Multiple sequence alignment - TraesCS4B01G217100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G217100 chr4B 100.000 3348 0 0 1 3348 457769210 457772557 0.000000e+00 6183.0
1 TraesCS4B01G217100 chr4B 93.525 278 17 1 2655 2931 233235710 233235987 2.400000e-111 412.0
2 TraesCS4B01G217100 chr4B 92.308 65 5 0 1361 1425 29674437 29674373 3.560000e-15 93.5
3 TraesCS4B01G217100 chr4D 92.628 2184 66 40 525 2658 372512843 372514981 0.000000e+00 3053.0
4 TraesCS4B01G217100 chr4D 92.488 426 28 1 2927 3348 372514977 372515402 1.030000e-169 606.0
5 TraesCS4B01G217100 chr4D 100.000 111 0 0 1 111 372512738 372512848 4.380000e-49 206.0
6 TraesCS4B01G217100 chr4A 93.467 1592 45 23 1082 2634 91754643 91753072 0.000000e+00 2309.0
7 TraesCS4B01G217100 chr4A 89.882 425 38 3 2927 3347 91753063 91752640 2.940000e-150 542.0
8 TraesCS4B01G217100 chr4A 83.600 500 28 24 541 999 91755150 91754664 1.440000e-113 420.0
9 TraesCS4B01G217100 chr4A 93.913 115 3 1 1 111 91755264 91755150 1.600000e-38 171.0
10 TraesCS4B01G217100 chr3B 97.257 401 11 0 111 511 661839604 661840004 0.000000e+00 680.0
11 TraesCS4B01G217100 chr3B 96.500 400 14 0 112 511 151518429 151518828 0.000000e+00 662.0
12 TraesCS4B01G217100 chr3B 93.863 277 15 2 2657 2931 607429512 607429236 1.860000e-112 416.0
13 TraesCS4B01G217100 chr7B 96.750 400 13 0 111 510 600428007 600428406 0.000000e+00 667.0
14 TraesCS4B01G217100 chr7B 96.750 400 12 1 112 510 60348903 60348504 0.000000e+00 665.0
15 TraesCS4B01G217100 chr6B 96.725 397 13 0 110 506 12525265 12525661 0.000000e+00 662.0
16 TraesCS4B01G217100 chr6B 96.491 399 14 0 111 509 425699473 425699075 0.000000e+00 660.0
17 TraesCS4B01G217100 chr6B 93.885 278 16 1 2654 2930 134106924 134106647 5.170000e-113 418.0
18 TraesCS4B01G217100 chr5B 96.491 399 14 0 108 506 495482477 495482875 0.000000e+00 660.0
19 TraesCS4B01G217100 chr5B 93.548 279 16 2 2654 2930 684919063 684919341 6.680000e-112 414.0
20 TraesCS4B01G217100 chr2B 96.482 398 14 0 109 506 668224802 668225199 0.000000e+00 658.0
21 TraesCS4B01G217100 chr2B 95.366 410 19 0 103 512 146952787 146953196 0.000000e+00 652.0
22 TraesCS4B01G217100 chr7D 94.872 273 13 1 2657 2928 282878384 282878112 3.090000e-115 425.0
23 TraesCS4B01G217100 chr5A 93.594 281 16 2 2657 2935 632012709 632012429 5.170000e-113 418.0
24 TraesCS4B01G217100 chr2D 93.594 281 15 3 2653 2931 304329532 304329253 1.860000e-112 416.0
25 TraesCS4B01G217100 chr2A 93.863 277 15 2 2655 2930 674059759 674059484 1.860000e-112 416.0
26 TraesCS4B01G217100 chr3A 93.548 279 17 1 2653 2930 568030125 568030403 6.680000e-112 414.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G217100 chr4B 457769210 457772557 3347 False 6183.000000 6183 100.000000 1 3348 1 chr4B.!!$F2 3347
1 TraesCS4B01G217100 chr4D 372512738 372515402 2664 False 1288.333333 3053 95.038667 1 3348 3 chr4D.!!$F1 3347
2 TraesCS4B01G217100 chr4A 91752640 91755264 2624 True 860.500000 2309 90.215500 1 3347 4 chr4A.!!$R1 3346

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
445 450 0.036765 AAGGTCAGCCGCGTGAAATA 60.037 50.000 4.92 0.00 40.50 1.40 F
514 519 0.110147 TTGTCAAATTTACCGCGGCG 60.110 50.000 28.58 16.78 0.00 6.46 F
643 675 0.478507 CCTCTCCCTCCCTCTCTCTC 59.521 65.000 0.00 0.00 0.00 3.20 F
656 688 1.138859 TCTCTCTCTCTCTCTCGGCAG 59.861 57.143 0.00 0.00 0.00 4.85 F
1727 1803 0.601558 CGAGGACGAGGGAAAGAACA 59.398 55.000 0.00 0.00 42.66 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1712 1788 0.511653 GCGTTGTTCTTTCCCTCGTC 59.488 55.0 0.00 0.0 0.00 4.20 R
1715 1791 0.536460 TGGGCGTTGTTCTTTCCCTC 60.536 55.0 0.00 0.0 37.83 4.30 R
1716 1792 0.537371 CTGGGCGTTGTTCTTTCCCT 60.537 55.0 0.00 0.0 37.83 4.20 R
1940 2016 1.178276 GTGTCACTGATCTCGGAGGT 58.822 55.0 4.96 0.0 0.00 3.85 R
3282 3407 0.535102 CCCTTGGTCTTGTTGCGACT 60.535 55.0 5.50 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 123 4.740822 AGCGGCGGAGGGCAAATT 62.741 61.111 9.78 0.00 46.16 1.82
119 124 3.758931 GCGGCGGAGGGCAAATTT 61.759 61.111 9.78 0.00 46.16 1.82
120 125 2.181525 CGGCGGAGGGCAAATTTG 59.818 61.111 14.03 14.03 46.16 2.32
121 126 2.339556 CGGCGGAGGGCAAATTTGA 61.340 57.895 22.31 0.00 46.16 2.69
122 127 1.215382 GGCGGAGGGCAAATTTGAC 59.785 57.895 22.31 19.34 46.16 3.18
123 128 1.531739 GGCGGAGGGCAAATTTGACA 61.532 55.000 25.05 0.00 46.16 3.58
124 129 0.316841 GCGGAGGGCAAATTTGACAA 59.683 50.000 25.05 0.00 42.87 3.18
125 130 1.270041 GCGGAGGGCAAATTTGACAAA 60.270 47.619 25.05 2.48 42.87 2.83
126 131 2.612721 GCGGAGGGCAAATTTGACAAAT 60.613 45.455 25.05 10.62 42.87 2.32
127 132 3.663025 CGGAGGGCAAATTTGACAAATT 58.337 40.909 25.05 18.41 42.62 1.82
129 134 5.233988 CGGAGGGCAAATTTGACAAATTTA 58.766 37.500 29.34 0.00 46.34 1.40
130 135 5.698545 CGGAGGGCAAATTTGACAAATTTAA 59.301 36.000 29.34 0.00 46.34 1.52
131 136 6.347321 CGGAGGGCAAATTTGACAAATTTAAC 60.347 38.462 29.34 24.33 46.34 2.01
132 137 6.072728 GGAGGGCAAATTTGACAAATTTAACC 60.073 38.462 29.34 29.36 46.34 2.85
133 138 6.600388 AGGGCAAATTTGACAAATTTAACCT 58.400 32.000 31.35 31.35 46.34 3.50
134 139 7.740805 AGGGCAAATTTGACAAATTTAACCTA 58.259 30.769 33.31 6.20 46.34 3.08
135 140 8.382405 AGGGCAAATTTGACAAATTTAACCTAT 58.618 29.630 33.31 25.52 46.34 2.57
136 141 9.660180 GGGCAAATTTGACAAATTTAACCTATA 57.340 29.630 31.84 4.60 46.34 1.31
162 167 9.003658 AGACGAAATTAAATCACAGAATGAACT 57.996 29.630 0.00 0.00 41.93 3.01
163 168 8.955061 ACGAAATTAAATCACAGAATGAACTG 57.045 30.769 0.00 0.00 41.93 3.16
171 176 3.469008 ACAGAATGAACTGTCCGTGAA 57.531 42.857 0.00 0.00 46.36 3.18
172 177 3.804036 ACAGAATGAACTGTCCGTGAAA 58.196 40.909 0.00 0.00 46.36 2.69
173 178 4.389374 ACAGAATGAACTGTCCGTGAAAT 58.611 39.130 0.00 0.00 46.36 2.17
174 179 4.821805 ACAGAATGAACTGTCCGTGAAATT 59.178 37.500 0.00 0.00 46.36 1.82
175 180 5.995282 ACAGAATGAACTGTCCGTGAAATTA 59.005 36.000 0.00 0.00 46.36 1.40
176 181 6.655003 ACAGAATGAACTGTCCGTGAAATTAT 59.345 34.615 0.00 0.00 46.36 1.28
177 182 7.174946 ACAGAATGAACTGTCCGTGAAATTATT 59.825 33.333 0.00 0.00 46.36 1.40
178 183 8.023128 CAGAATGAACTGTCCGTGAAATTATTT 58.977 33.333 0.00 0.00 39.69 1.40
179 184 8.237267 AGAATGAACTGTCCGTGAAATTATTTC 58.763 33.333 10.47 10.47 40.08 2.17
180 185 6.869315 TGAACTGTCCGTGAAATTATTTCA 57.131 33.333 15.46 15.46 46.68 2.69
191 196 5.392286 TGAAATTATTTCACGCGGTTTACC 58.608 37.500 15.46 0.00 44.21 2.85
192 197 4.359971 AATTATTTCACGCGGTTTACCC 57.640 40.909 12.47 0.00 0.00 3.69
201 206 4.710167 GGTTTACCCGTGGCGCCT 62.710 66.667 29.70 9.54 0.00 5.52
202 207 2.265424 GTTTACCCGTGGCGCCTA 59.735 61.111 29.70 11.59 0.00 3.93
203 208 1.812507 GTTTACCCGTGGCGCCTAG 60.813 63.158 29.70 20.71 0.00 3.02
216 221 2.416678 CCTAGCTCTCAGGCGCTG 59.583 66.667 7.64 3.67 37.05 5.18
217 222 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
218 223 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
219 224 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
220 225 4.756458 GCTCTCAGGCGCTGCACT 62.756 66.667 7.64 0.00 0.00 4.40
221 226 2.888111 CTCTCAGGCGCTGCACTA 59.112 61.111 7.64 0.00 0.00 2.74
222 227 1.226916 CTCTCAGGCGCTGCACTAG 60.227 63.158 7.64 0.00 0.00 2.57
223 228 1.943116 CTCTCAGGCGCTGCACTAGT 61.943 60.000 7.64 0.00 0.00 2.57
224 229 1.808799 CTCAGGCGCTGCACTAGTG 60.809 63.158 18.93 18.93 39.95 2.74
234 239 3.118454 CACTAGTGCAACGCCCGG 61.118 66.667 10.54 0.00 45.86 5.73
235 240 4.388499 ACTAGTGCAACGCCCGGG 62.388 66.667 19.09 19.09 45.86 5.73
236 241 4.077184 CTAGTGCAACGCCCGGGA 62.077 66.667 29.31 0.00 45.86 5.14
237 242 4.077184 TAGTGCAACGCCCGGGAG 62.077 66.667 29.31 26.57 45.86 4.30
242 247 4.530857 CAACGCCCGGGAGCTAGG 62.531 72.222 29.31 7.74 0.00 3.02
254 259 2.496817 GCTAGGCGCTGCACTAGT 59.503 61.111 21.78 0.00 39.07 2.57
255 260 1.880340 GCTAGGCGCTGCACTAGTG 60.880 63.158 18.93 18.93 39.07 2.74
266 271 3.050703 CACTAGTGCAACGCCTAGG 57.949 57.895 10.54 3.67 45.86 3.02
267 272 0.530744 CACTAGTGCAACGCCTAGGA 59.469 55.000 14.75 0.00 45.86 2.94
268 273 0.818296 ACTAGTGCAACGCCTAGGAG 59.182 55.000 14.75 12.99 45.86 3.69
269 274 0.528684 CTAGTGCAACGCCTAGGAGC 60.529 60.000 14.75 10.85 45.86 4.70
270 275 0.970937 TAGTGCAACGCCTAGGAGCT 60.971 55.000 14.75 3.79 45.86 4.09
271 276 0.970937 AGTGCAACGCCTAGGAGCTA 60.971 55.000 14.75 0.00 45.86 3.32
272 277 0.528684 GTGCAACGCCTAGGAGCTAG 60.529 60.000 14.75 3.92 34.16 3.42
288 293 3.637998 GCTAGGCGCTACACTGTATAA 57.362 47.619 7.64 0.00 35.14 0.98
289 294 4.175787 GCTAGGCGCTACACTGTATAAT 57.824 45.455 7.64 0.00 35.14 1.28
290 295 3.921021 GCTAGGCGCTACACTGTATAATG 59.079 47.826 7.64 0.00 35.14 1.90
291 296 4.558898 GCTAGGCGCTACACTGTATAATGT 60.559 45.833 7.64 0.00 35.14 2.71
292 297 3.717707 AGGCGCTACACTGTATAATGTG 58.282 45.455 7.64 5.21 39.80 3.21
293 298 2.800544 GGCGCTACACTGTATAATGTGG 59.199 50.000 7.64 2.83 38.39 4.17
294 299 2.221055 GCGCTACACTGTATAATGTGGC 59.779 50.000 0.00 0.00 46.47 5.01
296 301 2.221055 GCTACACTGTATAATGTGGCGC 59.779 50.000 0.00 0.00 42.36 6.53
297 302 1.663695 ACACTGTATAATGTGGCGCC 58.336 50.000 22.73 22.73 38.39 6.53
298 303 1.209504 ACACTGTATAATGTGGCGCCT 59.790 47.619 29.70 9.99 38.39 5.52
299 304 2.432874 ACACTGTATAATGTGGCGCCTA 59.567 45.455 29.70 17.50 38.39 3.93
300 305 3.059884 CACTGTATAATGTGGCGCCTAG 58.940 50.000 29.70 13.13 0.00 3.02
313 318 2.416678 CCTAGCTCTCAGGCGCTG 59.583 66.667 7.64 3.67 37.05 5.18
314 319 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
315 320 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
316 321 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
318 323 3.117171 CTCTCAGGCGCTGCACAC 61.117 66.667 7.64 0.00 0.00 3.82
319 324 4.687215 TCTCAGGCGCTGCACACC 62.687 66.667 7.64 0.00 0.00 4.16
320 325 4.994471 CTCAGGCGCTGCACACCA 62.994 66.667 7.64 0.00 0.00 4.17
323 328 4.569180 AGGCGCTGCACACCACTT 62.569 61.111 7.64 0.00 0.00 3.16
324 329 2.668212 GGCGCTGCACACCACTTA 60.668 61.111 7.64 0.00 0.00 2.24
325 330 2.680913 GGCGCTGCACACCACTTAG 61.681 63.158 7.64 0.00 0.00 2.18
326 331 1.961277 GCGCTGCACACCACTTAGT 60.961 57.895 0.00 0.00 0.00 2.24
327 332 0.669318 GCGCTGCACACCACTTAGTA 60.669 55.000 0.00 0.00 0.00 1.82
328 333 1.790755 CGCTGCACACCACTTAGTAA 58.209 50.000 0.00 0.00 0.00 2.24
329 334 2.346803 CGCTGCACACCACTTAGTAAT 58.653 47.619 0.00 0.00 0.00 1.89
330 335 2.742053 CGCTGCACACCACTTAGTAATT 59.258 45.455 0.00 0.00 0.00 1.40
331 336 3.188460 CGCTGCACACCACTTAGTAATTT 59.812 43.478 0.00 0.00 0.00 1.82
332 337 4.320202 CGCTGCACACCACTTAGTAATTTT 60.320 41.667 0.00 0.00 0.00 1.82
333 338 5.154222 GCTGCACACCACTTAGTAATTTTC 58.846 41.667 0.00 0.00 0.00 2.29
334 339 5.048713 GCTGCACACCACTTAGTAATTTTCT 60.049 40.000 0.00 0.00 0.00 2.52
335 340 6.312399 TGCACACCACTTAGTAATTTTCTG 57.688 37.500 0.00 0.00 0.00 3.02
336 341 6.058833 TGCACACCACTTAGTAATTTTCTGA 58.941 36.000 0.00 0.00 0.00 3.27
337 342 6.714810 TGCACACCACTTAGTAATTTTCTGAT 59.285 34.615 0.00 0.00 0.00 2.90
338 343 7.094805 TGCACACCACTTAGTAATTTTCTGATC 60.095 37.037 0.00 0.00 0.00 2.92
339 344 7.094805 GCACACCACTTAGTAATTTTCTGATCA 60.095 37.037 0.00 0.00 0.00 2.92
340 345 8.950210 CACACCACTTAGTAATTTTCTGATCAT 58.050 33.333 0.00 0.00 0.00 2.45
343 348 9.314321 ACCACTTAGTAATTTTCTGATCATACG 57.686 33.333 0.00 0.00 0.00 3.06
344 349 9.314321 CCACTTAGTAATTTTCTGATCATACGT 57.686 33.333 0.00 0.00 0.00 3.57
346 351 9.871238 ACTTAGTAATTTTCTGATCATACGTGT 57.129 29.630 0.00 0.00 0.00 4.49
348 353 7.005062 AGTAATTTTCTGATCATACGTGTGC 57.995 36.000 7.52 0.00 0.00 4.57
349 354 3.989705 TTTTCTGATCATACGTGTGCG 57.010 42.857 7.52 0.00 44.93 5.34
350 355 2.931512 TTCTGATCATACGTGTGCGA 57.068 45.000 7.52 0.00 42.00 5.10
351 356 2.188837 TCTGATCATACGTGTGCGAC 57.811 50.000 7.52 2.31 42.00 5.19
370 375 3.833645 CTGGCCGTGTAGCGCCTA 61.834 66.667 2.29 0.00 39.71 3.93
371 376 3.151710 TGGCCGTGTAGCGCCTAT 61.152 61.111 2.29 0.00 39.71 2.57
372 377 2.355956 GGCCGTGTAGCGCCTATC 60.356 66.667 2.29 0.00 39.71 2.08
373 378 2.728817 GCCGTGTAGCGCCTATCT 59.271 61.111 2.29 0.00 39.71 1.98
374 379 1.371881 GCCGTGTAGCGCCTATCTC 60.372 63.158 2.29 0.00 39.71 2.75
375 380 1.797211 GCCGTGTAGCGCCTATCTCT 61.797 60.000 2.29 0.00 39.71 3.10
376 381 1.520494 CCGTGTAGCGCCTATCTCTA 58.480 55.000 2.29 0.00 39.71 2.43
377 382 1.878088 CCGTGTAGCGCCTATCTCTAA 59.122 52.381 2.29 0.00 39.71 2.10
378 383 2.095668 CCGTGTAGCGCCTATCTCTAAG 60.096 54.545 2.29 0.00 39.71 2.18
379 384 2.095668 CGTGTAGCGCCTATCTCTAAGG 60.096 54.545 2.29 0.00 37.17 2.69
380 385 2.885894 GTGTAGCGCCTATCTCTAAGGT 59.114 50.000 2.29 0.00 36.43 3.50
381 386 2.885266 TGTAGCGCCTATCTCTAAGGTG 59.115 50.000 2.29 0.00 45.62 4.00
382 387 2.074729 AGCGCCTATCTCTAAGGTGT 57.925 50.000 2.29 0.00 44.83 4.16
383 388 2.389715 AGCGCCTATCTCTAAGGTGTT 58.610 47.619 2.29 0.00 44.83 3.32
384 389 2.101582 AGCGCCTATCTCTAAGGTGTTG 59.898 50.000 2.29 0.00 44.83 3.33
385 390 2.474816 CGCCTATCTCTAAGGTGTTGC 58.525 52.381 0.00 0.00 39.36 4.17
386 391 2.159099 CGCCTATCTCTAAGGTGTTGCA 60.159 50.000 0.00 0.00 39.36 4.08
387 392 3.198872 GCCTATCTCTAAGGTGTTGCAC 58.801 50.000 0.00 0.00 36.43 4.57
388 393 3.369471 GCCTATCTCTAAGGTGTTGCACA 60.369 47.826 1.61 0.00 35.86 4.57
389 394 4.437239 CCTATCTCTAAGGTGTTGCACAG 58.563 47.826 1.61 0.00 35.86 3.66
390 395 4.081420 CCTATCTCTAAGGTGTTGCACAGT 60.081 45.833 1.61 0.00 35.86 3.55
391 396 3.111853 TCTCTAAGGTGTTGCACAGTG 57.888 47.619 0.00 0.00 35.86 3.66
392 397 2.434336 TCTCTAAGGTGTTGCACAGTGT 59.566 45.455 1.61 0.00 35.86 3.55
393 398 3.639561 TCTCTAAGGTGTTGCACAGTGTA 59.360 43.478 1.61 0.00 35.86 2.90
394 399 3.990092 TCTAAGGTGTTGCACAGTGTAG 58.010 45.455 1.61 0.00 35.86 2.74
395 400 2.710096 AAGGTGTTGCACAGTGTAGT 57.290 45.000 1.61 0.00 35.86 2.73
396 401 1.953559 AGGTGTTGCACAGTGTAGTG 58.046 50.000 1.61 0.00 42.37 2.74
397 402 1.209504 AGGTGTTGCACAGTGTAGTGT 59.790 47.619 1.61 0.00 41.52 3.55
399 404 1.330521 GTGTTGCACAGTGTAGTGTGG 59.669 52.381 18.52 4.17 46.73 4.17
400 405 0.307760 GTTGCACAGTGTAGTGTGGC 59.692 55.000 18.52 12.34 46.73 5.01
401 406 1.157257 TTGCACAGTGTAGTGTGGCG 61.157 55.000 18.52 0.00 46.73 5.69
402 407 2.954753 GCACAGTGTAGTGTGGCGC 61.955 63.158 18.52 0.00 46.73 6.53
403 408 2.030562 ACAGTGTAGTGTGGCGCC 59.969 61.111 22.73 22.73 0.00 6.53
404 409 2.343758 CAGTGTAGTGTGGCGCCT 59.656 61.111 29.70 9.99 0.00 5.52
405 410 1.301716 CAGTGTAGTGTGGCGCCTT 60.302 57.895 29.70 13.03 0.00 4.35
406 411 1.004918 AGTGTAGTGTGGCGCCTTC 60.005 57.895 29.70 20.58 0.00 3.46
407 412 2.048597 TGTAGTGTGGCGCCTTCG 60.049 61.111 29.70 0.00 39.07 3.79
408 413 2.048503 GTAGTGTGGCGCCTTCGT 60.049 61.111 29.70 12.53 38.14 3.85
409 414 2.048597 TAGTGTGGCGCCTTCGTG 60.049 61.111 29.70 0.00 38.14 4.35
410 415 3.583276 TAGTGTGGCGCCTTCGTGG 62.583 63.158 29.70 0.00 38.14 4.94
425 430 2.187163 TGGCGGACGTCACACAAA 59.813 55.556 18.91 0.00 0.00 2.83
426 431 1.449778 TGGCGGACGTCACACAAAA 60.450 52.632 18.91 0.00 0.00 2.44
427 432 1.025113 TGGCGGACGTCACACAAAAA 61.025 50.000 18.91 0.00 0.00 1.94
428 433 0.316689 GGCGGACGTCACACAAAAAG 60.317 55.000 18.91 0.00 0.00 2.27
429 434 0.316689 GCGGACGTCACACAAAAAGG 60.317 55.000 18.91 0.00 0.00 3.11
430 435 1.011333 CGGACGTCACACAAAAAGGT 58.989 50.000 18.91 0.00 0.00 3.50
431 436 1.004292 CGGACGTCACACAAAAAGGTC 60.004 52.381 18.91 0.00 0.00 3.85
432 437 2.011222 GGACGTCACACAAAAAGGTCA 58.989 47.619 18.91 0.00 31.25 4.02
433 438 2.031683 GGACGTCACACAAAAAGGTCAG 59.968 50.000 18.91 0.00 31.25 3.51
434 439 1.400494 ACGTCACACAAAAAGGTCAGC 59.600 47.619 0.00 0.00 0.00 4.26
435 440 1.268539 CGTCACACAAAAAGGTCAGCC 60.269 52.381 0.00 0.00 0.00 4.85
436 441 1.021202 TCACACAAAAAGGTCAGCCG 58.979 50.000 0.00 0.00 40.50 5.52
437 442 0.594796 CACACAAAAAGGTCAGCCGC 60.595 55.000 0.00 0.00 40.50 6.53
438 443 1.370414 CACAAAAAGGTCAGCCGCG 60.370 57.895 0.00 0.00 40.50 6.46
439 444 1.822186 ACAAAAAGGTCAGCCGCGT 60.822 52.632 4.92 0.00 40.50 6.01
440 445 1.370414 CAAAAAGGTCAGCCGCGTG 60.370 57.895 4.92 0.00 40.50 5.34
441 446 1.525077 AAAAAGGTCAGCCGCGTGA 60.525 52.632 4.92 0.00 40.50 4.35
442 447 1.098712 AAAAAGGTCAGCCGCGTGAA 61.099 50.000 4.92 0.00 40.50 3.18
443 448 1.098712 AAAAGGTCAGCCGCGTGAAA 61.099 50.000 4.92 0.00 40.50 2.69
444 449 0.889186 AAAGGTCAGCCGCGTGAAAT 60.889 50.000 4.92 0.00 40.50 2.17
445 450 0.036765 AAGGTCAGCCGCGTGAAATA 60.037 50.000 4.92 0.00 40.50 1.40
446 451 0.460284 AGGTCAGCCGCGTGAAATAG 60.460 55.000 4.92 0.00 40.50 1.73
447 452 0.739813 GGTCAGCCGCGTGAAATAGT 60.740 55.000 4.92 0.00 0.00 2.12
448 453 1.076332 GTCAGCCGCGTGAAATAGTT 58.924 50.000 4.92 0.00 0.00 2.24
449 454 1.463444 GTCAGCCGCGTGAAATAGTTT 59.537 47.619 4.92 0.00 0.00 2.66
450 455 1.730064 TCAGCCGCGTGAAATAGTTTC 59.270 47.619 4.92 0.00 40.08 2.78
451 456 1.463056 CAGCCGCGTGAAATAGTTTCA 59.537 47.619 4.92 1.24 46.68 2.69
464 469 8.786826 TGAAATAGTTTCACGGATAGTTCATT 57.213 30.769 1.24 0.00 44.21 2.57
465 470 8.879759 TGAAATAGTTTCACGGATAGTTCATTC 58.120 33.333 1.24 0.00 44.21 2.67
466 471 9.099454 GAAATAGTTTCACGGATAGTTCATTCT 57.901 33.333 0.00 0.00 39.45 2.40
469 474 9.698309 ATAGTTTCACGGATAGTTCATTCTATG 57.302 33.333 0.00 0.00 31.71 2.23
470 475 7.782049 AGTTTCACGGATAGTTCATTCTATGA 58.218 34.615 0.00 0.00 37.55 2.15
471 476 8.424918 AGTTTCACGGATAGTTCATTCTATGAT 58.575 33.333 0.00 0.00 39.39 2.45
472 477 9.046296 GTTTCACGGATAGTTCATTCTATGATT 57.954 33.333 0.00 0.00 39.39 2.57
473 478 9.613428 TTTCACGGATAGTTCATTCTATGATTT 57.387 29.630 0.00 0.00 39.39 2.17
474 479 8.593492 TCACGGATAGTTCATTCTATGATTTG 57.407 34.615 0.00 0.00 39.39 2.32
475 480 8.421002 TCACGGATAGTTCATTCTATGATTTGA 58.579 33.333 0.00 0.00 39.39 2.69
476 481 9.212641 CACGGATAGTTCATTCTATGATTTGAT 57.787 33.333 0.00 0.00 39.39 2.57
477 482 9.784531 ACGGATAGTTCATTCTATGATTTGATT 57.215 29.630 0.00 0.00 39.39 2.57
483 488 9.388506 AGTTCATTCTATGATTTGATTTCGTCT 57.611 29.630 0.00 0.00 39.39 4.18
510 515 7.581011 AGATCAAATTTGTCAAATTTACCGC 57.419 32.000 27.66 19.16 46.34 5.68
511 516 5.814314 TCAAATTTGTCAAATTTACCGCG 57.186 34.783 27.66 18.38 46.34 6.46
512 517 4.681942 TCAAATTTGTCAAATTTACCGCGG 59.318 37.500 27.66 26.86 46.34 6.46
513 518 2.053282 TTTGTCAAATTTACCGCGGC 57.947 45.000 28.58 5.76 0.00 6.53
514 519 0.110147 TTGTCAAATTTACCGCGGCG 60.110 50.000 28.58 16.78 0.00 6.46
515 520 1.229315 TGTCAAATTTACCGCGGCGT 61.229 50.000 28.58 9.80 0.00 5.68
516 521 0.720590 GTCAAATTTACCGCGGCGTA 59.279 50.000 28.58 8.52 0.00 4.42
517 522 1.000884 TCAAATTTACCGCGGCGTAG 58.999 50.000 28.58 9.18 0.00 3.51
591 596 2.036217 TCCGGTTTCTTATCGTGTGTGT 59.964 45.455 0.00 0.00 0.00 3.72
636 668 3.773154 GAGCCCCTCTCCCTCCCT 61.773 72.222 0.00 0.00 35.77 4.20
637 669 3.767044 GAGCCCCTCTCCCTCCCTC 62.767 73.684 0.00 0.00 35.77 4.30
638 670 3.773154 GCCCCTCTCCCTCCCTCT 61.773 72.222 0.00 0.00 0.00 3.69
639 671 2.612251 CCCCTCTCCCTCCCTCTC 59.388 72.222 0.00 0.00 0.00 3.20
640 672 2.018086 CCCCTCTCCCTCCCTCTCT 61.018 68.421 0.00 0.00 0.00 3.10
641 673 1.541672 CCCTCTCCCTCCCTCTCTC 59.458 68.421 0.00 0.00 0.00 3.20
642 674 0.998945 CCCTCTCCCTCCCTCTCTCT 60.999 65.000 0.00 0.00 0.00 3.10
643 675 0.478507 CCTCTCCCTCCCTCTCTCTC 59.521 65.000 0.00 0.00 0.00 3.20
644 676 1.522900 CTCTCCCTCCCTCTCTCTCT 58.477 60.000 0.00 0.00 0.00 3.10
645 677 1.421646 CTCTCCCTCCCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
656 688 1.138859 TCTCTCTCTCTCTCTCGGCAG 59.861 57.143 0.00 0.00 0.00 4.85
721 757 4.751098 CGTTAGAGTCTACCGAGCTTATCT 59.249 45.833 11.35 0.00 0.00 1.98
723 759 3.746940 AGAGTCTACCGAGCTTATCTCC 58.253 50.000 0.00 0.00 38.62 3.71
732 768 2.792947 GCTTATCTCCCCGCCGTCA 61.793 63.158 0.00 0.00 0.00 4.35
878 937 2.092212 CCTGCTTCCTCTCTCTCTCTCT 60.092 54.545 0.00 0.00 0.00 3.10
879 938 3.209410 CTGCTTCCTCTCTCTCTCTCTC 58.791 54.545 0.00 0.00 0.00 3.20
880 939 2.846206 TGCTTCCTCTCTCTCTCTCTCT 59.154 50.000 0.00 0.00 0.00 3.10
881 940 3.118261 TGCTTCCTCTCTCTCTCTCTCTC 60.118 52.174 0.00 0.00 0.00 3.20
882 941 3.135530 GCTTCCTCTCTCTCTCTCTCTCT 59.864 52.174 0.00 0.00 0.00 3.10
883 942 4.742138 GCTTCCTCTCTCTCTCTCTCTCTC 60.742 54.167 0.00 0.00 0.00 3.20
884 943 4.271807 TCCTCTCTCTCTCTCTCTCTCT 57.728 50.000 0.00 0.00 0.00 3.10
885 944 4.219115 TCCTCTCTCTCTCTCTCTCTCTC 58.781 52.174 0.00 0.00 0.00 3.20
886 945 4.078922 TCCTCTCTCTCTCTCTCTCTCTCT 60.079 50.000 0.00 0.00 0.00 3.10
887 946 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
888 947 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
889 948 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
890 949 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
891 950 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
918 982 4.173924 GCCTGCTCTGCTCTCCCC 62.174 72.222 0.00 0.00 0.00 4.81
925 989 2.935481 CTGCTCTCCCCAACCCCA 60.935 66.667 0.00 0.00 0.00 4.96
989 1053 2.764925 CGCACGTACTCTTCACGCG 61.765 63.158 3.53 3.53 43.10 6.01
1020 1084 3.543665 ACTCCGACCTACTACAAGCTAG 58.456 50.000 0.00 0.00 0.00 3.42
1064 1128 2.227149 CGTGGTACTGTACTACTGTGCA 59.773 50.000 25.35 9.13 37.93 4.57
1432 1505 4.208686 GGCTTCTCCGACGCCGAT 62.209 66.667 0.00 0.00 37.24 4.18
1433 1506 2.956964 GCTTCTCCGACGCCGATG 60.957 66.667 0.00 0.00 38.22 3.84
1434 1507 2.278857 CTTCTCCGACGCCGATGG 60.279 66.667 0.00 0.00 38.22 3.51
1720 1796 2.271497 GAGGACGAGGACGAGGGA 59.729 66.667 0.00 0.00 42.66 4.20
1727 1803 0.601558 CGAGGACGAGGGAAAGAACA 59.398 55.000 0.00 0.00 42.66 3.18
1757 1833 4.478371 CCGATCAGCAGCAGGCCA 62.478 66.667 5.01 0.00 46.50 5.36
1765 1841 2.979676 CAGCAGGCCAACGAGCAA 60.980 61.111 5.01 0.00 0.00 3.91
1786 1862 2.902846 CGCGAGGAGGAGGACGAT 60.903 66.667 0.00 0.00 0.00 3.73
1879 1955 2.591429 CAGGCGCACAACAGTGGA 60.591 61.111 10.83 0.00 33.85 4.02
1953 2029 1.468224 CGTCAACACCTCCGAGATCAG 60.468 57.143 0.00 0.00 0.00 2.90
2635 2756 2.307686 TCCTTCTAAACCGGCCTGAATT 59.692 45.455 0.00 0.00 0.00 2.17
2638 2759 1.631388 TCTAAACCGGCCTGAATTGGA 59.369 47.619 0.00 0.48 0.00 3.53
2650 2771 2.943033 CTGAATTGGATGTACCGAACCC 59.057 50.000 0.00 0.00 42.61 4.11
2658 2779 3.528532 GATGTACCGAACCCAACTAAGG 58.471 50.000 0.00 0.00 0.00 2.69
2667 2788 2.799126 CCCAACTAAGGGCATGTACA 57.201 50.000 0.00 0.00 43.10 2.90
2668 2789 3.080300 CCCAACTAAGGGCATGTACAA 57.920 47.619 0.00 0.00 43.10 2.41
2669 2790 3.631250 CCCAACTAAGGGCATGTACAAT 58.369 45.455 0.00 0.00 43.10 2.71
2670 2791 3.381272 CCCAACTAAGGGCATGTACAATG 59.619 47.826 0.00 0.12 43.10 2.82
2671 2792 3.381272 CCAACTAAGGGCATGTACAATGG 59.619 47.826 0.00 0.00 0.00 3.16
2672 2793 4.016444 CAACTAAGGGCATGTACAATGGT 58.984 43.478 0.00 0.00 0.00 3.55
2673 2794 4.316025 ACTAAGGGCATGTACAATGGTT 57.684 40.909 0.00 0.00 0.00 3.67
2674 2795 4.016444 ACTAAGGGCATGTACAATGGTTG 58.984 43.478 0.00 0.00 0.00 3.77
2675 2796 2.897271 AGGGCATGTACAATGGTTGA 57.103 45.000 0.00 0.00 0.00 3.18
2676 2797 3.386932 AGGGCATGTACAATGGTTGAT 57.613 42.857 0.00 0.00 0.00 2.57
2677 2798 4.518278 AGGGCATGTACAATGGTTGATA 57.482 40.909 0.00 0.00 0.00 2.15
2678 2799 4.865905 AGGGCATGTACAATGGTTGATAA 58.134 39.130 0.00 0.00 0.00 1.75
2679 2800 4.889409 AGGGCATGTACAATGGTTGATAAG 59.111 41.667 0.00 0.00 0.00 1.73
2680 2801 4.887071 GGGCATGTACAATGGTTGATAAGA 59.113 41.667 0.00 0.00 0.00 2.10
2681 2802 5.536161 GGGCATGTACAATGGTTGATAAGAT 59.464 40.000 0.00 0.00 0.00 2.40
2682 2803 6.714810 GGGCATGTACAATGGTTGATAAGATA 59.285 38.462 0.00 0.00 0.00 1.98
2683 2804 7.394359 GGGCATGTACAATGGTTGATAAGATAT 59.606 37.037 0.00 0.00 0.00 1.63
2684 2805 8.796475 GGCATGTACAATGGTTGATAAGATATT 58.204 33.333 0.00 0.00 0.00 1.28
2685 2806 9.831737 GCATGTACAATGGTTGATAAGATATTC 57.168 33.333 0.00 0.00 0.00 1.75
2719 2840 8.430801 AGTCTTGCATGTAATTTAGAGATGAC 57.569 34.615 0.00 0.00 0.00 3.06
2720 2841 8.043113 AGTCTTGCATGTAATTTAGAGATGACA 58.957 33.333 0.00 0.00 0.00 3.58
2721 2842 8.668353 GTCTTGCATGTAATTTAGAGATGACAA 58.332 33.333 0.00 0.00 0.00 3.18
2722 2843 9.230122 TCTTGCATGTAATTTAGAGATGACAAA 57.770 29.630 0.00 0.00 0.00 2.83
2723 2844 9.844790 CTTGCATGTAATTTAGAGATGACAAAA 57.155 29.630 0.00 0.00 0.00 2.44
2724 2845 9.844790 TTGCATGTAATTTAGAGATGACAAAAG 57.155 29.630 0.00 0.00 0.00 2.27
2725 2846 9.230122 TGCATGTAATTTAGAGATGACAAAAGA 57.770 29.630 0.00 0.00 0.00 2.52
2742 2863 9.778741 TGACAAAAGATATGTCTATAATGGGTC 57.221 33.333 8.01 0.00 45.81 4.46
2743 2864 9.778741 GACAAAAGATATGTCTATAATGGGTCA 57.221 33.333 0.00 0.00 43.03 4.02
2748 2869 9.781425 AAGATATGTCTATAATGGGTCATCTCT 57.219 33.333 0.00 0.00 33.30 3.10
2749 2870 9.781425 AGATATGTCTATAATGGGTCATCTCTT 57.219 33.333 0.00 0.00 31.36 2.85
2752 2873 7.233389 TGTCTATAATGGGTCATCTCTTAGC 57.767 40.000 0.00 0.00 0.00 3.09
2753 2874 6.211584 TGTCTATAATGGGTCATCTCTTAGCC 59.788 42.308 0.00 0.00 0.00 3.93
2754 2875 6.439058 GTCTATAATGGGTCATCTCTTAGCCT 59.561 42.308 0.00 0.00 34.30 4.58
2755 2876 7.019388 TCTATAATGGGTCATCTCTTAGCCTT 58.981 38.462 0.00 0.00 34.30 4.35
2756 2877 8.177456 TCTATAATGGGTCATCTCTTAGCCTTA 58.823 37.037 0.00 0.00 34.30 2.69
2757 2878 7.821134 ATAATGGGTCATCTCTTAGCCTTAT 57.179 36.000 0.00 0.00 34.30 1.73
2758 2879 5.753721 ATGGGTCATCTCTTAGCCTTATC 57.246 43.478 0.00 0.00 34.30 1.75
2759 2880 4.820775 TGGGTCATCTCTTAGCCTTATCT 58.179 43.478 0.00 0.00 34.30 1.98
2760 2881 5.219739 TGGGTCATCTCTTAGCCTTATCTT 58.780 41.667 0.00 0.00 34.30 2.40
2761 2882 5.305644 TGGGTCATCTCTTAGCCTTATCTTC 59.694 44.000 0.00 0.00 34.30 2.87
2762 2883 5.305644 GGGTCATCTCTTAGCCTTATCTTCA 59.694 44.000 0.00 0.00 0.00 3.02
2763 2884 6.183361 GGGTCATCTCTTAGCCTTATCTTCAA 60.183 42.308 0.00 0.00 0.00 2.69
2764 2885 7.449247 GGTCATCTCTTAGCCTTATCTTCAAT 58.551 38.462 0.00 0.00 0.00 2.57
2765 2886 8.589338 GGTCATCTCTTAGCCTTATCTTCAATA 58.411 37.037 0.00 0.00 0.00 1.90
2766 2887 9.988815 GTCATCTCTTAGCCTTATCTTCAATAA 57.011 33.333 0.00 0.00 0.00 1.40
2767 2888 9.988815 TCATCTCTTAGCCTTATCTTCAATAAC 57.011 33.333 0.00 0.00 0.00 1.89
2768 2889 9.995003 CATCTCTTAGCCTTATCTTCAATAACT 57.005 33.333 0.00 0.00 0.00 2.24
2795 2916 7.789273 TTATTTCTAAAAACGTGGTGAGACA 57.211 32.000 0.00 0.00 0.00 3.41
2796 2917 6.877611 ATTTCTAAAAACGTGGTGAGACAT 57.122 33.333 0.00 0.00 0.00 3.06
2797 2918 7.972832 ATTTCTAAAAACGTGGTGAGACATA 57.027 32.000 0.00 0.00 0.00 2.29
2798 2919 7.972832 TTTCTAAAAACGTGGTGAGACATAT 57.027 32.000 0.00 0.00 0.00 1.78
2799 2920 7.972832 TTCTAAAAACGTGGTGAGACATATT 57.027 32.000 0.00 0.00 0.00 1.28
2800 2921 7.359262 TCTAAAAACGTGGTGAGACATATTG 57.641 36.000 0.00 0.00 0.00 1.90
2801 2922 6.932400 TCTAAAAACGTGGTGAGACATATTGT 59.068 34.615 0.00 0.00 0.00 2.71
2802 2923 5.356882 AAAACGTGGTGAGACATATTGTG 57.643 39.130 0.00 0.00 0.00 3.33
2803 2924 2.346803 ACGTGGTGAGACATATTGTGC 58.653 47.619 0.00 0.00 0.00 4.57
2804 2925 2.028112 ACGTGGTGAGACATATTGTGCT 60.028 45.455 0.00 0.00 0.00 4.40
2805 2926 3.194755 ACGTGGTGAGACATATTGTGCTA 59.805 43.478 0.00 0.00 0.00 3.49
2806 2927 4.180817 CGTGGTGAGACATATTGTGCTAA 58.819 43.478 0.00 0.00 0.00 3.09
2807 2928 4.268644 CGTGGTGAGACATATTGTGCTAAG 59.731 45.833 0.00 0.00 0.00 2.18
2808 2929 5.419542 GTGGTGAGACATATTGTGCTAAGA 58.580 41.667 0.00 0.00 0.00 2.10
2809 2930 5.521735 GTGGTGAGACATATTGTGCTAAGAG 59.478 44.000 0.00 0.00 0.00 2.85
2810 2931 5.422012 TGGTGAGACATATTGTGCTAAGAGA 59.578 40.000 0.00 0.00 0.00 3.10
2811 2932 6.098838 TGGTGAGACATATTGTGCTAAGAGAT 59.901 38.462 0.00 0.00 0.00 2.75
2812 2933 6.644592 GGTGAGACATATTGTGCTAAGAGATC 59.355 42.308 0.00 0.00 0.00 2.75
2813 2934 7.205992 GTGAGACATATTGTGCTAAGAGATCA 58.794 38.462 0.00 0.00 0.00 2.92
2814 2935 7.871973 GTGAGACATATTGTGCTAAGAGATCAT 59.128 37.037 0.00 0.00 0.00 2.45
2815 2936 8.087136 TGAGACATATTGTGCTAAGAGATCATC 58.913 37.037 0.00 0.00 0.00 2.92
2816 2937 8.192743 AGACATATTGTGCTAAGAGATCATCT 57.807 34.615 0.00 0.00 41.27 2.90
2817 2938 8.306038 AGACATATTGTGCTAAGAGATCATCTC 58.694 37.037 6.55 6.55 43.70 2.75
2852 2973 9.574516 TCTTAAATAAGAGAAGACAAGCCTTTT 57.425 29.630 0.00 0.00 37.40 2.27
2853 2974 9.833182 CTTAAATAAGAGAAGACAAGCCTTTTC 57.167 33.333 0.00 0.00 35.33 2.29
2854 2975 9.574516 TTAAATAAGAGAAGACAAGCCTTTTCT 57.425 29.630 0.00 0.00 38.69 2.52
2855 2976 8.470657 AAATAAGAGAAGACAAGCCTTTTCTT 57.529 30.769 5.57 5.57 44.56 2.52
2856 2977 9.574516 AAATAAGAGAAGACAAGCCTTTTCTTA 57.425 29.630 5.86 14.67 45.53 2.10
2858 2979 7.446001 AAGAGAAGACAAGCCTTTTCTTATG 57.554 36.000 5.29 0.00 42.29 1.90
2859 2980 6.773638 AGAGAAGACAAGCCTTTTCTTATGA 58.226 36.000 5.29 0.00 35.01 2.15
2860 2981 7.401246 AGAGAAGACAAGCCTTTTCTTATGAT 58.599 34.615 5.29 0.00 35.01 2.45
2861 2982 7.887495 AGAGAAGACAAGCCTTTTCTTATGATT 59.113 33.333 5.29 0.00 35.01 2.57
2862 2983 8.049655 AGAAGACAAGCCTTTTCTTATGATTC 57.950 34.615 5.86 0.00 29.54 2.52
2863 2984 7.887495 AGAAGACAAGCCTTTTCTTATGATTCT 59.113 33.333 5.86 0.00 29.54 2.40
2864 2985 7.622893 AGACAAGCCTTTTCTTATGATTCTC 57.377 36.000 0.00 0.00 0.00 2.87
2865 2986 7.401246 AGACAAGCCTTTTCTTATGATTCTCT 58.599 34.615 0.00 0.00 0.00 3.10
2866 2987 7.552330 AGACAAGCCTTTTCTTATGATTCTCTC 59.448 37.037 0.00 0.00 0.00 3.20
2867 2988 7.401246 ACAAGCCTTTTCTTATGATTCTCTCT 58.599 34.615 0.00 0.00 0.00 3.10
2868 2989 7.552330 ACAAGCCTTTTCTTATGATTCTCTCTC 59.448 37.037 0.00 0.00 0.00 3.20
2869 2990 6.591001 AGCCTTTTCTTATGATTCTCTCTCC 58.409 40.000 0.00 0.00 0.00 3.71
2870 2991 6.386635 AGCCTTTTCTTATGATTCTCTCTCCT 59.613 38.462 0.00 0.00 0.00 3.69
2871 2992 7.053498 GCCTTTTCTTATGATTCTCTCTCCTT 58.947 38.462 0.00 0.00 0.00 3.36
2872 2993 7.226523 GCCTTTTCTTATGATTCTCTCTCCTTC 59.773 40.741 0.00 0.00 0.00 3.46
2873 2994 8.263640 CCTTTTCTTATGATTCTCTCTCCTTCA 58.736 37.037 0.00 0.00 0.00 3.02
2874 2995 9.097257 CTTTTCTTATGATTCTCTCTCCTTCAC 57.903 37.037 0.00 0.00 0.00 3.18
2875 2996 6.723298 TCTTATGATTCTCTCTCCTTCACC 57.277 41.667 0.00 0.00 0.00 4.02
2876 2997 6.439487 TCTTATGATTCTCTCTCCTTCACCT 58.561 40.000 0.00 0.00 0.00 4.00
2877 2998 6.549364 TCTTATGATTCTCTCTCCTTCACCTC 59.451 42.308 0.00 0.00 0.00 3.85
2878 2999 4.053009 TGATTCTCTCTCCTTCACCTCA 57.947 45.455 0.00 0.00 0.00 3.86
2879 3000 4.618635 TGATTCTCTCTCCTTCACCTCAT 58.381 43.478 0.00 0.00 0.00 2.90
2880 3001 5.028802 TGATTCTCTCTCCTTCACCTCATT 58.971 41.667 0.00 0.00 0.00 2.57
2881 3002 6.197903 TGATTCTCTCTCCTTCACCTCATTA 58.802 40.000 0.00 0.00 0.00 1.90
2882 3003 6.843333 TGATTCTCTCTCCTTCACCTCATTAT 59.157 38.462 0.00 0.00 0.00 1.28
2883 3004 7.346698 TGATTCTCTCTCCTTCACCTCATTATT 59.653 37.037 0.00 0.00 0.00 1.40
2884 3005 7.502060 TTCTCTCTCCTTCACCTCATTATTT 57.498 36.000 0.00 0.00 0.00 1.40
2885 3006 8.609617 TTCTCTCTCCTTCACCTCATTATTTA 57.390 34.615 0.00 0.00 0.00 1.40
2886 3007 8.789767 TCTCTCTCCTTCACCTCATTATTTAT 57.210 34.615 0.00 0.00 0.00 1.40
2887 3008 8.865090 TCTCTCTCCTTCACCTCATTATTTATC 58.135 37.037 0.00 0.00 0.00 1.75
2888 3009 7.967908 TCTCTCCTTCACCTCATTATTTATCC 58.032 38.462 0.00 0.00 0.00 2.59
2889 3010 7.791766 TCTCTCCTTCACCTCATTATTTATCCT 59.208 37.037 0.00 0.00 0.00 3.24
2890 3011 9.094578 CTCTCCTTCACCTCATTATTTATCCTA 57.905 37.037 0.00 0.00 0.00 2.94
2891 3012 8.871125 TCTCCTTCACCTCATTATTTATCCTAC 58.129 37.037 0.00 0.00 0.00 3.18
2892 3013 7.667557 TCCTTCACCTCATTATTTATCCTACG 58.332 38.462 0.00 0.00 0.00 3.51
2893 3014 7.289317 TCCTTCACCTCATTATTTATCCTACGT 59.711 37.037 0.00 0.00 0.00 3.57
2894 3015 7.385205 CCTTCACCTCATTATTTATCCTACGTG 59.615 40.741 0.00 0.00 0.00 4.49
2895 3016 6.755206 TCACCTCATTATTTATCCTACGTGG 58.245 40.000 0.00 0.00 37.10 4.94
2896 3017 5.408604 CACCTCATTATTTATCCTACGTGGC 59.591 44.000 0.00 0.00 35.26 5.01
2897 3018 5.071250 ACCTCATTATTTATCCTACGTGGCA 59.929 40.000 0.00 0.00 35.26 4.92
2898 3019 6.173339 CCTCATTATTTATCCTACGTGGCAT 58.827 40.000 0.00 0.00 35.26 4.40
2899 3020 6.655003 CCTCATTATTTATCCTACGTGGCATT 59.345 38.462 0.00 0.00 35.26 3.56
2900 3021 7.148407 CCTCATTATTTATCCTACGTGGCATTC 60.148 40.741 0.00 0.00 35.26 2.67
2901 3022 6.653320 TCATTATTTATCCTACGTGGCATTCC 59.347 38.462 0.00 0.00 35.26 3.01
2902 3023 4.706842 ATTTATCCTACGTGGCATTCCT 57.293 40.909 0.00 0.00 35.26 3.36
2903 3024 5.818678 ATTTATCCTACGTGGCATTCCTA 57.181 39.130 0.00 0.00 35.26 2.94
2904 3025 5.617528 TTTATCCTACGTGGCATTCCTAA 57.382 39.130 0.00 0.00 35.26 2.69
2905 3026 3.753294 ATCCTACGTGGCATTCCTAAG 57.247 47.619 0.00 0.00 35.26 2.18
2906 3027 2.742348 TCCTACGTGGCATTCCTAAGA 58.258 47.619 0.00 0.00 35.26 2.10
2907 3028 3.305720 TCCTACGTGGCATTCCTAAGAT 58.694 45.455 0.00 0.00 35.26 2.40
2908 3029 4.476297 TCCTACGTGGCATTCCTAAGATA 58.524 43.478 0.00 0.00 35.26 1.98
2909 3030 4.523173 TCCTACGTGGCATTCCTAAGATAG 59.477 45.833 0.00 0.00 35.26 2.08
2910 3031 3.113260 ACGTGGCATTCCTAAGATAGC 57.887 47.619 0.00 0.00 0.00 2.97
2911 3032 2.434336 ACGTGGCATTCCTAAGATAGCA 59.566 45.455 0.00 0.00 0.00 3.49
2912 3033 2.802816 CGTGGCATTCCTAAGATAGCAC 59.197 50.000 0.00 0.00 0.00 4.40
2913 3034 3.142174 GTGGCATTCCTAAGATAGCACC 58.858 50.000 0.00 0.00 0.00 5.01
2914 3035 2.777114 TGGCATTCCTAAGATAGCACCA 59.223 45.455 0.00 0.00 0.00 4.17
2915 3036 3.395607 TGGCATTCCTAAGATAGCACCAT 59.604 43.478 0.00 0.00 0.00 3.55
2916 3037 4.141181 TGGCATTCCTAAGATAGCACCATT 60.141 41.667 0.00 0.00 0.00 3.16
2917 3038 4.217118 GGCATTCCTAAGATAGCACCATTG 59.783 45.833 0.00 0.00 0.00 2.82
2918 3039 4.823989 GCATTCCTAAGATAGCACCATTGT 59.176 41.667 0.00 0.00 0.00 2.71
2919 3040 5.997746 GCATTCCTAAGATAGCACCATTGTA 59.002 40.000 0.00 0.00 0.00 2.41
2920 3041 6.073003 GCATTCCTAAGATAGCACCATTGTAC 60.073 42.308 0.00 0.00 0.00 2.90
2921 3042 6.553953 TTCCTAAGATAGCACCATTGTACA 57.446 37.500 0.00 0.00 0.00 2.90
2922 3043 6.747414 TCCTAAGATAGCACCATTGTACAT 57.253 37.500 0.00 0.00 0.00 2.29
2923 3044 6.524734 TCCTAAGATAGCACCATTGTACATG 58.475 40.000 0.00 0.00 0.00 3.21
2924 3045 6.099701 TCCTAAGATAGCACCATTGTACATGT 59.900 38.462 2.69 2.69 0.00 3.21
2925 3046 6.425114 CCTAAGATAGCACCATTGTACATGTC 59.575 42.308 0.00 0.00 0.00 3.06
2926 3047 4.708177 AGATAGCACCATTGTACATGTCC 58.292 43.478 0.00 0.00 0.00 4.02
2927 3048 4.410228 AGATAGCACCATTGTACATGTCCT 59.590 41.667 0.00 0.00 0.00 3.85
2928 3049 5.602561 AGATAGCACCATTGTACATGTCCTA 59.397 40.000 0.00 0.00 0.00 2.94
2929 3050 4.568072 AGCACCATTGTACATGTCCTAA 57.432 40.909 0.00 0.00 0.00 2.69
2930 3051 4.517285 AGCACCATTGTACATGTCCTAAG 58.483 43.478 0.00 0.00 0.00 2.18
2979 3100 1.101331 GATAGGGAACACGACTCGGT 58.899 55.000 2.98 0.00 0.00 4.69
2990 3111 1.203994 ACGACTCGGTGTTGGAATAGG 59.796 52.381 2.98 0.00 34.36 2.57
2996 3117 1.271707 CGGTGTTGGAATAGGTTGGGT 60.272 52.381 0.00 0.00 0.00 4.51
3025 3146 2.552802 CAAGCAGTCTTGGGCTCTG 58.447 57.895 0.00 0.00 44.53 3.35
3029 3154 0.250467 GCAGTCTTGGGCTCTGTCAA 60.250 55.000 0.00 0.00 0.00 3.18
3031 3156 2.787994 CAGTCTTGGGCTCTGTCAATT 58.212 47.619 0.00 0.00 0.00 2.32
3047 3172 7.712797 TCTGTCAATTAGGAGAAAACCAAAAC 58.287 34.615 0.00 0.00 0.00 2.43
3065 3190 8.477419 ACCAAAACCTCTTCATTCTTTCATAA 57.523 30.769 0.00 0.00 0.00 1.90
3110 3235 6.888088 GCAGGGTTTAGGTAAGAAATAAAGGA 59.112 38.462 0.00 0.00 0.00 3.36
3120 3245 3.963129 AGAAATAAAGGATGCCGGTGAA 58.037 40.909 1.90 0.00 0.00 3.18
3124 3249 2.463589 AAAGGATGCCGGTGAAGCGA 62.464 55.000 1.90 0.00 0.00 4.93
3158 3283 3.367703 GGTCATTGAGTTGATGCCAAAGG 60.368 47.826 0.00 0.00 33.49 3.11
3165 3290 1.963515 GTTGATGCCAAAGGAGTGGTT 59.036 47.619 0.00 0.00 41.12 3.67
3200 3325 3.209410 CTGCCTAATCACCTGTCATTCC 58.791 50.000 0.00 0.00 0.00 3.01
3268 3393 2.832129 TCTTAGATCTTTCTGCGGGTGT 59.168 45.455 0.00 0.00 33.17 4.16
3282 3407 0.621609 GGGTGTGGTTGGGTATGCTA 59.378 55.000 0.00 0.00 0.00 3.49
3304 3429 1.662044 GCAACAAGACCAAGGGCAG 59.338 57.895 0.00 0.00 0.00 4.85
3341 3466 4.013728 AGTGTGTTCACAAGGCTAACAAA 58.986 39.130 7.22 0.00 46.01 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
136 141 9.003658 AGTTCATTCTGTGATTTAATTTCGTCT 57.996 29.630 0.00 0.00 36.54 4.18
137 142 9.055248 CAGTTCATTCTGTGATTTAATTTCGTC 57.945 33.333 0.00 0.00 36.54 4.20
138 143 8.567948 ACAGTTCATTCTGTGATTTAATTTCGT 58.432 29.630 0.00 0.00 45.40 3.85
139 144 8.955061 ACAGTTCATTCTGTGATTTAATTTCG 57.045 30.769 0.00 0.00 45.40 3.46
140 145 9.346725 GGACAGTTCATTCTGTGATTTAATTTC 57.653 33.333 4.06 0.00 46.81 2.17
141 146 8.023128 CGGACAGTTCATTCTGTGATTTAATTT 58.977 33.333 4.06 0.00 46.81 1.82
142 147 7.174946 ACGGACAGTTCATTCTGTGATTTAATT 59.825 33.333 4.06 0.00 46.81 1.40
143 148 6.655003 ACGGACAGTTCATTCTGTGATTTAAT 59.345 34.615 4.06 0.00 46.81 1.40
144 149 5.995282 ACGGACAGTTCATTCTGTGATTTAA 59.005 36.000 4.06 0.00 46.81 1.52
145 150 5.547465 ACGGACAGTTCATTCTGTGATTTA 58.453 37.500 4.06 0.00 46.81 1.40
146 151 4.389374 ACGGACAGTTCATTCTGTGATTT 58.611 39.130 4.06 0.00 46.81 2.17
147 152 4.008074 ACGGACAGTTCATTCTGTGATT 57.992 40.909 4.06 0.00 46.81 2.57
148 153 3.685139 ACGGACAGTTCATTCTGTGAT 57.315 42.857 4.06 0.00 46.81 3.06
150 155 2.754472 TCACGGACAGTTCATTCTGTG 58.246 47.619 4.06 4.48 46.81 3.66
152 157 5.362556 AATTTCACGGACAGTTCATTCTG 57.637 39.130 0.00 0.00 40.80 3.02
153 158 7.687941 AATAATTTCACGGACAGTTCATTCT 57.312 32.000 0.00 0.00 0.00 2.40
154 159 8.020819 TGAAATAATTTCACGGACAGTTCATTC 58.979 33.333 0.00 0.00 44.21 2.67
155 160 7.881142 TGAAATAATTTCACGGACAGTTCATT 58.119 30.769 0.00 0.00 44.21 2.57
156 161 7.447374 TGAAATAATTTCACGGACAGTTCAT 57.553 32.000 0.00 0.00 44.21 2.57
157 162 6.869315 TGAAATAATTTCACGGACAGTTCA 57.131 33.333 0.00 0.00 44.21 3.18
168 173 5.392286 GGTAAACCGCGTGAAATAATTTCA 58.608 37.500 4.92 0.00 46.68 2.69
169 174 4.794762 GGGTAAACCGCGTGAAATAATTTC 59.205 41.667 4.92 0.00 37.23 2.17
170 175 4.735985 GGGTAAACCGCGTGAAATAATTT 58.264 39.130 4.92 0.00 36.71 1.82
171 176 4.359971 GGGTAAACCGCGTGAAATAATT 57.640 40.909 4.92 0.00 36.71 1.40
184 189 3.313713 TAGGCGCCACGGGTAAACC 62.314 63.158 31.54 0.00 0.00 3.27
185 190 1.812507 CTAGGCGCCACGGGTAAAC 60.813 63.158 31.54 0.00 0.00 2.01
186 191 2.580276 CTAGGCGCCACGGGTAAA 59.420 61.111 31.54 1.85 0.00 2.01
187 192 4.151582 GCTAGGCGCCACGGGTAA 62.152 66.667 31.54 3.37 0.00 2.85
191 196 4.577246 GAGAGCTAGGCGCCACGG 62.577 72.222 31.54 18.60 40.39 4.94
192 197 3.764810 CTGAGAGCTAGGCGCCACG 62.765 68.421 31.54 19.97 40.39 4.94
193 198 2.105930 CTGAGAGCTAGGCGCCAC 59.894 66.667 31.54 17.93 40.39 5.01
194 199 3.150335 CCTGAGAGCTAGGCGCCA 61.150 66.667 31.54 14.00 40.39 5.69
203 208 3.362399 TAGTGCAGCGCCTGAGAGC 62.362 63.158 2.29 0.00 39.42 4.09
204 209 1.226916 CTAGTGCAGCGCCTGAGAG 60.227 63.158 2.29 0.00 32.44 3.20
205 210 1.979155 ACTAGTGCAGCGCCTGAGA 60.979 57.895 2.29 0.00 32.44 3.27
206 211 1.808799 CACTAGTGCAGCGCCTGAG 60.809 63.158 10.54 0.34 32.44 3.35
207 212 2.262603 CACTAGTGCAGCGCCTGA 59.737 61.111 10.54 0.00 32.44 3.86
217 222 3.118454 CCGGGCGTTGCACTAGTG 61.118 66.667 18.93 18.93 0.00 2.74
218 223 4.388499 CCCGGGCGTTGCACTAGT 62.388 66.667 8.08 0.00 0.00 2.57
219 224 4.077184 TCCCGGGCGTTGCACTAG 62.077 66.667 18.49 0.00 0.00 2.57
220 225 4.077184 CTCCCGGGCGTTGCACTA 62.077 66.667 18.49 0.00 0.00 2.74
225 230 4.530857 CCTAGCTCCCGGGCGTTG 62.531 72.222 18.49 6.95 37.29 4.10
238 243 4.409342 CACTAGTGCAGCGCCTAG 57.591 61.111 10.54 14.52 36.35 3.02
248 253 0.530744 TCCTAGGCGTTGCACTAGTG 59.469 55.000 18.93 18.93 35.93 2.74
249 254 0.818296 CTCCTAGGCGTTGCACTAGT 59.182 55.000 2.96 0.00 35.93 2.57
250 255 0.528684 GCTCCTAGGCGTTGCACTAG 60.529 60.000 2.96 2.78 37.12 2.57
251 256 0.970937 AGCTCCTAGGCGTTGCACTA 60.971 55.000 2.96 0.00 37.29 2.74
252 257 0.970937 TAGCTCCTAGGCGTTGCACT 60.971 55.000 2.96 0.00 37.29 4.40
253 258 0.528684 CTAGCTCCTAGGCGTTGCAC 60.529 60.000 2.96 0.00 37.29 4.57
254 259 1.676678 CCTAGCTCCTAGGCGTTGCA 61.677 60.000 2.96 0.00 45.64 4.08
255 260 1.068250 CCTAGCTCCTAGGCGTTGC 59.932 63.158 2.96 5.87 45.64 4.17
269 274 4.917998 CACATTATACAGTGTAGCGCCTAG 59.082 45.833 2.29 0.00 0.00 3.02
270 275 4.261867 CCACATTATACAGTGTAGCGCCTA 60.262 45.833 2.29 0.00 33.99 3.93
271 276 3.492656 CCACATTATACAGTGTAGCGCCT 60.493 47.826 2.29 0.00 33.99 5.52
272 277 2.800544 CCACATTATACAGTGTAGCGCC 59.199 50.000 2.29 0.00 33.99 6.53
273 278 2.221055 GCCACATTATACAGTGTAGCGC 59.779 50.000 9.25 0.00 33.99 5.92
274 279 2.471370 CGCCACATTATACAGTGTAGCG 59.529 50.000 13.96 13.96 46.23 4.26
275 280 2.221055 GCGCCACATTATACAGTGTAGC 59.779 50.000 9.25 3.96 33.99 3.58
276 281 2.800544 GGCGCCACATTATACAGTGTAG 59.199 50.000 24.80 0.00 33.99 2.74
277 282 2.432874 AGGCGCCACATTATACAGTGTA 59.567 45.455 31.54 5.24 33.99 2.90
278 283 1.209504 AGGCGCCACATTATACAGTGT 59.790 47.619 31.54 0.00 33.99 3.55
279 284 1.953559 AGGCGCCACATTATACAGTG 58.046 50.000 31.54 0.00 35.56 3.66
280 285 2.548067 GCTAGGCGCCACATTATACAGT 60.548 50.000 31.54 5.27 0.00 3.55
281 286 2.069273 GCTAGGCGCCACATTATACAG 58.931 52.381 31.54 11.37 0.00 2.74
282 287 1.691976 AGCTAGGCGCCACATTATACA 59.308 47.619 31.54 0.33 40.39 2.29
283 288 2.028930 AGAGCTAGGCGCCACATTATAC 60.029 50.000 31.54 11.65 40.39 1.47
284 289 2.231478 GAGAGCTAGGCGCCACATTATA 59.769 50.000 31.54 10.17 40.39 0.98
285 290 1.001406 GAGAGCTAGGCGCCACATTAT 59.999 52.381 31.54 9.39 40.39 1.28
286 291 0.389391 GAGAGCTAGGCGCCACATTA 59.611 55.000 31.54 11.42 40.39 1.90
287 292 1.144936 GAGAGCTAGGCGCCACATT 59.855 57.895 31.54 10.73 40.39 2.71
288 293 2.025767 CTGAGAGCTAGGCGCCACAT 62.026 60.000 31.54 11.17 40.39 3.21
289 294 2.679996 TGAGAGCTAGGCGCCACA 60.680 61.111 31.54 15.42 40.39 4.17
290 295 2.105930 CTGAGAGCTAGGCGCCAC 59.894 66.667 31.54 17.93 40.39 5.01
291 296 3.150335 CCTGAGAGCTAGGCGCCA 61.150 66.667 31.54 14.00 40.39 5.69
301 306 3.117171 GTGTGCAGCGCCTGAGAG 61.117 66.667 2.29 0.00 32.44 3.20
302 307 4.687215 GGTGTGCAGCGCCTGAGA 62.687 66.667 2.29 0.00 44.20 3.27
308 313 0.669318 TACTAAGTGGTGTGCAGCGC 60.669 55.000 0.00 0.00 39.40 5.92
309 314 1.790755 TTACTAAGTGGTGTGCAGCG 58.209 50.000 0.00 0.00 0.00 5.18
310 315 4.766404 AAATTACTAAGTGGTGTGCAGC 57.234 40.909 0.00 0.00 0.00 5.25
311 316 6.204688 TCAGAAAATTACTAAGTGGTGTGCAG 59.795 38.462 0.00 0.00 0.00 4.41
312 317 6.058833 TCAGAAAATTACTAAGTGGTGTGCA 58.941 36.000 0.00 0.00 0.00 4.57
313 318 6.554334 TCAGAAAATTACTAAGTGGTGTGC 57.446 37.500 0.00 0.00 0.00 4.57
314 319 8.322906 TGATCAGAAAATTACTAAGTGGTGTG 57.677 34.615 0.00 0.00 0.00 3.82
317 322 9.314321 CGTATGATCAGAAAATTACTAAGTGGT 57.686 33.333 0.09 0.00 0.00 4.16
318 323 9.314321 ACGTATGATCAGAAAATTACTAAGTGG 57.686 33.333 0.09 0.00 0.00 4.00
320 325 9.871238 ACACGTATGATCAGAAAATTACTAAGT 57.129 29.630 0.09 0.00 0.00 2.24
322 327 8.600625 GCACACGTATGATCAGAAAATTACTAA 58.399 33.333 0.00 0.00 0.00 2.24
323 328 7.043656 CGCACACGTATGATCAGAAAATTACTA 60.044 37.037 0.00 0.00 33.53 1.82
324 329 6.237835 CGCACACGTATGATCAGAAAATTACT 60.238 38.462 0.00 0.00 33.53 2.24
325 330 5.896432 CGCACACGTATGATCAGAAAATTAC 59.104 40.000 0.00 0.00 33.53 1.89
326 331 5.808030 TCGCACACGTATGATCAGAAAATTA 59.192 36.000 0.00 0.00 41.18 1.40
327 332 4.629634 TCGCACACGTATGATCAGAAAATT 59.370 37.500 0.00 0.00 41.18 1.82
328 333 4.032900 GTCGCACACGTATGATCAGAAAAT 59.967 41.667 0.00 0.00 41.18 1.82
329 334 3.366724 GTCGCACACGTATGATCAGAAAA 59.633 43.478 0.00 0.00 41.18 2.29
330 335 2.921121 GTCGCACACGTATGATCAGAAA 59.079 45.455 0.00 0.00 41.18 2.52
331 336 2.526077 GTCGCACACGTATGATCAGAA 58.474 47.619 0.00 0.00 41.18 3.02
332 337 1.531058 CGTCGCACACGTATGATCAGA 60.531 52.381 0.00 0.00 44.07 3.27
333 338 0.840103 CGTCGCACACGTATGATCAG 59.160 55.000 0.00 0.00 44.07 2.90
334 339 2.938403 CGTCGCACACGTATGATCA 58.062 52.632 0.00 0.00 44.07 2.92
357 362 1.520494 TAGAGATAGGCGCTACACGG 58.480 55.000 7.64 0.00 43.93 4.94
359 364 2.885894 ACCTTAGAGATAGGCGCTACAC 59.114 50.000 7.64 0.00 36.17 2.90
360 365 2.885266 CACCTTAGAGATAGGCGCTACA 59.115 50.000 7.64 0.00 36.17 2.74
361 366 2.885894 ACACCTTAGAGATAGGCGCTAC 59.114 50.000 7.64 0.00 36.17 3.58
362 367 3.225177 ACACCTTAGAGATAGGCGCTA 57.775 47.619 7.64 0.00 36.17 4.26
363 368 2.074729 ACACCTTAGAGATAGGCGCT 57.925 50.000 7.64 0.00 36.17 5.92
364 369 2.474816 CAACACCTTAGAGATAGGCGC 58.525 52.381 0.00 0.00 36.17 6.53
365 370 2.159099 TGCAACACCTTAGAGATAGGCG 60.159 50.000 0.00 0.00 36.17 5.52
366 371 3.198872 GTGCAACACCTTAGAGATAGGC 58.801 50.000 0.00 0.00 36.17 3.93
367 372 4.081420 ACTGTGCAACACCTTAGAGATAGG 60.081 45.833 0.00 0.00 45.67 2.57
368 373 4.867047 CACTGTGCAACACCTTAGAGATAG 59.133 45.833 0.00 0.00 45.67 2.08
369 374 4.283467 ACACTGTGCAACACCTTAGAGATA 59.717 41.667 7.90 0.00 45.67 1.98
370 375 3.071602 ACACTGTGCAACACCTTAGAGAT 59.928 43.478 7.90 0.00 45.67 2.75
371 376 2.434336 ACACTGTGCAACACCTTAGAGA 59.566 45.455 7.90 0.00 45.67 3.10
372 377 2.838736 ACACTGTGCAACACCTTAGAG 58.161 47.619 7.90 0.00 45.67 2.43
373 378 3.386726 ACTACACTGTGCAACACCTTAGA 59.613 43.478 7.90 0.00 45.67 2.10
374 379 3.494626 CACTACACTGTGCAACACCTTAG 59.505 47.826 7.90 2.26 45.67 2.18
375 380 3.118555 ACACTACACTGTGCAACACCTTA 60.119 43.478 7.90 0.00 45.67 2.69
376 381 2.288666 CACTACACTGTGCAACACCTT 58.711 47.619 7.90 0.00 45.67 3.50
377 382 1.209504 ACACTACACTGTGCAACACCT 59.790 47.619 7.90 0.00 45.67 4.00
378 383 1.330521 CACACTACACTGTGCAACACC 59.669 52.381 7.90 0.00 45.67 4.16
379 384 1.330521 CCACACTACACTGTGCAACAC 59.669 52.381 7.90 0.00 45.67 3.32
381 386 0.307760 GCCACACTACACTGTGCAAC 59.692 55.000 7.90 0.00 40.33 4.17
382 387 1.157257 CGCCACACTACACTGTGCAA 61.157 55.000 7.90 0.00 40.33 4.08
383 388 1.594021 CGCCACACTACACTGTGCA 60.594 57.895 7.90 0.00 40.33 4.57
384 389 2.954753 GCGCCACACTACACTGTGC 61.955 63.158 7.90 0.00 40.33 4.57
385 390 2.317609 GGCGCCACACTACACTGTG 61.318 63.158 24.80 6.19 41.19 3.66
386 391 2.030562 GGCGCCACACTACACTGT 59.969 61.111 24.80 0.00 0.00 3.55
387 392 1.291877 GAAGGCGCCACACTACACTG 61.292 60.000 31.54 0.00 0.00 3.66
388 393 1.004918 GAAGGCGCCACACTACACT 60.005 57.895 31.54 0.00 0.00 3.55
389 394 2.380410 CGAAGGCGCCACACTACAC 61.380 63.158 31.54 8.98 0.00 2.90
390 395 2.048597 CGAAGGCGCCACACTACA 60.049 61.111 31.54 0.00 0.00 2.74
391 396 2.048503 ACGAAGGCGCCACACTAC 60.049 61.111 31.54 11.50 42.48 2.73
392 397 2.048597 CACGAAGGCGCCACACTA 60.049 61.111 31.54 0.00 42.48 2.74
393 398 4.988598 CCACGAAGGCGCCACACT 62.989 66.667 31.54 9.96 42.48 3.55
407 412 1.707239 TTTTGTGTGACGTCCGCCAC 61.707 55.000 14.12 16.57 0.00 5.01
408 413 1.025113 TTTTTGTGTGACGTCCGCCA 61.025 50.000 14.12 4.27 0.00 5.69
409 414 0.316689 CTTTTTGTGTGACGTCCGCC 60.317 55.000 14.12 1.35 0.00 6.13
410 415 0.316689 CCTTTTTGTGTGACGTCCGC 60.317 55.000 14.12 11.49 0.00 5.54
411 416 1.004292 GACCTTTTTGTGTGACGTCCG 60.004 52.381 14.12 0.00 0.00 4.79
412 417 2.011222 TGACCTTTTTGTGTGACGTCC 58.989 47.619 14.12 5.06 0.00 4.79
413 418 2.538939 GCTGACCTTTTTGTGTGACGTC 60.539 50.000 9.11 9.11 0.00 4.34
414 419 1.400494 GCTGACCTTTTTGTGTGACGT 59.600 47.619 0.00 0.00 0.00 4.34
415 420 1.268539 GGCTGACCTTTTTGTGTGACG 60.269 52.381 0.00 0.00 0.00 4.35
416 421 1.268539 CGGCTGACCTTTTTGTGTGAC 60.269 52.381 0.00 0.00 0.00 3.67
417 422 1.021202 CGGCTGACCTTTTTGTGTGA 58.979 50.000 0.00 0.00 0.00 3.58
418 423 0.594796 GCGGCTGACCTTTTTGTGTG 60.595 55.000 0.00 0.00 0.00 3.82
419 424 1.733526 GCGGCTGACCTTTTTGTGT 59.266 52.632 0.00 0.00 0.00 3.72
420 425 1.370414 CGCGGCTGACCTTTTTGTG 60.370 57.895 0.00 0.00 0.00 3.33
421 426 1.822186 ACGCGGCTGACCTTTTTGT 60.822 52.632 12.47 0.00 0.00 2.83
422 427 1.370414 CACGCGGCTGACCTTTTTG 60.370 57.895 12.47 0.00 0.00 2.44
423 428 1.098712 TTCACGCGGCTGACCTTTTT 61.099 50.000 12.47 0.00 0.00 1.94
424 429 1.098712 TTTCACGCGGCTGACCTTTT 61.099 50.000 12.47 0.00 0.00 2.27
425 430 0.889186 ATTTCACGCGGCTGACCTTT 60.889 50.000 12.47 0.00 0.00 3.11
426 431 0.036765 TATTTCACGCGGCTGACCTT 60.037 50.000 12.47 0.00 0.00 3.50
427 432 0.460284 CTATTTCACGCGGCTGACCT 60.460 55.000 12.47 0.00 0.00 3.85
428 433 0.739813 ACTATTTCACGCGGCTGACC 60.740 55.000 12.47 0.00 0.00 4.02
429 434 1.076332 AACTATTTCACGCGGCTGAC 58.924 50.000 12.47 0.00 0.00 3.51
430 435 1.730064 GAAACTATTTCACGCGGCTGA 59.270 47.619 12.47 2.44 39.45 4.26
431 436 1.463056 TGAAACTATTTCACGCGGCTG 59.537 47.619 12.47 0.00 44.21 4.85
432 437 1.803334 TGAAACTATTTCACGCGGCT 58.197 45.000 12.47 0.00 44.21 5.52
439 444 8.786826 AATGAACTATCCGTGAAACTATTTCA 57.213 30.769 0.00 0.00 46.68 2.69
440 445 9.099454 AGAATGAACTATCCGTGAAACTATTTC 57.901 33.333 0.00 0.00 40.08 2.17
443 448 9.698309 CATAGAATGAACTATCCGTGAAACTAT 57.302 33.333 0.00 0.00 31.68 2.12
444 449 8.909923 TCATAGAATGAACTATCCGTGAAACTA 58.090 33.333 0.00 0.00 36.11 2.24
445 450 7.782049 TCATAGAATGAACTATCCGTGAAACT 58.218 34.615 0.00 0.00 36.11 2.66
446 451 8.594881 ATCATAGAATGAACTATCCGTGAAAC 57.405 34.615 0.00 0.00 43.50 2.78
447 452 9.613428 AAATCATAGAATGAACTATCCGTGAAA 57.387 29.630 0.00 0.00 43.50 2.69
448 453 9.045223 CAAATCATAGAATGAACTATCCGTGAA 57.955 33.333 0.00 0.00 43.50 3.18
449 454 8.421002 TCAAATCATAGAATGAACTATCCGTGA 58.579 33.333 0.00 0.00 43.50 4.35
450 455 8.593492 TCAAATCATAGAATGAACTATCCGTG 57.407 34.615 0.00 0.00 43.50 4.94
451 456 9.784531 AATCAAATCATAGAATGAACTATCCGT 57.215 29.630 0.00 0.00 43.50 4.69
457 462 9.388506 AGACGAAATCAAATCATAGAATGAACT 57.611 29.630 0.00 0.00 43.50 3.01
492 497 2.990514 GCCGCGGTAAATTTGACAAATT 59.009 40.909 28.70 18.41 42.62 1.82
493 498 2.601804 GCCGCGGTAAATTTGACAAAT 58.398 42.857 28.70 7.62 0.00 2.32
494 499 1.663445 CGCCGCGGTAAATTTGACAAA 60.663 47.619 28.70 2.48 0.00 2.83
495 500 0.110147 CGCCGCGGTAAATTTGACAA 60.110 50.000 28.70 0.00 0.00 3.18
496 501 1.229315 ACGCCGCGGTAAATTTGACA 61.229 50.000 28.70 0.00 0.00 3.58
497 502 0.720590 TACGCCGCGGTAAATTTGAC 59.279 50.000 28.70 5.16 0.00 3.18
498 503 1.000884 CTACGCCGCGGTAAATTTGA 58.999 50.000 28.70 2.78 0.00 2.69
499 504 0.587985 GCTACGCCGCGGTAAATTTG 60.588 55.000 28.70 11.66 0.00 2.32
500 505 1.708193 GGCTACGCCGCGGTAAATTT 61.708 55.000 28.70 7.25 39.62 1.82
501 506 2.175621 GGCTACGCCGCGGTAAATT 61.176 57.895 28.70 9.13 39.62 1.82
502 507 2.586914 GGCTACGCCGCGGTAAAT 60.587 61.111 28.70 12.30 39.62 1.40
634 666 1.541233 GCCGAGAGAGAGAGAGAGAGG 60.541 61.905 0.00 0.00 0.00 3.69
635 667 1.138859 TGCCGAGAGAGAGAGAGAGAG 59.861 57.143 0.00 0.00 0.00 3.20
636 668 1.138859 CTGCCGAGAGAGAGAGAGAGA 59.861 57.143 0.00 0.00 0.00 3.10
637 669 1.138859 TCTGCCGAGAGAGAGAGAGAG 59.861 57.143 0.00 0.00 0.00 3.20
638 670 1.199615 TCTGCCGAGAGAGAGAGAGA 58.800 55.000 0.00 0.00 0.00 3.10
639 671 3.778619 TCTGCCGAGAGAGAGAGAG 57.221 57.895 0.00 0.00 0.00 3.20
656 688 0.039437 TCTGACTCGTCGTTTGGCTC 60.039 55.000 0.00 0.00 0.00 4.70
878 937 3.007506 ACACGAACAGAGAGAGAGAGAGA 59.992 47.826 0.00 0.00 0.00 3.10
879 938 3.125146 CACACGAACAGAGAGAGAGAGAG 59.875 52.174 0.00 0.00 0.00 3.20
880 939 3.070748 CACACGAACAGAGAGAGAGAGA 58.929 50.000 0.00 0.00 0.00 3.10
881 940 2.414029 GCACACGAACAGAGAGAGAGAG 60.414 54.545 0.00 0.00 0.00 3.20
882 941 1.537638 GCACACGAACAGAGAGAGAGA 59.462 52.381 0.00 0.00 0.00 3.10
883 942 1.402194 GGCACACGAACAGAGAGAGAG 60.402 57.143 0.00 0.00 0.00 3.20
884 943 0.598562 GGCACACGAACAGAGAGAGA 59.401 55.000 0.00 0.00 0.00 3.10
885 944 0.600557 AGGCACACGAACAGAGAGAG 59.399 55.000 0.00 0.00 0.00 3.20
886 945 0.315251 CAGGCACACGAACAGAGAGA 59.685 55.000 0.00 0.00 0.00 3.10
887 946 1.287730 GCAGGCACACGAACAGAGAG 61.288 60.000 0.00 0.00 0.00 3.20
888 947 1.300931 GCAGGCACACGAACAGAGA 60.301 57.895 0.00 0.00 0.00 3.10
889 948 1.287730 GAGCAGGCACACGAACAGAG 61.288 60.000 0.00 0.00 0.00 3.35
890 949 1.300931 GAGCAGGCACACGAACAGA 60.301 57.895 0.00 0.00 0.00 3.41
891 950 1.301244 AGAGCAGGCACACGAACAG 60.301 57.895 0.00 0.00 0.00 3.16
918 982 1.228245 CTGGTGGTGACTGGGGTTG 60.228 63.158 0.00 0.00 0.00 3.77
989 1053 0.603975 AGGTCGGAGTTGCTGCTTTC 60.604 55.000 0.00 0.00 0.00 2.62
1020 1084 0.528470 ACGAGTGTGAAGGAGCTAGC 59.472 55.000 6.62 6.62 0.00 3.42
1064 1128 0.185175 GGTCACACCAAAAGGAGGGT 59.815 55.000 0.00 0.00 38.42 4.34
1078 1142 2.665185 GGTGGCGTCACAGGTCAC 60.665 66.667 23.45 0.00 45.32 3.67
1183 1247 2.034066 GCAGCAGCCACCACCTTA 59.966 61.111 0.00 0.00 33.58 2.69
1249 1316 0.832135 TCCATATGTCGCCCCTCTCC 60.832 60.000 1.24 0.00 0.00 3.71
1257 1324 3.402110 TGGATCATGTTCCATATGTCGC 58.598 45.455 19.59 0.00 40.90 5.19
1372 1445 1.299014 GCTCTCGGTGCAGATCTCG 60.299 63.158 0.00 0.00 0.00 4.04
1711 1787 1.145803 CGTTGTTCTTTCCCTCGTCC 58.854 55.000 0.00 0.00 0.00 4.79
1712 1788 0.511653 GCGTTGTTCTTTCCCTCGTC 59.488 55.000 0.00 0.00 0.00 4.20
1713 1789 0.883370 GGCGTTGTTCTTTCCCTCGT 60.883 55.000 0.00 0.00 0.00 4.18
1714 1790 1.574702 GGGCGTTGTTCTTTCCCTCG 61.575 60.000 0.00 0.00 34.19 4.63
1715 1791 0.536460 TGGGCGTTGTTCTTTCCCTC 60.536 55.000 0.00 0.00 37.83 4.30
1716 1792 0.537371 CTGGGCGTTGTTCTTTCCCT 60.537 55.000 0.00 0.00 37.83 4.20
1720 1796 1.318576 CTTCCTGGGCGTTGTTCTTT 58.681 50.000 0.00 0.00 0.00 2.52
1757 1833 3.041940 CTCGCGGGTTTGCTCGTT 61.042 61.111 6.13 0.00 41.45 3.85
1765 1841 4.377760 TCCTCCTCCTCGCGGGTT 62.378 66.667 4.71 0.00 36.25 4.11
1783 1859 2.024163 TCGCCGTCATCGTCATCG 59.976 61.111 0.00 0.00 38.55 3.84
1784 1860 2.286559 CGTCGCCGTCATCGTCATC 61.287 63.158 0.00 0.00 35.01 2.92
1785 1861 2.277949 CGTCGCCGTCATCGTCAT 60.278 61.111 0.00 0.00 35.01 3.06
1786 1862 3.376914 CTCGTCGCCGTCATCGTCA 62.377 63.158 0.00 0.00 35.01 4.35
1801 1877 2.361357 ACGACCTGGACCTCCTCG 60.361 66.667 0.00 0.00 37.28 4.63
1940 2016 1.178276 GTGTCACTGATCTCGGAGGT 58.822 55.000 4.96 0.00 0.00 3.85
2246 2328 2.560504 CATGGAATCGGACGGAATCAA 58.439 47.619 1.10 0.00 0.00 2.57
2321 2410 6.183360 ACACAAACATGCATATATTACGCACA 60.183 34.615 0.00 0.00 38.73 4.57
2597 2718 3.732048 AGGAACCGGACAAAATGGTAT 57.268 42.857 9.46 0.00 34.11 2.73
2635 2756 1.354101 AGTTGGGTTCGGTACATCCA 58.646 50.000 0.00 0.00 35.57 3.41
2638 2759 2.237893 CCCTTAGTTGGGTTCGGTACAT 59.762 50.000 0.00 0.00 42.25 2.29
2650 2771 4.016444 ACCATTGTACATGCCCTTAGTTG 58.984 43.478 0.00 0.00 0.00 3.16
2658 2779 6.639632 ATCTTATCAACCATTGTACATGCC 57.360 37.500 0.00 0.00 0.00 4.40
2659 2780 9.831737 GAATATCTTATCAACCATTGTACATGC 57.168 33.333 0.00 0.00 0.00 4.06
2693 2814 8.887717 GTCATCTCTAAATTACATGCAAGACTT 58.112 33.333 0.00 0.00 0.00 3.01
2694 2815 8.043113 TGTCATCTCTAAATTACATGCAAGACT 58.957 33.333 0.00 0.00 0.00 3.24
2695 2816 8.201554 TGTCATCTCTAAATTACATGCAAGAC 57.798 34.615 0.00 0.00 0.00 3.01
2696 2817 8.791327 TTGTCATCTCTAAATTACATGCAAGA 57.209 30.769 0.00 0.00 0.00 3.02
2697 2818 9.844790 TTTTGTCATCTCTAAATTACATGCAAG 57.155 29.630 0.00 0.00 0.00 4.01
2698 2819 9.844790 CTTTTGTCATCTCTAAATTACATGCAA 57.155 29.630 0.00 0.00 0.00 4.08
2699 2820 9.230122 TCTTTTGTCATCTCTAAATTACATGCA 57.770 29.630 0.00 0.00 0.00 3.96
2716 2837 9.778741 GACCCATTATAGACATATCTTTTGTCA 57.221 33.333 6.59 0.00 44.73 3.58
2717 2838 9.778741 TGACCCATTATAGACATATCTTTTGTC 57.221 33.333 0.00 0.00 43.05 3.18
2722 2843 9.781425 AGAGATGACCCATTATAGACATATCTT 57.219 33.333 0.00 0.00 34.27 2.40
2723 2844 9.781425 AAGAGATGACCCATTATAGACATATCT 57.219 33.333 0.00 0.00 37.73 1.98
2726 2847 8.972127 GCTAAGAGATGACCCATTATAGACATA 58.028 37.037 0.00 0.00 0.00 2.29
2727 2848 7.093112 GGCTAAGAGATGACCCATTATAGACAT 60.093 40.741 0.00 0.00 0.00 3.06
2728 2849 6.211584 GGCTAAGAGATGACCCATTATAGACA 59.788 42.308 0.00 0.00 0.00 3.41
2729 2850 6.439058 AGGCTAAGAGATGACCCATTATAGAC 59.561 42.308 0.00 0.00 0.00 2.59
2730 2851 6.565974 AGGCTAAGAGATGACCCATTATAGA 58.434 40.000 0.00 0.00 0.00 1.98
2731 2852 6.865834 AGGCTAAGAGATGACCCATTATAG 57.134 41.667 0.00 0.00 0.00 1.31
2732 2853 8.917414 ATAAGGCTAAGAGATGACCCATTATA 57.083 34.615 0.00 0.00 0.00 0.98
2733 2854 7.682028 AGATAAGGCTAAGAGATGACCCATTAT 59.318 37.037 0.00 0.00 0.00 1.28
2734 2855 7.019388 AGATAAGGCTAAGAGATGACCCATTA 58.981 38.462 0.00 0.00 0.00 1.90
2735 2856 5.848921 AGATAAGGCTAAGAGATGACCCATT 59.151 40.000 0.00 0.00 0.00 3.16
2736 2857 5.410602 AGATAAGGCTAAGAGATGACCCAT 58.589 41.667 0.00 0.00 0.00 4.00
2737 2858 4.820775 AGATAAGGCTAAGAGATGACCCA 58.179 43.478 0.00 0.00 0.00 4.51
2738 2859 5.305644 TGAAGATAAGGCTAAGAGATGACCC 59.694 44.000 0.00 0.00 0.00 4.46
2739 2860 6.412362 TGAAGATAAGGCTAAGAGATGACC 57.588 41.667 0.00 0.00 0.00 4.02
2740 2861 9.988815 TTATTGAAGATAAGGCTAAGAGATGAC 57.011 33.333 0.00 0.00 0.00 3.06
2741 2862 9.988815 GTTATTGAAGATAAGGCTAAGAGATGA 57.011 33.333 0.00 0.00 0.00 2.92
2742 2863 9.995003 AGTTATTGAAGATAAGGCTAAGAGATG 57.005 33.333 0.00 0.00 0.00 2.90
2769 2890 8.842280 TGTCTCACCACGTTTTTAGAAATAATT 58.158 29.630 0.00 0.00 0.00 1.40
2770 2891 8.385898 TGTCTCACCACGTTTTTAGAAATAAT 57.614 30.769 0.00 0.00 0.00 1.28
2771 2892 7.789273 TGTCTCACCACGTTTTTAGAAATAA 57.211 32.000 0.00 0.00 0.00 1.40
2772 2893 7.972832 ATGTCTCACCACGTTTTTAGAAATA 57.027 32.000 0.00 0.00 0.00 1.40
2773 2894 6.877611 ATGTCTCACCACGTTTTTAGAAAT 57.122 33.333 0.00 0.00 0.00 2.17
2774 2895 7.972832 ATATGTCTCACCACGTTTTTAGAAA 57.027 32.000 0.00 0.00 0.00 2.52
2775 2896 7.442969 ACAATATGTCTCACCACGTTTTTAGAA 59.557 33.333 0.00 0.00 0.00 2.10
2776 2897 6.932400 ACAATATGTCTCACCACGTTTTTAGA 59.068 34.615 0.00 0.00 0.00 2.10
2777 2898 7.015289 CACAATATGTCTCACCACGTTTTTAG 58.985 38.462 0.00 0.00 0.00 1.85
2778 2899 6.566942 GCACAATATGTCTCACCACGTTTTTA 60.567 38.462 0.00 0.00 0.00 1.52
2779 2900 5.757886 CACAATATGTCTCACCACGTTTTT 58.242 37.500 0.00 0.00 0.00 1.94
2780 2901 4.320202 GCACAATATGTCTCACCACGTTTT 60.320 41.667 0.00 0.00 0.00 2.43
2781 2902 3.188460 GCACAATATGTCTCACCACGTTT 59.812 43.478 0.00 0.00 0.00 3.60
2782 2903 2.742053 GCACAATATGTCTCACCACGTT 59.258 45.455 0.00 0.00 0.00 3.99
2783 2904 2.028112 AGCACAATATGTCTCACCACGT 60.028 45.455 0.00 0.00 0.00 4.49
2784 2905 2.621338 AGCACAATATGTCTCACCACG 58.379 47.619 0.00 0.00 0.00 4.94
2785 2906 5.419542 TCTTAGCACAATATGTCTCACCAC 58.580 41.667 0.00 0.00 0.00 4.16
2786 2907 5.422012 TCTCTTAGCACAATATGTCTCACCA 59.578 40.000 0.00 0.00 0.00 4.17
2787 2908 5.907207 TCTCTTAGCACAATATGTCTCACC 58.093 41.667 0.00 0.00 0.00 4.02
2788 2909 7.205992 TGATCTCTTAGCACAATATGTCTCAC 58.794 38.462 0.00 0.00 0.00 3.51
2789 2910 7.352079 TGATCTCTTAGCACAATATGTCTCA 57.648 36.000 0.00 0.00 0.00 3.27
2790 2911 8.306038 AGATGATCTCTTAGCACAATATGTCTC 58.694 37.037 0.00 0.00 0.00 3.36
2791 2912 8.192743 AGATGATCTCTTAGCACAATATGTCT 57.807 34.615 0.00 0.00 0.00 3.41
2792 2913 8.464770 GAGATGATCTCTTAGCACAATATGTC 57.535 38.462 14.98 0.00 40.30 3.06
2826 2947 9.574516 AAAAGGCTTGTCTTCTCTTATTTAAGA 57.425 29.630 0.00 0.44 39.82 2.10
2827 2948 9.833182 GAAAAGGCTTGTCTTCTCTTATTTAAG 57.167 33.333 10.26 0.00 34.65 1.85
2828 2949 9.574516 AGAAAAGGCTTGTCTTCTCTTATTTAA 57.425 29.630 14.33 0.00 0.00 1.52
2829 2950 9.574516 AAGAAAAGGCTTGTCTTCTCTTATTTA 57.425 29.630 23.96 0.00 33.68 1.40
2830 2951 8.470657 AAGAAAAGGCTTGTCTTCTCTTATTT 57.529 30.769 23.96 2.07 33.68 1.40
2831 2952 9.746457 ATAAGAAAAGGCTTGTCTTCTCTTATT 57.254 29.630 30.86 11.70 40.94 1.40
2832 2953 9.171877 CATAAGAAAAGGCTTGTCTTCTCTTAT 57.828 33.333 30.86 18.17 42.82 1.73
2833 2954 8.375506 TCATAAGAAAAGGCTTGTCTTCTCTTA 58.624 33.333 30.86 16.85 39.30 2.10
2834 2955 7.227156 TCATAAGAAAAGGCTTGTCTTCTCTT 58.773 34.615 30.86 18.21 37.66 2.85
2835 2956 6.773638 TCATAAGAAAAGGCTTGTCTTCTCT 58.226 36.000 30.86 16.87 33.70 3.10
2836 2957 7.622893 ATCATAAGAAAAGGCTTGTCTTCTC 57.377 36.000 30.86 8.39 33.70 2.87
2837 2958 7.887495 AGAATCATAAGAAAAGGCTTGTCTTCT 59.113 33.333 30.86 21.01 33.70 2.85
2838 2959 8.049655 AGAATCATAAGAAAAGGCTTGTCTTC 57.950 34.615 30.86 18.26 33.70 2.87
2839 2960 7.887495 AGAGAATCATAAGAAAAGGCTTGTCTT 59.113 33.333 30.04 30.04 37.82 3.01
2840 2961 7.401246 AGAGAATCATAAGAAAAGGCTTGTCT 58.599 34.615 14.33 14.33 37.82 3.41
2841 2962 7.552330 AGAGAGAATCATAAGAAAAGGCTTGTC 59.448 37.037 9.51 9.51 37.82 3.18
2842 2963 7.401246 AGAGAGAATCATAAGAAAAGGCTTGT 58.599 34.615 0.00 0.00 37.82 3.16
2843 2964 7.012232 GGAGAGAGAATCATAAGAAAAGGCTTG 59.988 40.741 0.00 0.00 37.82 4.01
2844 2965 7.053498 GGAGAGAGAATCATAAGAAAAGGCTT 58.947 38.462 0.00 0.00 37.82 4.35
2845 2966 6.386635 AGGAGAGAGAATCATAAGAAAAGGCT 59.613 38.462 0.00 0.00 37.82 4.58
2846 2967 6.591001 AGGAGAGAGAATCATAAGAAAAGGC 58.409 40.000 0.00 0.00 37.82 4.35
2847 2968 8.263640 TGAAGGAGAGAGAATCATAAGAAAAGG 58.736 37.037 0.00 0.00 37.82 3.11
2848 2969 9.097257 GTGAAGGAGAGAGAATCATAAGAAAAG 57.903 37.037 0.00 0.00 37.82 2.27
2849 2970 8.043710 GGTGAAGGAGAGAGAATCATAAGAAAA 58.956 37.037 0.00 0.00 37.82 2.29
2850 2971 7.401493 AGGTGAAGGAGAGAGAATCATAAGAAA 59.599 37.037 0.00 0.00 37.82 2.52
2851 2972 6.900186 AGGTGAAGGAGAGAGAATCATAAGAA 59.100 38.462 0.00 0.00 37.82 2.52
2852 2973 6.439487 AGGTGAAGGAGAGAGAATCATAAGA 58.561 40.000 0.00 0.00 37.82 2.10
2853 2974 6.323482 TGAGGTGAAGGAGAGAGAATCATAAG 59.677 42.308 0.00 0.00 37.82 1.73
2854 2975 6.197903 TGAGGTGAAGGAGAGAGAATCATAA 58.802 40.000 0.00 0.00 37.82 1.90
2855 2976 5.770919 TGAGGTGAAGGAGAGAGAATCATA 58.229 41.667 0.00 0.00 37.82 2.15
2856 2977 4.618635 TGAGGTGAAGGAGAGAGAATCAT 58.381 43.478 0.00 0.00 37.82 2.45
2857 2978 4.053009 TGAGGTGAAGGAGAGAGAATCA 57.947 45.455 0.00 0.00 37.82 2.57
2858 2979 5.612725 AATGAGGTGAAGGAGAGAGAATC 57.387 43.478 0.00 0.00 0.00 2.52
2859 2980 7.688918 AATAATGAGGTGAAGGAGAGAGAAT 57.311 36.000 0.00 0.00 0.00 2.40
2860 2981 7.502060 AAATAATGAGGTGAAGGAGAGAGAA 57.498 36.000 0.00 0.00 0.00 2.87
2861 2982 8.789767 ATAAATAATGAGGTGAAGGAGAGAGA 57.210 34.615 0.00 0.00 0.00 3.10
2862 2983 8.093927 GGATAAATAATGAGGTGAAGGAGAGAG 58.906 40.741 0.00 0.00 0.00 3.20
2863 2984 7.791766 AGGATAAATAATGAGGTGAAGGAGAGA 59.208 37.037 0.00 0.00 0.00 3.10
2864 2985 7.972301 AGGATAAATAATGAGGTGAAGGAGAG 58.028 38.462 0.00 0.00 0.00 3.20
2865 2986 7.937700 AGGATAAATAATGAGGTGAAGGAGA 57.062 36.000 0.00 0.00 0.00 3.71
2866 2987 7.815068 CGTAGGATAAATAATGAGGTGAAGGAG 59.185 40.741 0.00 0.00 0.00 3.69
2867 2988 7.289317 ACGTAGGATAAATAATGAGGTGAAGGA 59.711 37.037 0.00 0.00 0.00 3.36
2868 2989 7.385205 CACGTAGGATAAATAATGAGGTGAAGG 59.615 40.741 0.00 0.00 0.00 3.46
2869 2990 7.385205 CCACGTAGGATAAATAATGAGGTGAAG 59.615 40.741 0.00 0.00 41.22 3.02
2870 2991 7.214381 CCACGTAGGATAAATAATGAGGTGAA 58.786 38.462 0.00 0.00 41.22 3.18
2871 2992 6.740401 GCCACGTAGGATAAATAATGAGGTGA 60.740 42.308 8.04 0.00 41.22 4.02
2872 2993 5.408604 GCCACGTAGGATAAATAATGAGGTG 59.591 44.000 8.04 0.00 41.22 4.00
2873 2994 5.071250 TGCCACGTAGGATAAATAATGAGGT 59.929 40.000 8.04 0.00 41.22 3.85
2874 2995 5.547465 TGCCACGTAGGATAAATAATGAGG 58.453 41.667 8.04 0.00 41.22 3.86
2875 2996 7.148407 GGAATGCCACGTAGGATAAATAATGAG 60.148 40.741 8.04 0.00 41.22 2.90
2876 2997 6.653320 GGAATGCCACGTAGGATAAATAATGA 59.347 38.462 8.04 0.00 41.22 2.57
2877 2998 6.655003 AGGAATGCCACGTAGGATAAATAATG 59.345 38.462 8.04 0.00 41.22 1.90
2878 2999 6.779860 AGGAATGCCACGTAGGATAAATAAT 58.220 36.000 8.04 0.00 41.22 1.28
2879 3000 6.182507 AGGAATGCCACGTAGGATAAATAA 57.817 37.500 8.04 0.00 41.22 1.40
2880 3001 5.818678 AGGAATGCCACGTAGGATAAATA 57.181 39.130 8.04 0.00 41.22 1.40
2881 3002 4.706842 AGGAATGCCACGTAGGATAAAT 57.293 40.909 8.04 0.00 41.22 1.40
2882 3003 5.364446 TCTTAGGAATGCCACGTAGGATAAA 59.636 40.000 8.04 0.00 41.22 1.40
2883 3004 4.897076 TCTTAGGAATGCCACGTAGGATAA 59.103 41.667 8.04 0.00 41.22 1.75
2884 3005 4.476297 TCTTAGGAATGCCACGTAGGATA 58.524 43.478 8.04 0.00 41.22 2.59
2885 3006 3.305720 TCTTAGGAATGCCACGTAGGAT 58.694 45.455 8.04 0.00 41.22 3.24
2886 3007 2.742348 TCTTAGGAATGCCACGTAGGA 58.258 47.619 8.04 0.00 41.22 2.94
2887 3008 3.753294 ATCTTAGGAATGCCACGTAGG 57.247 47.619 0.00 0.00 41.84 3.18
2888 3009 4.238514 GCTATCTTAGGAATGCCACGTAG 58.761 47.826 0.00 0.00 36.29 3.51
2889 3010 3.639561 TGCTATCTTAGGAATGCCACGTA 59.360 43.478 0.00 0.00 36.29 3.57
2890 3011 2.434336 TGCTATCTTAGGAATGCCACGT 59.566 45.455 0.00 0.00 36.29 4.49
2891 3012 2.802816 GTGCTATCTTAGGAATGCCACG 59.197 50.000 0.00 0.00 36.29 4.94
2892 3013 3.142174 GGTGCTATCTTAGGAATGCCAC 58.858 50.000 0.00 0.00 36.29 5.01
2893 3014 2.777114 TGGTGCTATCTTAGGAATGCCA 59.223 45.455 0.00 0.00 36.29 4.92
2894 3015 3.492102 TGGTGCTATCTTAGGAATGCC 57.508 47.619 0.00 0.00 0.00 4.40
2895 3016 4.823989 ACAATGGTGCTATCTTAGGAATGC 59.176 41.667 0.00 0.00 0.00 3.56
2896 3017 6.992123 TGTACAATGGTGCTATCTTAGGAATG 59.008 38.462 0.00 0.00 0.00 2.67
2897 3018 7.136822 TGTACAATGGTGCTATCTTAGGAAT 57.863 36.000 0.00 0.00 0.00 3.01
2898 3019 6.553953 TGTACAATGGTGCTATCTTAGGAA 57.446 37.500 0.00 0.00 0.00 3.36
2899 3020 6.099701 ACATGTACAATGGTGCTATCTTAGGA 59.900 38.462 0.00 0.00 0.00 2.94
2900 3021 6.291377 ACATGTACAATGGTGCTATCTTAGG 58.709 40.000 0.00 0.00 0.00 2.69
2901 3022 6.425114 GGACATGTACAATGGTGCTATCTTAG 59.575 42.308 2.19 0.00 0.00 2.18
2902 3023 6.099701 AGGACATGTACAATGGTGCTATCTTA 59.900 38.462 11.55 0.00 29.77 2.10
2903 3024 5.104360 AGGACATGTACAATGGTGCTATCTT 60.104 40.000 11.55 0.00 29.77 2.40
2904 3025 4.410228 AGGACATGTACAATGGTGCTATCT 59.590 41.667 11.55 0.00 29.77 1.98
2905 3026 4.708177 AGGACATGTACAATGGTGCTATC 58.292 43.478 11.55 0.00 29.77 2.08
2906 3027 4.778213 AGGACATGTACAATGGTGCTAT 57.222 40.909 11.55 0.00 29.77 2.97
2907 3028 5.423931 TCTTAGGACATGTACAATGGTGCTA 59.576 40.000 11.55 17.09 33.81 3.49
2908 3029 4.225042 TCTTAGGACATGTACAATGGTGCT 59.775 41.667 11.55 18.59 35.97 4.40
2909 3030 4.332819 GTCTTAGGACATGTACAATGGTGC 59.667 45.833 11.55 4.37 41.75 5.01
2910 3031 4.876107 GGTCTTAGGACATGTACAATGGTG 59.124 45.833 11.55 0.00 43.77 4.17
2911 3032 4.534500 TGGTCTTAGGACATGTACAATGGT 59.466 41.667 11.55 0.00 43.77 3.55
2912 3033 5.097742 TGGTCTTAGGACATGTACAATGG 57.902 43.478 11.55 0.00 43.77 3.16
2913 3034 7.362056 CCTTTTGGTCTTAGGACATGTACAATG 60.362 40.741 11.55 1.63 43.77 2.82
2914 3035 6.659242 CCTTTTGGTCTTAGGACATGTACAAT 59.341 38.462 11.55 0.00 43.77 2.71
2915 3036 6.001460 CCTTTTGGTCTTAGGACATGTACAA 58.999 40.000 11.55 1.90 43.77 2.41
2916 3037 5.308497 TCCTTTTGGTCTTAGGACATGTACA 59.692 40.000 11.55 0.00 43.77 2.90
2917 3038 5.801380 TCCTTTTGGTCTTAGGACATGTAC 58.199 41.667 7.35 0.00 43.77 2.90
2919 3040 4.993705 TCCTTTTGGTCTTAGGACATGT 57.006 40.909 7.35 0.00 43.77 3.21
2924 3045 4.903045 ATTCGTCCTTTTGGTCTTAGGA 57.097 40.909 0.00 0.00 41.38 2.94
2925 3046 6.313164 GTCTTATTCGTCCTTTTGGTCTTAGG 59.687 42.308 0.00 0.00 41.38 2.69
2926 3047 6.034683 CGTCTTATTCGTCCTTTTGGTCTTAG 59.965 42.308 0.00 0.00 41.38 2.18
2927 3048 5.865552 CGTCTTATTCGTCCTTTTGGTCTTA 59.134 40.000 0.00 0.00 41.38 2.10
2928 3049 4.689345 CGTCTTATTCGTCCTTTTGGTCTT 59.311 41.667 0.00 0.00 41.38 3.01
2929 3050 4.243270 CGTCTTATTCGTCCTTTTGGTCT 58.757 43.478 0.00 0.00 41.38 3.85
2930 3051 3.181523 GCGTCTTATTCGTCCTTTTGGTC 60.182 47.826 0.00 0.00 41.38 4.02
2979 3100 1.003812 CCGACCCAACCTATTCCAACA 59.996 52.381 0.00 0.00 0.00 3.33
2990 3111 2.091102 TTGACGACCTCCGACCCAAC 62.091 60.000 0.00 0.00 41.76 3.77
2996 3117 1.863662 GACTGCTTGACGACCTCCGA 61.864 60.000 0.00 0.00 41.76 4.55
3024 3145 6.609616 AGGTTTTGGTTTTCTCCTAATTGACA 59.390 34.615 0.00 0.00 0.00 3.58
3025 3146 7.014326 AGAGGTTTTGGTTTTCTCCTAATTGAC 59.986 37.037 0.00 0.00 0.00 3.18
3029 3154 7.066781 TGAAGAGGTTTTGGTTTTCTCCTAAT 58.933 34.615 0.00 0.00 0.00 1.73
3031 3156 6.008696 TGAAGAGGTTTTGGTTTTCTCCTA 57.991 37.500 0.00 0.00 0.00 2.94
3080 3205 2.983898 TCTTACCTAAACCCTGCAACCT 59.016 45.455 0.00 0.00 0.00 3.50
3110 3235 2.336341 TTTTTCGCTTCACCGGCAT 58.664 47.368 0.00 0.00 0.00 4.40
3158 3283 3.256960 TGGCTCCCCCAACCACTC 61.257 66.667 0.00 0.00 41.82 3.51
3282 3407 0.535102 CCCTTGGTCTTGTTGCGACT 60.535 55.000 5.50 0.00 0.00 4.18
3290 3415 1.171308 CATCACTGCCCTTGGTCTTG 58.829 55.000 0.00 0.00 0.00 3.02
3304 3429 2.878406 ACACACTTTGCACTACCATCAC 59.122 45.455 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.