953 55.000 0.00 0.0 0.00 4.09 R
6512 11134 0.319211 CGCAACGGGTCAACTAGTGA 60.319 55.000 0.00 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 3.097614 AGTTGTCGTGCTAAGTCCCTAT 58.902 45.455 0.00 0.00 0.00 2.57
55 56 2.281070 CCAGCGCACCAGAACAGT 60.281 61.111 11.47 0.00 0.00 3.55
113 114 5.889853 AGAACCAACATGTAGATGCATGAAT 59.110 36.000 16.38 0.00 46.65 2.57
120 121 5.530171 ACATGTAGATGCATGAATGAAGACC 59.470 40.000 16.38 0.00 46.65 3.85
121 122 4.454678 TGTAGATGCATGAATGAAGACCC 58.545 43.478 2.46 0.00 0.00 4.46
180 181 3.319137 TCTTGTGAGATTTGTCGGAGG 57.681 47.619 0.00 0.00 0.00 4.30
223 224 2.407616 CGCTAGACGCATCACCGA 59.592 61.111 0.00 0.00 39.08 4.69
237 238 4.090588 CCGAAACGGGGCTAGCCA 62.091 66.667 34.09 0.00 44.15 4.75
246 247 1.690985 GGGCTAGCCAGGGAGAAGT 60.691 63.158 34.09 0.00 37.98 3.01
252 253 4.527944 GCTAGCCAGGGAGAAGTTTATTT 58.472 43.478 2.29 0.00 0.00 1.40
273 274 0.616111 ATCTTCAGGGAGGCGTCACT 60.616 55.000 5.07 5.07 36.60 3.41
334 336 7.061326 CGAAATCATAAAACACCTAAAAACGGG 59.939 37.037 0.00 0.00 0.00 5.28
448 451 3.616802 CGGGAGTCAGAACCCTAAGTTTC 60.617 52.174 10.99 0.00 43.57 2.78
452 455 5.470437 GGAGTCAGAACCCTAAGTTTCTTTG 59.530 44.000 0.00 0.00 39.40 2.77
459 462 7.277760 CAGAACCCTAAGTTTCTTTGTTTTTGG 59.722 37.037 0.00 0.00 39.40 3.28
525 530 3.921119 TTACTTTTGCCTCACATGCTG 57.079 42.857 0.00 0.00 0.00 4.41
526 531 1.696063 ACTTTTGCCTCACATGCTGT 58.304 45.000 0.00 0.00 0.00 4.40
535 540 3.663644 CACATGCTGTGTTTTGGCA 57.336 47.368 7.80 0.00 43.08 4.92
536 541 1.937278 CACATGCTGTGTTTTGGCAA 58.063 45.000 0.00 0.00 43.08 4.52
537 542 1.593933 CACATGCTGTGTTTTGGCAAC 59.406 47.619 0.00 0.00 43.08 4.17
538 543 1.206610 ACATGCTGTGTTTTGGCAACA 59.793 42.857 0.00 0.00 42.11 3.33
541 546 5.741639 ACATGCTGTGTTTTGGCAACAATG 61.742 41.667 0.00 0.00 46.03 2.82
544 549 9.988177 ACATGCTGTGTTTTGGCAACAATGTAT 62.988 37.037 0.00 0.00 46.03 2.29
622 630 8.798402 TGTTTTGTTTACTTTCTTCTTCTTCCA 58.202 29.630 0.00 0.00 0.00 3.53
629 637 8.871686 TTACTTTCTTCTTCTTCCAAAAATGC 57.128 30.769 0.00 0.00 0.00 3.56
671 680 0.704664 AACTTTCATCCACCCTCCCC 59.295 55.000 0.00 0.00 0.00 4.81
761 770 0.813184 TTAACGGCCAGTACGAGGAG 59.187 55.000 2.24 6.66 34.93 3.69
763 772 1.593296 AACGGCCAGTACGAGGAGAC 61.593 60.000 2.24 0.77 34.93 3.36
816 825 2.535984 GAGATCACATTAGGCGACGTTG 59.464 50.000 0.00 0.00 0.00 4.10
901 910 2.240230 GGTTGATTGAACCGCGTCA 58.760 52.632 4.92 0.00 45.00 4.35
922 931 6.934210 GTCAGTGTTTGACGCCTATATAAAG 58.066 40.000 0.00 0.00 46.13 1.85
1046 1059 0.032952 TTCGGAGTTTGCGCTGTAGT 59.967 50.000 9.73 0.00 0.00 2.73
1065 1078 4.147449 CTGGTGATCGGCCTCGCA 62.147 66.667 0.00 0.00 36.13 5.10
1069 1082 1.741770 GTGATCGGCCTCGCAAACT 60.742 57.895 0.00 0.00 36.13 2.66
1144 1157 5.316167 ACTGCACAAGGAAGAACATGAATA 58.684 37.500 0.00 0.00 0.00 1.75
1178 1191 9.181061 AGCTTTCAAAGGTACTGTACTTTTTAA 57.819 29.630 21.05 17.51 40.86 1.52
1187 1200 9.006839 AGGTACTGTACTTTTTAAATGTTAGGC 57.993 33.333 16.79 0.00 37.18 3.93
1196 1209 9.256477 ACTTTTTAAATGTTAGGCTTAGTTTGC 57.744 29.630 0.00 0.00 0.00 3.68
1213 1226 5.660460 AGTTTGCCCACAAAGTTTTTAGAG 58.340 37.500 0.00 0.00 45.18 2.43
1342 1355 2.039216 TGATGGTAACGTTGGGTGACAT 59.961 45.455 11.99 6.03 42.51 3.06
1354 1367 4.015872 TGGGTGACATCTGAAACTAACC 57.984 45.455 0.00 0.00 0.00 2.85
1378 1391 1.541310 TACACGGCCTAACTGCTGCT 61.541 55.000 0.00 0.00 41.47 4.24
1379 1392 1.218047 CACGGCCTAACTGCTGCTA 59.782 57.895 0.00 0.00 41.47 3.49
1380 1393 0.391130 CACGGCCTAACTGCTGCTAA 60.391 55.000 0.00 0.00 41.47 3.09
1385 1438 3.005472 CGGCCTAACTGCTGCTAACTATA 59.995 47.826 0.00 0.00 0.00 1.31
1492 1548 4.726583 CAGGAGGTGGATGATTGATGAAT 58.273 43.478 0.00 0.00 0.00 2.57
1585 1704 4.373527 TGTACGATGCGCCATTTATACTT 58.626 39.130 4.18 0.00 0.00 2.24
1630 1750 4.968259 TCCGGCTGCATACAAGTATATTT 58.032 39.130 0.50 0.00 0.00 1.40
1651 1771 0.040204 CCAAGGACAAGGGCCAATCT 59.960 55.000 6.18 0.00 0.00 2.40
1670 1790 4.768130 TCTATCTAATCAGTGCGCTACC 57.232 45.455 9.73 0.00 0.00 3.18
1693 1813 4.499696 CCATCCAAAATTAATCGACAGCCC 60.500 45.833 0.00 0.00 0.00 5.19
1701 1821 1.270907 AATCGACAGCCCAAGACTCT 58.729 50.000 0.00 0.00 0.00 3.24
1772 1892 2.361119 TCCAGCAGCGTCGTATCTAATT 59.639 45.455 0.00 0.00 0.00 1.40
1863 2037 4.100189 GGAGCGCATACCAGGAGATAATAT 59.900 45.833 11.47 0.00 0.00 1.28
1869 2043 7.255625 GCGCATACCAGGAGATAATATAGATCA 60.256 40.741 0.30 0.00 0.00 2.92
2213 2850 4.485163 CCTAACTGGCCTTTTTCAATTCG 58.515 43.478 3.32 0.00 0.00 3.34
2214 2851 3.385193 AACTGGCCTTTTTCAATTCGG 57.615 42.857 3.32 0.00 0.00 4.30
2215 2852 2.316108 ACTGGCCTTTTTCAATTCGGT 58.684 42.857 3.32 0.00 0.00 4.69
2216 2853 3.492337 ACTGGCCTTTTTCAATTCGGTA 58.508 40.909 3.32 0.00 0.00 4.02
2217 2854 4.086457 ACTGGCCTTTTTCAATTCGGTAT 58.914 39.130 3.32 0.00 0.00 2.73
2218 2855 5.258051 ACTGGCCTTTTTCAATTCGGTATA 58.742 37.500 3.32 0.00 0.00 1.47
2219 2856 5.891551 ACTGGCCTTTTTCAATTCGGTATAT 59.108 36.000 3.32 0.00 0.00 0.86
2220 2857 6.142818 TGGCCTTTTTCAATTCGGTATATG 57.857 37.500 3.32 0.00 0.00 1.78
2221 2858 5.654650 TGGCCTTTTTCAATTCGGTATATGT 59.345 36.000 3.32 0.00 0.00 2.29
2222 2859 6.829298 TGGCCTTTTTCAATTCGGTATATGTA 59.171 34.615 3.32 0.00 0.00 2.29
2223 2860 7.339721 TGGCCTTTTTCAATTCGGTATATGTAA 59.660 33.333 3.32 0.00 0.00 2.41
2224 2861 8.357402 GGCCTTTTTCAATTCGGTATATGTAAT 58.643 33.333 0.00 0.00 0.00 1.89
2225 2862 9.744468 GCCTTTTTCAATTCGGTATATGTAATT 57.256 29.630 0.00 0.00 0.00 1.40
2229 2866 9.938670 TTTTCAATTCGGTATATGTAATTTCCG 57.061 29.630 0.00 0.00 39.40 4.30
2230 2867 8.890124 TTCAATTCGGTATATGTAATTTCCGA 57.110 30.769 0.00 0.00 43.93 4.55
2236 2873 8.356533 TCGGTATATGTAATTTCCGAACTTTC 57.643 34.615 0.00 0.00 42.95 2.62
2252 2889 6.422223 CGAACTTTCGGATTTTATCATCAGG 58.578 40.000 3.35 0.00 46.30 3.86
2253 2890 6.037172 CGAACTTTCGGATTTTATCATCAGGT 59.963 38.462 3.35 0.00 46.30 4.00
2254 2891 6.927294 ACTTTCGGATTTTATCATCAGGTC 57.073 37.500 0.00 0.00 0.00 3.85
2255 2892 5.823045 ACTTTCGGATTTTATCATCAGGTCC 59.177 40.000 0.00 0.00 0.00 4.46
2256 2893 3.990092 TCGGATTTTATCATCAGGTCCG 58.010 45.455 4.65 4.65 46.12 4.79
2259 2896 5.674933 GGATTTTATCATCAGGTCCGAAC 57.325 43.478 0.00 0.00 0.00 3.95
2260 2897 4.211374 GGATTTTATCATCAGGTCCGAACG 59.789 45.833 0.00 0.00 0.00 3.95
2261 2898 4.459390 TTTTATCATCAGGTCCGAACGA 57.541 40.909 0.00 0.00 0.00 3.85
2262 2899 4.665833 TTTATCATCAGGTCCGAACGAT 57.334 40.909 0.00 0.00 0.00 3.73
2263 2900 2.515926 ATCATCAGGTCCGAACGATG 57.484 50.000 10.30 10.30 37.25 3.84
2264 2901 1.182667 TCATCAGGTCCGAACGATGT 58.817 50.000 14.05 0.00 37.21 3.06
2265 2902 1.548719 TCATCAGGTCCGAACGATGTT 59.451 47.619 14.05 0.00 37.21 2.71
2266 2903 1.660607 CATCAGGTCCGAACGATGTTG 59.339 52.381 9.00 0.00 32.41 3.33
2267 2904 0.677288 TCAGGTCCGAACGATGTTGT 59.323 50.000 0.00 0.00 0.00 3.32
2268 2905 1.887854 TCAGGTCCGAACGATGTTGTA 59.112 47.619 0.00 0.00 0.00 2.41
2269 2906 2.094906 TCAGGTCCGAACGATGTTGTAG 60.095 50.000 0.00 0.00 0.00 2.74
2270 2907 0.997196 GGTCCGAACGATGTTGTAGC 59.003 55.000 0.00 0.00 0.00 3.58
2271 2908 1.403780 GGTCCGAACGATGTTGTAGCT 60.404 52.381 0.00 0.00 0.00 3.32
2272 2909 2.159338 GGTCCGAACGATGTTGTAGCTA 60.159 50.000 0.00 0.00 0.00 3.32
2273 2910 3.490419 GGTCCGAACGATGTTGTAGCTAT 60.490 47.826 0.00 0.00 0.00 2.97
2274 2911 3.729716 GTCCGAACGATGTTGTAGCTATC 59.270 47.826 0.00 0.00 0.00 2.08
2275 2912 2.719556 CCGAACGATGTTGTAGCTATCG 59.280 50.000 13.00 13.00 46.55 2.92
2276 2913 3.547413 CCGAACGATGTTGTAGCTATCGA 60.547 47.826 19.77 0.00 44.64 3.59
2277 2914 3.659899 CGAACGATGTTGTAGCTATCGAG 59.340 47.826 19.77 8.78 44.64 4.04
2278 2915 3.627732 ACGATGTTGTAGCTATCGAGG 57.372 47.619 19.77 0.34 44.64 4.63
2279 2916 3.211865 ACGATGTTGTAGCTATCGAGGA 58.788 45.455 19.77 0.00 44.64 3.71
2280 2917 3.630769 ACGATGTTGTAGCTATCGAGGAA 59.369 43.478 19.77 0.00 44.64 3.36
2281 2918 4.097437 ACGATGTTGTAGCTATCGAGGAAA 59.903 41.667 19.77 0.00 44.64 3.13
2282 2919 5.041287 CGATGTTGTAGCTATCGAGGAAAA 58.959 41.667 9.71 0.00 44.64 2.29
2283 2920 5.518847 CGATGTTGTAGCTATCGAGGAAAAA 59.481 40.000 9.71 0.00 44.64 1.94
2309 2946 7.775053 AGAGCTCACTAGGAATATTAGAAGG 57.225 40.000 17.77 0.00 0.00 3.46
2310 2947 6.210584 AGAGCTCACTAGGAATATTAGAAGGC 59.789 42.308 17.77 0.00 0.00 4.35
2311 2948 5.047660 AGCTCACTAGGAATATTAGAAGGCG 60.048 44.000 0.00 0.00 0.00 5.52
2312 2949 5.047943 GCTCACTAGGAATATTAGAAGGCGA 60.048 44.000 0.00 0.00 0.00 5.54
2313 2950 6.350612 GCTCACTAGGAATATTAGAAGGCGAT 60.351 42.308 0.00 0.00 0.00 4.58
2314 2951 7.159322 TCACTAGGAATATTAGAAGGCGATC 57.841 40.000 0.00 0.00 0.00 3.69
2315 2952 6.719829 TCACTAGGAATATTAGAAGGCGATCA 59.280 38.462 0.00 0.00 0.00 2.92
2316 2953 6.809196 CACTAGGAATATTAGAAGGCGATCAC 59.191 42.308 0.00 0.00 0.00 3.06
2317 2954 5.808366 AGGAATATTAGAAGGCGATCACA 57.192 39.130 0.00 0.00 0.00 3.58
2318 2955 5.788450 AGGAATATTAGAAGGCGATCACAG 58.212 41.667 0.00 0.00 0.00 3.66
2319 2956 4.390297 GGAATATTAGAAGGCGATCACAGC 59.610 45.833 0.00 0.00 0.00 4.40
2320 2957 4.881019 ATATTAGAAGGCGATCACAGCT 57.119 40.909 0.00 0.00 34.52 4.24
2321 2958 2.299993 TTAGAAGGCGATCACAGCTG 57.700 50.000 13.48 13.48 34.52 4.24
2322 2959 1.474330 TAGAAGGCGATCACAGCTGA 58.526 50.000 23.35 0.00 34.52 4.26
2323 2960 0.829333 AGAAGGCGATCACAGCTGAT 59.171 50.000 23.35 4.02 40.07 2.90
2324 2961 2.034878 AGAAGGCGATCACAGCTGATA 58.965 47.619 23.35 8.07 37.24 2.15
2325 2962 2.632028 AGAAGGCGATCACAGCTGATAT 59.368 45.455 23.35 13.02 37.24 1.63
2326 2963 3.070734 AGAAGGCGATCACAGCTGATATT 59.929 43.478 23.35 1.43 37.24 1.28
2327 2964 3.037431 AGGCGATCACAGCTGATATTC 57.963 47.619 23.35 10.33 37.24 1.75
2328 2965 2.632028 AGGCGATCACAGCTGATATTCT 59.368 45.455 23.35 5.87 37.24 2.40
2329 2966 3.070734 AGGCGATCACAGCTGATATTCTT 59.929 43.478 23.35 0.00 37.24 2.52
2330 2967 4.281941 AGGCGATCACAGCTGATATTCTTA 59.718 41.667 23.35 0.00 37.24 2.10
2331 2968 5.046735 AGGCGATCACAGCTGATATTCTTAT 60.047 40.000 23.35 1.34 37.24 1.73
2332 2969 5.290643 GGCGATCACAGCTGATATTCTTATC 59.709 44.000 23.35 9.42 37.24 1.75
2333 2970 6.098679 GCGATCACAGCTGATATTCTTATCT 58.901 40.000 23.35 0.00 37.24 1.98
2334 2971 6.253298 GCGATCACAGCTGATATTCTTATCTC 59.747 42.308 23.35 2.78 37.24 2.75
2335 2972 6.468637 CGATCACAGCTGATATTCTTATCTCG 59.531 42.308 23.35 7.29 37.24 4.04
2336 2973 6.884280 TCACAGCTGATATTCTTATCTCGA 57.116 37.500 23.35 0.00 36.07 4.04
2337 2974 6.907741 TCACAGCTGATATTCTTATCTCGAG 58.092 40.000 23.35 5.93 36.07 4.04
2338 2975 6.488344 TCACAGCTGATATTCTTATCTCGAGT 59.512 38.462 23.35 2.46 36.07 4.18
2339 2976 7.661847 TCACAGCTGATATTCTTATCTCGAGTA 59.338 37.037 23.35 1.43 36.07 2.59
2340 2977 7.962373 CACAGCTGATATTCTTATCTCGAGTAG 59.038 40.741 23.35 8.76 36.07 2.57
2341 2978 7.880713 ACAGCTGATATTCTTATCTCGAGTAGA 59.119 37.037 23.35 10.92 39.02 2.59
2342 2979 8.892723 CAGCTGATATTCTTATCTCGAGTAGAT 58.107 37.037 8.42 1.28 46.95 1.98
2343 2980 8.892723 AGCTGATATTCTTATCTCGAGTAGATG 58.107 37.037 13.13 1.93 44.95 2.90
2344 2981 8.128582 GCTGATATTCTTATCTCGAGTAGATGG 58.871 40.741 13.13 0.00 44.95 3.51
2345 2982 7.990917 TGATATTCTTATCTCGAGTAGATGGC 58.009 38.462 13.13 5.42 44.95 4.40
2346 2983 7.611855 TGATATTCTTATCTCGAGTAGATGGCA 59.388 37.037 13.13 0.00 44.95 4.92
2347 2984 6.656632 ATTCTTATCTCGAGTAGATGGCAA 57.343 37.500 13.13 0.00 44.95 4.52
2348 2985 5.440234 TCTTATCTCGAGTAGATGGCAAC 57.560 43.478 13.13 0.00 44.95 4.17
2349 2986 2.783828 ATCTCGAGTAGATGGCAACG 57.216 50.000 13.13 0.00 43.62 4.10
2350 2987 0.100682 TCTCGAGTAGATGGCAACGC 59.899 55.000 13.13 0.00 42.51 4.84
2351 2988 4.475312 ATCTCGAGTAGATGGCAACGCC 62.475 54.545 13.13 0.00 43.62 5.68
2361 2998 3.969802 GCAACGCCAGCTGCACTT 61.970 61.111 8.66 0.00 39.16 3.16
2362 2999 2.723746 CAACGCCAGCTGCACTTT 59.276 55.556 8.66 0.00 41.33 2.66
2363 3000 1.370900 CAACGCCAGCTGCACTTTC 60.371 57.895 8.66 0.00 41.33 2.62
2364 3001 1.526917 AACGCCAGCTGCACTTTCT 60.527 52.632 8.66 0.00 41.33 2.52
2365 3002 1.510480 AACGCCAGCTGCACTTTCTC 61.510 55.000 8.66 0.00 41.33 2.87
2366 3003 1.670406 CGCCAGCTGCACTTTCTCT 60.670 57.895 8.66 0.00 41.33 3.10
2367 3004 1.633852 CGCCAGCTGCACTTTCTCTC 61.634 60.000 8.66 0.00 41.33 3.20
2368 3005 1.304509 GCCAGCTGCACTTTCTCTCC 61.305 60.000 8.66 0.00 40.77 3.71
2369 3006 1.018226 CCAGCTGCACTTTCTCTCCG 61.018 60.000 8.66 0.00 0.00 4.63
2370 3007 0.320247 CAGCTGCACTTTCTCTCCGT 60.320 55.000 0.00 0.00 0.00 4.69
2371 3008 0.394565 AGCTGCACTTTCTCTCCGTT 59.605 50.000 1.02 0.00 0.00 4.44
2372 3009 0.793250 GCTGCACTTTCTCTCCGTTC 59.207 55.000 0.00 0.00 0.00 3.95
2373 3010 1.606737 GCTGCACTTTCTCTCCGTTCT 60.607 52.381 0.00 0.00 0.00 3.01
2374 3011 2.352814 GCTGCACTTTCTCTCCGTTCTA 60.353 50.000 0.00 0.00 0.00 2.10
2375 3012 3.677424 GCTGCACTTTCTCTCCGTTCTAT 60.677 47.826 0.00 0.00 0.00 1.98
2376 3013 4.499183 CTGCACTTTCTCTCCGTTCTATT 58.501 43.478 0.00 0.00 0.00 1.73
2377 3014 4.894784 TGCACTTTCTCTCCGTTCTATTT 58.105 39.130 0.00 0.00 0.00 1.40
2378 3015 6.032956 TGCACTTTCTCTCCGTTCTATTTA 57.967 37.500 0.00 0.00 0.00 1.40
2379 3016 6.100004 TGCACTTTCTCTCCGTTCTATTTAG 58.900 40.000 0.00 0.00 0.00 1.85
2380 3017 6.071560 TGCACTTTCTCTCCGTTCTATTTAGA 60.072 38.462 0.00 0.00 0.00 2.10
2381 3018 6.812160 GCACTTTCTCTCCGTTCTATTTAGAA 59.188 38.462 0.00 0.00 39.82 2.10
2382 3019 7.331193 GCACTTTCTCTCCGTTCTATTTAGAAA 59.669 37.037 1.71 0.00 43.30 2.52
2383 3020 9.204570 CACTTTCTCTCCGTTCTATTTAGAAAA 57.795 33.333 1.71 0.00 43.30 2.29
2384 3021 9.774413 ACTTTCTCTCCGTTCTATTTAGAAAAA 57.226 29.630 1.71 0.00 43.30 1.94
2431 3068 8.582433 AAATACTTCAAAAATACCACGGTTTG 57.418 30.769 0.00 0.00 33.26 2.93
2432 3069 5.585820 ACTTCAAAAATACCACGGTTTGT 57.414 34.783 0.00 0.00 33.62 2.83
2444 3081 4.829064 CACGGTTTGTGGGATATTATGG 57.171 45.455 0.00 0.00 45.21 2.74
2445 3082 4.204012 CACGGTTTGTGGGATATTATGGT 58.796 43.478 0.00 0.00 45.21 3.55
2446 3083 4.642885 CACGGTTTGTGGGATATTATGGTT 59.357 41.667 0.00 0.00 45.21 3.67
2447 3084 5.126384 CACGGTTTGTGGGATATTATGGTTT 59.874 40.000 0.00 0.00 45.21 3.27
2448 3085 6.319152 CACGGTTTGTGGGATATTATGGTTTA 59.681 38.462 0.00 0.00 45.21 2.01
2449 3086 6.319405 ACGGTTTGTGGGATATTATGGTTTAC 59.681 38.462 0.00 0.00 0.00 2.01
2450 3087 6.319152 CGGTTTGTGGGATATTATGGTTTACA 59.681 38.462 0.00 0.00 0.00 2.41
2451 3088 7.148052 CGGTTTGTGGGATATTATGGTTTACAA 60.148 37.037 0.00 0.00 0.00 2.41
2452 3089 7.977293 GGTTTGTGGGATATTATGGTTTACAAC 59.023 37.037 0.00 0.00 0.00 3.32
2453 3090 8.524487 GTTTGTGGGATATTATGGTTTACAACA 58.476 33.333 0.00 0.00 0.00 3.33
2454 3091 7.633193 TGTGGGATATTATGGTTTACAACAC 57.367 36.000 0.00 0.00 0.00 3.32
2455 3092 7.406916 TGTGGGATATTATGGTTTACAACACT 58.593 34.615 0.00 0.00 0.00 3.55
2456 3093 7.891183 TGTGGGATATTATGGTTTACAACACTT 59.109 33.333 0.00 0.00 0.00 3.16
2457 3094 8.745590 GTGGGATATTATGGTTTACAACACTTT 58.254 33.333 0.00 0.00 0.00 2.66
2458 3095 8.962679 TGGGATATTATGGTTTACAACACTTTC 58.037 33.333 0.00 0.00 0.00 2.62
2459 3096 8.126700 GGGATATTATGGTTTACAACACTTTCG 58.873 37.037 0.00 0.00 0.00 3.46
2460 3097 8.671028 GGATATTATGGTTTACAACACTTTCGT 58.329 33.333 0.00 0.00 0.00 3.85
2464 3101 8.983307 TTATGGTTTACAACACTTTCGTTTTT 57.017 26.923 0.00 0.00 0.00 1.94
2486 3123 7.769272 TTTTCTAAAGCCAAACACATCAAAG 57.231 32.000 0.00 0.00 0.00 2.77
2487 3124 6.463995 TTCTAAAGCCAAACACATCAAAGT 57.536 33.333 0.00 0.00 0.00 2.66
2488 3125 7.575414 TTCTAAAGCCAAACACATCAAAGTA 57.425 32.000 0.00 0.00 0.00 2.24
2489 3126 7.759489 TCTAAAGCCAAACACATCAAAGTAT 57.241 32.000 0.00 0.00 0.00 2.12
2490 3127 8.177119 TCTAAAGCCAAACACATCAAAGTATT 57.823 30.769 0.00 0.00 0.00 1.89
2491 3128 8.296713 TCTAAAGCCAAACACATCAAAGTATTC 58.703 33.333 0.00 0.00 0.00 1.75
2492 3129 6.403866 AAGCCAAACACATCAAAGTATTCA 57.596 33.333 0.00 0.00 0.00 2.57
2493 3130 6.403866 AGCCAAACACATCAAAGTATTCAA 57.596 33.333 0.00 0.00 0.00 2.69
2494 3131 6.815089 AGCCAAACACATCAAAGTATTCAAA 58.185 32.000 0.00 0.00 0.00 2.69
2495 3132 7.271511 AGCCAAACACATCAAAGTATTCAAAA 58.728 30.769 0.00 0.00 0.00 2.44
2496 3133 7.933033 AGCCAAACACATCAAAGTATTCAAAAT 59.067 29.630 0.00 0.00 0.00 1.82
2497 3134 8.223100 GCCAAACACATCAAAGTATTCAAAATC 58.777 33.333 0.00 0.00 0.00 2.17
2498 3135 9.258826 CCAAACACATCAAAGTATTCAAAATCA 57.741 29.630 0.00 0.00 0.00 2.57
2501 3138 8.991243 ACACATCAAAGTATTCAAAATCATGG 57.009 30.769 0.00 0.00 0.00 3.66
2502 3139 8.587608 ACACATCAAAGTATTCAAAATCATGGT 58.412 29.630 0.00 0.00 0.00 3.55
2503 3140 9.426837 CACATCAAAGTATTCAAAATCATGGTT 57.573 29.630 0.00 0.00 0.00 3.67
2529 3166 9.558396 TTTTTCAAAAACTACGGTATTCTAGGA 57.442 29.630 0.00 0.00 0.00 2.94
2530 3167 9.558396 TTTTCAAAAACTACGGTATTCTAGGAA 57.442 29.630 0.00 0.00 0.00 3.36
2531 3168 9.558396 TTTCAAAAACTACGGTATTCTAGGAAA 57.442 29.630 0.00 0.00 0.00 3.13
2532 3169 9.558396 TTCAAAAACTACGGTATTCTAGGAAAA 57.442 29.630 0.00 0.00 0.00 2.29
2533 3170 8.992073 TCAAAAACTACGGTATTCTAGGAAAAC 58.008 33.333 0.00 0.00 0.00 2.43
2534 3171 8.996271 CAAAAACTACGGTATTCTAGGAAAACT 58.004 33.333 0.00 0.00 0.00 2.66
2536 3173 9.645059 AAAACTACGGTATTCTAGGAAAACTAC 57.355 33.333 0.00 0.00 0.00 2.73
2537 3174 7.944729 ACTACGGTATTCTAGGAAAACTACA 57.055 36.000 0.00 0.00 0.00 2.74
2538 3175 8.353423 ACTACGGTATTCTAGGAAAACTACAA 57.647 34.615 0.00 0.00 0.00 2.41
2539 3176 8.806146 ACTACGGTATTCTAGGAAAACTACAAA 58.194 33.333 0.00 0.00 0.00 2.83
2540 3177 9.643693 CTACGGTATTCTAGGAAAACTACAAAA 57.356 33.333 0.00 0.00 0.00 2.44
2541 3178 8.907222 ACGGTATTCTAGGAAAACTACAAAAA 57.093 30.769 0.00 0.00 0.00 1.94
2542 3179 9.511272 ACGGTATTCTAGGAAAACTACAAAAAT 57.489 29.630 0.00 0.00 0.00 1.82
2550 3187 9.959749 CTAGGAAAACTACAAAAATACTTTGCA 57.040 29.630 0.00 0.00 32.93 4.08
2552 3189 9.476202 AGGAAAACTACAAAAATACTTTGCATC 57.524 29.630 0.00 0.00 32.93 3.91
2553 3190 8.708742 GGAAAACTACAAAAATACTTTGCATCC 58.291 33.333 0.00 0.00 32.93 3.51
2554 3191 9.255304 GAAAACTACAAAAATACTTTGCATCCA 57.745 29.630 0.00 0.00 32.93 3.41
2555 3192 9.606631 AAAACTACAAAAATACTTTGCATCCAA 57.393 25.926 0.00 0.00 32.93 3.53
2556 3193 9.606631 AAACTACAAAAATACTTTGCATCCAAA 57.393 25.926 0.00 0.00 38.56 3.28
2557 3194 8.587952 ACTACAAAAATACTTTGCATCCAAAC 57.412 30.769 0.00 0.00 36.09 2.93
2558 3195 6.523676 ACAAAAATACTTTGCATCCAAACG 57.476 33.333 0.00 0.00 36.09 3.60
2559 3196 5.050431 ACAAAAATACTTTGCATCCAAACGC 60.050 36.000 0.00 0.00 36.09 4.84
2560 3197 3.932545 AATACTTTGCATCCAAACGCA 57.067 38.095 0.00 0.00 36.09 5.24
2561 3198 2.697431 TACTTTGCATCCAAACGCAC 57.303 45.000 0.00 0.00 38.00 5.34
2562 3199 0.031994 ACTTTGCATCCAAACGCACC 59.968 50.000 0.00 0.00 38.00 5.01
2563 3200 0.667184 CTTTGCATCCAAACGCACCC 60.667 55.000 0.00 0.00 38.00 4.61
2564 3201 1.112315 TTTGCATCCAAACGCACCCT 61.112 50.000 0.00 0.00 38.00 4.34
2565 3202 1.112315 TTGCATCCAAACGCACCCTT 61.112 50.000 0.00 0.00 38.00 3.95
2566 3203 0.250945 TGCATCCAAACGCACCCTTA 60.251 50.000 0.00 0.00 31.95 2.69
2567 3204 0.451783 GCATCCAAACGCACCCTTAG 59.548 55.000 0.00 0.00 0.00 2.18
2568 3205 1.821216 CATCCAAACGCACCCTTAGT 58.179 50.000 0.00 0.00 0.00 2.24
2569 3206 2.159382 CATCCAAACGCACCCTTAGTT 58.841 47.619 0.00 0.00 0.00 2.24
2570 3207 2.351706 TCCAAACGCACCCTTAGTTT 57.648 45.000 0.00 0.00 38.46 2.66
2572 3209 1.766069 CAAACGCACCCTTAGTTTGC 58.234 50.000 7.24 0.00 45.02 3.68
2573 3210 0.671796 AAACGCACCCTTAGTTTGCC 59.328 50.000 0.00 0.00 36.81 4.52
2574 3211 0.466555 AACGCACCCTTAGTTTGCCA 60.467 50.000 0.00 0.00 32.31 4.92
2575 3212 0.466555 ACGCACCCTTAGTTTGCCAA 60.467 50.000 0.00 0.00 32.31 4.52
2576 3213 0.039527 CGCACCCTTAGTTTGCCAAC 60.040 55.000 0.00 0.00 32.31 3.77
2577 3214 1.036707 GCACCCTTAGTTTGCCAACA 58.963 50.000 3.22 0.00 35.05 3.33
2578 3215 1.000274 GCACCCTTAGTTTGCCAACAG 60.000 52.381 3.22 0.00 35.05 3.16
2579 3216 1.000274 CACCCTTAGTTTGCCAACAGC 60.000 52.381 3.22 0.00 44.14 4.40
2588 3225 3.018973 GCCAACAGCGTCAACGAA 58.981 55.556 6.75 0.00 43.02 3.85
2589 3226 1.353804 GCCAACAGCGTCAACGAAA 59.646 52.632 6.75 0.00 43.02 3.46
2590 3227 0.248296 GCCAACAGCGTCAACGAAAA 60.248 50.000 6.75 0.00 43.02 2.29
2591 3228 1.741993 CCAACAGCGTCAACGAAAAG 58.258 50.000 6.75 0.00 43.02 2.27
2592 3229 1.112459 CAACAGCGTCAACGAAAAGC 58.888 50.000 6.75 0.00 43.02 3.51
2593 3230 0.730265 AACAGCGTCAACGAAAAGCA 59.270 45.000 6.75 0.00 43.02 3.91
2594 3231 0.304705 ACAGCGTCAACGAAAAGCAG 59.695 50.000 6.75 0.00 43.02 4.24
2595 3232 0.581529 CAGCGTCAACGAAAAGCAGA 59.418 50.000 6.75 0.00 43.02 4.26
2596 3233 0.861837 AGCGTCAACGAAAAGCAGAG 59.138 50.000 6.75 0.00 43.02 3.35
2597 3234 0.722799 GCGTCAACGAAAAGCAGAGC 60.723 55.000 6.75 0.00 43.02 4.09
2598 3235 0.110644 CGTCAACGAAAAGCAGAGCC 60.111 55.000 0.00 0.00 43.02 4.70
2599 3236 1.230324 GTCAACGAAAAGCAGAGCCT 58.770 50.000 0.00 0.00 0.00 4.58
2600 3237 2.413837 GTCAACGAAAAGCAGAGCCTA 58.586 47.619 0.00 0.00 0.00 3.93
2601 3238 2.806244 GTCAACGAAAAGCAGAGCCTAA 59.194 45.455 0.00 0.00 0.00 2.69
2602 3239 2.806244 TCAACGAAAAGCAGAGCCTAAC 59.194 45.455 0.00 0.00 0.00 2.34
2603 3240 2.808543 CAACGAAAAGCAGAGCCTAACT 59.191 45.455 0.00 0.00 0.00 2.24
2604 3241 2.417719 ACGAAAAGCAGAGCCTAACTG 58.582 47.619 0.00 0.00 38.27 3.16
2605 3242 1.734465 CGAAAAGCAGAGCCTAACTGG 59.266 52.381 0.00 0.00 36.09 4.00
2711 3348 6.809630 AAAAGAGCTCACTAGGAATTGAAC 57.190 37.500 17.77 0.00 0.00 3.18
2712 3349 4.479786 AGAGCTCACTAGGAATTGAACC 57.520 45.455 17.77 0.00 0.00 3.62
2713 3350 3.198853 AGAGCTCACTAGGAATTGAACCC 59.801 47.826 17.77 0.00 0.00 4.11
2714 3351 2.912956 AGCTCACTAGGAATTGAACCCA 59.087 45.455 0.00 0.00 0.00 4.51
2715 3352 3.010420 GCTCACTAGGAATTGAACCCAC 58.990 50.000 0.00 0.00 0.00 4.61
2716 3353 3.307762 GCTCACTAGGAATTGAACCCACT 60.308 47.826 0.00 0.00 0.00 4.00
2717 3354 4.081087 GCTCACTAGGAATTGAACCCACTA 60.081 45.833 0.00 0.00 0.00 2.74
2718 3355 5.416271 TCACTAGGAATTGAACCCACTAC 57.584 43.478 0.00 0.00 0.00 2.73
2719 3356 4.224370 TCACTAGGAATTGAACCCACTACC 59.776 45.833 0.00 0.00 0.00 3.18
2720 3357 4.225267 CACTAGGAATTGAACCCACTACCT 59.775 45.833 0.00 0.00 0.00 3.08
2721 3358 3.721087 AGGAATTGAACCCACTACCTG 57.279 47.619 0.00 0.00 0.00 4.00
2722 3359 2.092323 GGAATTGAACCCACTACCTGC 58.908 52.381 0.00 0.00 0.00 4.85
2723 3360 2.290960 GGAATTGAACCCACTACCTGCT 60.291 50.000 0.00 0.00 0.00 4.24
2724 3361 2.496899 ATTGAACCCACTACCTGCTG 57.503 50.000 0.00 0.00 0.00 4.41
2725 3362 0.400213 TTGAACCCACTACCTGCTGG 59.600 55.000 8.29 8.29 39.83 4.85
2727 3364 0.036294 GAACCCACTACCTGCTGGTC 60.036 60.000 19.71 0.00 44.78 4.02
2728 3365 1.827399 AACCCACTACCTGCTGGTCG 61.827 60.000 19.71 15.49 44.78 4.79
2729 3366 1.982395 CCCACTACCTGCTGGTCGA 60.982 63.158 19.71 1.44 44.78 4.20
2734 3371 2.887783 CACTACCTGCTGGTCGAGATAT 59.112 50.000 19.71 0.00 44.78 1.63
3030 3674 2.950990 AGTCTCTAATCACCACCCCT 57.049 50.000 0.00 0.00 0.00 4.79
3032 3676 2.044492 AGTCTCTAATCACCACCCCTCA 59.956 50.000 0.00 0.00 0.00 3.86
3036 3680 2.771943 TCTAATCACCACCCCTCATCAC 59.228 50.000 0.00 0.00 0.00 3.06
3037 3681 1.673767 AATCACCACCCCTCATCACT 58.326 50.000 0.00 0.00 0.00 3.41
3038 3682 1.673767 ATCACCACCCCTCATCACTT 58.326 50.000 0.00 0.00 0.00 3.16
3041 3685 1.065854 CACCACCCCTCATCACTTCTC 60.066 57.143 0.00 0.00 0.00 2.87
3042 3686 1.279496 CCACCCCTCATCACTTCTCA 58.721 55.000 0.00 0.00 0.00 3.27
3043 3687 1.630369 CCACCCCTCATCACTTCTCAA 59.370 52.381 0.00 0.00 0.00 3.02
3044 3688 2.240667 CCACCCCTCATCACTTCTCAAT 59.759 50.000 0.00 0.00 0.00 2.57
3045 3689 3.308688 CCACCCCTCATCACTTCTCAATT 60.309 47.826 0.00 0.00 0.00 2.32
3046 3690 4.338879 CACCCCTCATCACTTCTCAATTT 58.661 43.478 0.00 0.00 0.00 1.82
3047 3691 5.500234 CACCCCTCATCACTTCTCAATTTA 58.500 41.667 0.00 0.00 0.00 1.40
3050 3694 6.830838 ACCCCTCATCACTTCTCAATTTATTC 59.169 38.462 0.00 0.00 0.00 1.75
3053 3697 8.964772 CCCTCATCACTTCTCAATTTATTCTTT 58.035 33.333 0.00 0.00 0.00 2.52
3064 3708 9.408648 TCTCAATTTATTCTTTTATCACCCCTC 57.591 33.333 0.00 0.00 0.00 4.30
3069 3713 9.887862 ATTTATTCTTTTATCACCCCTCATCAT 57.112 29.630 0.00 0.00 0.00 2.45
3070 3714 9.713684 TTTATTCTTTTATCACCCCTCATCATT 57.286 29.630 0.00 0.00 0.00 2.57
3073 3717 5.193527 TCTTTTATCACCCCTCATCATTCCA 59.806 40.000 0.00 0.00 0.00 3.53
3074 3718 5.464588 TTTATCACCCCTCATCATTCCAA 57.535 39.130 0.00 0.00 0.00 3.53
3080 3724 4.280174 CACCCCTCATCATTCCAAATCATC 59.720 45.833 0.00 0.00 0.00 2.92
3082 3726 5.373555 ACCCCTCATCATTCCAAATCATCTA 59.626 40.000 0.00 0.00 0.00 1.98
3084 3728 6.208204 CCCCTCATCATTCCAAATCATCTAAC 59.792 42.308 0.00 0.00 0.00 2.34
3085 3729 7.002879 CCCTCATCATTCCAAATCATCTAACT 58.997 38.462 0.00 0.00 0.00 2.24
3088 3732 8.455903 TCATCATTCCAAATCATCTAACTTCC 57.544 34.615 0.00 0.00 0.00 3.46
3089 3733 7.503566 TCATCATTCCAAATCATCTAACTTCCC 59.496 37.037 0.00 0.00 0.00 3.97
3090 3734 6.730447 TCATTCCAAATCATCTAACTTCCCA 58.270 36.000 0.00 0.00 0.00 4.37
3091 3735 7.181361 TCATTCCAAATCATCTAACTTCCCAA 58.819 34.615 0.00 0.00 0.00 4.12
3092 3736 6.834168 TTCCAAATCATCTAACTTCCCAAC 57.166 37.500 0.00 0.00 0.00 3.77
3093 3737 5.261216 TCCAAATCATCTAACTTCCCAACC 58.739 41.667 0.00 0.00 0.00 3.77
3094 3738 4.096382 CCAAATCATCTAACTTCCCAACCG 59.904 45.833 0.00 0.00 0.00 4.44
3095 3739 3.560636 ATCATCTAACTTCCCAACCGG 57.439 47.619 0.00 0.00 0.00 5.28
3098 3742 1.719529 TCTAACTTCCCAACCGGTCA 58.280 50.000 8.04 0.00 0.00 4.02
3101 3745 2.033602 CTTCCCAACCGGTCACCC 59.966 66.667 8.04 0.00 0.00 4.61
3104 3748 2.045340 CCCAACCGGTCACCCATC 60.045 66.667 8.04 0.00 0.00 3.51
3105 3749 2.045340 CCAACCGGTCACCCATCC 60.045 66.667 8.04 0.00 0.00 3.51
3106 3750 2.045340 CAACCGGTCACCCATCCC 60.045 66.667 8.04 0.00 0.00 3.85
3107 3751 2.204090 AACCGGTCACCCATCCCT 60.204 61.111 8.04 0.00 0.00 4.20
3108 3752 2.298661 AACCGGTCACCCATCCCTC 61.299 63.158 8.04 0.00 0.00 4.30
3111 3755 1.685765 CGGTCACCCATCCCTCTCA 60.686 63.158 0.00 0.00 0.00 3.27
3112 3756 1.908483 GGTCACCCATCCCTCTCAC 59.092 63.158 0.00 0.00 0.00 3.51
3114 3758 1.343075 GGTCACCCATCCCTCTCACTA 60.343 57.143 0.00 0.00 0.00 2.74
3116 3760 1.646447 TCACCCATCCCTCTCACTACT 59.354 52.381 0.00 0.00 0.00 2.57
3117 3761 2.035632 CACCCATCCCTCTCACTACTC 58.964 57.143 0.00 0.00 0.00 2.59
3119 3763 1.062886 CCCATCCCTCTCACTACTCCA 60.063 57.143 0.00 0.00 0.00 3.86
3120 3764 2.315176 CCATCCCTCTCACTACTCCAG 58.685 57.143 0.00 0.00 0.00 3.86
3121 3765 1.686052 CATCCCTCTCACTACTCCAGC 59.314 57.143 0.00 0.00 0.00 4.85
3123 3767 1.045911 CCCTCTCACTACTCCAGCCC 61.046 65.000 0.00 0.00 0.00 5.19
3125 3769 1.561643 CTCTCACTACTCCAGCCCAA 58.438 55.000 0.00 0.00 0.00 4.12
3126 3770 1.480137 CTCTCACTACTCCAGCCCAAG 59.520 57.143 0.00 0.00 0.00 3.61
3128 3772 0.835971 TCACTACTCCAGCCCAAGCA 60.836 55.000 0.00 0.00 43.56 3.91
3129 3773 0.674895 CACTACTCCAGCCCAAGCAC 60.675 60.000 0.00 0.00 43.56 4.40
3132 3776 4.711949 CTCCAGCCCAAGCACGCT 62.712 66.667 0.00 0.00 43.56 5.07
3136 3780 1.210155 CAGCCCAAGCACGCTTAAC 59.790 57.895 3.53 0.00 43.56 2.01
3137 3781 1.073199 AGCCCAAGCACGCTTAACT 59.927 52.632 3.53 0.00 43.56 2.24
3138 3782 0.537371 AGCCCAAGCACGCTTAACTT 60.537 50.000 3.53 0.00 43.56 2.66
3140 3784 0.521735 CCCAAGCACGCTTAACTTCC 59.478 55.000 3.53 0.00 34.50 3.46
3141 3785 0.165944 CCAAGCACGCTTAACTTCCG 59.834 55.000 3.53 0.00 34.50 4.30
3142 3786 0.165944 CAAGCACGCTTAACTTCCGG 59.834 55.000 3.53 0.00 34.50 5.14
3143 3787 0.953960 AAGCACGCTTAACTTCCGGG 60.954 55.000 0.00 0.00 34.05 5.73
3144 3788 1.670083 GCACGCTTAACTTCCGGGT 60.670 57.895 0.00 0.00 0.00 5.28
3145 3789 1.232621 GCACGCTTAACTTCCGGGTT 61.233 55.000 0.00 0.60 0.00 4.11
3148 3792 1.895131 ACGCTTAACTTCCGGGTTCTA 59.105 47.619 0.00 0.00 0.00 2.10
3150 3794 3.055602 ACGCTTAACTTCCGGGTTCTATT 60.056 43.478 0.00 0.00 0.00 1.73
3151 3795 3.554731 CGCTTAACTTCCGGGTTCTATTC 59.445 47.826 0.00 0.00 0.00 1.75
3152 3796 4.679905 CGCTTAACTTCCGGGTTCTATTCT 60.680 45.833 0.00 0.00 0.00 2.40
3153 3797 4.809958 GCTTAACTTCCGGGTTCTATTCTC 59.190 45.833 0.00 0.00 0.00 2.87
3154 3798 3.908643 AACTTCCGGGTTCTATTCTCC 57.091 47.619 0.00 0.00 0.00 3.71
3155 3799 2.117051 ACTTCCGGGTTCTATTCTCCC 58.883 52.381 0.00 0.00 37.98 4.30
3156 3800 2.116238 CTTCCGGGTTCTATTCTCCCA 58.884 52.381 0.00 0.00 41.12 4.37
3157 3801 1.492764 TCCGGGTTCTATTCTCCCAC 58.507 55.000 0.00 0.00 41.12 4.61
3158 3802 0.104304 CCGGGTTCTATTCTCCCACG 59.896 60.000 0.00 0.00 41.12 4.94
3159 3803 0.529992 CGGGTTCTATTCTCCCACGC 60.530 60.000 0.00 0.00 41.12 5.34
3162 3806 1.202545 GGTTCTATTCTCCCACGCTCC 60.203 57.143 0.00 0.00 0.00 4.70
3163 3807 1.480954 GTTCTATTCTCCCACGCTCCA 59.519 52.381 0.00 0.00 0.00 3.86
3164 3808 1.860641 TCTATTCTCCCACGCTCCAA 58.139 50.000 0.00 0.00 0.00 3.53
3165 3809 1.757118 TCTATTCTCCCACGCTCCAAG 59.243 52.381 0.00 0.00 0.00 3.61
3168 3812 0.832135 TTCTCCCACGCTCCAAGTCT 60.832 55.000 0.00 0.00 0.00 3.24
3169 3813 1.079543 CTCCCACGCTCCAAGTCTG 60.080 63.158 0.00 0.00 0.00 3.51
3171 3815 2.031012 CCACGCTCCAAGTCTGCA 59.969 61.111 0.00 0.00 0.00 4.41
3173 3817 1.301244 CACGCTCCAAGTCTGCACT 60.301 57.895 0.00 0.00 0.00 4.40
3174 3818 0.882042 CACGCTCCAAGTCTGCACTT 60.882 55.000 0.00 0.00 44.26 3.16
3184 3828 3.782889 AGTCTGCACTTGTTGTTTTCC 57.217 42.857 0.00 0.00 0.00 3.13
3187 3831 3.128589 GTCTGCACTTGTTGTTTTCCTGA 59.871 43.478 0.00 0.00 0.00 3.86
3188 3832 3.128589 TCTGCACTTGTTGTTTTCCTGAC 59.871 43.478 0.00 0.00 0.00 3.51
3189 3833 2.822561 TGCACTTGTTGTTTTCCTGACA 59.177 40.909 0.00 0.00 0.00 3.58
3190 3834 3.256879 TGCACTTGTTGTTTTCCTGACAA 59.743 39.130 0.00 0.00 34.83 3.18
3192 3836 5.126222 TGCACTTGTTGTTTTCCTGACAATA 59.874 36.000 0.00 0.00 39.03 1.90
3193 3837 6.039616 GCACTTGTTGTTTTCCTGACAATAA 58.960 36.000 0.00 0.00 39.03 1.40
3195 3839 7.865385 GCACTTGTTGTTTTCCTGACAATAATA 59.135 33.333 0.00 0.00 37.44 0.98
3196 3840 9.743057 CACTTGTTGTTTTCCTGACAATAATAA 57.257 29.630 0.00 0.00 37.44 1.40
3220 3864 8.970859 AAGATGTCAATCCTATTAACCTTCAG 57.029 34.615 0.00 0.00 32.77 3.02
3221 3865 7.512992 AGATGTCAATCCTATTAACCTTCAGG 58.487 38.462 0.00 0.00 35.81 3.86
3222 3866 6.884472 TGTCAATCCTATTAACCTTCAGGA 57.116 37.500 0.00 0.00 41.31 3.86
3224 3868 7.872138 TGTCAATCCTATTAACCTTCAGGAAT 58.128 34.615 0.00 0.00 40.48 3.01
3225 3869 8.336235 TGTCAATCCTATTAACCTTCAGGAATT 58.664 33.333 0.00 0.00 40.48 2.17
3226 3870 9.190317 GTCAATCCTATTAACCTTCAGGAATTT 57.810 33.333 0.00 0.00 40.48 1.82
3228 3872 9.807649 CAATCCTATTAACCTTCAGGAATTTTG 57.192 33.333 0.00 0.00 40.48 2.44
3230 3874 7.182060 TCCTATTAACCTTCAGGAATTTTGCT 58.818 34.615 0.00 0.00 38.94 3.91
3231 3875 7.673926 TCCTATTAACCTTCAGGAATTTTGCTT 59.326 33.333 0.00 0.00 38.94 3.91
3234 3878 4.861102 ACCTTCAGGAATTTTGCTTGAG 57.139 40.909 0.00 0.00 38.94 3.02
3235 3879 3.006217 ACCTTCAGGAATTTTGCTTGAGC 59.994 43.478 0.00 0.00 39.13 4.26
3236 3880 3.006110 CCTTCAGGAATTTTGCTTGAGCA 59.994 43.478 0.68 0.68 43.53 4.26
3238 3882 6.361513 CCTTCAGGAATTTTGCTTGAGCATG 61.362 44.000 6.50 0.60 44.23 4.06
3239 3883 8.459621 CCTTCAGGAATTTTGCTTGAGCATGA 62.460 42.308 6.50 3.04 44.23 3.07
3240 3884 9.822332 CCTTCAGGAATTTTGCTTGAGCATGAA 62.822 40.741 6.50 10.32 44.23 2.57
3247 3891 2.608467 GCTTGAGCATGAAGTGACAC 57.392 50.000 0.00 0.00 41.59 3.67
3248 3892 1.875514 GCTTGAGCATGAAGTGACACA 59.124 47.619 8.59 0.00 41.59 3.72
3249 3893 2.486982 GCTTGAGCATGAAGTGACACAT 59.513 45.455 8.59 0.00 41.59 3.21
3250 3894 3.057736 GCTTGAGCATGAAGTGACACATT 60.058 43.478 8.59 0.00 41.59 2.71
3251 3895 4.558095 GCTTGAGCATGAAGTGACACATTT 60.558 41.667 8.59 0.00 41.59 2.32
3252 3896 5.518848 TTGAGCATGAAGTGACACATTTT 57.481 34.783 8.59 0.00 0.00 1.82
3253 3897 6.631971 TTGAGCATGAAGTGACACATTTTA 57.368 33.333 8.59 0.00 0.00 1.52
3255 3899 5.764686 TGAGCATGAAGTGACACATTTTACT 59.235 36.000 8.59 0.00 0.00 2.24
3257 3901 5.532406 AGCATGAAGTGACACATTTTACTGT 59.468 36.000 8.59 0.00 0.00 3.55
3259 3903 6.697019 GCATGAAGTGACACATTTTACTGTTT 59.303 34.615 8.59 0.00 0.00 2.83
3260 3904 7.306167 GCATGAAGTGACACATTTTACTGTTTG 60.306 37.037 8.59 0.00 0.00 2.93
3261 3905 7.384439 TGAAGTGACACATTTTACTGTTTGA 57.616 32.000 8.59 0.00 0.00 2.69
3262 3906 7.471721 TGAAGTGACACATTTTACTGTTTGAG 58.528 34.615 8.59 0.00 0.00 3.02
3263 3907 7.120579 TGAAGTGACACATTTTACTGTTTGAGT 59.879 33.333 8.59 0.00 38.88 3.41
3264 3908 7.391148 AGTGACACATTTTACTGTTTGAGTT 57.609 32.000 8.59 0.00 35.96 3.01
3266 3910 7.754924 AGTGACACATTTTACTGTTTGAGTTTG 59.245 33.333 8.59 0.00 35.96 2.93
3268 3912 8.300286 TGACACATTTTACTGTTTGAGTTTGAA 58.700 29.630 0.00 0.00 35.96 2.69
3269 3913 9.134734 GACACATTTTACTGTTTGAGTTTGAAA 57.865 29.630 0.00 0.00 35.96 2.69
3270 3914 8.921670 ACACATTTTACTGTTTGAGTTTGAAAC 58.078 29.630 0.00 0.00 35.96 2.78
3279 3923 9.705290 ACTGTTTGAGTTTGAAACTATTGTTTT 57.295 25.926 11.01 0.00 45.36 2.43
3346 3990 4.385358 AGTTTGACCATTGTTTGACCAC 57.615 40.909 0.00 0.00 0.00 4.16
3357 4001 2.752354 TGTTTGACCACAGTTTGACCAG 59.248 45.455 0.00 0.00 0.00 4.00
3359 4003 3.576078 TTGACCACAGTTTGACCAGAT 57.424 42.857 0.00 0.00 0.00 2.90
3362 4006 3.631686 TGACCACAGTTTGACCAGATTTG 59.368 43.478 0.00 0.00 0.00 2.32
3363 4007 3.882888 GACCACAGTTTGACCAGATTTGA 59.117 43.478 0.00 0.00 0.00 2.69
3364 4008 3.632145 ACCACAGTTTGACCAGATTTGAC 59.368 43.478 0.00 0.00 0.00 3.18
3366 4010 3.631686 CACAGTTTGACCAGATTTGACCA 59.368 43.478 0.00 0.00 0.00 4.02
3368 4012 4.709397 ACAGTTTGACCAGATTTGACCAAA 59.291 37.500 0.00 0.00 34.46 3.28
3370 4014 6.127083 ACAGTTTGACCAGATTTGACCAAAAT 60.127 34.615 0.00 0.00 41.33 1.82
3372 4016 6.762661 AGTTTGACCAGATTTGACCAAAATTG 59.237 34.615 0.00 1.94 38.64 2.32
3373 4017 6.477053 TTGACCAGATTTGACCAAAATTGA 57.523 33.333 0.00 0.00 38.64 2.57
3374 4018 6.477053 TGACCAGATTTGACCAAAATTGAA 57.523 33.333 0.00 0.00 38.64 2.69
3377 4021 8.646004 TGACCAGATTTGACCAAAATTGAAATA 58.354 29.630 0.00 0.00 38.64 1.40
3441 4085 9.705290 AATAATTAGTTTGACCATTGTTTGACC 57.295 29.630 0.00 0.00 0.00 4.02
3442 4086 6.723298 ATTAGTTTGACCATTGTTTGACCA 57.277 33.333 0.00 0.00 0.00 4.02
3443 4087 6.723298 TTAGTTTGACCATTGTTTGACCAT 57.277 33.333 0.00 0.00 0.00 3.55
3445 4089 6.331369 AGTTTGACCATTGTTTGACCATAG 57.669 37.500 0.00 0.00 0.00 2.23
3447 4091 6.323739 AGTTTGACCATTGTTTGACCATAGTT 59.676 34.615 0.00 0.00 0.00 2.24
3448 4092 6.723298 TTGACCATTGTTTGACCATAGTTT 57.277 33.333 0.00 0.00 0.00 2.66
3449 4093 6.083098 TGACCATTGTTTGACCATAGTTTG 57.917 37.500 0.00 0.00 0.00 2.93
3450 4094 4.881920 ACCATTGTTTGACCATAGTTTGC 58.118 39.130 0.00 0.00 0.00 3.68
3451 4095 4.244862 CCATTGTTTGACCATAGTTTGCC 58.755 43.478 0.00 0.00 0.00 4.52
3452 4096 4.244862 CATTGTTTGACCATAGTTTGCCC 58.755 43.478 0.00 0.00 0.00 5.36
3457 4101 1.423541 TGACCATAGTTTGCCCACTGT 59.576 47.619 0.00 0.00 0.00 3.55
3458 4102 2.158534 TGACCATAGTTTGCCCACTGTT 60.159 45.455 0.00 0.00 0.00 3.16
3459 4103 2.890945 GACCATAGTTTGCCCACTGTTT 59.109 45.455 0.00 0.00 0.00 2.83
3460 4104 2.627699 ACCATAGTTTGCCCACTGTTTG 59.372 45.455 0.00 0.00 0.00 2.93
3464 4108 5.184864 CCATAGTTTGCCCACTGTTTGAATA 59.815 40.000 0.00 0.00 0.00 1.75
3465 4109 6.127366 CCATAGTTTGCCCACTGTTTGAATAT 60.127 38.462 0.00 0.00 0.00 1.28
3466 4110 5.806654 AGTTTGCCCACTGTTTGAATATT 57.193 34.783 0.00 0.00 0.00 1.28
3467 4111 6.173427 AGTTTGCCCACTGTTTGAATATTT 57.827 33.333 0.00 0.00 0.00 1.40
3468 4112 6.591001 AGTTTGCCCACTGTTTGAATATTTT 58.409 32.000 0.00 0.00 0.00 1.82
3470 4114 7.226523 AGTTTGCCCACTGTTTGAATATTTTTC 59.773 33.333 0.00 0.00 0.00 2.29
3472 4116 6.586344 TGCCCACTGTTTGAATATTTTTCAA 58.414 32.000 0.00 0.00 36.71 2.69
3474 4118 7.718753 TGCCCACTGTTTGAATATTTTTCAATT 59.281 29.630 3.59 0.00 38.12 2.32
3498 4142 7.907214 TTTTTCCACTCTAGATCTTACAAGC 57.093 36.000 0.00 0.00 0.00 4.01
3499 4143 5.599999 TTCCACTCTAGATCTTACAAGCC 57.400 43.478 0.00 0.00 0.00 4.35
3500 4144 3.961408 TCCACTCTAGATCTTACAAGCCC 59.039 47.826 0.00 0.00 0.00 5.19
3501 4145 3.070302 CCACTCTAGATCTTACAAGCCCC 59.930 52.174 0.00 0.00 0.00 5.80
3502 4146 2.959707 ACTCTAGATCTTACAAGCCCCG 59.040 50.000 0.00 0.00 0.00 5.73
3503 4147 2.959707 CTCTAGATCTTACAAGCCCCGT 59.040 50.000 0.00 0.00 0.00 5.28
3504 4148 4.142790 CTCTAGATCTTACAAGCCCCGTA 58.857 47.826 0.00 0.00 0.00 4.02
3505 4149 4.539726 TCTAGATCTTACAAGCCCCGTAA 58.460 43.478 0.00 0.00 0.00 3.18
3506 4150 3.538634 AGATCTTACAAGCCCCGTAAC 57.461 47.619 0.00 0.00 0.00 2.50
3507 4151 3.105283 AGATCTTACAAGCCCCGTAACT 58.895 45.455 0.00 0.00 0.00 2.24
3550 4194 7.938563 TGAGGATTTTGAAAATGTTTAACGG 57.061 32.000 8.03 0.00 0.00 4.44
3555 4199 6.905544 TTTTGAAAATGTTTAACGGGGTTC 57.094 33.333 0.00 0.00 0.00 3.62
3557 4201 3.321396 TGAAAATGTTTAACGGGGTTCCC 59.679 43.478 0.00 0.00 41.09 3.97
3687 8023 4.412843 GGGGGTTAGAGTTTGAAAATGGA 58.587 43.478 0.00 0.00 0.00 3.41
3976 8374 4.223032 ACGGAAGCCTCTTTTTCTATCAGA 59.777 41.667 0.00 0.00 0.00 3.27
3977 8375 5.104735 ACGGAAGCCTCTTTTTCTATCAGAT 60.105 40.000 0.00 0.00 0.00 2.90
3978 8376 5.236047 CGGAAGCCTCTTTTTCTATCAGATG 59.764 44.000 0.00 0.00 0.00 2.90
3979 8377 5.008514 GGAAGCCTCTTTTTCTATCAGATGC 59.991 44.000 0.00 0.00 0.00 3.91
3980 8378 5.108187 AGCCTCTTTTTCTATCAGATGCA 57.892 39.130 0.00 0.00 32.36 3.96
3981 8379 4.880696 AGCCTCTTTTTCTATCAGATGCAC 59.119 41.667 0.00 0.00 32.36 4.57
4012 8410 1.134995 GGCAGGGCTATGCTTGTTTTC 60.135 52.381 13.46 0.00 45.75 2.29
4013 8411 1.545582 GCAGGGCTATGCTTGTTTTCA 59.454 47.619 7.79 0.00 43.07 2.69
4036 8434 9.692749 TTCATGTATCTAATTTAGGTTAGCTCG 57.307 33.333 3.66 0.00 32.85 5.03
4058 8456 8.217778 GCTCGATTTTATACTCTATTTGTGAGC 58.782 37.037 0.00 0.00 35.12 4.26
4075 8473 2.998949 CGGGGAAAAGAGAGGGGG 59.001 66.667 0.00 0.00 0.00 5.40
4076 8474 2.684104 GGGGAAAAGAGAGGGGGC 59.316 66.667 0.00 0.00 0.00 5.80
4093 8491 1.045407 GGCAGACCCATATGGACGTA 58.955 55.000 24.00 0.00 37.39 3.57
4096 8494 2.545952 GCAGACCCATATGGACGTACTG 60.546 54.545 24.00 20.94 37.39 2.74
4203 8601 3.745975 TGAATTGCGGTAGTGTCAAGAAG 59.254 43.478 0.00 0.00 0.00 2.85
4248 8646 6.938507 AGGGAGTACAACGTAAATAACATGA 58.061 36.000 0.00 0.00 0.00 3.07
4279 8677 4.543689 ACTCCCGGACATGATAACTTAGA 58.456 43.478 0.73 0.00 0.00 2.10
4407 8814 8.611654 AACTTAGGTACAAACAACACGATAAT 57.388 30.769 0.00 0.00 0.00 1.28
4790 9211 1.474017 CGATACTTAGGTGAACCGCG 58.526 55.000 0.00 0.00 42.08 6.46
4791 9212 1.206523 GATACTTAGGTGAACCGCGC 58.793 55.000 0.00 0.00 42.08 6.86
4793 9214 2.546645 TACTTAGGTGAACCGCGCGG 62.547 60.000 44.88 44.88 42.08 6.46
4822 9269 4.226761 GTGTACTTTGTGTGCAAATAGCC 58.773 43.478 0.00 0.00 42.63 3.93
4828 9275 1.065053 TGTGTGCAAATAGCCCGGTAT 60.065 47.619 0.00 0.00 44.83 2.73
4829 9276 2.021457 GTGTGCAAATAGCCCGGTATT 58.979 47.619 0.00 0.00 44.83 1.89
4830 9277 2.020720 TGTGCAAATAGCCCGGTATTG 58.979 47.619 0.00 0.00 44.83 1.90
4831 9278 2.021457 GTGCAAATAGCCCGGTATTGT 58.979 47.619 0.00 0.00 44.83 2.71
4832 9279 3.207778 GTGCAAATAGCCCGGTATTGTA 58.792 45.455 0.00 0.00 44.83 2.41
4833 9280 3.002965 GTGCAAATAGCCCGGTATTGTAC 59.997 47.826 0.00 4.24 44.83 2.90
4844 9291 3.609373 CCGGTATTGTACTTGTACACACG 59.391 47.826 12.51 13.16 0.00 4.49
4907 9354 5.867330 TGACCCCGAGATAAAAGTTTGTTA 58.133 37.500 0.00 0.00 0.00 2.41
4938 9385 6.676950 TGCCTTGATAACTTGTGTGTAAATG 58.323 36.000 0.00 0.00 0.00 2.32
4940 9387 7.176515 TGCCTTGATAACTTGTGTGTAAATGAT 59.823 33.333 0.00 0.00 0.00 2.45
5076 9524 5.463392 ACATGATAATACACGCACATGAGAC 59.537 40.000 0.00 0.00 38.55 3.36
5137 9591 8.284557 TGAACGATGAAATGAAAATTGTTGAG 57.715 30.769 0.00 0.00 29.87 3.02
5154 9608 8.924511 ATTGTTGAGAAACATATCCCGATAAT 57.075 30.769 0.00 0.00 32.01 1.28
5199 9653 4.275936 ACACAACAAAGCTGATAACTCACC 59.724 41.667 0.00 0.00 0.00 4.02
5226 9680 7.384660 GCAAACATCATAATCACTTTTTGACCA 59.615 33.333 0.00 0.00 36.92 4.02
5327 9781 8.414003 GTGATAACTTACATAGTCCAGATGTGA 58.586 37.037 0.00 0.00 38.03 3.58
5389 9847 4.569761 TGGGATCTAGTTTCGAAGATCG 57.430 45.455 15.31 0.00 46.01 3.69
5443 9907 2.048127 AGAGCGACGGTTTGAGCC 60.048 61.111 0.00 0.00 0.00 4.70
5545 10011 7.194278 TGTAATTAGATAGAGAAGTGCACGTC 58.806 38.462 23.14 23.14 0.00 4.34
5612 10079 6.253727 AGAGTGAAGTAAATATCGTTCTTGCG 59.746 38.462 0.00 0.00 0.00 4.85
5645 10112 7.529880 AAATCCGAACGTTTGGTAGTTATAG 57.470 36.000 29.59 5.52 33.22 1.31
5689 10156 1.517242 CTTGTGTCAGGTCTCCAAGC 58.483 55.000 0.00 0.00 0.00 4.01
5690 10157 0.108585 TTGTGTCAGGTCTCCAAGCC 59.891 55.000 0.00 0.00 0.00 4.35
5712 10179 2.159653 GCTGTCAAGTGTAAGAATGGCG 60.160 50.000 0.00 0.00 0.00 5.69
5737 10204 2.886124 GTACGAGAGCAAGGCCGC 60.886 66.667 0.00 0.00 0.00 6.53
5753 10220 2.755469 GCGGGGCATGTGGACAAT 60.755 61.111 0.00 0.00 0.00 2.71
5778 10245 3.003173 CCTTCAGCGTCCCCCTGA 61.003 66.667 0.00 0.00 37.54 3.86
5783 10250 4.003788 AGCGTCCCCCTGAACGTG 62.004 66.667 0.00 0.00 0.00 4.49
5883 10350 0.254178 GCAAGAGCCCTCCAAGATCA 59.746 55.000 0.00 0.00 33.58 2.92
5953 10420 4.657824 CGAGGTGCACCGACCGTT 62.658 66.667 29.68 11.83 41.35 4.44
6007 10474 1.870055 CTGCACAATCACCACCTGGC 61.870 60.000 0.00 0.00 39.32 4.85
6028 10495 0.321653 GTCTTCCACAAGCCCGTGAT 60.322 55.000 4.72 0.00 39.34 3.06
6034 10501 3.177600 CAAGCCCGTGATTGTCCG 58.822 61.111 0.00 0.00 33.23 4.79
6047 10520 3.782443 GTCCGTCCCAAGCCCGAT 61.782 66.667 0.00 0.00 0.00 4.18
6051 10566 1.153168 CGTCCCAAGCCCGATCATT 60.153 57.895 0.00 0.00 0.00 2.57
6053 10568 1.594331 GTCCCAAGCCCGATCATTAC 58.406 55.000 0.00 0.00 0.00 1.89
6056 10571 1.202927 CCCAAGCCCGATCATTACCAT 60.203 52.381 0.00 0.00 0.00 3.55
6095 10628 1.606480 GGCCACGATCACGATCATGAT 60.606 52.381 8.25 8.25 42.15 2.45
6107 10640 2.728318 CGATCATGATCATCACCACGAC 59.272 50.000 30.13 4.78 37.69 4.34
6110 10643 2.159057 TCATGATCATCACCACGACCAG 60.159 50.000 4.86 0.00 0.00 4.00
6111 10644 0.536724 TGATCATCACCACGACCAGG 59.463 55.000 0.00 0.00 0.00 4.45
6112 10645 0.824109 GATCATCACCACGACCAGGA 59.176 55.000 0.00 0.00 0.00 3.86
6125 10658 3.160047 CAGGATCTCCCGCCTGCT 61.160 66.667 0.00 0.00 44.53 4.24
6128 10661 2.107953 GATCTCCCGCCTGCTGTC 59.892 66.667 0.00 0.00 0.00 3.51
6129 10662 2.685017 ATCTCCCGCCTGCTGTCA 60.685 61.111 0.00 0.00 0.00 3.58
6130 10663 2.244117 GATCTCCCGCCTGCTGTCAA 62.244 60.000 0.00 0.00 0.00 3.18
6166 10699 2.180017 GGTGTACACGCCGACGAT 59.820 61.111 19.41 0.00 43.93 3.73
6191 10724 2.507854 CCCCACGCCGATCTACCAT 61.508 63.158 0.00 0.00 0.00 3.55
6195 10728 1.456892 ACGCCGATCTACCATCCCA 60.457 57.895 0.00 0.00 0.00 4.37
6196 10729 1.006102 CGCCGATCTACCATCCCAC 60.006 63.158 0.00 0.00 0.00 4.61
6247 10780 2.839425 AGCTCTTCAAGAAGATGCTCCT 59.161 45.455 20.80 9.40 45.40 3.69
6263 10796 2.234908 GCTCCTGTTCCTCAAGAAGCTA 59.765 50.000 0.00 0.00 34.29 3.32
6272 10805 3.056749 TCCTCAAGAAGCTACCGTTCTTC 60.057 47.826 0.00 5.53 41.37 2.87
6355 10891 1.408702 GCTCTTTTGGTTGAAGCCACA 59.591 47.619 0.00 0.00 38.42 4.17
6356 10892 2.799562 GCTCTTTTGGTTGAAGCCACAC 60.800 50.000 0.00 0.00 38.42 3.82
6361 10897 0.179032 TGGTTGAAGCCACACACGAT 60.179 50.000 0.00 0.00 32.81 3.73
6364 10900 2.223711 GGTTGAAGCCACACACGATTTT 60.224 45.455 0.00 0.00 0.00 1.82
6390 10965 5.184864 TCCACAAAATAATGTTTGCGAGGAT 59.815 36.000 0.00 0.00 41.33 3.24
6402 11014 4.944962 TTGCGAGGATGATTGTTAGTTG 57.055 40.909 0.00 0.00 0.00 3.16
6467 11084 5.918011 TGTTTTGTGTGTTTGTTTCACTCTC 59.082 36.000 0.00 0.00 36.83 3.20
6473 11090 6.542005 TGTGTGTTTGTTTCACTCTCATGTAT 59.458 34.615 0.00 0.00 36.83 2.29
6482 11099 5.890424 TCACTCTCATGTATCGTGTGTAA 57.110 39.130 0.00 0.00 0.00 2.41
6483 11100 6.451064 TCACTCTCATGTATCGTGTGTAAT 57.549 37.500 0.00 0.00 0.00 1.89
6484 11101 7.562454 TCACTCTCATGTATCGTGTGTAATA 57.438 36.000 0.00 0.00 0.00 0.98
6485 11102 7.415229 TCACTCTCATGTATCGTGTGTAATAC 58.585 38.462 0.00 0.00 0.00 1.89
6599 11221 8.409358 AATAGTTTCATGCTGTAAGAACCTTT 57.591 30.769 0.00 0.00 34.07 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 3.117776 TCCTATAGGGACTTAGCACGACA 60.118 47.826 18.97 0.00 41.75 4.35
33 34 1.911269 TTCTGGTGCGCTGGTCCTA 60.911 57.895 9.73 0.00 0.00 2.94
105 106 2.564771 GATCGGGTCTTCATTCATGCA 58.435 47.619 0.00 0.00 0.00 3.96
113 114 1.974957 TCTGTTTGGATCGGGTCTTCA 59.025 47.619 0.00 0.00 0.00 3.02
120 121 1.668419 GGTGGATCTGTTTGGATCGG 58.332 55.000 0.00 0.00 41.99 4.18
121 122 1.134818 TCGGTGGATCTGTTTGGATCG 60.135 52.381 0.00 0.00 41.99 3.69
162 163 1.071542 TGCCTCCGACAAATCTCACAA 59.928 47.619 0.00 0.00 0.00 3.33
165 166 0.684535 TGTGCCTCCGACAAATCTCA 59.315 50.000 0.00 0.00 0.00 3.27
171 172 2.425592 CAGGTGTGCCTCCGACAA 59.574 61.111 0.00 0.00 44.97 3.18
223 224 3.728373 CCCTGGCTAGCCCCGTTT 61.728 66.667 30.81 0.00 34.56 3.60
235 236 6.886459 TGAAGATGAAATAAACTTCTCCCTGG 59.114 38.462 0.00 0.00 39.28 4.45
237 238 7.115414 CCTGAAGATGAAATAAACTTCTCCCT 58.885 38.462 0.00 0.00 39.28 4.20
246 247 4.199310 CGCCTCCCTGAAGATGAAATAAA 58.801 43.478 0.00 0.00 0.00 1.40
252 253 0.614697 TGACGCCTCCCTGAAGATGA 60.615 55.000 0.00 0.00 0.00 2.92
273 274 0.803117 CTACTCACGAAGACGAGGCA 59.197 55.000 0.00 0.00 42.66 4.75
448 451 5.450550 GGTTCCTCTGACTCCAAAAACAAAG 60.451 44.000 0.00 0.00 0.00 2.77
452 455 2.885266 GGGTTCCTCTGACTCCAAAAAC 59.115 50.000 0.00 0.00 0.00 2.43
459 462 2.180276 TGCTTAGGGTTCCTCTGACTC 58.820 52.381 0.00 0.00 34.61 3.36
525 530 4.771360 GCAATACATTGTTGCCAAAACAC 58.229 39.130 2.62 0.00 44.65 3.32
565 570 9.914131 GCAAATACTGAAAAGAGGAATAGTTTT 57.086 29.630 0.00 0.00 0.00 2.43
568 573 6.183360 GCGCAAATACTGAAAAGAGGAATAGT 60.183 38.462 0.30 0.00 0.00 2.12
653 662 0.178831 AGGGGAGGGTGGATGAAAGT 60.179 55.000 0.00 0.00 0.00 2.66
661 670 2.074948 CCAGATCAGGGGAGGGTGG 61.075 68.421 0.00 0.00 0.00 4.61
671 680 3.303881 TCAAGTTGTCGACCAGATCAG 57.696 47.619 14.12 0.00 0.00 2.90
761 770 7.068839 TCAGATATACTCTTCCAGTTCCAAGTC 59.931 40.741 0.00 0.00 36.43 3.01
763 772 7.353414 TCAGATATACTCTTCCAGTTCCAAG 57.647 40.000 0.00 0.00 36.43 3.61
851 860 5.195379 CCGTAAGTGAAAAAGTGAAGAACG 58.805 41.667 0.00 0.00 0.00 3.95
901 910 6.229936 TCCTTTATATAGGCGTCAAACACT 57.770 37.500 4.43 0.00 35.15 3.55
1046 1059 4.147449 CGAGGCCGATCACCAGCA 62.147 66.667 0.00 0.00 38.22 4.41
1052 1065 1.447838 GAGTTTGCGAGGCCGATCA 60.448 57.895 0.00 0.00 38.22 2.92
1065 1078 1.956170 CTCGCCGTGCACAGAGTTT 60.956 57.895 18.64 0.00 0.00 2.66
1144 1157 0.890996 CCTTTGAAAGCTGCCTCGGT 60.891 55.000 0.00 0.00 0.00 4.69
1186 1199 3.452755 AACTTTGTGGGCAAACTAAGC 57.547 42.857 11.59 0.00 39.43 3.09
1187 1200 7.262048 TCTAAAAACTTTGTGGGCAAACTAAG 58.738 34.615 10.56 10.56 39.43 2.18
1191 1204 4.270084 GCTCTAAAAACTTTGTGGGCAAAC 59.730 41.667 0.00 0.00 39.43 2.93
1192 1205 4.081420 TGCTCTAAAAACTTTGTGGGCAAA 60.081 37.500 0.00 0.00 41.77 3.68
1194 1207 3.027412 TGCTCTAAAAACTTTGTGGGCA 58.973 40.909 0.00 0.00 30.77 5.36
1195 1208 3.317993 TCTGCTCTAAAAACTTTGTGGGC 59.682 43.478 0.00 0.00 0.00 5.36
1196 1209 5.010012 ACATCTGCTCTAAAAACTTTGTGGG 59.990 40.000 0.00 0.00 0.00 4.61
1197 1210 5.916883 CACATCTGCTCTAAAAACTTTGTGG 59.083 40.000 0.00 0.00 0.00 4.17
1198 1211 6.498304 ACACATCTGCTCTAAAAACTTTGTG 58.502 36.000 0.00 0.00 37.38 3.33
1199 1212 6.699575 ACACATCTGCTCTAAAAACTTTGT 57.300 33.333 0.00 0.00 0.00 2.83
1200 1213 7.587757 GTGTACACATCTGCTCTAAAAACTTTG 59.412 37.037 21.14 0.00 0.00 2.77
1325 1338 2.073816 CAGATGTCACCCAACGTTACC 58.926 52.381 0.00 0.00 0.00 2.85
1342 1355 3.365666 CGTGTAGCTCGGTTAGTTTCAGA 60.366 47.826 0.00 0.00 0.00 3.27
1354 1367 0.525668 CAGTTAGGCCGTGTAGCTCG 60.526 60.000 0.00 0.00 0.00 5.03
1479 1535 5.048294 TGCCACATGCTATTCATCAATCATC 60.048 40.000 0.00 0.00 42.00 2.92
1492 1548 3.009723 GAGCTTAAGTTGCCACATGCTA 58.990 45.455 4.02 0.00 42.00 3.49
1585 1704 9.006839 CGGATATATATGCTAGGTAACCGATTA 57.993 37.037 11.88 0.00 38.09 1.75
1630 1750 0.486879 ATTGGCCCTTGTCCTTGGAA 59.513 50.000 0.00 0.00 0.00 3.53
1651 1771 3.227614 TGGGTAGCGCACTGATTAGATA 58.772 45.455 11.47 0.00 0.00 1.98
1670 1790 4.499696 GGGCTGTCGATTAATTTTGGATGG 60.500 45.833 0.00 0.00 0.00 3.51
1693 1813 3.443037 CACGCTTCTCCATAGAGTCTTG 58.557 50.000 0.00 0.00 41.26 3.02
1701 1821 2.168313 TGATCTTGCACGCTTCTCCATA 59.832 45.455 0.00 0.00 0.00 2.74
1772 1892 1.753847 GCTGCAAGGGGTGGCATATAA 60.754 52.381 0.00 0.00 39.65 0.98
2203 2840 9.938670 CGGAAATTACATATACCGAATTGAAAA 57.061 29.630 0.00 0.00 42.40 2.29
2204 2841 9.327628 TCGGAAATTACATATACCGAATTGAAA 57.672 29.630 0.00 0.00 44.76 2.69
2205 2842 8.890124 TCGGAAATTACATATACCGAATTGAA 57.110 30.769 0.00 0.00 44.76 2.69
2211 2848 7.167968 CGAAAGTTCGGAAATTACATATACCGA 59.832 37.037 3.65 0.00 46.30 4.69
2212 2849 7.278629 CGAAAGTTCGGAAATTACATATACCG 58.721 38.462 3.65 0.00 46.30 4.02
2229 2866 7.321745 ACCTGATGATAAAATCCGAAAGTTC 57.678 36.000 0.00 0.00 0.00 3.01
2230 2867 6.318900 GGACCTGATGATAAAATCCGAAAGTT 59.681 38.462 0.00 0.00 0.00 2.66
2231 2868 5.823045 GGACCTGATGATAAAATCCGAAAGT 59.177 40.000 0.00 0.00 0.00 2.66
2232 2869 6.305693 GGACCTGATGATAAAATCCGAAAG 57.694 41.667 0.00 0.00 0.00 2.62
2236 2873 3.990092 TCGGACCTGATGATAAAATCCG 58.010 45.455 3.42 3.42 46.99 4.18
2237 2874 4.211374 CGTTCGGACCTGATGATAAAATCC 59.789 45.833 0.00 0.00 0.00 3.01
2238 2875 5.047847 TCGTTCGGACCTGATGATAAAATC 58.952 41.667 0.00 0.00 0.00 2.17
2239 2876 5.018539 TCGTTCGGACCTGATGATAAAAT 57.981 39.130 0.00 0.00 0.00 1.82
2240 2877 4.459390 TCGTTCGGACCTGATGATAAAA 57.541 40.909 0.00 0.00 0.00 1.52
2241 2878 4.142026 ACATCGTTCGGACCTGATGATAAA 60.142 41.667 16.03 0.00 40.45 1.40
2242 2879 3.383505 ACATCGTTCGGACCTGATGATAA 59.616 43.478 16.03 0.00 40.45 1.75
2243 2880 2.956333 ACATCGTTCGGACCTGATGATA 59.044 45.455 16.03 0.00 40.45 2.15
2244 2881 1.757118 ACATCGTTCGGACCTGATGAT 59.243 47.619 16.03 6.43 40.45 2.45
2245 2882 1.182667 ACATCGTTCGGACCTGATGA 58.817 50.000 16.03 4.67 40.45 2.92
2246 2883 1.660607 CAACATCGTTCGGACCTGATG 59.339 52.381 9.46 9.46 42.95 3.07
2247 2884 1.275291 ACAACATCGTTCGGACCTGAT 59.725 47.619 0.00 0.00 0.00 2.90
2248 2885 0.677288 ACAACATCGTTCGGACCTGA 59.323 50.000 0.00 0.00 0.00 3.86
2249 2886 2.259618 CTACAACATCGTTCGGACCTG 58.740 52.381 0.00 0.00 0.00 4.00
2250 2887 1.403780 GCTACAACATCGTTCGGACCT 60.404 52.381 0.00 0.00 0.00 3.85
2251 2888 0.997196 GCTACAACATCGTTCGGACC 59.003 55.000 0.00 0.00 0.00 4.46
2252 2889 1.992170 AGCTACAACATCGTTCGGAC 58.008 50.000 0.00 0.00 0.00 4.79
2253 2890 3.547413 CGATAGCTACAACATCGTTCGGA 60.547 47.826 7.51 0.00 37.40 4.55
2254 2891 2.719556 CGATAGCTACAACATCGTTCGG 59.280 50.000 7.51 0.00 37.40 4.30
2255 2892 3.614588 TCGATAGCTACAACATCGTTCG 58.385 45.455 13.85 8.15 41.67 3.95
2256 2893 3.975670 CCTCGATAGCTACAACATCGTTC 59.024 47.826 13.85 0.00 41.67 3.95
2257 2894 3.630769 TCCTCGATAGCTACAACATCGTT 59.369 43.478 13.85 0.00 41.67 3.85
2258 2895 3.211865 TCCTCGATAGCTACAACATCGT 58.788 45.455 13.85 0.00 41.67 3.73
2259 2896 3.898517 TCCTCGATAGCTACAACATCG 57.101 47.619 9.12 9.12 42.18 3.84
2260 2897 6.903883 TTTTTCCTCGATAGCTACAACATC 57.096 37.500 0.00 0.00 0.00 3.06
2283 2920 8.646900 CCTTCTAATATTCCTAGTGAGCTCTTT 58.353 37.037 16.19 5.53 0.00 2.52
2284 2921 7.256154 GCCTTCTAATATTCCTAGTGAGCTCTT 60.256 40.741 16.19 5.91 0.00 2.85
2285 2922 6.210584 GCCTTCTAATATTCCTAGTGAGCTCT 59.789 42.308 16.19 0.00 0.00 4.09
2286 2923 6.394809 GCCTTCTAATATTCCTAGTGAGCTC 58.605 44.000 6.82 6.82 0.00 4.09
2287 2924 5.047660 CGCCTTCTAATATTCCTAGTGAGCT 60.048 44.000 0.00 0.00 0.00 4.09
2288 2925 5.047943 TCGCCTTCTAATATTCCTAGTGAGC 60.048 44.000 0.00 0.00 0.00 4.26
2289 2926 6.576662 TCGCCTTCTAATATTCCTAGTGAG 57.423 41.667 0.00 0.00 0.00 3.51
2290 2927 6.719829 TGATCGCCTTCTAATATTCCTAGTGA 59.280 38.462 0.00 0.00 0.00 3.41
2291 2928 6.809196 GTGATCGCCTTCTAATATTCCTAGTG 59.191 42.308 0.00 0.00 0.00 2.74
2292 2929 6.493802 TGTGATCGCCTTCTAATATTCCTAGT 59.506 38.462 3.31 0.00 0.00 2.57
2293 2930 6.925211 TGTGATCGCCTTCTAATATTCCTAG 58.075 40.000 3.31 0.00 0.00 3.02
2294 2931 6.572509 GCTGTGATCGCCTTCTAATATTCCTA 60.573 42.308 3.31 0.00 0.00 2.94
2295 2932 5.788450 CTGTGATCGCCTTCTAATATTCCT 58.212 41.667 3.31 0.00 0.00 3.36
2296 2933 4.390297 GCTGTGATCGCCTTCTAATATTCC 59.610 45.833 3.31 0.00 0.00 3.01
2297 2934 5.119898 CAGCTGTGATCGCCTTCTAATATTC 59.880 44.000 5.25 0.00 0.00 1.75
2298 2935 4.993584 CAGCTGTGATCGCCTTCTAATATT 59.006 41.667 5.25 0.00 0.00 1.28
2299 2936 4.281941 TCAGCTGTGATCGCCTTCTAATAT 59.718 41.667 14.67 0.00 0.00 1.28
2300 2937 3.636764 TCAGCTGTGATCGCCTTCTAATA 59.363 43.478 14.67 0.00 0.00 0.98
2301 2938 2.432146 TCAGCTGTGATCGCCTTCTAAT 59.568 45.455 14.67 0.00 0.00 1.73
2302 2939 1.824852 TCAGCTGTGATCGCCTTCTAA 59.175 47.619 14.67 0.00 0.00 2.10
2303 2940 1.474330 TCAGCTGTGATCGCCTTCTA 58.526 50.000 14.67 0.00 0.00 2.10
2304 2941 0.829333 ATCAGCTGTGATCGCCTTCT 59.171 50.000 14.67 0.00 39.37 2.85
2305 2942 2.515926 TATCAGCTGTGATCGCCTTC 57.484 50.000 14.67 0.00 42.80 3.46
2306 2943 3.070734 AGAATATCAGCTGTGATCGCCTT 59.929 43.478 14.67 0.00 42.80 4.35
2307 2944 2.632028 AGAATATCAGCTGTGATCGCCT 59.368 45.455 14.67 1.12 42.80 5.52
2308 2945 3.037431 AGAATATCAGCTGTGATCGCC 57.963 47.619 14.67 0.00 42.80 5.54
2309 2946 6.098679 AGATAAGAATATCAGCTGTGATCGC 58.901 40.000 14.67 0.00 42.80 4.58
2310 2947 6.468637 CGAGATAAGAATATCAGCTGTGATCG 59.531 42.308 14.67 3.10 42.80 3.69
2311 2948 7.534282 TCGAGATAAGAATATCAGCTGTGATC 58.466 38.462 14.67 8.36 42.80 2.92
2312 2949 7.176515 ACTCGAGATAAGAATATCAGCTGTGAT 59.823 37.037 21.68 5.44 45.82 3.06
2313 2950 6.488344 ACTCGAGATAAGAATATCAGCTGTGA 59.512 38.462 21.68 2.94 40.41 3.58
2314 2951 6.676950 ACTCGAGATAAGAATATCAGCTGTG 58.323 40.000 21.68 0.00 40.41 3.66
2315 2952 6.892658 ACTCGAGATAAGAATATCAGCTGT 57.107 37.500 21.68 3.75 40.41 4.40
2316 2953 8.262715 TCTACTCGAGATAAGAATATCAGCTG 57.737 38.462 21.68 7.63 40.41 4.24
2317 2954 8.892723 CATCTACTCGAGATAAGAATATCAGCT 58.107 37.037 21.68 0.00 43.52 4.24
2318 2955 8.128582 CCATCTACTCGAGATAAGAATATCAGC 58.871 40.741 21.68 0.00 43.52 4.26
2319 2956 8.128582 GCCATCTACTCGAGATAAGAATATCAG 58.871 40.741 21.68 6.74 43.52 2.90
2320 2957 7.611855 TGCCATCTACTCGAGATAAGAATATCA 59.388 37.037 21.68 11.72 43.52 2.15
2321 2958 7.990917 TGCCATCTACTCGAGATAAGAATATC 58.009 38.462 21.68 9.71 43.52 1.63
2322 2959 7.946381 TGCCATCTACTCGAGATAAGAATAT 57.054 36.000 21.68 1.65 43.52 1.28
2323 2960 7.573283 CGTTGCCATCTACTCGAGATAAGAATA 60.573 40.741 21.68 0.00 43.52 1.75
2324 2961 6.451393 GTTGCCATCTACTCGAGATAAGAAT 58.549 40.000 21.68 0.00 43.52 2.40
2325 2962 5.505819 CGTTGCCATCTACTCGAGATAAGAA 60.506 44.000 21.68 1.31 43.52 2.52
2326 2963 4.023963 CGTTGCCATCTACTCGAGATAAGA 60.024 45.833 21.68 17.87 43.52 2.10
2327 2964 4.222886 CGTTGCCATCTACTCGAGATAAG 58.777 47.826 21.68 13.12 43.52 1.73
2328 2965 3.550233 GCGTTGCCATCTACTCGAGATAA 60.550 47.826 21.68 3.50 43.52 1.75
2329 2966 2.031069 GCGTTGCCATCTACTCGAGATA 60.031 50.000 21.68 6.98 43.52 1.98
2330 2967 1.269309 GCGTTGCCATCTACTCGAGAT 60.269 52.381 21.68 6.08 46.52 2.75
2331 2968 0.100682 GCGTTGCCATCTACTCGAGA 59.899 55.000 21.68 0.00 39.01 4.04
2332 2969 2.582959 GCGTTGCCATCTACTCGAG 58.417 57.895 11.84 11.84 0.00 4.04
2333 2970 4.806571 GCGTTGCCATCTACTCGA 57.193 55.556 0.00 0.00 0.00 4.04
2349 2986 1.304509 GGAGAGAAAGTGCAGCTGGC 61.305 60.000 17.12 8.54 45.13 4.85
2350 2987 1.018226 CGGAGAGAAAGTGCAGCTGG 61.018 60.000 17.12 0.00 0.00 4.85
2351 2988 0.320247 ACGGAGAGAAAGTGCAGCTG 60.320 55.000 10.11 10.11 0.00 4.24
2352 2989 0.394565 AACGGAGAGAAAGTGCAGCT 59.605 50.000 0.00 0.00 0.00 4.24
2353 2990 0.793250 GAACGGAGAGAAAGTGCAGC 59.207 55.000 0.00 0.00 0.00 5.25
2354 2991 2.447244 AGAACGGAGAGAAAGTGCAG 57.553 50.000 0.00 0.00 0.00 4.41
2355 2992 4.537135 AATAGAACGGAGAGAAAGTGCA 57.463 40.909 0.00 0.00 0.00 4.57
2356 2993 6.331061 TCTAAATAGAACGGAGAGAAAGTGC 58.669 40.000 0.00 0.00 0.00 4.40
2357 2994 8.758633 TTTCTAAATAGAACGGAGAGAAAGTG 57.241 34.615 2.42 0.00 41.64 3.16
2358 2995 9.774413 TTTTTCTAAATAGAACGGAGAGAAAGT 57.226 29.630 2.42 0.00 41.64 2.66
2405 3042 9.680315 CAAACCGTGGTATTTTTGAAGTATTTA 57.320 29.630 0.00 0.00 31.79 1.40
2406 3043 8.198778 ACAAACCGTGGTATTTTTGAAGTATTT 58.801 29.630 7.90 0.00 33.90 1.40
2407 3044 7.650104 CACAAACCGTGGTATTTTTGAAGTATT 59.350 33.333 7.90 0.00 42.34 1.89
2408 3045 7.142680 CACAAACCGTGGTATTTTTGAAGTAT 58.857 34.615 7.90 0.00 42.34 2.12
2409 3046 6.496571 CACAAACCGTGGTATTTTTGAAGTA 58.503 36.000 7.90 0.00 42.34 2.24
2410 3047 5.344884 CACAAACCGTGGTATTTTTGAAGT 58.655 37.500 7.90 0.00 42.34 3.01
2411 3048 5.881637 CACAAACCGTGGTATTTTTGAAG 57.118 39.130 7.90 0.00 42.34 3.02
2423 3060 4.204012 ACCATAATATCCCACAAACCGTG 58.796 43.478 0.00 0.00 45.92 4.94
2424 3061 4.513406 ACCATAATATCCCACAAACCGT 57.487 40.909 0.00 0.00 0.00 4.83
2425 3062 5.845391 AAACCATAATATCCCACAAACCG 57.155 39.130 0.00 0.00 0.00 4.44
2426 3063 7.648039 TGTAAACCATAATATCCCACAAACC 57.352 36.000 0.00 0.00 0.00 3.27
2427 3064 8.920509 GTTGTAAACCATAATATCCCACAAAC 57.079 34.615 0.00 0.00 42.21 2.93
2461 3098 7.821846 ACTTTGATGTGTTTGGCTTTAGAAAAA 59.178 29.630 0.00 0.00 0.00 1.94
2462 3099 7.327214 ACTTTGATGTGTTTGGCTTTAGAAAA 58.673 30.769 0.00 0.00 0.00 2.29
2463 3100 6.872920 ACTTTGATGTGTTTGGCTTTAGAAA 58.127 32.000 0.00 0.00 0.00 2.52
2464 3101 6.463995 ACTTTGATGTGTTTGGCTTTAGAA 57.536 33.333 0.00 0.00 0.00 2.10
2465 3102 7.759489 ATACTTTGATGTGTTTGGCTTTAGA 57.241 32.000 0.00 0.00 0.00 2.10
2466 3103 8.081633 TGAATACTTTGATGTGTTTGGCTTTAG 58.918 33.333 0.00 0.00 0.00 1.85
2467 3104 7.946207 TGAATACTTTGATGTGTTTGGCTTTA 58.054 30.769 0.00 0.00 0.00 1.85
2468 3105 6.815089 TGAATACTTTGATGTGTTTGGCTTT 58.185 32.000 0.00 0.00 0.00 3.51
2469 3106 6.403866 TGAATACTTTGATGTGTTTGGCTT 57.596 33.333 0.00 0.00 0.00 4.35
2470 3107 6.403866 TTGAATACTTTGATGTGTTTGGCT 57.596 33.333 0.00 0.00 0.00 4.75
2471 3108 7.475771 TTTTGAATACTTTGATGTGTTTGGC 57.524 32.000 0.00 0.00 0.00 4.52
2472 3109 9.258826 TGATTTTGAATACTTTGATGTGTTTGG 57.741 29.630 0.00 0.00 0.00 3.28
2475 3112 9.426837 CCATGATTTTGAATACTTTGATGTGTT 57.573 29.630 0.00 0.00 0.00 3.32
2476 3113 8.587608 ACCATGATTTTGAATACTTTGATGTGT 58.412 29.630 0.00 0.00 0.00 3.72
2477 3114 8.991243 ACCATGATTTTGAATACTTTGATGTG 57.009 30.769 0.00 0.00 0.00 3.21
2503 3140 9.558396 TCCTAGAATACCGTAGTTTTTGAAAAA 57.442 29.630 0.00 0.00 0.00 1.94
2504 3141 9.558396 TTCCTAGAATACCGTAGTTTTTGAAAA 57.442 29.630 0.00 0.00 0.00 2.29
2505 3142 9.558396 TTTCCTAGAATACCGTAGTTTTTGAAA 57.442 29.630 0.00 0.00 0.00 2.69
2506 3143 9.558396 TTTTCCTAGAATACCGTAGTTTTTGAA 57.442 29.630 0.00 0.00 0.00 2.69
2507 3144 8.992073 GTTTTCCTAGAATACCGTAGTTTTTGA 58.008 33.333 0.00 0.00 0.00 2.69
2508 3145 8.996271 AGTTTTCCTAGAATACCGTAGTTTTTG 58.004 33.333 0.00 0.00 0.00 2.44
2510 3147 9.645059 GTAGTTTTCCTAGAATACCGTAGTTTT 57.355 33.333 0.00 0.00 0.00 2.43
2511 3148 8.806146 TGTAGTTTTCCTAGAATACCGTAGTTT 58.194 33.333 0.00 0.00 0.00 2.66
2512 3149 8.353423 TGTAGTTTTCCTAGAATACCGTAGTT 57.647 34.615 0.00 0.00 0.00 2.24
2513 3150 7.944729 TGTAGTTTTCCTAGAATACCGTAGT 57.055 36.000 0.00 0.00 0.00 2.73
2514 3151 9.643693 TTTTGTAGTTTTCCTAGAATACCGTAG 57.356 33.333 0.00 0.00 29.81 3.51
2515 3152 9.995003 TTTTTGTAGTTTTCCTAGAATACCGTA 57.005 29.630 0.00 0.00 29.81 4.02
2516 3153 8.907222 TTTTTGTAGTTTTCCTAGAATACCGT 57.093 30.769 0.00 0.00 29.81 4.83
2524 3161 9.959749 TGCAAAGTATTTTTGTAGTTTTCCTAG 57.040 29.630 0.00 0.00 35.03 3.02
2526 3163 9.476202 GATGCAAAGTATTTTTGTAGTTTTCCT 57.524 29.630 0.00 0.00 35.03 3.36
2527 3164 8.708742 GGATGCAAAGTATTTTTGTAGTTTTCC 58.291 33.333 0.00 0.00 35.03 3.13
2528 3165 9.255304 TGGATGCAAAGTATTTTTGTAGTTTTC 57.745 29.630 0.00 0.00 35.03 2.29
2529 3166 9.606631 TTGGATGCAAAGTATTTTTGTAGTTTT 57.393 25.926 0.00 0.00 35.03 2.43
2530 3167 9.606631 TTTGGATGCAAAGTATTTTTGTAGTTT 57.393 25.926 8.47 0.00 35.03 2.66
2531 3168 9.040939 GTTTGGATGCAAAGTATTTTTGTAGTT 57.959 29.630 13.15 0.00 35.03 2.24
2532 3169 7.381139 CGTTTGGATGCAAAGTATTTTTGTAGT 59.619 33.333 13.15 0.00 35.03 2.73
2533 3170 7.619161 GCGTTTGGATGCAAAGTATTTTTGTAG 60.619 37.037 13.15 0.00 35.03 2.74
2534 3171 6.144724 GCGTTTGGATGCAAAGTATTTTTGTA 59.855 34.615 13.15 0.00 35.03 2.41
2535 3172 5.050431 GCGTTTGGATGCAAAGTATTTTTGT 60.050 36.000 13.15 0.00 35.03 2.83
2536 3173 5.050499 TGCGTTTGGATGCAAAGTATTTTTG 60.050 36.000 13.15 0.00 44.47 2.44
2537 3174 5.053145 TGCGTTTGGATGCAAAGTATTTTT 58.947 33.333 13.15 0.00 44.47 1.94
2538 3175 4.626042 TGCGTTTGGATGCAAAGTATTTT 58.374 34.783 13.15 0.00 44.47 1.82
2539 3176 4.250116 TGCGTTTGGATGCAAAGTATTT 57.750 36.364 13.15 0.00 44.47 1.40
2540 3177 3.932545 TGCGTTTGGATGCAAAGTATT 57.067 38.095 13.15 0.00 44.47 1.89
2547 3184 0.250945 TAAGGGTGCGTTTGGATGCA 60.251 50.000 0.00 0.00 45.21 3.96
2548 3185 0.451783 CTAAGGGTGCGTTTGGATGC 59.548 55.000 0.00 0.00 38.31 3.91
2549 3186 1.821216 ACTAAGGGTGCGTTTGGATG 58.179 50.000 0.00 0.00 0.00 3.51
2550 3187 2.556622 CAAACTAAGGGTGCGTTTGGAT 59.443 45.455 0.00 0.00 42.12 3.41
2551 3188 1.950909 CAAACTAAGGGTGCGTTTGGA 59.049 47.619 0.00 0.00 42.12 3.53
2552 3189 1.601914 GCAAACTAAGGGTGCGTTTGG 60.602 52.381 13.78 0.03 44.53 3.28
2553 3190 1.601914 GGCAAACTAAGGGTGCGTTTG 60.602 52.381 9.12 9.12 46.15 2.93
2554 3191 0.671796 GGCAAACTAAGGGTGCGTTT 59.328 50.000 0.00 0.00 39.22 3.60
2555 3192 0.466555 TGGCAAACTAAGGGTGCGTT 60.467 50.000 0.00 0.00 39.22 4.84
2556 3193 0.466555 TTGGCAAACTAAGGGTGCGT 60.467 50.000 0.00 0.00 39.22 5.24
2557 3194 0.039527 GTTGGCAAACTAAGGGTGCG 60.040 55.000 0.00 0.00 39.22 5.34
2558 3195 1.000274 CTGTTGGCAAACTAAGGGTGC 60.000 52.381 0.00 0.00 37.19 5.01
2559 3196 1.000274 GCTGTTGGCAAACTAAGGGTG 60.000 52.381 0.00 0.00 41.35 4.61
2560 3197 1.328279 GCTGTTGGCAAACTAAGGGT 58.672 50.000 0.00 0.00 41.35 4.34
2561 3198 0.240945 CGCTGTTGGCAAACTAAGGG 59.759 55.000 0.00 0.00 41.91 3.95
2562 3199 0.951558 ACGCTGTTGGCAAACTAAGG 59.048 50.000 0.00 0.00 41.91 2.69
2563 3200 1.601903 TGACGCTGTTGGCAAACTAAG 59.398 47.619 0.00 0.00 41.91 2.18
2564 3201 1.669604 TGACGCTGTTGGCAAACTAA 58.330 45.000 0.00 0.00 41.91 2.24
2565 3202 1.332375 GTTGACGCTGTTGGCAAACTA 59.668 47.619 0.00 0.00 41.91 2.24
2566 3203 0.100503 GTTGACGCTGTTGGCAAACT 59.899 50.000 0.00 0.00 41.91 2.66
2567 3204 1.199852 CGTTGACGCTGTTGGCAAAC 61.200 55.000 0.00 0.00 41.91 2.93
2568 3205 1.063327 CGTTGACGCTGTTGGCAAA 59.937 52.632 0.00 0.00 41.91 3.68
2569 3206 1.369839 TTCGTTGACGCTGTTGGCAA 61.370 50.000 0.00 0.00 41.91 4.52
2570 3207 1.369839 TTTCGTTGACGCTGTTGGCA 61.370 50.000 0.00 0.00 41.91 4.92
2571 3208 0.248296 TTTTCGTTGACGCTGTTGGC 60.248 50.000 0.00 0.00 39.60 4.52
2572 3209 1.741993 CTTTTCGTTGACGCTGTTGG 58.258 50.000 0.00 0.00 39.60 3.77
2573 3210 1.112459 GCTTTTCGTTGACGCTGTTG 58.888 50.000 0.00 0.00 39.60 3.33
2574 3211 0.730265 TGCTTTTCGTTGACGCTGTT 59.270 45.000 0.00 0.00 39.60 3.16
2575 3212 0.304705 CTGCTTTTCGTTGACGCTGT 59.695 50.000 0.00 0.00 39.60 4.40
2576 3213 0.581529 TCTGCTTTTCGTTGACGCTG 59.418 50.000 0.00 0.00 39.60 5.18
2577 3214 0.861837 CTCTGCTTTTCGTTGACGCT 59.138 50.000 0.00 0.00 39.60 5.07
2578 3215 0.722799 GCTCTGCTTTTCGTTGACGC 60.723 55.000 0.00 0.00 39.60 5.19
2579 3216 0.110644 GGCTCTGCTTTTCGTTGACG 60.111 55.000 0.00 0.00 41.45 4.35
2580 3217 1.230324 AGGCTCTGCTTTTCGTTGAC 58.770 50.000 0.00 0.00 0.00 3.18
2581 3218 2.806244 GTTAGGCTCTGCTTTTCGTTGA 59.194 45.455 0.00 0.00 0.00 3.18
2582 3219 2.808543 AGTTAGGCTCTGCTTTTCGTTG 59.191 45.455 0.00 0.00 0.00 4.10
2583 3220 2.808543 CAGTTAGGCTCTGCTTTTCGTT 59.191 45.455 0.00 0.00 0.00 3.85
2584 3221 2.417719 CAGTTAGGCTCTGCTTTTCGT 58.582 47.619 0.00 0.00 0.00 3.85
2585 3222 1.734465 CCAGTTAGGCTCTGCTTTTCG 59.266 52.381 0.00 0.00 0.00 3.46
2597 3234 4.485163 CGAATTGAAAAAGGCCAGTTAGG 58.515 43.478 5.01 0.00 41.84 2.69
2598 3235 4.022329 ACCGAATTGAAAAAGGCCAGTTAG 60.022 41.667 5.01 0.00 0.00 2.34
2599 3236 3.892588 ACCGAATTGAAAAAGGCCAGTTA 59.107 39.130 5.01 0.00 0.00 2.24
2600 3237 2.698274 ACCGAATTGAAAAAGGCCAGTT 59.302 40.909 5.01 0.00 0.00 3.16
2601 3238 2.316108 ACCGAATTGAAAAAGGCCAGT 58.684 42.857 5.01 0.00 0.00 4.00
2602 3239 4.718940 ATACCGAATTGAAAAAGGCCAG 57.281 40.909 5.01 0.00 0.00 4.85
2603 3240 5.654650 ACATATACCGAATTGAAAAAGGCCA 59.345 36.000 5.01 0.00 0.00 5.36
2604 3241 6.144078 ACATATACCGAATTGAAAAAGGCC 57.856 37.500 0.00 0.00 0.00 5.19
2605 3242 9.744468 AATTACATATACCGAATTGAAAAAGGC 57.256 29.630 0.00 0.00 0.00 4.35
2707 3344 2.066340 CCAGCAGGTAGTGGGTTCA 58.934 57.895 0.00 0.00 0.00 3.18
2718 3355 2.230025 CCAGTATATCTCGACCAGCAGG 59.770 54.545 0.00 0.00 42.21 4.85
2719 3356 2.887783 ACCAGTATATCTCGACCAGCAG 59.112 50.000 0.00 0.00 0.00 4.24
2720 3357 2.623416 CACCAGTATATCTCGACCAGCA 59.377 50.000 0.00 0.00 0.00 4.41
2721 3358 2.029828 CCACCAGTATATCTCGACCAGC 60.030 54.545 0.00 0.00 0.00 4.85
2722 3359 3.487372 TCCACCAGTATATCTCGACCAG 58.513 50.000 0.00 0.00 0.00 4.00
2723 3360 3.588210 TCCACCAGTATATCTCGACCA 57.412 47.619 0.00 0.00 0.00 4.02
2724 3361 4.931661 TTTCCACCAGTATATCTCGACC 57.068 45.455 0.00 0.00 0.00 4.79
2725 3362 5.753921 CCTTTTTCCACCAGTATATCTCGAC 59.246 44.000 0.00 0.00 0.00 4.20
2726 3363 5.163343 CCCTTTTTCCACCAGTATATCTCGA 60.163 44.000 0.00 0.00 0.00 4.04
2727 3364 5.057149 CCCTTTTTCCACCAGTATATCTCG 58.943 45.833 0.00 0.00 0.00 4.04
2728 3365 6.002653 ACCCTTTTTCCACCAGTATATCTC 57.997 41.667 0.00 0.00 0.00 2.75
2729 3366 5.731678 AGACCCTTTTTCCACCAGTATATCT 59.268 40.000 0.00 0.00 0.00 1.98
2734 3371 4.211920 CAAAGACCCTTTTTCCACCAGTA 58.788 43.478 0.00 0.00 0.00 2.74
3004 3648 4.957327 GGTGGTGATTAGAGACTAGAGGTT 59.043 45.833 0.00 0.00 0.00 3.50
3005 3649 4.538738 GGTGGTGATTAGAGACTAGAGGT 58.461 47.826 0.00 0.00 0.00 3.85
3006 3650 3.892588 GGGTGGTGATTAGAGACTAGAGG 59.107 52.174 0.00 0.00 0.00 3.69
3007 3651 3.892588 GGGGTGGTGATTAGAGACTAGAG 59.107 52.174 0.00 0.00 0.00 2.43
3008 3652 3.532232 AGGGGTGGTGATTAGAGACTAGA 59.468 47.826 0.00 0.00 0.00 2.43
3010 3654 3.271225 TGAGGGGTGGTGATTAGAGACTA 59.729 47.826 0.00 0.00 0.00 2.59
3011 3655 2.044492 TGAGGGGTGGTGATTAGAGACT 59.956 50.000 0.00 0.00 0.00 3.24
3012 3656 2.467880 TGAGGGGTGGTGATTAGAGAC 58.532 52.381 0.00 0.00 0.00 3.36
3014 3658 3.041211 TGATGAGGGGTGGTGATTAGAG 58.959 50.000 0.00 0.00 0.00 2.43
3015 3659 2.771943 GTGATGAGGGGTGGTGATTAGA 59.228 50.000 0.00 0.00 0.00 2.10
3016 3660 2.774234 AGTGATGAGGGGTGGTGATTAG 59.226 50.000 0.00 0.00 0.00 1.73
3017 3661 2.845659 AGTGATGAGGGGTGGTGATTA 58.154 47.619 0.00 0.00 0.00 1.75
3018 3662 1.673767 AGTGATGAGGGGTGGTGATT 58.326 50.000 0.00 0.00 0.00 2.57
3019 3663 1.561542 GAAGTGATGAGGGGTGGTGAT 59.438 52.381 0.00 0.00 0.00 3.06
3021 3665 0.987294 AGAAGTGATGAGGGGTGGTG 59.013 55.000 0.00 0.00 0.00 4.17
3023 3667 1.279496 TGAGAAGTGATGAGGGGTGG 58.721 55.000 0.00 0.00 0.00 4.61
3037 3681 9.768215 AGGGGTGATAAAAGAATAAATTGAGAA 57.232 29.630 0.00 0.00 0.00 2.87
3038 3682 9.408648 GAGGGGTGATAAAAGAATAAATTGAGA 57.591 33.333 0.00 0.00 0.00 3.27
3041 3685 9.971922 GATGAGGGGTGATAAAAGAATAAATTG 57.028 33.333 0.00 0.00 0.00 2.32
3042 3686 9.713684 TGATGAGGGGTGATAAAAGAATAAATT 57.286 29.630 0.00 0.00 0.00 1.82
3043 3687 9.887862 ATGATGAGGGGTGATAAAAGAATAAAT 57.112 29.630 0.00 0.00 0.00 1.40
3044 3688 9.713684 AATGATGAGGGGTGATAAAAGAATAAA 57.286 29.630 0.00 0.00 0.00 1.40
3045 3689 9.354673 GAATGATGAGGGGTGATAAAAGAATAA 57.645 33.333 0.00 0.00 0.00 1.40
3046 3690 7.944554 GGAATGATGAGGGGTGATAAAAGAATA 59.055 37.037 0.00 0.00 0.00 1.75
3047 3691 6.779539 GGAATGATGAGGGGTGATAAAAGAAT 59.220 38.462 0.00 0.00 0.00 2.40
3050 3694 5.448654 TGGAATGATGAGGGGTGATAAAAG 58.551 41.667 0.00 0.00 0.00 2.27
3053 3697 5.464588 TTTGGAATGATGAGGGGTGATAA 57.535 39.130 0.00 0.00 0.00 1.75
3055 3699 4.079038 TGATTTGGAATGATGAGGGGTGAT 60.079 41.667 0.00 0.00 0.00 3.06
3057 3701 3.634504 TGATTTGGAATGATGAGGGGTG 58.365 45.455 0.00 0.00 0.00 4.61
3059 3703 4.737578 AGATGATTTGGAATGATGAGGGG 58.262 43.478 0.00 0.00 0.00 4.79
3061 3705 8.461249 AAGTTAGATGATTTGGAATGATGAGG 57.539 34.615 0.00 0.00 0.00 3.86
3064 3708 7.286087 TGGGAAGTTAGATGATTTGGAATGATG 59.714 37.037 0.00 0.00 0.00 3.07
3069 3713 5.714806 GGTTGGGAAGTTAGATGATTTGGAA 59.285 40.000 0.00 0.00 0.00 3.53
3070 3714 5.261216 GGTTGGGAAGTTAGATGATTTGGA 58.739 41.667 0.00 0.00 0.00 3.53
3073 3717 4.263771 ACCGGTTGGGAAGTTAGATGATTT 60.264 41.667 0.00 0.00 40.75 2.17
3074 3718 3.265995 ACCGGTTGGGAAGTTAGATGATT 59.734 43.478 0.00 0.00 40.75 2.57
3080 3724 1.609841 GGTGACCGGTTGGGAAGTTAG 60.610 57.143 9.42 0.00 40.75 2.34
3082 3726 1.149854 GGTGACCGGTTGGGAAGTT 59.850 57.895 9.42 0.00 40.75 2.66
3084 3728 2.033602 GGGTGACCGGTTGGGAAG 59.966 66.667 9.42 0.00 43.64 3.46
3095 3739 1.757699 GTAGTGAGAGGGATGGGTGAC 59.242 57.143 0.00 0.00 0.00 3.67
3098 3742 1.062810 GGAGTAGTGAGAGGGATGGGT 60.063 57.143 0.00 0.00 0.00 4.51
3101 3745 1.686052 GCTGGAGTAGTGAGAGGGATG 59.314 57.143 0.00 0.00 0.00 3.51
3104 3748 1.045911 GGGCTGGAGTAGTGAGAGGG 61.046 65.000 0.00 0.00 0.00 4.30
3105 3749 0.324738 TGGGCTGGAGTAGTGAGAGG 60.325 60.000 0.00 0.00 0.00 3.69
3106 3750 1.480137 CTTGGGCTGGAGTAGTGAGAG 59.520 57.143 0.00 0.00 0.00 3.20
3107 3751 1.561643 CTTGGGCTGGAGTAGTGAGA 58.438 55.000 0.00 0.00 0.00 3.27
3108 3752 0.107945 GCTTGGGCTGGAGTAGTGAG 60.108 60.000 0.00 0.00 35.22 3.51
3111 3755 1.679898 GTGCTTGGGCTGGAGTAGT 59.320 57.895 0.00 0.00 39.59 2.73
3112 3756 1.448540 CGTGCTTGGGCTGGAGTAG 60.449 63.158 0.00 0.00 39.59 2.57
3116 3760 2.404566 TTAAGCGTGCTTGGGCTGGA 62.405 55.000 16.98 0.00 39.93 3.86
3117 3761 1.971167 TTAAGCGTGCTTGGGCTGG 60.971 57.895 16.98 0.00 39.93 4.85
3119 3763 0.537371 AAGTTAAGCGTGCTTGGGCT 60.537 50.000 16.98 8.98 42.33 5.19
3120 3764 0.109735 GAAGTTAAGCGTGCTTGGGC 60.110 55.000 16.98 6.99 37.47 5.36
3121 3765 0.521735 GGAAGTTAAGCGTGCTTGGG 59.478 55.000 16.98 0.00 37.47 4.12
3123 3767 0.165944 CCGGAAGTTAAGCGTGCTTG 59.834 55.000 16.98 0.00 37.47 4.01
3125 3769 1.375523 CCCGGAAGTTAAGCGTGCT 60.376 57.895 0.73 0.00 0.00 4.40
3126 3770 1.232621 AACCCGGAAGTTAAGCGTGC 61.233 55.000 0.73 0.00 0.00 5.34
3128 3772 0.683412 AGAACCCGGAAGTTAAGCGT 59.317 50.000 0.73 0.00 0.00 5.07
3129 3773 2.660189 TAGAACCCGGAAGTTAAGCG 57.340 50.000 0.73 0.00 0.00 4.68
3132 3776 4.162888 GGGAGAATAGAACCCGGAAGTTAA 59.837 45.833 0.73 0.00 34.03 2.01
3136 3780 2.116238 TGGGAGAATAGAACCCGGAAG 58.884 52.381 0.73 0.00 45.91 3.46
3137 3781 1.835531 GTGGGAGAATAGAACCCGGAA 59.164 52.381 0.73 0.00 45.91 4.30
3138 3782 1.492764 GTGGGAGAATAGAACCCGGA 58.507 55.000 0.73 0.00 45.91 5.14
3140 3784 0.529992 GCGTGGGAGAATAGAACCCG 60.530 60.000 0.00 0.00 45.91 5.28
3141 3785 0.831307 AGCGTGGGAGAATAGAACCC 59.169 55.000 0.00 0.00 43.51 4.11
3142 3786 1.202545 GGAGCGTGGGAGAATAGAACC 60.203 57.143 0.00 0.00 0.00 3.62
3143 3787 1.480954 TGGAGCGTGGGAGAATAGAAC 59.519 52.381 0.00 0.00 0.00 3.01
3144 3788 1.860641 TGGAGCGTGGGAGAATAGAA 58.139 50.000 0.00 0.00 0.00 2.10
3145 3789 1.757118 CTTGGAGCGTGGGAGAATAGA 59.243 52.381 0.00 0.00 0.00 1.98
3148 3792 0.250513 GACTTGGAGCGTGGGAGAAT 59.749 55.000 0.00 0.00 0.00 2.40
3150 3794 1.228894 AGACTTGGAGCGTGGGAGA 60.229 57.895 0.00 0.00 0.00 3.71
3151 3795 1.079543 CAGACTTGGAGCGTGGGAG 60.080 63.158 0.00 0.00 0.00 4.30
3152 3796 3.059982 CAGACTTGGAGCGTGGGA 58.940 61.111 0.00 0.00 0.00 4.37
3153 3797 2.743928 GCAGACTTGGAGCGTGGG 60.744 66.667 0.00 0.00 0.00 4.61
3154 3798 2.031012 TGCAGACTTGGAGCGTGG 59.969 61.111 0.00 0.00 0.00 4.94
3155 3799 0.882042 AAGTGCAGACTTGGAGCGTG 60.882 55.000 0.00 0.00 41.12 5.34
3156 3800 1.447643 AAGTGCAGACTTGGAGCGT 59.552 52.632 0.00 0.00 41.12 5.07
3157 3801 4.368391 AAGTGCAGACTTGGAGCG 57.632 55.556 0.00 0.00 41.12 5.03
3163 3807 3.763897 AGGAAAACAACAAGTGCAGACTT 59.236 39.130 0.00 0.00 43.63 3.01
3164 3808 3.129287 CAGGAAAACAACAAGTGCAGACT 59.871 43.478 0.00 0.00 0.00 3.24
3165 3809 3.128589 TCAGGAAAACAACAAGTGCAGAC 59.871 43.478 0.00 0.00 0.00 3.51
3168 3812 2.822561 TGTCAGGAAAACAACAAGTGCA 59.177 40.909 0.00 0.00 0.00 4.57
3169 3813 3.502191 TGTCAGGAAAACAACAAGTGC 57.498 42.857 0.00 0.00 0.00 4.40
3171 3815 9.965824 CTTATTATTGTCAGGAAAACAACAAGT 57.034 29.630 0.00 0.00 39.29 3.16
3195 3839 7.995488 CCTGAAGGTTAATAGGATTGACATCTT 59.005 37.037 0.00 0.00 31.91 2.40
3196 3840 7.348274 TCCTGAAGGTTAATAGGATTGACATCT 59.652 37.037 0.00 0.00 34.54 2.90
3199 3843 6.884472 TCCTGAAGGTTAATAGGATTGACA 57.116 37.500 0.00 0.00 34.54 3.58
3200 3844 8.753497 AATTCCTGAAGGTTAATAGGATTGAC 57.247 34.615 0.00 0.00 38.98 3.18
3201 3845 9.768215 AAAATTCCTGAAGGTTAATAGGATTGA 57.232 29.630 0.00 0.00 38.98 2.57
3202 3846 9.807649 CAAAATTCCTGAAGGTTAATAGGATTG 57.192 33.333 0.00 0.00 38.98 2.67
3206 3850 7.410120 AGCAAAATTCCTGAAGGTTAATAGG 57.590 36.000 0.00 0.00 36.34 2.57
3207 3851 8.522830 TCAAGCAAAATTCCTGAAGGTTAATAG 58.477 33.333 0.00 0.00 36.34 1.73
3208 3852 8.415950 TCAAGCAAAATTCCTGAAGGTTAATA 57.584 30.769 0.00 0.00 36.34 0.98
3211 3855 5.278957 GCTCAAGCAAAATTCCTGAAGGTTA 60.279 40.000 0.00 0.00 41.59 2.85
3212 3856 4.502087 GCTCAAGCAAAATTCCTGAAGGTT 60.502 41.667 0.00 0.00 41.59 3.50
3213 3857 3.006217 GCTCAAGCAAAATTCCTGAAGGT 59.994 43.478 0.00 0.00 41.59 3.50
3214 3858 3.582780 GCTCAAGCAAAATTCCTGAAGG 58.417 45.455 0.00 0.00 41.59 3.46
3228 3872 1.875514 TGTGTCACTTCATGCTCAAGC 59.124 47.619 4.27 0.00 42.50 4.01
3230 3874 5.518848 AAAATGTGTCACTTCATGCTCAA 57.481 34.783 4.27 0.00 0.00 3.02
3231 3875 5.764686 AGTAAAATGTGTCACTTCATGCTCA 59.235 36.000 4.27 0.00 0.00 4.26
3234 3878 5.762045 ACAGTAAAATGTGTCACTTCATGC 58.238 37.500 4.27 0.00 30.46 4.06
3235 3879 7.914871 TCAAACAGTAAAATGTGTCACTTCATG 59.085 33.333 4.27 0.00 32.52 3.07
3236 3880 7.995289 TCAAACAGTAAAATGTGTCACTTCAT 58.005 30.769 4.27 0.00 32.52 2.57
3238 3882 7.472543 ACTCAAACAGTAAAATGTGTCACTTC 58.527 34.615 4.27 0.00 31.37 3.01
3239 3883 7.391148 ACTCAAACAGTAAAATGTGTCACTT 57.609 32.000 4.27 0.00 31.37 3.16
3240 3884 7.391148 AACTCAAACAGTAAAATGTGTCACT 57.609 32.000 4.27 0.00 32.30 3.41
3241 3885 7.753132 TCAAACTCAAACAGTAAAATGTGTCAC 59.247 33.333 0.00 0.00 32.30 3.67
3245 3889 9.139174 AGTTTCAAACTCAAACAGTAAAATGTG 57.861 29.630 0.00 0.00 37.02 3.21
3253 3897 9.705290 AAAACAATAGTTTCAAACTCAAACAGT 57.295 25.926 5.92 0.00 46.79 3.55
3322 3966 6.097554 TGTGGTCAAACAATGGTCAAACTAAT 59.902 34.615 0.00 0.00 0.00 1.73
3325 3969 3.766591 TGTGGTCAAACAATGGTCAAACT 59.233 39.130 0.00 0.00 0.00 2.66
3326 3970 4.111916 CTGTGGTCAAACAATGGTCAAAC 58.888 43.478 0.00 0.00 0.00 2.93
3328 3972 3.360867 ACTGTGGTCAAACAATGGTCAA 58.639 40.909 0.00 0.00 0.00 3.18
3329 3973 3.011566 ACTGTGGTCAAACAATGGTCA 57.988 42.857 0.00 0.00 0.00 4.02
3330 3974 4.111916 CAAACTGTGGTCAAACAATGGTC 58.888 43.478 0.00 0.00 0.00 4.02
3331 3975 3.766591 TCAAACTGTGGTCAAACAATGGT 59.233 39.130 0.00 0.00 0.00 3.55
3332 3976 4.111916 GTCAAACTGTGGTCAAACAATGG 58.888 43.478 0.00 0.00 0.00 3.16
3333 3977 4.111916 GGTCAAACTGTGGTCAAACAATG 58.888 43.478 0.00 0.00 0.00 2.82
3334 3978 3.766591 TGGTCAAACTGTGGTCAAACAAT 59.233 39.130 0.00 0.00 0.00 2.71
3336 3980 2.752354 CTGGTCAAACTGTGGTCAAACA 59.248 45.455 0.00 0.00 0.00 2.83
3346 3990 4.916983 TTGGTCAAATCTGGTCAAACTG 57.083 40.909 0.00 0.00 0.00 3.16
3415 4059 9.705290 GGTCAAACAATGGTCAAACTAATTATT 57.295 29.630 0.00 0.00 0.00 1.40
3416 4060 8.865090 TGGTCAAACAATGGTCAAACTAATTAT 58.135 29.630 0.00 0.00 0.00 1.28
3417 4061 8.239038 TGGTCAAACAATGGTCAAACTAATTA 57.761 30.769 0.00 0.00 0.00 1.40
3419 4063 6.723298 TGGTCAAACAATGGTCAAACTAAT 57.277 33.333 0.00 0.00 0.00 1.73
3420 4064 6.723298 ATGGTCAAACAATGGTCAAACTAA 57.277 33.333 0.00 0.00 0.00 2.24
3421 4065 7.001674 ACTATGGTCAAACAATGGTCAAACTA 58.998 34.615 0.00 0.00 0.00 2.24
3422 4066 5.833131 ACTATGGTCAAACAATGGTCAAACT 59.167 36.000 0.00 0.00 0.00 2.66
3423 4067 6.084326 ACTATGGTCAAACAATGGTCAAAC 57.916 37.500 0.00 0.00 0.00 2.93
3432 4076 3.068873 GTGGGCAAACTATGGTCAAACAA 59.931 43.478 0.00 0.00 0.00 2.83
3433 4077 2.625790 GTGGGCAAACTATGGTCAAACA 59.374 45.455 0.00 0.00 0.00 2.83
3434 4078 2.890945 AGTGGGCAAACTATGGTCAAAC 59.109 45.455 0.00 0.00 0.00 2.93
3437 4081 1.423541 ACAGTGGGCAAACTATGGTCA 59.576 47.619 0.00 0.00 0.00 4.02
3438 4082 2.200373 ACAGTGGGCAAACTATGGTC 57.800 50.000 0.00 0.00 0.00 4.02
3440 4084 2.890311 TCAAACAGTGGGCAAACTATGG 59.110 45.455 0.00 0.00 0.00 2.74
3441 4085 4.582701 TTCAAACAGTGGGCAAACTATG 57.417 40.909 0.00 0.00 0.00 2.23
3442 4086 7.480760 AATATTCAAACAGTGGGCAAACTAT 57.519 32.000 0.00 0.00 0.00 2.12
3443 4087 6.909550 AATATTCAAACAGTGGGCAAACTA 57.090 33.333 0.00 0.00 0.00 2.24
3445 4089 6.859420 AAAATATTCAAACAGTGGGCAAAC 57.141 33.333 0.00 0.00 0.00 2.93
3447 4091 6.586344 TGAAAAATATTCAAACAGTGGGCAA 58.414 32.000 0.00 0.00 0.00 4.52
3448 4092 6.166984 TGAAAAATATTCAAACAGTGGGCA 57.833 33.333 0.00 0.00 0.00 5.36
3449 4093 7.671495 ATTGAAAAATATTCAAACAGTGGGC 57.329 32.000 7.60 0.00 41.16 5.36
3474 4118 6.879458 GGCTTGTAAGATCTAGAGTGGAAAAA 59.121 38.462 0.00 0.00 0.00 1.94
3478 4122 3.961408 GGGCTTGTAAGATCTAGAGTGGA 59.039 47.826 0.00 0.00 0.00 4.02
3479 4123 3.070302 GGGGCTTGTAAGATCTAGAGTGG 59.930 52.174 0.00 0.00 0.00 4.00
3480 4124 3.243569 CGGGGCTTGTAAGATCTAGAGTG 60.244 52.174 0.00 0.00 0.00 3.51
3482 4126 2.959707 ACGGGGCTTGTAAGATCTAGAG 59.040 50.000 0.00 0.00 0.00 2.43
3483 4127 3.028094 ACGGGGCTTGTAAGATCTAGA 57.972 47.619 0.00 0.00 0.00 2.43
3484 4128 4.341520 AGTTACGGGGCTTGTAAGATCTAG 59.658 45.833 0.00 0.00 32.79 2.43
3485 4129 4.284178 AGTTACGGGGCTTGTAAGATCTA 58.716 43.478 0.00 0.00 32.79 1.98
3487 4131 3.538634 AGTTACGGGGCTTGTAAGATC 57.461 47.619 0.00 0.00 32.79 2.75
3488 4132 3.994931 AAGTTACGGGGCTTGTAAGAT 57.005 42.857 0.00 0.00 32.79 2.40
3489 4133 3.775261 AAAGTTACGGGGCTTGTAAGA 57.225 42.857 0.00 0.00 32.79 2.10
3490 4134 4.841443 AAAAAGTTACGGGGCTTGTAAG 57.159 40.909 3.03 0.00 32.79 2.34
3518 4162 9.898152 AACATTTTCAAAATCCTCAAAAACCTA 57.102 25.926 0.00 0.00 0.00 3.08
3519 4163 8.806429 AACATTTTCAAAATCCTCAAAAACCT 57.194 26.923 0.00 0.00 0.00 3.50
3524 4168 8.821894 CCGTTAAACATTTTCAAAATCCTCAAA 58.178 29.630 0.00 0.00 0.00 2.69
3525 4169 7.439655 CCCGTTAAACATTTTCAAAATCCTCAA 59.560 33.333 0.00 0.00 0.00 3.02
3526 4170 6.926272 CCCGTTAAACATTTTCAAAATCCTCA 59.074 34.615 0.00 0.00 0.00 3.86
3527 4171 6.367695 CCCCGTTAAACATTTTCAAAATCCTC 59.632 38.462 0.00 0.00 0.00 3.71
3530 4174 7.307514 GGAACCCCGTTAAACATTTTCAAAATC 60.308 37.037 0.00 0.00 0.00 2.17
3531 4175 6.483974 GGAACCCCGTTAAACATTTTCAAAAT 59.516 34.615 0.00 0.00 0.00 1.82
3533 4177 5.358090 GGAACCCCGTTAAACATTTTCAAA 58.642 37.500 0.00 0.00 0.00 2.69
3534 4178 4.946445 GGAACCCCGTTAAACATTTTCAA 58.054 39.130 0.00 0.00 0.00 2.69
3535 4179 4.587584 GGAACCCCGTTAAACATTTTCA 57.412 40.909 0.00 0.00 0.00 2.69
3555 4199 4.876107 GTGATATGTGGTCTAGTTGTTGGG 59.124 45.833 0.00 0.00 0.00 4.12
3557 4201 6.818142 TCATGTGATATGTGGTCTAGTTGTTG 59.182 38.462 0.00 0.00 0.00 3.33
3670 8005 9.416284 ACTAAAGGTTCCATTTTCAAACTCTAA 57.584 29.630 0.00 0.00 0.00 2.10
3866 8264 2.596046 AACCGCGACCAAATGCCA 60.596 55.556 8.23 0.00 0.00 4.92
3993 8391 1.545582 TGAAAACAAGCATAGCCCTGC 59.454 47.619 0.00 0.00 42.62 4.85
4012 8410 9.862371 ATCGAGCTAACCTAAATTAGATACATG 57.138 33.333 0.83 0.00 34.59 3.21
4033 8431 8.420945 CGCTCACAAATAGAGTATAAAATCGAG 58.579 37.037 0.00 0.00 35.55 4.04
4036 8434 7.095187 CCCCGCTCACAAATAGAGTATAAAATC 60.095 40.741 0.00 0.00 35.55 2.17
4058 8456 2.998949 CCCCCTCTCTTTTCCCCG 59.001 66.667 0.00 0.00 0.00 5.73
4075 8473 1.687123 AGTACGTCCATATGGGTCTGC 59.313 52.381 21.78 9.67 38.11 4.26
4076 8474 2.956333 TCAGTACGTCCATATGGGTCTG 59.044 50.000 21.78 19.20 38.11 3.51
4093 8491 5.246656 TGCATCAATCCTTCCAAAAATCAGT 59.753 36.000 0.00 0.00 0.00 3.41
4096 8494 8.770828 CATAATGCATCAATCCTTCCAAAAATC 58.229 33.333 0.00 0.00 0.00 2.17
4171 8569 8.142994 ACACTACCGCAATTCAAATTCTATAG 57.857 34.615 0.00 0.00 0.00 1.31
4173 8571 6.597672 TGACACTACCGCAATTCAAATTCTAT 59.402 34.615 0.00 0.00 0.00 1.98
4181 8579 3.394674 TCTTGACACTACCGCAATTCA 57.605 42.857 0.00 0.00 0.00 2.57
4187 8585 0.666577 ACGCTTCTTGACACTACCGC 60.667 55.000 0.00 0.00 0.00 5.68
4223 8621 7.388437 TCATGTTATTTACGTTGTACTCCCTT 58.612 34.615 0.00 0.00 0.00 3.95
4248 8646 4.480115 TCATGTCCGGGAGTCTACATTAT 58.520 43.478 0.00 0.00 30.32 1.28
4279 8677 6.916387 CGGATCAAAGTATCGTAGTGTTGTAT 59.084 38.462 0.00 0.00 0.00 2.29
4681 9102 5.665459 ACCGAGAGCTTATATTATCATGCC 58.335 41.667 0.00 0.00 0.00 4.40
4822 9269 3.609373 CGTGTGTACAAGTACAATACCGG 59.391 47.826 14.08 0.00 46.33 5.28
4828 9275 5.659463 ACTTTACCGTGTGTACAAGTACAA 58.341 37.500 14.08 3.53 46.33 2.41
4829 9276 5.261209 ACTTTACCGTGTGTACAAGTACA 57.739 39.130 8.88 8.88 43.14 2.90
4830 9277 5.748152 TCAACTTTACCGTGTGTACAAGTAC 59.252 40.000 0.00 3.47 33.52 2.73
4831 9278 5.900425 TCAACTTTACCGTGTGTACAAGTA 58.100 37.500 0.00 0.00 33.52 2.24
4832 9279 4.757594 TCAACTTTACCGTGTGTACAAGT 58.242 39.130 0.00 0.00 34.82 3.16
4833 9280 5.917541 ATCAACTTTACCGTGTGTACAAG 57.082 39.130 0.00 0.00 0.00 3.16
4844 9291 8.501580 GGTTTGTAGTGAGTTATCAACTTTACC 58.498 37.037 0.00 0.00 43.03 2.85
4907 9354 6.479660 CACACAAGTTATCAAGGCATGTTTTT 59.520 34.615 0.00 0.00 0.00 1.94
4940 9387 9.325198 CAGCTCTGTTGTATGTAAATTACCATA 57.675 33.333 0.18 0.00 0.00 2.74
4949 9396 9.582431 GTAAGTTATCAGCTCTGTTGTATGTAA 57.418 33.333 0.00 0.00 0.00 2.41
5115 9563 8.755018 GTTTCTCAACAATTTTCATTTCATCGT 58.245 29.630 0.00 0.00 32.54 3.73
5199 9653 7.410728 GGTCAAAAAGTGATTATGATGTTTGCG 60.411 37.037 0.00 0.00 38.90 4.85
5364 9822 5.011090 TCTTCGAAACTAGATCCCATGTG 57.989 43.478 0.00 0.00 0.00 3.21
5489 9955 2.095718 GCACTAAAGGACGAAAAGCTGG 60.096 50.000 0.00 0.00 0.00 4.85
5545 10011 9.859427 TGCATTAGAATGACTAATTTTCCTTTG 57.141 29.630 6.43 0.00 45.99 2.77
5599 10065 9.646336 GATTTTAACAATACGCAAGAACGATAT 57.354 29.630 0.00 0.00 43.62 1.63
5600 10066 8.117988 GGATTTTAACAATACGCAAGAACGATA 58.882 33.333 0.00 0.00 43.62 2.92
5612 10079 6.857451 ACCAAACGTTCGGATTTTAACAATAC 59.143 34.615 13.35 0.00 0.00 1.89
5645 10112 7.225341 AGCCAATGACAAATTGAAAAAGACTTC 59.775 33.333 0.00 0.00 0.00 3.01
5689 10156 2.416547 CCATTCTTACACTTGACAGCGG 59.583 50.000 0.00 0.00 0.00 5.52
5690 10157 2.159653 GCCATTCTTACACTTGACAGCG 60.160 50.000 0.00 0.00 0.00 5.18
5712 10179 1.654954 TTGCTCTCGTACTCGCCCTC 61.655 60.000 0.00 0.00 36.96 4.30
5737 10204 1.666209 GGAATTGTCCACATGCCCCG 61.666 60.000 0.00 0.00 44.26 5.73
5798 10265 3.921767 CTGCTTCAGCTCGCCGTCA 62.922 63.158 0.00 0.00 42.66 4.35
5867 10334 1.047002 CGATGATCTTGGAGGGCTCT 58.953 55.000 0.00 0.00 0.00 4.09
5947 10414 2.480555 CGCATTCAGCCAACGGTC 59.519 61.111 0.00 0.00 41.38 4.79
5996 10463 2.847234 AAGACGGCCAGGTGGTGA 60.847 61.111 2.24 0.00 37.57 4.02
6007 10474 2.742372 CGGGCTTGTGGAAGACGG 60.742 66.667 0.00 0.00 38.24 4.79
6028 10495 4.323477 CGGGCTTGGGACGGACAA 62.323 66.667 0.00 0.00 0.00 3.18
6034 10501 1.594331 GTAATGATCGGGCTTGGGAC 58.406 55.000 0.00 0.00 0.00 4.46
6047 10520 4.100808 TCGTGGTCATGATCATGGTAATGA 59.899 41.667 30.54 22.55 46.71 2.57
6095 10628 0.824109 GATCCTGGTCGTGGTGATGA 59.176 55.000 0.00 0.00 0.00 2.92
6099 10632 1.517832 GGAGATCCTGGTCGTGGTG 59.482 63.158 0.00 0.00 0.00 4.17
6110 10643 3.453070 GACAGCAGGCGGGAGATCC 62.453 68.421 0.00 0.00 0.00 3.36
6111 10644 2.107953 GACAGCAGGCGGGAGATC 59.892 66.667 0.00 0.00 0.00 2.75
6112 10645 2.293318 TTGACAGCAGGCGGGAGAT 61.293 57.895 0.00 0.00 0.00 2.75
6125 10658 2.829206 CGTTGGCGGCTTGTTGACA 61.829 57.895 11.43 0.00 0.00 3.58
6128 10661 2.051345 GTCGTTGGCGGCTTGTTG 60.051 61.111 11.43 0.00 39.99 3.33
6129 10662 3.645975 CGTCGTTGGCGGCTTGTT 61.646 61.111 11.43 0.00 41.13 2.83
6176 10709 1.006102 GGGATGGTAGATCGGCGTG 60.006 63.158 6.85 0.00 0.00 5.34
6227 10760 2.937799 CAGGAGCATCTTCTTGAAGAGC 59.062 50.000 16.66 17.58 33.73 4.09
6247 10780 1.968493 ACGGTAGCTTCTTGAGGAACA 59.032 47.619 0.00 0.00 0.00 3.18
6263 10796 2.593956 GGCAGGAGGGAAGAACGGT 61.594 63.158 0.00 0.00 0.00 4.83
6329 10865 1.229428 TCAACCAAAAGAGCGAGCAG 58.771 50.000 0.00 0.00 0.00 4.24
6364 10900 5.694006 CCTCGCAAACATTATTTTGTGGAAA 59.306 36.000 8.77 0.00 43.95 3.13
6390 10965 4.072131 GCTCTCAACCCAACTAACAATCA 58.928 43.478 0.00 0.00 0.00 2.57
6402 11014 1.468914 GAAATGGAACGCTCTCAACCC 59.531 52.381 0.00 0.00 0.00 4.11
6467 11084 8.699749 CCAACATAGTATTACACACGATACATG 58.300 37.037 0.00 0.00 32.45 3.21
6505 11127 6.682113 GCAACGGGTCAACTAGTGAGATATAA 60.682 42.308 0.00 0.00 36.74 0.98
6506 11128 5.221185 GCAACGGGTCAACTAGTGAGATATA 60.221 44.000 0.00 0.00 36.74 0.86
6507 11129 4.441634 GCAACGGGTCAACTAGTGAGATAT 60.442 45.833 0.00 0.00 36.74 1.63
6508 11130 3.119245 GCAACGGGTCAACTAGTGAGATA 60.119 47.826 0.00 0.00 36.74 1.98
6509 11131 2.353803 GCAACGGGTCAACTAGTGAGAT 60.354 50.000 0.00 0.00 36.74 2.75
6510 11132 1.000506 GCAACGGGTCAACTAGTGAGA 59.999 52.381 0.00 0.00 36.74 3.27
6511 11133 1.429463 GCAACGGGTCAACTAGTGAG 58.571 55.000 0.00 0.00 36.74 3.51
6512 11134 0.319211 CGCAACGGGTCAACTAGTGA 60.319 55.000 0.00 0.00 0.00 3.41
6513 11135 1.897398 GCGCAACGGGTCAACTAGTG 61.897 60.000 0.30 0.00 0.00 2.74
6694 11318 7.520798 TCTCTCATCATAGTGCCCATATTTTT 58.479 34.615 0.00 0.00 0.00 1.94
6881 11517 1.236628 CTAGCATGGAATCAGCAGGC 58.763 55.000 0.00 0.00 0.00 4.85
7113 11796 8.630054 ACTTTGTGCTACCAAATTAGAATGTA 57.370 30.769 0.00 0.00 34.07 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.