Multiple sequence alignment - TraesCS4B01G223300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G223300 chr4B 100.000 5789 0 0 1 5789 467901934 467907722 0.000000e+00 10691.0
1 TraesCS4B01G223300 chr4D 89.027 5714 313 158 1 5537 380448260 380453836 0.000000e+00 6789.0
2 TraesCS4B01G223300 chr4A 91.885 3204 181 42 1792 4940 83357363 83354184 0.000000e+00 4403.0
3 TraesCS4B01G223300 chr4A 85.890 1623 113 62 1 1533 83359395 83357799 0.000000e+00 1622.0
4 TraesCS4B01G223300 chr4A 88.563 341 21 6 5210 5548 83353880 83353556 1.170000e-106 398.0
5 TraesCS4B01G223300 chr4A 94.444 252 12 2 1528 1778 83357755 83357505 2.530000e-103 387.0
6 TraesCS4B01G223300 chr6B 93.333 45 3 0 5701 5745 161498743 161498699 3.740000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G223300 chr4B 467901934 467907722 5788 False 10691.0 10691 100.0000 1 5789 1 chr4B.!!$F1 5788
1 TraesCS4B01G223300 chr4D 380448260 380453836 5576 False 6789.0 6789 89.0270 1 5537 1 chr4D.!!$F1 5536
2 TraesCS4B01G223300 chr4A 83353556 83359395 5839 True 1702.5 4403 90.1955 1 5548 4 chr4A.!!$R1 5547

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
789 911 0.039035 AACGTGCTCTCCTCTCCTCT 59.961 55.000 0.0 0.0 0.00 3.69 F
970 1096 0.397816 CCTTCCGTCCAGATCCCTCT 60.398 60.000 0.0 0.0 0.00 3.69 F
1447 1589 0.692419 AGGTCGAGGAGCATGGGATT 60.692 55.000 0.0 0.0 31.89 3.01 F
1730 1927 0.976641 TCAGTCCGTTGAAGGATGCT 59.023 50.000 0.0 0.0 43.04 3.79 F
3529 3876 1.529865 GCAAACTGTCCGTGGTAAGAC 59.470 52.381 0.0 0.0 0.00 3.01 F
4198 4584 0.034574 AGCAGTCACAACCACAACCA 60.035 50.000 0.0 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1933 2259 1.135315 AGCCTGCATGTAAATTGTGCG 60.135 47.619 0.00 0.00 41.61 5.34 R
2881 3218 1.327690 TACAGGGGTGCCGATCACTC 61.328 60.000 7.51 3.88 45.55 3.51 R
3019 3356 0.249868 TGTAGCTTTCTGCAGCACGT 60.250 50.000 9.47 0.00 45.94 4.49 R
3575 3922 0.460284 GTGCCACCAGACGGTAGATG 60.460 60.000 0.00 0.00 46.94 2.90 R
4667 5053 0.099436 GCAGCTAAGTTTCATGCGGG 59.901 55.000 0.00 0.00 0.00 6.13 R
5752 6305 0.041238 ACCTAGCCTCTAGGTGCACA 59.959 55.000 21.12 0.00 45.56 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
141 165 0.251297 AGGCAAAGCACATGCACCTA 60.251 50.000 6.64 0.00 45.60 3.08
186 234 3.649277 ATGTCGACGGAGCCTGTGC 62.649 63.158 11.62 0.00 37.95 4.57
232 286 1.798223 CAACGCCTCACTCGATGAAAA 59.202 47.619 0.00 0.00 36.69 2.29
244 298 7.243487 TCACTCGATGAAAATTGCTTTATGTC 58.757 34.615 0.00 0.00 33.02 3.06
266 331 2.744202 GGTAGTACCGTCGTCTCAAGAA 59.256 50.000 2.90 0.00 0.00 2.52
267 332 2.985406 AGTACCGTCGTCTCAAGAAC 57.015 50.000 0.00 0.00 0.00 3.01
268 333 2.224606 AGTACCGTCGTCTCAAGAACA 58.775 47.619 0.00 0.00 0.00 3.18
269 334 2.225963 AGTACCGTCGTCTCAAGAACAG 59.774 50.000 0.00 0.00 0.00 3.16
270 335 1.315690 ACCGTCGTCTCAAGAACAGA 58.684 50.000 0.00 0.00 0.00 3.41
271 336 1.679680 ACCGTCGTCTCAAGAACAGAA 59.320 47.619 0.00 0.00 0.00 3.02
272 337 2.052157 CCGTCGTCTCAAGAACAGAAC 58.948 52.381 0.00 0.00 0.00 3.01
273 338 2.052157 CGTCGTCTCAAGAACAGAACC 58.948 52.381 0.00 0.00 0.00 3.62
274 339 2.052157 GTCGTCTCAAGAACAGAACCG 58.948 52.381 0.00 0.00 0.00 4.44
275 340 1.951602 TCGTCTCAAGAACAGAACCGA 59.048 47.619 0.00 0.00 0.00 4.69
276 341 2.359848 TCGTCTCAAGAACAGAACCGAA 59.640 45.455 0.00 0.00 0.00 4.30
324 389 4.672587 TTACCGGAGAGAATCATCAAGG 57.327 45.455 9.46 0.00 37.82 3.61
366 459 1.458445 GCACTCGAAGTAAAACGACCC 59.542 52.381 0.00 0.00 34.82 4.46
465 564 3.916989 ACAGAGTTTAAACCATCCCTCCT 59.083 43.478 14.72 0.00 0.00 3.69
484 583 1.221466 TGGAGAGTTTCTGCGTTGCG 61.221 55.000 0.00 0.00 37.69 4.85
530 629 2.781681 AAGGGGAATGAAGTACGGTG 57.218 50.000 0.00 0.00 0.00 4.94
544 643 5.808042 AGTACGGTGGCATATACTATACG 57.192 43.478 6.51 0.00 0.00 3.06
548 647 4.763793 ACGGTGGCATATACTATACGAGTT 59.236 41.667 0.00 0.00 39.81 3.01
550 649 6.430925 ACGGTGGCATATACTATACGAGTTTA 59.569 38.462 0.00 0.00 39.81 2.01
551 650 7.121759 ACGGTGGCATATACTATACGAGTTTAT 59.878 37.037 0.00 0.00 39.81 1.40
594 705 4.324402 GCGTTGAAAATTCCTGCTTATGTG 59.676 41.667 0.00 0.00 0.00 3.21
653 764 3.239627 AAGGGAGCGAGACAGGGGA 62.240 63.158 0.00 0.00 0.00 4.81
654 765 3.462678 GGGAGCGAGACAGGGGAC 61.463 72.222 0.00 0.00 0.00 4.46
655 766 3.827898 GGAGCGAGACAGGGGACG 61.828 72.222 0.00 0.00 0.00 4.79
697 809 3.706594 GTCCATCCACTCAATAGACCTGA 59.293 47.826 0.00 0.00 0.00 3.86
789 911 0.039035 AACGTGCTCTCCTCTCCTCT 59.961 55.000 0.00 0.00 0.00 3.69
794 916 0.535102 GCTCTCCTCTCCTCTCCTCG 60.535 65.000 0.00 0.00 0.00 4.63
795 917 0.535102 CTCTCCTCTCCTCTCCTCGC 60.535 65.000 0.00 0.00 0.00 5.03
796 918 1.528309 CTCCTCTCCTCTCCTCGCC 60.528 68.421 0.00 0.00 0.00 5.54
797 919 1.994885 CTCCTCTCCTCTCCTCGCCT 61.995 65.000 0.00 0.00 0.00 5.52
798 920 1.528309 CCTCTCCTCTCCTCGCCTC 60.528 68.421 0.00 0.00 0.00 4.70
799 921 1.528309 CTCTCCTCTCCTCGCCTCC 60.528 68.421 0.00 0.00 0.00 4.30
800 922 2.520741 CTCCTCTCCTCGCCTCCC 60.521 72.222 0.00 0.00 0.00 4.30
812 934 4.150454 CCTCCCCTCCGGCTCTCT 62.150 72.222 0.00 0.00 0.00 3.10
822 944 3.024217 GGCTCTCTCTCCCCCTCT 58.976 66.667 0.00 0.00 0.00 3.69
897 1019 3.869481 CTCCCTAGAGGCAGGAGC 58.131 66.667 0.00 0.00 40.75 4.70
970 1096 0.397816 CCTTCCGTCCAGATCCCTCT 60.398 60.000 0.00 0.00 0.00 3.69
973 1099 0.752009 TCCGTCCAGATCCCTCTTCG 60.752 60.000 0.00 0.00 0.00 3.79
1118 1250 3.081409 TAAGCAGTCGCCTCCCCC 61.081 66.667 0.00 0.00 39.83 5.40
1179 1311 4.820716 CCAAATTTGTCATTTTGGGCTTGA 59.179 37.500 16.73 0.00 45.27 3.02
1223 1356 1.888512 TGGGCATGCACTTTTCTTCTC 59.111 47.619 22.81 0.00 0.00 2.87
1296 1430 3.556365 GGCTCGGAGTACTATTTTGCTTC 59.444 47.826 6.90 0.00 0.00 3.86
1297 1431 4.434520 GCTCGGAGTACTATTTTGCTTCT 58.565 43.478 6.90 0.00 0.00 2.85
1298 1432 4.870991 GCTCGGAGTACTATTTTGCTTCTT 59.129 41.667 6.90 0.00 0.00 2.52
1351 1489 0.796312 CCTGTCGATTTGTCAACCCG 59.204 55.000 0.00 0.00 0.00 5.28
1397 1535 4.093703 CCGGACGCATTCACAAGTTTATAA 59.906 41.667 0.00 0.00 0.00 0.98
1398 1536 5.220777 CCGGACGCATTCACAAGTTTATAAT 60.221 40.000 0.00 0.00 0.00 1.28
1399 1537 6.018588 CCGGACGCATTCACAAGTTTATAATA 60.019 38.462 0.00 0.00 0.00 0.98
1400 1538 7.307751 CCGGACGCATTCACAAGTTTATAATAT 60.308 37.037 0.00 0.00 0.00 1.28
1401 1539 8.067784 CGGACGCATTCACAAGTTTATAATATT 58.932 33.333 0.00 0.00 0.00 1.28
1427 1569 7.822161 ATTATGCTACATGTTTATTGCCTCA 57.178 32.000 2.30 0.00 0.00 3.86
1447 1589 0.692419 AGGTCGAGGAGCATGGGATT 60.692 55.000 0.00 0.00 31.89 3.01
1487 1629 4.733523 GCACAACGGTCAAATGTTCTCTTT 60.734 41.667 0.00 0.00 0.00 2.52
1493 1635 5.147162 CGGTCAAATGTTCTCTTTGCTTAC 58.853 41.667 0.00 0.00 34.36 2.34
1494 1636 5.277779 CGGTCAAATGTTCTCTTTGCTTACA 60.278 40.000 0.00 0.00 34.36 2.41
1497 1639 7.327032 GGTCAAATGTTCTCTTTGCTTACATTC 59.673 37.037 0.00 0.00 38.19 2.67
1536 1682 8.816640 TTCTTTTTGAATATTCTTGTCTTGGC 57.183 30.769 16.24 0.00 0.00 4.52
1537 1683 7.950512 TCTTTTTGAATATTCTTGTCTTGGCA 58.049 30.769 16.24 0.00 0.00 4.92
1538 1684 7.867403 TCTTTTTGAATATTCTTGTCTTGGCAC 59.133 33.333 16.24 0.00 0.00 5.01
1552 1747 6.276847 TGTCTTGGCACGTTGATTTAATTTT 58.723 32.000 0.00 0.00 0.00 1.82
1554 1749 6.419413 GTCTTGGCACGTTGATTTAATTTTGA 59.581 34.615 0.00 0.00 0.00 2.69
1556 1751 7.655328 TCTTGGCACGTTGATTTAATTTTGATT 59.345 29.630 0.00 0.00 0.00 2.57
1618 1813 8.439286 GTTTTGAAACAAGCTCACAAATGTAAA 58.561 29.630 1.90 0.00 38.74 2.01
1630 1825 4.213059 CACAAATGTAAACCAACATTGCCC 59.787 41.667 3.19 0.00 46.72 5.36
1692 1887 4.667262 CCATGTTTGTTCGTGTTCTTTCA 58.333 39.130 0.00 0.00 0.00 2.69
1693 1888 4.734854 CCATGTTTGTTCGTGTTCTTTCAG 59.265 41.667 0.00 0.00 0.00 3.02
1718 1915 1.128692 GTGCCTCGAAAAATCAGTCCG 59.871 52.381 0.00 0.00 0.00 4.79
1730 1927 0.976641 TCAGTCCGTTGAAGGATGCT 59.023 50.000 0.00 0.00 43.04 3.79
1771 1968 6.071221 AGTGCATCTTCAAAATGGCTAATTGA 60.071 34.615 0.00 0.00 0.00 2.57
1867 2192 9.840427 CACGTGGAAAAGAACTTGATAATAAAT 57.160 29.630 7.95 0.00 0.00 1.40
1894 2219 7.899178 TGGATATTATGTTTATAGCGTGTGG 57.101 36.000 0.00 0.00 0.00 4.17
1906 2231 8.823818 GTTTATAGCGTGTGGTAGTCAATAAAT 58.176 33.333 0.00 0.00 0.00 1.40
1933 2259 6.654793 TGCATTTTAGTTTTGGTGTTTGAC 57.345 33.333 0.00 0.00 0.00 3.18
1948 2274 3.733224 TGTTTGACGCACAATTTACATGC 59.267 39.130 0.00 0.00 38.36 4.06
1960 2286 4.622260 ATTTACATGCAGGCTGGTTTTT 57.378 36.364 17.64 0.00 0.00 1.94
2079 2408 6.651225 GGTGGCTCCTTCAGTTATATGATTAC 59.349 42.308 0.00 0.00 0.00 1.89
2346 2675 2.159085 CCCAGGACAAAGGTACTCGATC 60.159 54.545 0.00 0.00 35.42 3.69
2748 3085 6.426646 AATCTCCTTTATGATTCGCTAGGT 57.573 37.500 0.00 0.00 0.00 3.08
2756 3093 3.802948 TGATTCGCTAGGTCTTTCTCC 57.197 47.619 0.00 0.00 0.00 3.71
2772 3109 4.900635 TTCTCCTTTTCTCTTTGCACAC 57.099 40.909 0.00 0.00 0.00 3.82
2846 3183 6.682423 TCCAGCTAACATTTGTGATGTATG 57.318 37.500 0.00 0.00 0.00 2.39
2881 3218 3.547868 CGTGATAATAATCCGATGGCTCG 59.452 47.826 0.00 0.28 44.62 5.03
2945 3282 9.606631 ACACTTAATATGAGTCTCTTTTGGATC 57.393 33.333 0.65 0.00 0.00 3.36
3016 3353 7.877612 TGAGTCTAAACAATTGCTGTGATCTAA 59.122 33.333 5.05 0.00 38.67 2.10
3118 3456 7.946655 TTGTATATGTTGCTAGCATCTGTAC 57.053 36.000 20.13 18.98 0.00 2.90
3288 3626 4.728772 TCATTTGGATCCTGAAGTGTTGT 58.271 39.130 14.23 0.00 0.00 3.32
3312 3650 7.042992 TGTGTAATTTTGTTATCGCGATCTAGG 60.043 37.037 27.45 0.00 0.00 3.02
3330 3676 2.921221 AGGAAAGGACCAGGAGAATCA 58.079 47.619 0.00 0.00 36.25 2.57
3351 3697 6.952773 TCACAAGTGGCAGTATTTTACTTT 57.047 33.333 0.00 0.00 36.76 2.66
3353 3699 8.453238 TCACAAGTGGCAGTATTTTACTTTAA 57.547 30.769 0.00 0.00 36.76 1.52
3354 3700 8.347035 TCACAAGTGGCAGTATTTTACTTTAAC 58.653 33.333 0.00 0.00 36.76 2.01
3355 3701 8.132362 CACAAGTGGCAGTATTTTACTTTAACA 58.868 33.333 0.00 0.00 36.76 2.41
3356 3702 8.688151 ACAAGTGGCAGTATTTTACTTTAACAA 58.312 29.630 0.00 0.00 36.76 2.83
3357 3703 9.691362 CAAGTGGCAGTATTTTACTTTAACAAT 57.309 29.630 0.00 0.00 36.76 2.71
3447 3793 8.517878 ACCAGTTATTGAATTCTTCTTGTCATG 58.482 33.333 7.05 0.00 0.00 3.07
3484 3831 6.494666 TTCCTCGGGAATATATTCAGTTGT 57.505 37.500 23.54 0.00 36.71 3.32
3519 3866 7.547227 AGGATTTTACATAATGCAAACTGTCC 58.453 34.615 0.00 0.00 0.00 4.02
3529 3876 1.529865 GCAAACTGTCCGTGGTAAGAC 59.470 52.381 0.00 0.00 0.00 3.01
3583 3930 6.668541 AGATTCACAATTTCACATCTACCG 57.331 37.500 0.00 0.00 0.00 4.02
3611 3958 3.308438 GCACTTGCCTGAAACATGATT 57.692 42.857 0.00 0.00 34.31 2.57
3612 3959 4.439305 GCACTTGCCTGAAACATGATTA 57.561 40.909 0.00 0.00 34.31 1.75
3613 3960 4.168760 GCACTTGCCTGAAACATGATTAC 58.831 43.478 0.00 0.00 34.31 1.89
3614 3961 4.321156 GCACTTGCCTGAAACATGATTACA 60.321 41.667 0.00 0.00 34.31 2.41
3615 3962 5.622914 GCACTTGCCTGAAACATGATTACAT 60.623 40.000 0.00 0.00 34.22 2.29
3616 3963 6.032094 CACTTGCCTGAAACATGATTACATC 58.968 40.000 0.00 0.00 34.15 3.06
3617 3964 5.948162 ACTTGCCTGAAACATGATTACATCT 59.052 36.000 0.00 0.00 34.15 2.90
3620 3969 7.936496 TGCCTGAAACATGATTACATCTTAA 57.064 32.000 0.00 0.00 34.15 1.85
3622 3971 7.828717 TGCCTGAAACATGATTACATCTTAAGA 59.171 33.333 7.82 7.82 34.15 2.10
3645 3994 9.860898 AAGATTCATTTGGAACTGCTATAAAAC 57.139 29.630 0.00 0.00 38.60 2.43
3646 3995 9.023962 AGATTCATTTGGAACTGCTATAAAACA 57.976 29.630 0.00 0.00 38.60 2.83
3647 3996 9.807649 GATTCATTTGGAACTGCTATAAAACAT 57.192 29.630 0.00 0.00 38.60 2.71
3648 3997 8.984891 TTCATTTGGAACTGCTATAAAACATG 57.015 30.769 0.00 0.00 0.00 3.21
3650 3999 8.970020 TCATTTGGAACTGCTATAAAACATGAT 58.030 29.630 0.00 0.00 0.00 2.45
3651 4000 9.590451 CATTTGGAACTGCTATAAAACATGATT 57.410 29.630 0.00 0.00 0.00 2.57
3654 4003 8.800370 TGGAACTGCTATAAAACATGATTACA 57.200 30.769 0.00 0.00 0.00 2.41
3709 4067 8.427276 TGTTCTCTAGCATTTCATCTCATATGT 58.573 33.333 1.90 0.00 0.00 2.29
3725 4083 8.547967 TCTCATATGTCCTGTAACAAAGAAAC 57.452 34.615 1.90 0.00 31.81 2.78
3728 4086 8.729756 TCATATGTCCTGTAACAAAGAAACATG 58.270 33.333 1.90 0.00 31.81 3.21
3731 4089 3.572255 TCCTGTAACAAAGAAACATGCCC 59.428 43.478 0.00 0.00 0.00 5.36
3752 4110 5.623264 GCCCGTTTGCAAATTGATTAAAAAC 59.377 36.000 16.21 0.00 0.00 2.43
3759 4118 9.483062 TTTGCAAATTGATTAAAAACTGAAACG 57.517 25.926 8.05 0.00 0.00 3.60
3766 4125 5.766174 TGATTAAAAACTGAAACGGGTAGCT 59.234 36.000 0.00 0.00 0.00 3.32
3770 4129 6.644248 AAAAACTGAAACGGGTAGCTAAAT 57.356 33.333 0.00 0.00 0.00 1.40
3792 4151 3.243724 ACCCTGATATCTAGAAGTGGCC 58.756 50.000 3.98 0.00 0.00 5.36
3796 4155 4.288105 CCTGATATCTAGAAGTGGCCCATT 59.712 45.833 0.00 0.00 0.00 3.16
3805 4164 4.098894 AGAAGTGGCCCATTCAAATCATT 58.901 39.130 16.83 0.00 0.00 2.57
3849 4208 4.373348 ACCTTAGTAAGCGCTGAAGTAG 57.627 45.455 12.58 6.40 0.00 2.57
3850 4209 3.762823 ACCTTAGTAAGCGCTGAAGTAGT 59.237 43.478 12.58 4.89 0.00 2.73
3852 4211 5.416952 ACCTTAGTAAGCGCTGAAGTAGTAA 59.583 40.000 12.58 11.96 0.00 2.24
3855 4214 4.984205 AGTAAGCGCTGAAGTAGTAACTC 58.016 43.478 12.58 0.00 33.75 3.01
3856 4215 3.936372 AAGCGCTGAAGTAGTAACTCA 57.064 42.857 12.58 0.00 33.75 3.41
3858 4217 4.457834 AGCGCTGAAGTAGTAACTCAAT 57.542 40.909 10.39 0.00 33.75 2.57
3859 4218 4.425520 AGCGCTGAAGTAGTAACTCAATC 58.574 43.478 10.39 0.00 33.75 2.67
3860 4219 3.552294 GCGCTGAAGTAGTAACTCAATCC 59.448 47.826 0.00 0.00 33.75 3.01
3861 4220 4.678309 GCGCTGAAGTAGTAACTCAATCCT 60.678 45.833 0.00 0.00 33.75 3.24
3862 4221 5.038033 CGCTGAAGTAGTAACTCAATCCTC 58.962 45.833 0.00 0.00 33.75 3.71
3863 4222 5.163602 CGCTGAAGTAGTAACTCAATCCTCT 60.164 44.000 0.00 0.00 33.75 3.69
3864 4223 6.038382 CGCTGAAGTAGTAACTCAATCCTCTA 59.962 42.308 0.00 0.00 33.75 2.43
3865 4224 7.255312 CGCTGAAGTAGTAACTCAATCCTCTAT 60.255 40.741 0.00 0.00 33.75 1.98
3923 4294 0.247736 AGTCGCACCATCTGGAGTTC 59.752 55.000 2.55 0.00 38.94 3.01
3980 4351 7.994425 TGCATAAGAAATGAAGGTTTCTACA 57.006 32.000 2.67 0.00 45.18 2.74
3981 4352 8.402798 TGCATAAGAAATGAAGGTTTCTACAA 57.597 30.769 2.67 0.00 45.18 2.41
4019 4390 7.125792 TGGTTTTAAATAAACTTGGGCTGAA 57.874 32.000 0.00 0.00 0.00 3.02
4100 4471 9.778741 TTAACTAATTCTCAAGAGTCAACATGT 57.221 29.630 0.00 0.00 0.00 3.21
4112 4483 6.715280 AGAGTCAACATGTTATCCATCTGTT 58.285 36.000 11.53 0.00 0.00 3.16
4198 4584 0.034574 AGCAGTCACAACCACAACCA 60.035 50.000 0.00 0.00 0.00 3.67
4204 4590 1.560146 TCACAACCACAACCACAGGTA 59.440 47.619 0.00 0.00 33.12 3.08
4261 4647 2.704464 TGCACAGAGCTGCATCTATT 57.296 45.000 1.02 0.00 42.36 1.73
4310 4696 1.130054 AGCTCAAGAGACCAAGCCCA 61.130 55.000 0.32 0.00 35.32 5.36
4322 4708 0.545071 CAAGCCCATTTCCCCCAAGT 60.545 55.000 0.00 0.00 0.00 3.16
4364 4750 4.408821 GTGGTCCAGCGGCATCCA 62.409 66.667 1.45 2.04 0.00 3.41
4365 4751 4.408821 TGGTCCAGCGGCATCCAC 62.409 66.667 1.45 0.00 0.00 4.02
4372 4758 3.810896 GCGGCATCCACGAAACCC 61.811 66.667 0.00 0.00 0.00 4.11
4432 4818 3.561725 AGACAAAGAAAAGTGAGGCGAAG 59.438 43.478 0.00 0.00 0.00 3.79
4582 4968 2.035442 GGGCGCAGAAGAGGTTGAC 61.035 63.158 10.83 0.00 0.00 3.18
4679 5065 3.645268 GAGGGCCCCGCATGAAACT 62.645 63.158 21.43 0.00 0.00 2.66
4689 5075 2.512885 CGCATGAAACTTAGCTGCAAG 58.487 47.619 1.02 6.36 33.13 4.01
4725 5111 0.038892 GCATGGTGTTGTTGCTCCTG 60.039 55.000 0.00 0.00 33.61 3.86
4757 5144 8.908903 TGAGTTTTATTAGGTTGTCATGTTGTT 58.091 29.630 0.00 0.00 0.00 2.83
4782 5169 4.363999 GTGGAGAGAATATCTGTTGGTCG 58.636 47.826 0.00 0.00 38.84 4.79
4810 5197 5.623956 TTGGTCCTTCTGTTTCAGAGTTA 57.376 39.130 0.00 0.00 41.75 2.24
4811 5198 5.825593 TGGTCCTTCTGTTTCAGAGTTAT 57.174 39.130 0.00 0.00 41.75 1.89
4999 5461 2.807967 GCAATCGGCTACTGCATAATCA 59.192 45.455 0.00 0.00 41.91 2.57
5016 5478 8.579006 TGCATAATCAACATTCTTCTTGTTTCT 58.421 29.630 0.00 0.00 35.18 2.52
5055 5560 6.381133 AGAACTTCTTGTTGGAAAAGGATGTT 59.619 34.615 0.00 0.00 39.30 2.71
5057 5562 5.422012 ACTTCTTGTTGGAAAAGGATGTTGT 59.578 36.000 0.00 0.00 0.00 3.32
5068 5573 3.928727 AGGATGTTGTGCATGTTCTTG 57.071 42.857 0.00 0.00 38.06 3.02
5105 5613 9.343539 GAAATGGCTACTCAAAAAGGATATAGT 57.656 33.333 0.00 0.00 0.00 2.12
5106 5614 8.682936 AATGGCTACTCAAAAAGGATATAGTG 57.317 34.615 0.00 0.00 0.00 2.74
5107 5615 7.195374 TGGCTACTCAAAAAGGATATAGTGT 57.805 36.000 0.00 0.00 0.00 3.55
5108 5616 8.313944 TGGCTACTCAAAAAGGATATAGTGTA 57.686 34.615 0.00 0.00 0.00 2.90
5109 5617 8.421784 TGGCTACTCAAAAAGGATATAGTGTAG 58.578 37.037 0.00 0.00 0.00 2.74
5110 5618 8.422566 GGCTACTCAAAAAGGATATAGTGTAGT 58.577 37.037 0.00 0.00 0.00 2.73
5111 5619 9.819267 GCTACTCAAAAAGGATATAGTGTAGTT 57.181 33.333 0.00 0.00 0.00 2.24
5119 5627 8.438676 AAAGGATATAGTGTAGTTGATTGTGC 57.561 34.615 0.00 0.00 0.00 4.57
5120 5628 7.366847 AGGATATAGTGTAGTTGATTGTGCT 57.633 36.000 0.00 0.00 0.00 4.40
5121 5629 7.212976 AGGATATAGTGTAGTTGATTGTGCTG 58.787 38.462 0.00 0.00 0.00 4.41
5122 5630 6.986817 GGATATAGTGTAGTTGATTGTGCTGT 59.013 38.462 0.00 0.00 0.00 4.40
5123 5631 8.141909 GGATATAGTGTAGTTGATTGTGCTGTA 58.858 37.037 0.00 0.00 0.00 2.74
5124 5632 8.873215 ATATAGTGTAGTTGATTGTGCTGTAC 57.127 34.615 0.00 0.00 0.00 2.90
5125 5633 4.956085 AGTGTAGTTGATTGTGCTGTACA 58.044 39.130 0.00 0.00 37.56 2.90
5153 5692 6.152661 TGTCAAGAAAATAGGTATGCCCAAAG 59.847 38.462 0.00 0.00 34.66 2.77
5154 5693 6.152831 GTCAAGAAAATAGGTATGCCCAAAGT 59.847 38.462 0.00 0.00 34.66 2.66
5250 5790 7.492352 AGTAAAGTTTAGTGTTAGCCAACAG 57.508 36.000 0.00 0.00 45.18 3.16
5325 5876 0.587768 TGCTTCACAATGCTGACACG 59.412 50.000 0.00 0.00 0.00 4.49
5326 5877 0.588252 GCTTCACAATGCTGACACGT 59.412 50.000 0.00 0.00 0.00 4.49
5327 5878 1.661178 GCTTCACAATGCTGACACGTG 60.661 52.381 15.48 15.48 35.04 4.49
5328 5879 1.599071 CTTCACAATGCTGACACGTGT 59.401 47.619 23.64 23.64 35.20 4.49
5329 5880 0.936600 TCACAATGCTGACACGTGTG 59.063 50.000 28.82 14.17 42.52 3.82
5397 5949 3.058639 GGAGAGCTTTAGCAACACACTTG 60.059 47.826 4.33 0.00 45.16 3.16
5398 5950 2.880890 AGAGCTTTAGCAACACACTTGG 59.119 45.455 4.33 0.00 45.16 3.61
5440 5992 4.162131 TGAAAGCACAGATGATGCCTACTA 59.838 41.667 0.00 0.00 44.53 1.82
5456 6009 4.082679 GCCTACTACCCTAGTGATTGATCG 60.083 50.000 0.00 0.00 39.81 3.69
5500 6053 9.213799 AGATACACTGATCTTTGTTTCTTCTTC 57.786 33.333 11.67 0.00 32.17 2.87
5532 6085 2.423538 GGGGAGTTCCATTGATGTTTCG 59.576 50.000 0.00 0.00 37.91 3.46
5545 6098 1.872388 TGTTTCGCGAAGACATGGAA 58.128 45.000 22.21 1.04 0.00 3.53
5548 6101 1.710013 TTCGCGAAGACATGGAACTC 58.290 50.000 19.38 0.00 0.00 3.01
5549 6102 0.601057 TCGCGAAGACATGGAACTCA 59.399 50.000 6.20 0.00 0.00 3.41
5550 6103 1.204704 TCGCGAAGACATGGAACTCAT 59.795 47.619 6.20 0.00 36.31 2.90
5551 6104 2.425668 TCGCGAAGACATGGAACTCATA 59.574 45.455 6.20 0.00 34.12 2.15
5552 6105 3.068165 TCGCGAAGACATGGAACTCATAT 59.932 43.478 6.20 0.00 34.12 1.78
5553 6106 4.277423 TCGCGAAGACATGGAACTCATATA 59.723 41.667 6.20 0.00 34.12 0.86
5554 6107 4.982295 CGCGAAGACATGGAACTCATATAA 59.018 41.667 0.00 0.00 34.12 0.98
5555 6108 5.462068 CGCGAAGACATGGAACTCATATAAA 59.538 40.000 0.00 0.00 34.12 1.40
5556 6109 6.562270 CGCGAAGACATGGAACTCATATAAAC 60.562 42.308 0.00 0.00 34.12 2.01
5557 6110 6.257849 GCGAAGACATGGAACTCATATAAACA 59.742 38.462 0.00 0.00 34.12 2.83
5558 6111 7.517417 GCGAAGACATGGAACTCATATAAACAG 60.517 40.741 0.00 0.00 34.12 3.16
5559 6112 7.517417 CGAAGACATGGAACTCATATAAACAGC 60.517 40.741 0.00 0.00 34.12 4.40
5560 6113 6.653020 AGACATGGAACTCATATAAACAGCA 58.347 36.000 0.00 0.00 34.12 4.41
5561 6114 7.112122 AGACATGGAACTCATATAAACAGCAA 58.888 34.615 0.00 0.00 34.12 3.91
5562 6115 7.611467 AGACATGGAACTCATATAAACAGCAAA 59.389 33.333 0.00 0.00 34.12 3.68
5563 6116 8.121305 ACATGGAACTCATATAAACAGCAAAA 57.879 30.769 0.00 0.00 34.12 2.44
5564 6117 8.028938 ACATGGAACTCATATAAACAGCAAAAC 58.971 33.333 0.00 0.00 34.12 2.43
5565 6118 7.759489 TGGAACTCATATAAACAGCAAAACT 57.241 32.000 0.00 0.00 0.00 2.66
5566 6119 8.177119 TGGAACTCATATAAACAGCAAAACTT 57.823 30.769 0.00 0.00 0.00 2.66
5567 6120 8.081633 TGGAACTCATATAAACAGCAAAACTTG 58.918 33.333 0.00 0.00 0.00 3.16
5580 6133 2.979813 CAAAACTTGCTGCGTGTAATCC 59.020 45.455 0.00 0.00 0.00 3.01
5581 6134 1.890876 AACTTGCTGCGTGTAATCCA 58.109 45.000 0.00 0.00 0.00 3.41
5582 6135 2.113860 ACTTGCTGCGTGTAATCCAT 57.886 45.000 0.00 0.00 0.00 3.41
5583 6136 2.436417 ACTTGCTGCGTGTAATCCATT 58.564 42.857 0.00 0.00 0.00 3.16
5584 6137 2.420022 ACTTGCTGCGTGTAATCCATTC 59.580 45.455 0.00 0.00 0.00 2.67
5585 6138 2.106477 TGCTGCGTGTAATCCATTCA 57.894 45.000 0.00 0.00 0.00 2.57
5586 6139 2.431454 TGCTGCGTGTAATCCATTCAA 58.569 42.857 0.00 0.00 0.00 2.69
5587 6140 2.816672 TGCTGCGTGTAATCCATTCAAA 59.183 40.909 0.00 0.00 0.00 2.69
5588 6141 3.119884 TGCTGCGTGTAATCCATTCAAAG 60.120 43.478 0.00 0.00 0.00 2.77
5589 6142 3.119849 GCTGCGTGTAATCCATTCAAAGT 60.120 43.478 0.00 0.00 0.00 2.66
5590 6143 4.615912 GCTGCGTGTAATCCATTCAAAGTT 60.616 41.667 0.00 0.00 0.00 2.66
5591 6144 4.793071 TGCGTGTAATCCATTCAAAGTTG 58.207 39.130 0.00 0.00 0.00 3.16
5592 6145 4.517075 TGCGTGTAATCCATTCAAAGTTGA 59.483 37.500 0.00 0.00 34.92 3.18
5605 6158 6.497785 TTCAAAGTTGAACTAAAACCACGA 57.502 33.333 0.00 0.00 41.88 4.35
5606 6159 5.871539 TCAAAGTTGAACTAAAACCACGAC 58.128 37.500 0.00 0.00 33.55 4.34
5607 6160 5.411977 TCAAAGTTGAACTAAAACCACGACA 59.588 36.000 0.00 0.00 33.55 4.35
5608 6161 4.870221 AGTTGAACTAAAACCACGACAC 57.130 40.909 0.00 0.00 0.00 3.67
5609 6162 3.624410 AGTTGAACTAAAACCACGACACC 59.376 43.478 0.00 0.00 0.00 4.16
5610 6163 2.203401 TGAACTAAAACCACGACACCG 58.797 47.619 0.00 0.00 42.50 4.94
5611 6164 2.159128 TGAACTAAAACCACGACACCGA 60.159 45.455 0.00 0.00 39.50 4.69
5612 6165 2.600470 ACTAAAACCACGACACCGAA 57.400 45.000 0.00 0.00 39.50 4.30
5613 6166 2.903798 ACTAAAACCACGACACCGAAA 58.096 42.857 0.00 0.00 39.50 3.46
5614 6167 2.609002 ACTAAAACCACGACACCGAAAC 59.391 45.455 0.00 0.00 39.50 2.78
5615 6168 1.451067 AAAACCACGACACCGAAACA 58.549 45.000 0.00 0.00 39.50 2.83
5616 6169 1.011333 AAACCACGACACCGAAACAG 58.989 50.000 0.00 0.00 39.50 3.16
5617 6170 0.176219 AACCACGACACCGAAACAGA 59.824 50.000 0.00 0.00 39.50 3.41
5618 6171 0.249322 ACCACGACACCGAAACAGAG 60.249 55.000 0.00 0.00 39.50 3.35
5619 6172 0.944311 CCACGACACCGAAACAGAGG 60.944 60.000 0.00 0.00 39.50 3.69
5620 6173 0.944311 CACGACACCGAAACAGAGGG 60.944 60.000 0.00 0.00 39.50 4.30
5621 6174 1.111116 ACGACACCGAAACAGAGGGA 61.111 55.000 0.00 0.00 39.50 4.20
5622 6175 0.666577 CGACACCGAAACAGAGGGAC 60.667 60.000 0.00 0.00 38.22 4.46
5623 6176 3.026288 CGACACCGAAACAGAGGGACT 62.026 57.143 0.00 0.00 39.31 3.85
5624 6177 1.891150 GACACCGAAACAGAGGGACTA 59.109 52.381 0.00 0.00 41.55 2.59
5625 6178 1.617357 ACACCGAAACAGAGGGACTAC 59.383 52.381 0.00 0.00 41.55 2.73
5626 6179 1.067071 CACCGAAACAGAGGGACTACC 60.067 57.143 0.00 0.00 41.55 3.18
5643 6196 2.387952 CCTAGGGAGGTTGGTTGCT 58.612 57.895 0.00 0.00 38.16 3.91
5644 6197 0.698818 CCTAGGGAGGTTGGTTGCTT 59.301 55.000 0.00 0.00 38.16 3.91
5645 6198 1.075536 CCTAGGGAGGTTGGTTGCTTT 59.924 52.381 0.00 0.00 38.16 3.51
5646 6199 2.307686 CCTAGGGAGGTTGGTTGCTTTA 59.692 50.000 0.00 0.00 38.16 1.85
5647 6200 3.245122 CCTAGGGAGGTTGGTTGCTTTAA 60.245 47.826 0.00 0.00 38.16 1.52
5648 6201 2.594131 AGGGAGGTTGGTTGCTTTAAC 58.406 47.619 0.00 0.00 38.60 2.01
5649 6202 2.091555 AGGGAGGTTGGTTGCTTTAACA 60.092 45.455 0.00 0.00 41.18 2.41
5650 6203 2.696187 GGGAGGTTGGTTGCTTTAACAA 59.304 45.455 0.00 0.00 41.18 2.83
5651 6204 3.243737 GGGAGGTTGGTTGCTTTAACAAG 60.244 47.826 0.00 0.00 41.18 3.16
5652 6205 3.243737 GGAGGTTGGTTGCTTTAACAAGG 60.244 47.826 0.00 0.00 41.18 3.61
5653 6206 3.634910 GAGGTTGGTTGCTTTAACAAGGA 59.365 43.478 0.00 0.00 41.18 3.36
5654 6207 4.027437 AGGTTGGTTGCTTTAACAAGGAA 58.973 39.130 0.00 0.00 41.18 3.36
5655 6208 4.468153 AGGTTGGTTGCTTTAACAAGGAAA 59.532 37.500 0.00 0.00 41.56 3.13
5656 6209 4.569162 GGTTGGTTGCTTTAACAAGGAAAC 59.431 41.667 0.00 0.00 45.85 2.78
5658 6211 4.036567 GGTTGCTTTAACAAGGAAACGT 57.963 40.909 0.00 0.00 41.56 3.99
5659 6212 4.426416 GGTTGCTTTAACAAGGAAACGTT 58.574 39.130 0.00 0.00 41.56 3.99
5660 6213 4.266739 GGTTGCTTTAACAAGGAAACGTTG 59.733 41.667 0.00 0.00 41.56 4.10
5661 6214 4.705337 TGCTTTAACAAGGAAACGTTGT 57.295 36.364 0.00 0.00 39.89 3.32
5663 6216 5.096849 TGCTTTAACAAGGAAACGTTGTTC 58.903 37.500 20.22 0.00 43.12 3.18
5664 6217 5.106078 TGCTTTAACAAGGAAACGTTGTTCT 60.106 36.000 20.22 0.00 43.12 3.01
5665 6218 5.229260 GCTTTAACAAGGAAACGTTGTTCTG 59.771 40.000 20.22 14.27 43.12 3.02
5666 6219 5.883503 TTAACAAGGAAACGTTGTTCTGT 57.116 34.783 20.22 0.80 43.12 3.41
5667 6220 6.981762 TTAACAAGGAAACGTTGTTCTGTA 57.018 33.333 20.22 6.16 43.12 2.74
5668 6221 5.883503 AACAAGGAAACGTTGTTCTGTAA 57.116 34.783 0.00 0.00 43.12 2.41
5669 6222 6.445357 AACAAGGAAACGTTGTTCTGTAAT 57.555 33.333 0.00 0.00 43.12 1.89
5670 6223 5.816919 ACAAGGAAACGTTGTTCTGTAATG 58.183 37.500 0.00 0.00 34.37 1.90
5671 6224 4.483476 AGGAAACGTTGTTCTGTAATGC 57.517 40.909 0.00 0.00 0.00 3.56
5672 6225 4.134563 AGGAAACGTTGTTCTGTAATGCT 58.865 39.130 0.00 0.00 0.00 3.79
5673 6226 5.302360 AGGAAACGTTGTTCTGTAATGCTA 58.698 37.500 0.00 0.00 0.00 3.49
5674 6227 5.178809 AGGAAACGTTGTTCTGTAATGCTAC 59.821 40.000 0.00 0.00 0.00 3.58
5675 6228 5.352643 AAACGTTGTTCTGTAATGCTACC 57.647 39.130 0.00 0.00 0.00 3.18
5676 6229 4.267349 ACGTTGTTCTGTAATGCTACCT 57.733 40.909 0.00 0.00 0.00 3.08
5677 6230 4.638304 ACGTTGTTCTGTAATGCTACCTT 58.362 39.130 0.00 0.00 0.00 3.50
5678 6231 4.689345 ACGTTGTTCTGTAATGCTACCTTC 59.311 41.667 0.00 0.00 0.00 3.46
5679 6232 4.201589 CGTTGTTCTGTAATGCTACCTTCG 60.202 45.833 0.00 0.00 0.00 3.79
5680 6233 3.857052 TGTTCTGTAATGCTACCTTCGG 58.143 45.455 0.00 0.00 0.00 4.30
5681 6234 3.259876 TGTTCTGTAATGCTACCTTCGGT 59.740 43.478 0.00 0.00 40.16 4.69
5682 6235 3.795623 TCTGTAATGCTACCTTCGGTC 57.204 47.619 0.00 0.00 37.09 4.79
5683 6236 2.429610 TCTGTAATGCTACCTTCGGTCC 59.570 50.000 0.00 0.00 37.09 4.46
5684 6237 2.167693 CTGTAATGCTACCTTCGGTCCA 59.832 50.000 0.00 0.00 37.09 4.02
5685 6238 2.769663 TGTAATGCTACCTTCGGTCCAT 59.230 45.455 0.00 0.00 37.09 3.41
5686 6239 3.962063 TGTAATGCTACCTTCGGTCCATA 59.038 43.478 0.00 0.00 37.09 2.74
5687 6240 4.406326 TGTAATGCTACCTTCGGTCCATAA 59.594 41.667 0.00 0.00 37.09 1.90
5688 6241 4.497291 AATGCTACCTTCGGTCCATAAA 57.503 40.909 0.00 0.00 37.09 1.40
5689 6242 3.985019 TGCTACCTTCGGTCCATAAAA 57.015 42.857 0.00 0.00 37.09 1.52
5690 6243 3.869065 TGCTACCTTCGGTCCATAAAAG 58.131 45.455 0.00 0.00 37.09 2.27
5691 6244 3.516300 TGCTACCTTCGGTCCATAAAAGA 59.484 43.478 0.00 0.00 37.09 2.52
5692 6245 4.163458 TGCTACCTTCGGTCCATAAAAGAT 59.837 41.667 0.00 0.00 37.09 2.40
5693 6246 4.511826 GCTACCTTCGGTCCATAAAAGATG 59.488 45.833 0.00 0.00 37.09 2.90
5694 6247 4.569719 ACCTTCGGTCCATAAAAGATGT 57.430 40.909 0.00 0.00 0.00 3.06
5695 6248 4.514401 ACCTTCGGTCCATAAAAGATGTC 58.486 43.478 0.00 0.00 0.00 3.06
5696 6249 3.555956 CCTTCGGTCCATAAAAGATGTCG 59.444 47.826 0.00 0.00 0.00 4.35
5697 6250 2.546778 TCGGTCCATAAAAGATGTCGC 58.453 47.619 0.00 0.00 0.00 5.19
5698 6251 1.257936 CGGTCCATAAAAGATGTCGCG 59.742 52.381 0.00 0.00 0.00 5.87
5699 6252 1.597663 GGTCCATAAAAGATGTCGCGG 59.402 52.381 6.13 0.00 0.00 6.46
5700 6253 1.003866 GTCCATAAAAGATGTCGCGGC 60.004 52.381 2.29 2.29 0.00 6.53
5701 6254 1.134521 TCCATAAAAGATGTCGCGGCT 60.135 47.619 13.81 0.00 0.00 5.52
5702 6255 2.101750 TCCATAAAAGATGTCGCGGCTA 59.898 45.455 13.81 0.00 0.00 3.93
5703 6256 2.476619 CCATAAAAGATGTCGCGGCTAG 59.523 50.000 13.81 0.00 0.00 3.42
5704 6257 2.953466 TAAAAGATGTCGCGGCTAGT 57.047 45.000 13.81 0.00 0.00 2.57
5705 6258 2.094762 AAAAGATGTCGCGGCTAGTT 57.905 45.000 13.81 0.00 0.00 2.24
5706 6259 1.641577 AAAGATGTCGCGGCTAGTTC 58.358 50.000 13.81 3.76 0.00 3.01
5707 6260 0.530744 AAGATGTCGCGGCTAGTTCA 59.469 50.000 13.81 0.00 0.00 3.18
5708 6261 0.530744 AGATGTCGCGGCTAGTTCAA 59.469 50.000 13.81 0.00 0.00 2.69
5709 6262 1.067142 AGATGTCGCGGCTAGTTCAAA 60.067 47.619 13.81 0.00 0.00 2.69
5710 6263 1.730064 GATGTCGCGGCTAGTTCAAAA 59.270 47.619 13.81 0.00 0.00 2.44
5711 6264 0.863144 TGTCGCGGCTAGTTCAAAAC 59.137 50.000 13.81 0.00 0.00 2.43
5712 6265 1.145803 GTCGCGGCTAGTTCAAAACT 58.854 50.000 1.90 0.00 45.40 2.66
5713 6266 1.136336 GTCGCGGCTAGTTCAAAACTG 60.136 52.381 1.90 0.00 42.84 3.16
5714 6267 0.452784 CGCGGCTAGTTCAAAACTGC 60.453 55.000 0.00 4.64 42.84 4.40
5715 6268 0.452784 GCGGCTAGTTCAAAACTGCG 60.453 55.000 2.65 0.00 42.84 5.18
5716 6269 1.144969 CGGCTAGTTCAAAACTGCGA 58.855 50.000 2.65 0.00 42.84 5.10
5717 6270 1.732259 CGGCTAGTTCAAAACTGCGAT 59.268 47.619 2.65 0.00 42.84 4.58
5718 6271 2.474526 CGGCTAGTTCAAAACTGCGATG 60.475 50.000 2.65 0.00 42.84 3.84
5719 6272 2.509870 GCTAGTTCAAAACTGCGATGC 58.490 47.619 2.65 0.00 42.84 3.91
5720 6273 2.160417 GCTAGTTCAAAACTGCGATGCT 59.840 45.455 2.65 0.00 42.84 3.79
5721 6274 3.365364 GCTAGTTCAAAACTGCGATGCTT 60.365 43.478 2.65 0.00 42.84 3.91
5722 6275 4.142902 GCTAGTTCAAAACTGCGATGCTTA 60.143 41.667 2.65 0.00 42.84 3.09
5723 6276 5.447818 GCTAGTTCAAAACTGCGATGCTTAT 60.448 40.000 2.65 0.00 42.84 1.73
5724 6277 5.376854 AGTTCAAAACTGCGATGCTTATT 57.623 34.783 0.00 0.00 41.01 1.40
5725 6278 5.772521 AGTTCAAAACTGCGATGCTTATTT 58.227 33.333 0.00 0.00 41.01 1.40
5726 6279 6.215845 AGTTCAAAACTGCGATGCTTATTTT 58.784 32.000 0.00 0.00 41.01 1.82
5727 6280 6.144402 AGTTCAAAACTGCGATGCTTATTTTG 59.856 34.615 14.12 14.12 41.01 2.44
5728 6281 5.767269 TCAAAACTGCGATGCTTATTTTGA 58.233 33.333 16.77 16.77 39.44 2.69
5729 6282 6.212235 TCAAAACTGCGATGCTTATTTTGAA 58.788 32.000 17.65 8.41 39.15 2.69
5730 6283 6.867816 TCAAAACTGCGATGCTTATTTTGAAT 59.132 30.769 17.65 0.00 39.15 2.57
5731 6284 6.875926 AAACTGCGATGCTTATTTTGAATC 57.124 33.333 0.00 0.00 0.00 2.52
5732 6285 5.565592 ACTGCGATGCTTATTTTGAATCA 57.434 34.783 0.00 0.00 0.00 2.57
5733 6286 5.575957 ACTGCGATGCTTATTTTGAATCAG 58.424 37.500 0.00 0.00 0.00 2.90
5734 6287 5.355071 ACTGCGATGCTTATTTTGAATCAGA 59.645 36.000 0.00 0.00 0.00 3.27
5735 6288 5.813717 TGCGATGCTTATTTTGAATCAGAG 58.186 37.500 0.00 0.00 0.00 3.35
5736 6289 5.210715 GCGATGCTTATTTTGAATCAGAGG 58.789 41.667 0.00 0.00 0.00 3.69
5737 6290 5.755813 CGATGCTTATTTTGAATCAGAGGG 58.244 41.667 0.00 0.00 0.00 4.30
5738 6291 5.528690 CGATGCTTATTTTGAATCAGAGGGA 59.471 40.000 0.00 0.00 0.00 4.20
5739 6292 6.293298 CGATGCTTATTTTGAATCAGAGGGAG 60.293 42.308 0.00 0.00 0.00 4.30
5740 6293 5.819991 TGCTTATTTTGAATCAGAGGGAGT 58.180 37.500 0.00 0.00 0.00 3.85
5741 6294 6.957631 TGCTTATTTTGAATCAGAGGGAGTA 58.042 36.000 0.00 0.00 0.00 2.59
5742 6295 6.823689 TGCTTATTTTGAATCAGAGGGAGTAC 59.176 38.462 0.00 0.00 0.00 2.73
5743 6296 7.051000 GCTTATTTTGAATCAGAGGGAGTACT 58.949 38.462 0.00 0.00 0.00 2.73
5744 6297 7.554476 GCTTATTTTGAATCAGAGGGAGTACTT 59.446 37.037 0.00 0.00 0.00 2.24
5748 6301 9.807921 ATTTTGAATCAGAGGGAGTACTTAAAA 57.192 29.630 0.00 0.00 0.00 1.52
5749 6302 9.635404 TTTTGAATCAGAGGGAGTACTTAAAAA 57.365 29.630 0.00 0.00 0.00 1.94
5750 6303 8.617290 TTGAATCAGAGGGAGTACTTAAAAAC 57.383 34.615 0.00 0.00 0.00 2.43
5751 6304 7.974504 TGAATCAGAGGGAGTACTTAAAAACT 58.025 34.615 0.00 0.00 0.00 2.66
5752 6305 8.437575 TGAATCAGAGGGAGTACTTAAAAACTT 58.562 33.333 0.00 0.00 0.00 2.66
5753 6306 8.622948 AATCAGAGGGAGTACTTAAAAACTTG 57.377 34.615 0.00 0.00 0.00 3.16
5754 6307 7.133133 TCAGAGGGAGTACTTAAAAACTTGT 57.867 36.000 0.00 0.00 0.00 3.16
5755 6308 6.990349 TCAGAGGGAGTACTTAAAAACTTGTG 59.010 38.462 0.00 0.00 0.00 3.33
5756 6309 5.763698 AGAGGGAGTACTTAAAAACTTGTGC 59.236 40.000 0.00 0.00 0.00 4.57
5757 6310 5.442391 AGGGAGTACTTAAAAACTTGTGCA 58.558 37.500 0.00 0.00 0.00 4.57
5758 6311 5.298527 AGGGAGTACTTAAAAACTTGTGCAC 59.701 40.000 10.75 10.75 0.00 4.57
5759 6312 5.506815 GGGAGTACTTAAAAACTTGTGCACC 60.507 44.000 15.69 0.00 0.00 5.01
5760 6313 5.298527 GGAGTACTTAAAAACTTGTGCACCT 59.701 40.000 15.69 0.00 0.00 4.00
5761 6314 6.484308 GGAGTACTTAAAAACTTGTGCACCTA 59.516 38.462 15.69 1.01 0.00 3.08
5762 6315 7.307811 GGAGTACTTAAAAACTTGTGCACCTAG 60.308 40.741 15.69 14.06 0.00 3.02
5763 6316 7.277396 AGTACTTAAAAACTTGTGCACCTAGA 58.723 34.615 15.69 0.00 0.00 2.43
5764 6317 6.619801 ACTTAAAAACTTGTGCACCTAGAG 57.380 37.500 15.69 9.51 0.00 2.43
5765 6318 5.531287 ACTTAAAAACTTGTGCACCTAGAGG 59.469 40.000 15.69 0.00 42.17 3.69
5766 6319 1.897560 AAACTTGTGCACCTAGAGGC 58.102 50.000 15.69 0.00 39.32 4.70
5767 6320 1.059913 AACTTGTGCACCTAGAGGCT 58.940 50.000 15.69 0.00 39.32 4.58
5768 6321 1.938585 ACTTGTGCACCTAGAGGCTA 58.061 50.000 15.69 0.00 39.32 3.93
5769 6322 1.827969 ACTTGTGCACCTAGAGGCTAG 59.172 52.381 15.69 0.00 39.32 3.42
5770 6323 1.137872 CTTGTGCACCTAGAGGCTAGG 59.862 57.143 15.69 16.84 39.32 3.02
5778 6331 4.604784 ACCTAGAGGCTAGGTGAGTAAA 57.395 45.455 21.86 0.00 45.56 2.01
5779 6332 4.944177 ACCTAGAGGCTAGGTGAGTAAAA 58.056 43.478 21.86 0.00 45.56 1.52
5780 6333 4.957327 ACCTAGAGGCTAGGTGAGTAAAAG 59.043 45.833 21.86 0.00 45.56 2.27
5781 6334 4.342665 CCTAGAGGCTAGGTGAGTAAAAGG 59.657 50.000 11.50 0.00 0.00 3.11
5782 6335 2.502130 AGAGGCTAGGTGAGTAAAAGGC 59.498 50.000 0.00 0.00 0.00 4.35
5783 6336 1.560146 AGGCTAGGTGAGTAAAAGGCC 59.440 52.381 0.00 0.00 38.71 5.19
5784 6337 1.280998 GGCTAGGTGAGTAAAAGGCCA 59.719 52.381 5.01 0.00 38.35 5.36
5785 6338 2.633488 GCTAGGTGAGTAAAAGGCCAG 58.367 52.381 5.01 0.00 0.00 4.85
5786 6339 2.027100 GCTAGGTGAGTAAAAGGCCAGT 60.027 50.000 5.01 0.00 0.00 4.00
5787 6340 3.197116 GCTAGGTGAGTAAAAGGCCAGTA 59.803 47.826 5.01 0.00 0.00 2.74
5788 6341 3.983044 AGGTGAGTAAAAGGCCAGTAG 57.017 47.619 5.01 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.684734 GGAGCGGGTAGGGTGAAGA 60.685 63.158 0.00 0.00 0.00 2.87
54 63 0.953960 AAAGTGGTTAAGCGAGCGGG 60.954 55.000 0.00 0.00 0.00 6.13
57 66 0.109735 GGCAAAGTGGTTAAGCGAGC 60.110 55.000 0.00 0.00 0.00 5.03
107 121 0.467106 TGCCTTTAACCTGCACTGCA 60.467 50.000 3.11 3.11 36.92 4.41
186 234 2.287788 GGATCCAAGCAACACAACACAG 60.288 50.000 6.95 0.00 0.00 3.66
189 237 2.363306 AGGATCCAAGCAACACAACA 57.637 45.000 15.82 0.00 0.00 3.33
190 238 3.428045 GCATAGGATCCAAGCAACACAAC 60.428 47.826 15.82 0.00 0.00 3.32
191 239 2.754552 GCATAGGATCCAAGCAACACAA 59.245 45.455 15.82 0.00 0.00 3.33
192 240 2.290832 TGCATAGGATCCAAGCAACACA 60.291 45.455 19.45 3.00 31.42 3.72
193 241 2.368439 TGCATAGGATCCAAGCAACAC 58.632 47.619 19.45 0.64 31.42 3.32
259 324 3.060602 GAGGTTCGGTTCTGTTCTTGAG 58.939 50.000 0.00 0.00 0.00 3.02
262 327 3.325135 AGATGAGGTTCGGTTCTGTTCTT 59.675 43.478 0.00 0.00 0.00 2.52
266 331 2.248248 TCAGATGAGGTTCGGTTCTGT 58.752 47.619 0.00 0.00 36.17 3.41
267 332 3.319137 TTCAGATGAGGTTCGGTTCTG 57.681 47.619 0.00 0.00 36.09 3.02
268 333 5.677319 TTATTCAGATGAGGTTCGGTTCT 57.323 39.130 0.00 0.00 0.00 3.01
269 334 6.719365 CAATTATTCAGATGAGGTTCGGTTC 58.281 40.000 0.00 0.00 0.00 3.62
270 335 5.066505 GCAATTATTCAGATGAGGTTCGGTT 59.933 40.000 0.00 0.00 0.00 4.44
271 336 4.576463 GCAATTATTCAGATGAGGTTCGGT 59.424 41.667 0.00 0.00 0.00 4.69
272 337 4.319046 CGCAATTATTCAGATGAGGTTCGG 60.319 45.833 0.00 0.00 0.00 4.30
273 338 4.507756 TCGCAATTATTCAGATGAGGTTCG 59.492 41.667 0.00 0.00 0.00 3.95
274 339 5.755375 TCTCGCAATTATTCAGATGAGGTTC 59.245 40.000 0.00 0.00 0.00 3.62
275 340 5.674525 TCTCGCAATTATTCAGATGAGGTT 58.325 37.500 0.00 0.00 0.00 3.50
276 341 5.282055 TCTCGCAATTATTCAGATGAGGT 57.718 39.130 0.00 0.00 0.00 3.85
324 389 6.916387 GTGCAGCATAATAATGGATATCATGC 59.084 38.462 11.89 11.89 38.02 4.06
346 439 1.458445 GGGTCGTTTTACTTCGAGTGC 59.542 52.381 0.00 0.00 36.76 4.40
366 459 2.609459 GCGTCAGGTGAGGTGATAATTG 59.391 50.000 1.93 0.00 32.91 2.32
425 524 5.010719 ACTCTGTCGAAATCAAGAACAGGTA 59.989 40.000 0.00 0.00 0.00 3.08
430 529 7.586664 GGTTTAAACTCTGTCGAAATCAAGAAC 59.413 37.037 17.50 0.00 0.00 3.01
465 564 1.221466 CGCAACGCAGAAACTCTCCA 61.221 55.000 0.00 0.00 0.00 3.86
469 568 0.859232 TCTTCGCAACGCAGAAACTC 59.141 50.000 0.00 0.00 0.00 3.01
484 583 0.802607 CGTTAGCAGTCGGCCTCTTC 60.803 60.000 0.00 0.00 46.50 2.87
654 765 1.463444 CTGGGGACGTTTCTTTAAGCG 59.537 52.381 0.00 0.00 43.96 4.68
655 766 1.810755 CCTGGGGACGTTTCTTTAAGC 59.189 52.381 0.00 0.00 0.00 3.09
656 767 3.072211 GACCTGGGGACGTTTCTTTAAG 58.928 50.000 0.00 0.00 0.00 1.85
657 768 2.224597 GGACCTGGGGACGTTTCTTTAA 60.225 50.000 0.00 0.00 0.00 1.52
697 809 6.603599 GCTGGGTCTCTGTTTCCTTATTTTAT 59.396 38.462 0.00 0.00 0.00 1.40
770 892 0.039035 AGAGGAGAGGAGAGCACGTT 59.961 55.000 0.00 0.00 0.00 3.99
812 934 1.762460 GAATGCGGAGAGGGGGAGA 60.762 63.158 0.00 0.00 0.00 3.71
822 944 4.090588 GGTGGGACGGAATGCGGA 62.091 66.667 0.00 0.00 0.00 5.54
939 1065 4.840005 GGAAGGCGGCCGGAGAAG 62.840 72.222 29.38 0.00 0.00 2.85
970 1096 1.302192 CGAGGAAAACCTGGGCGAA 60.302 57.895 0.00 0.00 0.00 4.70
973 1099 3.062466 GGCGAGGAAAACCTGGGC 61.062 66.667 8.72 8.72 34.55 5.36
1118 1250 6.446318 TCAAATTTCAAGATTCAAACGGAGG 58.554 36.000 0.00 0.00 0.00 4.30
1119 1251 7.928908 TTCAAATTTCAAGATTCAAACGGAG 57.071 32.000 0.00 0.00 0.00 4.63
1179 1311 2.076863 CGCCTCGGATCAGTTTCTTTT 58.923 47.619 0.00 0.00 0.00 2.27
1223 1356 9.929722 CCAATGCATTATGATTTGAAGAAAATG 57.070 29.630 12.53 0.00 38.64 2.32
1351 1489 1.450669 TATTTCACGCCGGGGAAGC 60.451 57.895 27.23 0.00 0.00 3.86
1401 1539 9.348476 TGAGGCAATAAACATGTAGCATAATAA 57.652 29.630 0.00 0.00 0.00 1.40
1406 1544 5.068198 CCTTGAGGCAATAAACATGTAGCAT 59.932 40.000 0.00 0.00 0.00 3.79
1407 1545 4.398988 CCTTGAGGCAATAAACATGTAGCA 59.601 41.667 0.00 0.00 0.00 3.49
1408 1546 4.399303 ACCTTGAGGCAATAAACATGTAGC 59.601 41.667 0.00 0.00 39.32 3.58
1427 1569 0.692419 ATCCCATGCTCCTCGACCTT 60.692 55.000 0.00 0.00 0.00 3.50
1447 1589 6.361114 CGTTGTGCAATGCATTGAAAAATTA 58.639 32.000 37.36 9.85 41.91 1.40
1533 1679 7.655328 AGAAATCAAAATTAAATCAACGTGCCA 59.345 29.630 0.00 0.00 0.00 4.92
1534 1680 7.951565 CAGAAATCAAAATTAAATCAACGTGCC 59.048 33.333 0.00 0.00 0.00 5.01
1535 1681 7.475256 GCAGAAATCAAAATTAAATCAACGTGC 59.525 33.333 0.00 0.00 0.00 5.34
1536 1682 7.951565 GGCAGAAATCAAAATTAAATCAACGTG 59.048 33.333 0.00 0.00 0.00 4.49
1537 1683 7.655328 TGGCAGAAATCAAAATTAAATCAACGT 59.345 29.630 0.00 0.00 0.00 3.99
1538 1684 8.016497 TGGCAGAAATCAAAATTAAATCAACG 57.984 30.769 0.00 0.00 0.00 4.10
1552 1747 3.753815 TGACATGAACTGGCAGAAATCA 58.246 40.909 23.66 20.75 38.24 2.57
1554 1749 4.586001 AGTTTGACATGAACTGGCAGAAAT 59.414 37.500 23.66 8.46 45.91 2.17
1556 1751 3.554934 AGTTTGACATGAACTGGCAGAA 58.445 40.909 23.66 6.63 45.91 3.02
1618 1813 2.203773 GGTGGGGGCAATGTTGGT 60.204 61.111 0.00 0.00 0.00 3.67
1630 1825 3.123804 CTCGATAAAAGATGTCGGTGGG 58.876 50.000 0.00 0.00 42.30 4.61
1672 1867 4.733523 GCCTGAAAGAACACGAACAAACAT 60.734 41.667 0.00 0.00 34.07 2.71
1710 1907 1.556911 AGCATCCTTCAACGGACTGAT 59.443 47.619 0.00 0.00 35.52 2.90
1730 1927 3.479489 TGCACTGAATTTGAGCTTCTCA 58.521 40.909 0.00 0.00 38.87 3.27
1790 1987 9.615295 TTTATTTTACACTTTGATCCGCTTTAC 57.385 29.630 0.00 0.00 0.00 2.01
1867 2192 9.150348 CACACGCTATAAACATAATATCCATGA 57.850 33.333 0.00 0.00 0.00 3.07
1870 2195 7.446769 ACCACACGCTATAAACATAATATCCA 58.553 34.615 0.00 0.00 0.00 3.41
1906 2231 8.035394 TCAAACACCAAAACTAAAATGCAAGTA 58.965 29.630 0.00 0.00 0.00 2.24
1933 2259 1.135315 AGCCTGCATGTAAATTGTGCG 60.135 47.619 0.00 0.00 41.61 5.34
1948 2274 1.404583 GCATAGCCAAAAACCAGCCTG 60.405 52.381 0.00 0.00 0.00 4.85
1960 2286 2.132300 TGCAGGATACGCATAGCCA 58.868 52.632 0.00 0.00 39.54 4.75
2079 2408 3.624861 CCTAGGCTAATGCTGTGAACTTG 59.375 47.826 0.00 0.00 39.59 3.16
2346 2675 5.464168 CAAAATAGAAGTTGCAAGGGACAG 58.536 41.667 0.00 0.00 0.00 3.51
2390 2727 3.414269 TGCAATGAAAGCACAGATCAGA 58.586 40.909 0.00 0.00 37.02 3.27
2748 3085 5.066505 GTGTGCAAAGAGAAAAGGAGAAAGA 59.933 40.000 0.00 0.00 0.00 2.52
2846 3183 4.592485 ATTATCACGGGACAGAGATGAC 57.408 45.455 0.00 0.00 0.00 3.06
2881 3218 1.327690 TACAGGGGTGCCGATCACTC 61.328 60.000 7.51 3.88 45.55 3.51
2886 3223 1.502690 TACATTACAGGGGTGCCGAT 58.497 50.000 0.00 0.00 0.00 4.18
2888 3225 1.946768 CAATACATTACAGGGGTGCCG 59.053 52.381 0.00 0.00 0.00 5.69
2899 3236 8.630054 AAGTGTTCCTAAACTGCAATACATTA 57.370 30.769 0.00 0.00 36.30 1.90
2945 3282 9.003658 AGACAAGATTTTTACATAGTTGTCCTG 57.996 33.333 8.32 0.00 42.02 3.86
3016 3353 1.813513 AGCTTTCTGCAGCACGTATT 58.186 45.000 9.47 0.00 45.94 1.89
3019 3356 0.249868 TGTAGCTTTCTGCAGCACGT 60.250 50.000 9.47 0.00 45.94 4.49
3102 3440 6.347240 GCATTCATAGTACAGATGCTAGCAAC 60.347 42.308 23.54 19.83 0.00 4.17
3118 3456 5.691754 TGCGTAGTTCAGTATGCATTCATAG 59.308 40.000 3.54 0.00 39.50 2.23
3264 3602 5.598005 ACAACACTTCAGGATCCAAATGAAA 59.402 36.000 15.82 0.22 32.87 2.69
3288 3626 7.204604 TCCTAGATCGCGATAACAAAATTACA 58.795 34.615 23.76 0.00 0.00 2.41
3312 3650 3.703001 TGTGATTCTCCTGGTCCTTTC 57.297 47.619 0.00 0.00 0.00 2.62
3330 3676 8.228035 TGTTAAAGTAAAATACTGCCACTTGT 57.772 30.769 0.00 0.00 39.39 3.16
3351 3697 9.523168 AGCCAAGGTACAGTTTTTATATTGTTA 57.477 29.630 0.00 0.00 0.00 2.41
3353 3699 8.303876 CAAGCCAAGGTACAGTTTTTATATTGT 58.696 33.333 0.00 0.00 0.00 2.71
3354 3700 8.303876 ACAAGCCAAGGTACAGTTTTTATATTG 58.696 33.333 0.00 0.00 0.00 1.90
3355 3701 8.417273 ACAAGCCAAGGTACAGTTTTTATATT 57.583 30.769 0.00 0.00 0.00 1.28
3356 3702 8.953313 GTACAAGCCAAGGTACAGTTTTTATAT 58.047 33.333 0.00 0.00 39.65 0.86
3357 3703 8.158789 AGTACAAGCCAAGGTACAGTTTTTATA 58.841 33.333 0.00 0.00 41.74 0.98
3367 3713 3.497262 GTGTTCAGTACAAGCCAAGGTAC 59.503 47.826 0.00 0.00 38.80 3.34
3407 3753 8.208718 TCAATAACTGGTAAGTGATAATGCAC 57.791 34.615 0.00 0.00 36.51 4.57
3465 3812 9.976511 CTAGTTTACAACTGAATATATTCCCGA 57.023 33.333 20.29 3.82 42.84 5.14
3466 3813 9.204570 CCTAGTTTACAACTGAATATATTCCCG 57.795 37.037 20.29 14.28 42.84 5.14
3519 3866 1.019278 AATGCTGGCGTCTTACCACG 61.019 55.000 0.00 0.00 42.95 4.94
3529 3876 1.605710 CAGGAGGATAAAATGCTGGCG 59.394 52.381 0.00 0.00 31.83 5.69
3575 3922 0.460284 GTGCCACCAGACGGTAGATG 60.460 60.000 0.00 0.00 46.94 2.90
3576 3923 0.614979 AGTGCCACCAGACGGTAGAT 60.615 55.000 0.00 0.00 46.94 1.98
3611 3958 8.677300 GCAGTTCCAAATGAATCTTAAGATGTA 58.323 33.333 18.61 10.95 34.90 2.29
3612 3959 7.395489 AGCAGTTCCAAATGAATCTTAAGATGT 59.605 33.333 18.61 8.96 34.90 3.06
3613 3960 7.769220 AGCAGTTCCAAATGAATCTTAAGATG 58.231 34.615 18.61 6.63 34.90 2.90
3614 3961 7.951347 AGCAGTTCCAAATGAATCTTAAGAT 57.049 32.000 12.37 12.37 34.90 2.40
3620 3969 9.023962 TGTTTTATAGCAGTTCCAAATGAATCT 57.976 29.630 0.00 0.00 34.90 2.40
3622 3971 9.590451 CATGTTTTATAGCAGTTCCAAATGAAT 57.410 29.630 0.00 0.00 34.90 2.57
3646 3995 8.292448 GTCAAACAAAGTGACAGATGTAATCAT 58.708 33.333 0.00 0.00 43.02 2.45
3647 3996 7.639039 GTCAAACAAAGTGACAGATGTAATCA 58.361 34.615 0.00 0.00 43.02 2.57
3682 4037 9.269453 CATATGAGATGAAATGCTAGAGAACAA 57.731 33.333 0.00 0.00 0.00 2.83
3683 4038 8.427276 ACATATGAGATGAAATGCTAGAGAACA 58.573 33.333 10.38 0.00 0.00 3.18
3691 4049 5.938279 ACAGGACATATGAGATGAAATGCT 58.062 37.500 10.38 0.00 0.00 3.79
3709 4067 3.572255 GGGCATGTTTCTTTGTTACAGGA 59.428 43.478 0.00 0.00 0.00 3.86
3725 4083 1.793258 TCAATTTGCAAACGGGCATG 58.207 45.000 15.41 7.22 44.48 4.06
3728 4086 4.999751 TTTAATCAATTTGCAAACGGGC 57.000 36.364 15.41 0.00 0.00 6.13
3731 4089 9.483062 TTTCAGTTTTTAATCAATTTGCAAACG 57.517 25.926 15.41 9.07 31.03 3.60
3766 4125 7.180408 GGCCACTTCTAGATATCAGGGTATTTA 59.820 40.741 5.32 0.00 0.00 1.40
3770 4129 4.417437 GGCCACTTCTAGATATCAGGGTA 58.583 47.826 5.32 0.00 0.00 3.69
3907 4278 0.742281 CCAGAACTCCAGATGGTGCG 60.742 60.000 0.00 0.00 36.34 5.34
3923 4294 3.146104 ACATGTGGAAGGAAAGTCCAG 57.854 47.619 0.00 0.00 45.85 3.86
3980 4351 6.783708 TTAAAACCAATCTTCGGCCATATT 57.216 33.333 2.24 0.00 0.00 1.28
3981 4352 6.783708 TTTAAAACCAATCTTCGGCCATAT 57.216 33.333 2.24 0.00 0.00 1.78
4028 4399 1.069978 CCCCCAAGACGCACAATTTTT 59.930 47.619 0.00 0.00 0.00 1.94
4029 4400 0.678950 CCCCCAAGACGCACAATTTT 59.321 50.000 0.00 0.00 0.00 1.82
4030 4401 2.350738 CCCCCAAGACGCACAATTT 58.649 52.632 0.00 0.00 0.00 1.82
4031 4402 4.095590 CCCCCAAGACGCACAATT 57.904 55.556 0.00 0.00 0.00 2.32
4056 4427 0.478072 AATGCAACCAGTCTGGGACA 59.522 50.000 23.06 16.80 43.37 4.02
4059 4430 2.795329 AGTTAATGCAACCAGTCTGGG 58.205 47.619 23.06 7.28 43.37 4.45
4112 4483 9.507329 ACTGCATTTGAGACTTTAATAGAAAGA 57.493 29.630 4.14 0.00 0.00 2.52
4169 4540 0.179048 TGTGACTGCTGTGGTTCCTG 60.179 55.000 0.00 0.00 0.00 3.86
4198 4584 0.886490 GTTGCTGCTGCTGTACCTGT 60.886 55.000 17.00 0.00 40.48 4.00
4204 4590 1.321805 TTTGTGGTTGCTGCTGCTGT 61.322 50.000 17.00 0.00 40.48 4.40
4267 4653 4.060038 GCCATTGCTGCTTGCCGT 62.060 61.111 0.00 0.00 42.00 5.68
4297 4683 0.332972 GGGAAATGGGCTTGGTCTCT 59.667 55.000 0.00 0.00 0.00 3.10
4310 4696 1.256812 CGCTTGAACTTGGGGGAAAT 58.743 50.000 0.00 0.00 0.00 2.17
4322 4708 0.518636 GCTGATGCTTGACGCTTGAA 59.481 50.000 0.00 0.00 40.11 2.69
4342 4728 2.597510 GCCGCTGGACCACCTTTT 60.598 61.111 0.00 0.00 37.04 2.27
4387 4773 0.319469 CATCGGGTTTTGTTGTGGGC 60.319 55.000 0.00 0.00 0.00 5.36
4394 4780 3.485463 TGTCTTCTCATCGGGTTTTGT 57.515 42.857 0.00 0.00 0.00 2.83
4504 4890 1.271840 ATACTTCGGCTTCAGGGGCA 61.272 55.000 0.00 0.00 0.00 5.36
4550 4936 2.594592 GCCCTCCACAGCAACGTT 60.595 61.111 0.00 0.00 0.00 3.99
4582 4968 0.260230 TCTCCTCCTCTAGTGCAGGG 59.740 60.000 1.94 0.00 0.00 4.45
4665 5051 1.032114 AGCTAAGTTTCATGCGGGGC 61.032 55.000 0.00 0.00 0.00 5.80
4666 5052 0.734889 CAGCTAAGTTTCATGCGGGG 59.265 55.000 0.00 0.00 0.00 5.73
4667 5053 0.099436 GCAGCTAAGTTTCATGCGGG 59.901 55.000 0.00 0.00 0.00 6.13
4668 5054 0.804364 TGCAGCTAAGTTTCATGCGG 59.196 50.000 0.00 0.00 39.74 5.69
4679 5065 3.749665 AAAACAATGGCTTGCAGCTAA 57.250 38.095 7.85 0.00 41.99 3.09
4739 5126 5.221422 CCACCAAACAACATGACAACCTAAT 60.221 40.000 0.00 0.00 0.00 1.73
4744 5131 3.380004 TCTCCACCAAACAACATGACAAC 59.620 43.478 0.00 0.00 0.00 3.32
4757 5144 4.536090 ACCAACAGATATTCTCTCCACCAA 59.464 41.667 0.00 0.00 29.16 3.67
4782 5169 3.888930 TGAAACAGAAGGACCAATTGGAC 59.111 43.478 31.22 24.01 38.94 4.02
4810 5197 5.437191 AGAAGAAAGGAACGGGTGATAAT 57.563 39.130 0.00 0.00 0.00 1.28
4811 5198 4.903045 AGAAGAAAGGAACGGGTGATAA 57.097 40.909 0.00 0.00 0.00 1.75
5019 5481 8.836413 TCCAACAAGAAGTTCTAATGTTGTAAG 58.164 33.333 30.51 22.10 40.75 2.34
5032 5537 6.070824 ACAACATCCTTTTCCAACAAGAAGTT 60.071 34.615 0.00 0.00 42.42 2.66
5055 5560 3.023119 ACAAGTTCCAAGAACATGCACA 58.977 40.909 11.43 0.00 0.00 4.57
5057 5562 3.181477 CCAACAAGTTCCAAGAACATGCA 60.181 43.478 11.43 0.00 0.00 3.96
5068 5573 3.826729 AGTAGCCATTTCCAACAAGTTCC 59.173 43.478 0.00 0.00 0.00 3.62
5117 5625 6.149308 CCTATTTTCTTGACATGTGTACAGCA 59.851 38.462 1.15 0.00 0.00 4.41
5118 5626 6.149474 ACCTATTTTCTTGACATGTGTACAGC 59.851 38.462 1.15 0.00 0.00 4.40
5119 5627 7.672983 ACCTATTTTCTTGACATGTGTACAG 57.327 36.000 1.15 0.00 0.00 2.74
5120 5628 9.161629 CATACCTATTTTCTTGACATGTGTACA 57.838 33.333 1.15 0.00 0.00 2.90
5121 5629 8.122952 GCATACCTATTTTCTTGACATGTGTAC 58.877 37.037 1.15 0.00 0.00 2.90
5122 5630 7.282224 GGCATACCTATTTTCTTGACATGTGTA 59.718 37.037 1.15 0.00 0.00 2.90
5123 5631 6.095440 GGCATACCTATTTTCTTGACATGTGT 59.905 38.462 1.15 0.00 0.00 3.72
5124 5632 6.460123 GGGCATACCTATTTTCTTGACATGTG 60.460 42.308 1.15 0.00 35.85 3.21
5125 5633 5.594317 GGGCATACCTATTTTCTTGACATGT 59.406 40.000 0.00 0.00 35.85 3.21
5126 5634 5.593909 TGGGCATACCTATTTTCTTGACATG 59.406 40.000 0.00 0.00 41.11 3.21
5127 5635 5.765510 TGGGCATACCTATTTTCTTGACAT 58.234 37.500 0.00 0.00 41.11 3.06
5181 5720 5.239306 TGCTTTTGTCATGGTTGTTCTCTAG 59.761 40.000 0.00 0.00 0.00 2.43
5250 5790 0.386838 AAAGCTTCCACAAGTGCTGC 59.613 50.000 0.00 0.00 35.79 5.25
5325 5876 1.577468 TCATTCACACACCGACACAC 58.423 50.000 0.00 0.00 0.00 3.82
5326 5877 2.542020 ATCATTCACACACCGACACA 57.458 45.000 0.00 0.00 0.00 3.72
5327 5878 2.095768 CCAATCATTCACACACCGACAC 60.096 50.000 0.00 0.00 0.00 3.67
5328 5879 2.150390 CCAATCATTCACACACCGACA 58.850 47.619 0.00 0.00 0.00 4.35
5329 5880 2.151202 ACCAATCATTCACACACCGAC 58.849 47.619 0.00 0.00 0.00 4.79
5330 5881 2.559698 ACCAATCATTCACACACCGA 57.440 45.000 0.00 0.00 0.00 4.69
5331 5882 3.595173 TCTACCAATCATTCACACACCG 58.405 45.455 0.00 0.00 0.00 4.94
5332 5883 5.957842 TTTCTACCAATCATTCACACACC 57.042 39.130 0.00 0.00 0.00 4.16
5397 5949 6.764308 TTCATGGATTCAGAAAAGACATCC 57.236 37.500 0.00 0.00 34.96 3.51
5398 5950 6.750963 GCTTTCATGGATTCAGAAAAGACATC 59.249 38.462 12.82 0.00 33.64 3.06
5440 5992 6.672266 ATATCAACGATCAATCACTAGGGT 57.328 37.500 0.00 0.00 0.00 4.34
5532 6085 6.257849 TGTTTATATGAGTTCCATGTCTTCGC 59.742 38.462 0.00 0.00 36.71 4.70
5559 6112 2.979813 GGATTACACGCAGCAAGTTTTG 59.020 45.455 0.00 0.00 0.00 2.44
5560 6113 2.621055 TGGATTACACGCAGCAAGTTTT 59.379 40.909 0.00 0.00 0.00 2.43
5561 6114 2.226330 TGGATTACACGCAGCAAGTTT 58.774 42.857 0.00 0.00 0.00 2.66
5562 6115 1.890876 TGGATTACACGCAGCAAGTT 58.109 45.000 0.00 0.00 0.00 2.66
5563 6116 2.113860 ATGGATTACACGCAGCAAGT 57.886 45.000 0.00 0.00 0.00 3.16
5564 6117 2.419673 TGAATGGATTACACGCAGCAAG 59.580 45.455 0.00 0.00 0.00 4.01
5565 6118 2.431454 TGAATGGATTACACGCAGCAA 58.569 42.857 0.00 0.00 0.00 3.91
5566 6119 2.106477 TGAATGGATTACACGCAGCA 57.894 45.000 0.00 0.00 0.00 4.41
5567 6120 3.119849 ACTTTGAATGGATTACACGCAGC 60.120 43.478 0.00 0.00 0.00 5.25
5568 6121 4.685169 ACTTTGAATGGATTACACGCAG 57.315 40.909 0.00 0.00 0.00 5.18
5569 6122 4.517075 TCAACTTTGAATGGATTACACGCA 59.483 37.500 0.00 0.00 33.55 5.24
5570 6123 5.041951 TCAACTTTGAATGGATTACACGC 57.958 39.130 0.00 0.00 33.55 5.34
5582 6135 6.072618 TGTCGTGGTTTTAGTTCAACTTTGAA 60.073 34.615 0.00 0.07 44.31 2.69
5583 6136 5.411977 TGTCGTGGTTTTAGTTCAACTTTGA 59.588 36.000 0.00 0.00 34.92 2.69
5584 6137 5.510323 GTGTCGTGGTTTTAGTTCAACTTTG 59.490 40.000 0.00 0.00 0.00 2.77
5585 6138 5.392272 GGTGTCGTGGTTTTAGTTCAACTTT 60.392 40.000 0.00 0.00 0.00 2.66
5586 6139 4.095334 GGTGTCGTGGTTTTAGTTCAACTT 59.905 41.667 0.00 0.00 0.00 2.66
5587 6140 3.624410 GGTGTCGTGGTTTTAGTTCAACT 59.376 43.478 0.00 0.00 0.00 3.16
5588 6141 3.544637 CGGTGTCGTGGTTTTAGTTCAAC 60.545 47.826 0.00 0.00 0.00 3.18
5589 6142 2.608546 CGGTGTCGTGGTTTTAGTTCAA 59.391 45.455 0.00 0.00 0.00 2.69
5590 6143 2.159128 TCGGTGTCGTGGTTTTAGTTCA 60.159 45.455 0.00 0.00 37.69 3.18
5591 6144 2.472816 TCGGTGTCGTGGTTTTAGTTC 58.527 47.619 0.00 0.00 37.69 3.01
5592 6145 2.600470 TCGGTGTCGTGGTTTTAGTT 57.400 45.000 0.00 0.00 37.69 2.24
5593 6146 2.600470 TTCGGTGTCGTGGTTTTAGT 57.400 45.000 0.00 0.00 37.69 2.24
5594 6147 2.608546 TGTTTCGGTGTCGTGGTTTTAG 59.391 45.455 0.00 0.00 37.69 1.85
5595 6148 2.608546 CTGTTTCGGTGTCGTGGTTTTA 59.391 45.455 0.00 0.00 37.69 1.52
5596 6149 1.399089 CTGTTTCGGTGTCGTGGTTTT 59.601 47.619 0.00 0.00 37.69 2.43
5597 6150 1.011333 CTGTTTCGGTGTCGTGGTTT 58.989 50.000 0.00 0.00 37.69 3.27
5598 6151 0.176219 TCTGTTTCGGTGTCGTGGTT 59.824 50.000 0.00 0.00 37.69 3.67
5599 6152 0.249322 CTCTGTTTCGGTGTCGTGGT 60.249 55.000 0.00 0.00 37.69 4.16
5600 6153 0.944311 CCTCTGTTTCGGTGTCGTGG 60.944 60.000 0.00 0.00 37.69 4.94
5601 6154 0.944311 CCCTCTGTTTCGGTGTCGTG 60.944 60.000 0.00 0.00 37.69 4.35
5602 6155 1.111116 TCCCTCTGTTTCGGTGTCGT 61.111 55.000 0.00 0.00 37.69 4.34
5603 6156 0.666577 GTCCCTCTGTTTCGGTGTCG 60.667 60.000 0.00 0.00 37.82 4.35
5604 6157 0.680061 AGTCCCTCTGTTTCGGTGTC 59.320 55.000 0.00 0.00 0.00 3.67
5605 6158 1.617357 GTAGTCCCTCTGTTTCGGTGT 59.383 52.381 0.00 0.00 0.00 4.16
5606 6159 1.067071 GGTAGTCCCTCTGTTTCGGTG 60.067 57.143 0.00 0.00 0.00 4.94
5607 6160 1.203149 AGGTAGTCCCTCTGTTTCGGT 60.203 52.381 0.00 0.00 40.71 4.69
5608 6161 1.558233 AGGTAGTCCCTCTGTTTCGG 58.442 55.000 0.00 0.00 40.71 4.30
5609 6162 2.688958 CCTAGGTAGTCCCTCTGTTTCG 59.311 54.545 0.00 0.00 44.81 3.46
5610 6163 3.032459 CCCTAGGTAGTCCCTCTGTTTC 58.968 54.545 8.29 0.00 44.81 2.78
5611 6164 2.658489 TCCCTAGGTAGTCCCTCTGTTT 59.342 50.000 8.29 0.00 44.81 2.83
5612 6165 2.245287 CTCCCTAGGTAGTCCCTCTGTT 59.755 54.545 8.29 0.00 44.81 3.16
5613 6166 1.854280 CTCCCTAGGTAGTCCCTCTGT 59.146 57.143 8.29 0.00 44.81 3.41
5614 6167 1.146152 CCTCCCTAGGTAGTCCCTCTG 59.854 61.905 8.29 0.00 44.81 3.35
5615 6168 1.536644 CCTCCCTAGGTAGTCCCTCT 58.463 60.000 8.29 0.00 44.81 3.69
5625 6178 7.737120 TGTTAAAGCAACCAACCTCCCTAGG 62.737 48.000 0.06 0.06 41.68 3.02
5626 6179 2.586648 AAAGCAACCAACCTCCCTAG 57.413 50.000 0.00 0.00 0.00 3.02
5627 6180 3.138653 TGTTAAAGCAACCAACCTCCCTA 59.861 43.478 0.00 0.00 36.20 3.53
5628 6181 2.091555 TGTTAAAGCAACCAACCTCCCT 60.092 45.455 0.00 0.00 36.20 4.20
5629 6182 2.312390 TGTTAAAGCAACCAACCTCCC 58.688 47.619 0.00 0.00 36.20 4.30
5630 6183 3.243737 CCTTGTTAAAGCAACCAACCTCC 60.244 47.826 0.00 0.00 36.20 4.30
5631 6184 3.634910 TCCTTGTTAAAGCAACCAACCTC 59.365 43.478 0.00 0.00 36.20 3.85
5632 6185 3.637769 TCCTTGTTAAAGCAACCAACCT 58.362 40.909 0.00 0.00 36.20 3.50
5633 6186 4.394439 TTCCTTGTTAAAGCAACCAACC 57.606 40.909 0.00 0.00 36.20 3.77
5634 6187 4.266739 CGTTTCCTTGTTAAAGCAACCAAC 59.733 41.667 0.00 0.00 36.20 3.77
5635 6188 4.082136 ACGTTTCCTTGTTAAAGCAACCAA 60.082 37.500 0.00 0.00 36.20 3.67
5636 6189 3.444388 ACGTTTCCTTGTTAAAGCAACCA 59.556 39.130 0.00 0.00 36.20 3.67
5637 6190 4.036567 ACGTTTCCTTGTTAAAGCAACC 57.963 40.909 0.00 0.00 36.20 3.77
5638 6191 4.860352 ACAACGTTTCCTTGTTAAAGCAAC 59.140 37.500 0.00 0.00 37.67 4.17
5639 6192 5.061920 ACAACGTTTCCTTGTTAAAGCAA 57.938 34.783 0.00 0.00 31.51 3.91
5640 6193 4.705337 ACAACGTTTCCTTGTTAAAGCA 57.295 36.364 0.00 0.00 31.51 3.91
5641 6194 5.229260 CAGAACAACGTTTCCTTGTTAAAGC 59.771 40.000 0.00 0.00 41.01 3.51
5642 6195 6.319399 ACAGAACAACGTTTCCTTGTTAAAG 58.681 36.000 0.00 0.00 41.01 1.85
5643 6196 6.256912 ACAGAACAACGTTTCCTTGTTAAA 57.743 33.333 0.00 0.00 41.01 1.52
5644 6197 5.883503 ACAGAACAACGTTTCCTTGTTAA 57.116 34.783 0.00 0.00 41.01 2.01
5645 6198 6.981762 TTACAGAACAACGTTTCCTTGTTA 57.018 33.333 0.00 0.00 41.01 2.41
5646 6199 5.883503 TTACAGAACAACGTTTCCTTGTT 57.116 34.783 0.00 0.00 43.10 2.83
5647 6200 5.732247 GCATTACAGAACAACGTTTCCTTGT 60.732 40.000 0.00 4.33 33.09 3.16
5648 6201 4.675114 GCATTACAGAACAACGTTTCCTTG 59.325 41.667 0.00 0.00 0.00 3.61
5649 6202 4.578928 AGCATTACAGAACAACGTTTCCTT 59.421 37.500 0.00 0.00 0.00 3.36
5650 6203 4.134563 AGCATTACAGAACAACGTTTCCT 58.865 39.130 0.00 0.00 0.00 3.36
5651 6204 4.483476 AGCATTACAGAACAACGTTTCC 57.517 40.909 0.00 0.00 0.00 3.13
5652 6205 5.178809 AGGTAGCATTACAGAACAACGTTTC 59.821 40.000 0.00 0.00 0.00 2.78
5653 6206 5.061179 AGGTAGCATTACAGAACAACGTTT 58.939 37.500 0.00 0.00 0.00 3.60
5654 6207 4.638304 AGGTAGCATTACAGAACAACGTT 58.362 39.130 0.00 0.00 0.00 3.99
5655 6208 4.267349 AGGTAGCATTACAGAACAACGT 57.733 40.909 0.00 0.00 0.00 3.99
5656 6209 4.201589 CGAAGGTAGCATTACAGAACAACG 60.202 45.833 0.00 0.00 0.00 4.10
5657 6210 5.204673 CGAAGGTAGCATTACAGAACAAC 57.795 43.478 0.00 0.00 0.00 3.32
5675 6228 3.001330 GCGACATCTTTTATGGACCGAAG 59.999 47.826 0.00 0.00 0.00 3.79
5676 6229 2.933906 GCGACATCTTTTATGGACCGAA 59.066 45.455 0.00 0.00 0.00 4.30
5677 6230 2.546778 GCGACATCTTTTATGGACCGA 58.453 47.619 0.00 0.00 0.00 4.69
5678 6231 1.257936 CGCGACATCTTTTATGGACCG 59.742 52.381 0.00 0.00 0.00 4.79
5679 6232 1.597663 CCGCGACATCTTTTATGGACC 59.402 52.381 8.23 0.00 0.00 4.46
5680 6233 1.003866 GCCGCGACATCTTTTATGGAC 60.004 52.381 8.23 0.00 0.00 4.02
5681 6234 1.134521 AGCCGCGACATCTTTTATGGA 60.135 47.619 8.23 0.00 0.00 3.41
5682 6235 1.299541 AGCCGCGACATCTTTTATGG 58.700 50.000 8.23 0.00 0.00 2.74
5683 6236 3.123804 ACTAGCCGCGACATCTTTTATG 58.876 45.455 8.23 0.00 0.00 1.90
5684 6237 3.454371 ACTAGCCGCGACATCTTTTAT 57.546 42.857 8.23 0.00 0.00 1.40
5685 6238 2.953466 ACTAGCCGCGACATCTTTTA 57.047 45.000 8.23 0.00 0.00 1.52
5686 6239 2.000447 GAACTAGCCGCGACATCTTTT 59.000 47.619 8.23 0.00 0.00 2.27
5687 6240 1.067142 TGAACTAGCCGCGACATCTTT 60.067 47.619 8.23 0.00 0.00 2.52
5688 6241 0.530744 TGAACTAGCCGCGACATCTT 59.469 50.000 8.23 0.00 0.00 2.40
5689 6242 0.530744 TTGAACTAGCCGCGACATCT 59.469 50.000 8.23 1.10 0.00 2.90
5690 6243 1.355971 TTTGAACTAGCCGCGACATC 58.644 50.000 8.23 0.00 0.00 3.06
5691 6244 1.463444 GTTTTGAACTAGCCGCGACAT 59.537 47.619 8.23 0.00 0.00 3.06
5692 6245 0.863144 GTTTTGAACTAGCCGCGACA 59.137 50.000 8.23 0.00 0.00 4.35
5693 6246 1.136336 CAGTTTTGAACTAGCCGCGAC 60.136 52.381 8.23 0.00 40.46 5.19
5694 6247 1.144969 CAGTTTTGAACTAGCCGCGA 58.855 50.000 8.23 0.00 40.46 5.87
5695 6248 0.452784 GCAGTTTTGAACTAGCCGCG 60.453 55.000 0.00 0.00 40.46 6.46
5696 6249 0.452784 CGCAGTTTTGAACTAGCCGC 60.453 55.000 0.00 0.00 40.46 6.53
5697 6250 1.144969 TCGCAGTTTTGAACTAGCCG 58.855 50.000 0.00 0.00 40.46 5.52
5698 6251 2.729156 GCATCGCAGTTTTGAACTAGCC 60.729 50.000 0.00 0.00 40.46 3.93
5699 6252 2.160417 AGCATCGCAGTTTTGAACTAGC 59.840 45.455 0.00 0.36 40.46 3.42
5700 6253 4.410492 AAGCATCGCAGTTTTGAACTAG 57.590 40.909 0.00 0.00 40.46 2.57
5701 6254 6.494893 AATAAGCATCGCAGTTTTGAACTA 57.505 33.333 0.00 0.00 40.46 2.24
5702 6255 5.376854 AATAAGCATCGCAGTTTTGAACT 57.623 34.783 0.00 0.00 44.06 3.01
5703 6256 6.143758 TCAAAATAAGCATCGCAGTTTTGAAC 59.856 34.615 16.55 0.00 39.63 3.18
5704 6257 6.212235 TCAAAATAAGCATCGCAGTTTTGAA 58.788 32.000 16.55 7.17 39.63 2.69
5705 6258 5.767269 TCAAAATAAGCATCGCAGTTTTGA 58.233 33.333 15.65 15.65 39.93 2.69
5706 6259 6.450845 TTCAAAATAAGCATCGCAGTTTTG 57.549 33.333 12.92 12.92 37.54 2.44
5707 6260 6.867816 TGATTCAAAATAAGCATCGCAGTTTT 59.132 30.769 0.00 0.00 0.00 2.43
5708 6261 6.389091 TGATTCAAAATAAGCATCGCAGTTT 58.611 32.000 0.00 0.00 0.00 2.66
5709 6262 5.953183 TGATTCAAAATAAGCATCGCAGTT 58.047 33.333 0.00 0.00 0.00 3.16
5710 6263 5.355071 TCTGATTCAAAATAAGCATCGCAGT 59.645 36.000 0.00 0.00 0.00 4.40
5711 6264 5.813717 TCTGATTCAAAATAAGCATCGCAG 58.186 37.500 0.00 0.00 0.00 5.18
5712 6265 5.220912 CCTCTGATTCAAAATAAGCATCGCA 60.221 40.000 0.00 0.00 0.00 5.10
5713 6266 5.210715 CCTCTGATTCAAAATAAGCATCGC 58.789 41.667 0.00 0.00 0.00 4.58
5714 6267 5.528690 TCCCTCTGATTCAAAATAAGCATCG 59.471 40.000 0.00 0.00 0.00 3.84
5715 6268 6.545298 ACTCCCTCTGATTCAAAATAAGCATC 59.455 38.462 0.00 0.00 0.00 3.91
5716 6269 6.430007 ACTCCCTCTGATTCAAAATAAGCAT 58.570 36.000 0.00 0.00 0.00 3.79
5717 6270 5.819991 ACTCCCTCTGATTCAAAATAAGCA 58.180 37.500 0.00 0.00 0.00 3.91
5718 6271 7.051000 AGTACTCCCTCTGATTCAAAATAAGC 58.949 38.462 0.00 0.00 0.00 3.09
5722 6275 9.807921 TTTTAAGTACTCCCTCTGATTCAAAAT 57.192 29.630 0.00 0.00 0.00 1.82
5723 6276 9.635404 TTTTTAAGTACTCCCTCTGATTCAAAA 57.365 29.630 0.00 0.00 0.00 2.44
5724 6277 9.063615 GTTTTTAAGTACTCCCTCTGATTCAAA 57.936 33.333 0.00 0.00 0.00 2.69
5725 6278 8.437575 AGTTTTTAAGTACTCCCTCTGATTCAA 58.562 33.333 0.00 0.00 0.00 2.69
5726 6279 7.974504 AGTTTTTAAGTACTCCCTCTGATTCA 58.025 34.615 0.00 0.00 0.00 2.57
5727 6280 8.722394 CAAGTTTTTAAGTACTCCCTCTGATTC 58.278 37.037 0.00 0.00 0.00 2.52
5728 6281 8.218488 ACAAGTTTTTAAGTACTCCCTCTGATT 58.782 33.333 0.00 0.00 0.00 2.57
5729 6282 7.661847 CACAAGTTTTTAAGTACTCCCTCTGAT 59.338 37.037 0.00 0.00 0.00 2.90
5730 6283 6.990349 CACAAGTTTTTAAGTACTCCCTCTGA 59.010 38.462 0.00 0.00 0.00 3.27
5731 6284 6.293462 GCACAAGTTTTTAAGTACTCCCTCTG 60.293 42.308 0.00 0.00 0.00 3.35
5732 6285 5.763698 GCACAAGTTTTTAAGTACTCCCTCT 59.236 40.000 0.00 0.00 0.00 3.69
5733 6286 5.529800 TGCACAAGTTTTTAAGTACTCCCTC 59.470 40.000 0.00 0.00 0.00 4.30
5734 6287 5.298527 GTGCACAAGTTTTTAAGTACTCCCT 59.701 40.000 13.17 0.00 0.00 4.20
5735 6288 5.506815 GGTGCACAAGTTTTTAAGTACTCCC 60.507 44.000 20.43 0.00 0.00 4.30
5736 6289 5.298527 AGGTGCACAAGTTTTTAAGTACTCC 59.701 40.000 20.43 0.00 0.00 3.85
5737 6290 6.373186 AGGTGCACAAGTTTTTAAGTACTC 57.627 37.500 20.43 0.00 0.00 2.59
5738 6291 7.277396 TCTAGGTGCACAAGTTTTTAAGTACT 58.723 34.615 20.43 3.47 0.00 2.73
5739 6292 7.307811 CCTCTAGGTGCACAAGTTTTTAAGTAC 60.308 40.741 20.43 0.00 0.00 2.73
5740 6293 6.708949 CCTCTAGGTGCACAAGTTTTTAAGTA 59.291 38.462 20.43 0.00 0.00 2.24
5741 6294 5.531287 CCTCTAGGTGCACAAGTTTTTAAGT 59.469 40.000 20.43 0.00 0.00 2.24
5742 6295 5.562890 GCCTCTAGGTGCACAAGTTTTTAAG 60.563 44.000 20.43 7.27 37.57 1.85
5743 6296 4.277423 GCCTCTAGGTGCACAAGTTTTTAA 59.723 41.667 20.43 0.00 37.57 1.52
5744 6297 3.818773 GCCTCTAGGTGCACAAGTTTTTA 59.181 43.478 20.43 0.00 37.57 1.52
5745 6298 2.623416 GCCTCTAGGTGCACAAGTTTTT 59.377 45.455 20.43 0.00 37.57 1.94
5746 6299 2.158608 AGCCTCTAGGTGCACAAGTTTT 60.159 45.455 20.43 0.00 37.57 2.43
5747 6300 1.421646 AGCCTCTAGGTGCACAAGTTT 59.578 47.619 20.43 0.76 37.57 2.66
5748 6301 1.059913 AGCCTCTAGGTGCACAAGTT 58.940 50.000 20.43 3.39 37.57 2.66
5749 6302 1.827969 CTAGCCTCTAGGTGCACAAGT 59.172 52.381 20.43 4.93 37.57 3.16
5750 6303 1.137872 CCTAGCCTCTAGGTGCACAAG 59.862 57.143 20.43 15.22 37.57 3.16
5751 6304 1.195115 CCTAGCCTCTAGGTGCACAA 58.805 55.000 20.43 4.96 37.57 3.33
5752 6305 0.041238 ACCTAGCCTCTAGGTGCACA 59.959 55.000 21.12 0.00 45.56 4.57
5753 6306 2.903404 ACCTAGCCTCTAGGTGCAC 58.097 57.895 21.12 8.80 45.56 4.57
5758 6311 4.342665 CCTTTTACTCACCTAGCCTCTAGG 59.657 50.000 16.18 16.18 40.49 3.02
5759 6312 4.202172 GCCTTTTACTCACCTAGCCTCTAG 60.202 50.000 0.00 0.00 0.00 2.43
5760 6313 3.705072 GCCTTTTACTCACCTAGCCTCTA 59.295 47.826 0.00 0.00 0.00 2.43
5761 6314 2.502130 GCCTTTTACTCACCTAGCCTCT 59.498 50.000 0.00 0.00 0.00 3.69
5762 6315 2.420269 GGCCTTTTACTCACCTAGCCTC 60.420 54.545 0.00 0.00 36.22 4.70
5763 6316 1.560146 GGCCTTTTACTCACCTAGCCT 59.440 52.381 0.00 0.00 36.22 4.58
5764 6317 1.280998 TGGCCTTTTACTCACCTAGCC 59.719 52.381 3.32 0.00 39.64 3.93
5765 6318 2.027100 ACTGGCCTTTTACTCACCTAGC 60.027 50.000 3.32 0.00 0.00 3.42
5766 6319 3.983044 ACTGGCCTTTTACTCACCTAG 57.017 47.619 3.32 0.00 0.00 3.02
5768 6321 3.983044 CTACTGGCCTTTTACTCACCT 57.017 47.619 3.32 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.