Multiple sequence alignment - TraesCS4B01G216300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G216300 chr4B 100.000 7023 0 0 1 7023 456346034 456353056 0.000000e+00 12970.0
1 TraesCS4B01G216300 chr4B 91.102 1652 73 18 2224 3826 408982359 408980733 0.000000e+00 2169.0
2 TraesCS4B01G216300 chr4B 93.062 663 44 2 194 855 544292956 544293617 0.000000e+00 968.0
3 TraesCS4B01G216300 chr4B 87.847 288 25 6 6631 6909 670067325 670067611 5.250000e-86 329.0
4 TraesCS4B01G216300 chr4D 93.399 2621 100 24 3827 6439 371132788 371135343 0.000000e+00 3814.0
5 TraesCS4B01G216300 chr4D 97.704 784 14 4 859 1639 371131378 371132160 0.000000e+00 1345.0
6 TraesCS4B01G216300 chr4D 95.064 547 19 3 1643 2187 371132252 371132792 0.000000e+00 854.0
7 TraesCS4B01G216300 chr4D 94.262 122 7 0 6902 7023 9306634 9306755 3.340000e-43 187.0
8 TraesCS4B01G216300 chr4D 86.577 149 15 3 3825 3970 482705692 482705546 7.290000e-35 159.0
9 TraesCS4B01G216300 chr4A 90.423 2057 89 39 4424 6439 92743685 92741696 0.000000e+00 2608.0
10 TraesCS4B01G216300 chr4A 94.772 1358 34 19 859 2187 92745951 92744602 0.000000e+00 2080.0
11 TraesCS4B01G216300 chr4A 94.902 510 22 4 3906 4413 92744353 92743846 0.000000e+00 795.0
12 TraesCS4B01G216300 chr4A 94.690 113 6 0 6911 7023 623949299 623949187 7.240000e-40 176.0
13 TraesCS4B01G216300 chr4A 92.632 95 7 0 3825 3919 92744608 92744514 3.420000e-28 137.0
14 TraesCS4B01G216300 chr5B 93.957 1688 58 7 2186 3832 130395421 130393737 0.000000e+00 2512.0
15 TraesCS4B01G216300 chr5B 92.575 1670 60 12 2188 3826 258515891 258517527 0.000000e+00 2338.0
16 TraesCS4B01G216300 chr5B 96.448 1295 30 6 2548 3826 699786964 699788258 0.000000e+00 2122.0
17 TraesCS4B01G216300 chr5B 94.365 1331 26 6 2187 3496 140751808 140750506 0.000000e+00 1997.0
18 TraesCS4B01G216300 chr5B 90.289 1143 72 13 2224 3344 692436853 692437978 0.000000e+00 1459.0
19 TraesCS4B01G216300 chr5B 92.437 238 8 2 2188 2415 436162584 436162821 1.460000e-86 331.0
20 TraesCS4B01G216300 chr6B 94.326 1639 56 8 2188 3796 509322306 509323937 0.000000e+00 2477.0
21 TraesCS4B01G216300 chr6B 92.170 1673 92 11 2188 3826 420761972 420763639 0.000000e+00 2327.0
22 TraesCS4B01G216300 chr6B 91.556 225 4 2 2188 2397 509323713 509323937 5.330000e-76 296.0
23 TraesCS4B01G216300 chr1B 93.914 1643 66 8 2187 3798 74238317 74239956 0.000000e+00 2449.0
24 TraesCS4B01G216300 chr1B 92.566 1668 78 15 2188 3826 286773977 286775627 0.000000e+00 2351.0
25 TraesCS4B01G216300 chr1B 91.515 660 36 6 2188 2827 117184187 117184846 0.000000e+00 891.0
26 TraesCS4B01G216300 chr1B 90.909 55 1 3 6434 6487 377260594 377260645 3.510000e-08 71.3
27 TraesCS4B01G216300 chr7B 93.249 1659 60 17 2188 3826 382525589 382523963 0.000000e+00 2396.0
28 TraesCS4B01G216300 chr7B 89.898 1178 58 18 2188 3342 524618219 524617080 0.000000e+00 1459.0
29 TraesCS4B01G216300 chr7B 91.604 667 30 6 2187 2827 323203113 323203779 0.000000e+00 898.0
30 TraesCS4B01G216300 chr7B 90.991 666 34 6 2188 2827 16919414 16918749 0.000000e+00 874.0
31 TraesCS4B01G216300 chr7B 89.062 256 12 2 2188 2427 323204774 323205029 3.180000e-78 303.0
32 TraesCS4B01G216300 chr7B 91.623 191 1 2 2188 2364 524616692 524616503 4.210000e-62 250.0
33 TraesCS4B01G216300 chr7B 93.220 118 8 0 6906 7023 640260780 640260897 2.600000e-39 174.0
34 TraesCS4B01G216300 chr7B 77.165 254 41 7 3825 4078 513715834 513716070 1.590000e-26 132.0
35 TraesCS4B01G216300 chr3B 91.898 1654 70 11 2224 3826 785670320 785671960 0.000000e+00 2254.0
36 TraesCS4B01G216300 chr3B 86.458 288 25 8 6631 6909 115800119 115800401 3.180000e-78 303.0
37 TraesCS4B01G216300 chr3B 94.118 119 7 0 6905 7023 616891556 616891674 1.560000e-41 182.0
38 TraesCS4B01G216300 chr3B 91.892 74 5 1 6434 6507 115799290 115799362 1.250000e-17 102.0
39 TraesCS4B01G216300 chr2B 95.049 1131 45 4 2705 3827 195686076 195687203 0.000000e+00 1768.0
40 TraesCS4B01G216300 chr2B 95.055 991 39 3 2843 3826 711438095 711439082 0.000000e+00 1550.0
41 TraesCS4B01G216300 chr2B 90.750 1146 58 15 2224 3340 441879525 441878399 0.000000e+00 1485.0
42 TraesCS4B01G216300 chr2B 92.226 656 29 4 2188 2827 195685468 195686117 0.000000e+00 909.0
43 TraesCS4B01G216300 chr5D 91.561 628 40 8 2190 2805 263147299 263147925 0.000000e+00 854.0
44 TraesCS4B01G216300 chr5D 93.162 117 8 0 6907 7023 360747300 360747416 9.370000e-39 172.0
45 TraesCS4B01G216300 chr3D 91.128 541 43 4 319 854 607271202 607270662 0.000000e+00 728.0
46 TraesCS4B01G216300 chr3D 87.500 304 31 5 6612 6910 268627065 268626764 1.880000e-90 344.0
47 TraesCS4B01G216300 chr3D 93.333 120 8 0 6904 7023 531052549 531052430 2.010000e-40 178.0
48 TraesCS4B01G216300 chr3D 94.203 69 4 0 6437 6505 505800366 505800298 9.630000e-19 106.0
49 TraesCS4B01G216300 chr3A 93.485 307 12 3 6612 6910 19770283 19769977 3.860000e-122 449.0
50 TraesCS4B01G216300 chr3A 94.505 182 10 0 6433 6614 19770756 19770575 1.490000e-71 281.0
51 TraesCS4B01G216300 chr3A 94.068 118 7 0 6906 7023 41614327 41614444 5.600000e-41 180.0
52 TraesCS4B01G216300 chr3A 91.270 126 9 2 6899 7023 634235347 634235223 3.370000e-38 171.0
53 TraesCS4B01G216300 chr6D 89.109 303 27 4 6612 6910 362783944 362783644 8.600000e-99 372.0
54 TraesCS4B01G216300 chr6D 92.500 120 9 0 6904 7023 467805928 467806047 9.370000e-39 172.0
55 TraesCS4B01G216300 chr6D 82.967 182 26 1 6437 6613 362784625 362784444 7.290000e-35 159.0
56 TraesCS4B01G216300 chr7A 88.158 304 29 5 6612 6910 602055330 602055029 8.660000e-94 355.0
57 TraesCS4B01G216300 chr7A 89.474 57 1 4 6437 6491 635099248 635099195 4.550000e-07 67.6
58 TraesCS4B01G216300 chr2D 87.018 285 23 7 6634 6909 261823643 261823364 6.840000e-80 309.0
59 TraesCS4B01G216300 chr2D 91.045 67 6 0 6439 6505 261832310 261832244 2.700000e-14 91.6
60 TraesCS4B01G216300 chr2D 93.878 49 3 0 2135 2183 102542350 102542398 2.720000e-09 75.0
61 TraesCS4B01G216300 chr1D 86.851 289 23 8 6631 6909 473526244 473526527 6.840000e-80 309.0
62 TraesCS4B01G216300 chr1D 95.522 67 3 0 6439 6505 473525480 473525546 2.680000e-19 108.0
63 TraesCS4B01G216300 chr6A 86.667 285 28 7 6634 6909 557569039 557568756 2.460000e-79 307.0
64 TraesCS4B01G216300 chr5A 85.906 149 16 3 3825 3970 659865424 659865570 3.390000e-33 154.0
65 TraesCS4B01G216300 chrUn 79.227 207 27 10 3877 4078 21384410 21384215 5.720000e-26 130.0
66 TraesCS4B01G216300 chr2A 94.340 53 3 0 2135 2187 101536168 101536220 1.620000e-11 82.4
67 TraesCS4B01G216300 chr2A 88.333 60 2 4 6434 6491 604994264 604994320 4.550000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G216300 chr4B 456346034 456353056 7022 False 12970.000000 12970 100.00000 1 7023 1 chr4B.!!$F1 7022
1 TraesCS4B01G216300 chr4B 408980733 408982359 1626 True 2169.000000 2169 91.10200 2224 3826 1 chr4B.!!$R1 1602
2 TraesCS4B01G216300 chr4B 544292956 544293617 661 False 968.000000 968 93.06200 194 855 1 chr4B.!!$F2 661
3 TraesCS4B01G216300 chr4D 371131378 371135343 3965 False 2004.333333 3814 95.38900 859 6439 3 chr4D.!!$F2 5580
4 TraesCS4B01G216300 chr4A 92741696 92745951 4255 True 1405.000000 2608 93.18225 859 6439 4 chr4A.!!$R2 5580
5 TraesCS4B01G216300 chr5B 130393737 130395421 1684 True 2512.000000 2512 93.95700 2186 3832 1 chr5B.!!$R1 1646
6 TraesCS4B01G216300 chr5B 258515891 258517527 1636 False 2338.000000 2338 92.57500 2188 3826 1 chr5B.!!$F1 1638
7 TraesCS4B01G216300 chr5B 699786964 699788258 1294 False 2122.000000 2122 96.44800 2548 3826 1 chr5B.!!$F4 1278
8 TraesCS4B01G216300 chr5B 140750506 140751808 1302 True 1997.000000 1997 94.36500 2187 3496 1 chr5B.!!$R2 1309
9 TraesCS4B01G216300 chr5B 692436853 692437978 1125 False 1459.000000 1459 90.28900 2224 3344 1 chr5B.!!$F3 1120
10 TraesCS4B01G216300 chr6B 420761972 420763639 1667 False 2327.000000 2327 92.17000 2188 3826 1 chr6B.!!$F1 1638
11 TraesCS4B01G216300 chr6B 509322306 509323937 1631 False 1386.500000 2477 92.94100 2188 3796 2 chr6B.!!$F2 1608
12 TraesCS4B01G216300 chr1B 74238317 74239956 1639 False 2449.000000 2449 93.91400 2187 3798 1 chr1B.!!$F1 1611
13 TraesCS4B01G216300 chr1B 286773977 286775627 1650 False 2351.000000 2351 92.56600 2188 3826 1 chr1B.!!$F3 1638
14 TraesCS4B01G216300 chr1B 117184187 117184846 659 False 891.000000 891 91.51500 2188 2827 1 chr1B.!!$F2 639
15 TraesCS4B01G216300 chr7B 382523963 382525589 1626 True 2396.000000 2396 93.24900 2188 3826 1 chr7B.!!$R2 1638
16 TraesCS4B01G216300 chr7B 16918749 16919414 665 True 874.000000 874 90.99100 2188 2827 1 chr7B.!!$R1 639
17 TraesCS4B01G216300 chr7B 524616503 524618219 1716 True 854.500000 1459 90.76050 2188 3342 2 chr7B.!!$R3 1154
18 TraesCS4B01G216300 chr7B 323203113 323205029 1916 False 600.500000 898 90.33300 2187 2827 2 chr7B.!!$F3 640
19 TraesCS4B01G216300 chr3B 785670320 785671960 1640 False 2254.000000 2254 91.89800 2224 3826 1 chr3B.!!$F2 1602
20 TraesCS4B01G216300 chr3B 115799290 115800401 1111 False 202.500000 303 89.17500 6434 6909 2 chr3B.!!$F3 475
21 TraesCS4B01G216300 chr2B 711438095 711439082 987 False 1550.000000 1550 95.05500 2843 3826 1 chr2B.!!$F1 983
22 TraesCS4B01G216300 chr2B 441878399 441879525 1126 True 1485.000000 1485 90.75000 2224 3340 1 chr2B.!!$R1 1116
23 TraesCS4B01G216300 chr2B 195685468 195687203 1735 False 1338.500000 1768 93.63750 2188 3827 2 chr2B.!!$F2 1639
24 TraesCS4B01G216300 chr5D 263147299 263147925 626 False 854.000000 854 91.56100 2190 2805 1 chr5D.!!$F1 615
25 TraesCS4B01G216300 chr3D 607270662 607271202 540 True 728.000000 728 91.12800 319 854 1 chr3D.!!$R4 535
26 TraesCS4B01G216300 chr3A 19769977 19770756 779 True 365.000000 449 93.99500 6433 6910 2 chr3A.!!$R2 477
27 TraesCS4B01G216300 chr6D 362783644 362784625 981 True 265.500000 372 86.03800 6437 6910 2 chr6D.!!$R1 473
28 TraesCS4B01G216300 chr1D 473525480 473526527 1047 False 208.500000 309 91.18650 6439 6909 2 chr1D.!!$F1 470

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
124 125 0.035630 ACTTGCTTCCTGGCTGCTAG 60.036 55.0 5.98 5.98 36.10 3.42 F
192 193 0.107410 CCACGTATGGGCTTTGGCTA 60.107 55.0 0.00 0.00 43.04 3.93 F
243 244 0.108662 TAGCTGAGGCACACACGATG 60.109 55.0 0.00 0.00 41.70 3.84 F
2182 2287 0.180406 AGTGGTGGTGGTGAGTTCAC 59.820 55.0 3.67 3.67 45.72 3.18 F
2183 2288 0.180406 GTGGTGGTGGTGAGTTCACT 59.820 55.0 11.67 0.00 45.73 3.41 F
2184 2289 0.468226 TGGTGGTGGTGAGTTCACTC 59.532 55.0 11.67 0.00 45.73 3.51 F
4152 5066 0.839853 ATGGGCCTAGATCTCCCTGC 60.840 60.0 16.80 8.00 40.69 4.85 F
4166 5080 0.329596 CCCTGCATAAGGCTATCCCC 59.670 60.0 0.00 0.00 45.89 4.81 F
5078 6151 0.961358 ACTCTCGTTCTGGTCTCCCG 60.961 60.0 0.00 0.00 0.00 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1272 1282 2.660553 CTTGCGCTGCGGACAACAAA 62.661 55.000 24.61 3.5 0.00 2.83 R
1979 2082 3.081710 TCCATCACTAACTCCTGACGA 57.918 47.619 0.00 0.0 0.00 4.20 R
2184 2289 3.492137 GCCCATTACGTACTCTAACAGGG 60.492 52.174 0.00 0.0 35.68 4.45 R
3839 4570 2.122768 GATGACTGAGGGAGATTGGGT 58.877 52.381 0.00 0.0 0.00 4.51 R
4036 4950 3.252215 TGCTACGGAACCACAAAAATGAG 59.748 43.478 0.00 0.0 0.00 2.90 R
4166 5080 3.364964 CGCTACAAGGCTGTTTGGTTTAG 60.365 47.826 0.00 0.0 36.96 1.85 R
5628 6732 1.591703 CGCTAGAACCAGCACCTGA 59.408 57.895 0.00 0.0 41.88 3.86 R
5962 7066 1.593787 CAGAGAGGCGTCATGTGGT 59.406 57.895 9.41 0.0 0.00 4.16 R
6969 8950 0.035820 TCATTTTTACGGAGCGGCCT 60.036 50.000 0.00 0.0 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 2.604046 GGTCAGCCGTAGTGAATCAT 57.396 50.000 0.00 0.00 0.00 2.45
42 43 2.906354 GGTCAGCCGTAGTGAATCATT 58.094 47.619 0.00 0.00 0.00 2.57
43 44 3.270877 GGTCAGCCGTAGTGAATCATTT 58.729 45.455 0.00 0.00 0.00 2.32
44 45 4.439057 GGTCAGCCGTAGTGAATCATTTA 58.561 43.478 0.00 0.00 0.00 1.40
45 46 4.270325 GGTCAGCCGTAGTGAATCATTTAC 59.730 45.833 0.00 0.00 0.00 2.01
46 47 4.270325 GTCAGCCGTAGTGAATCATTTACC 59.730 45.833 0.00 0.00 0.00 2.85
47 48 4.081365 TCAGCCGTAGTGAATCATTTACCA 60.081 41.667 0.00 0.00 0.00 3.25
48 49 4.816385 CAGCCGTAGTGAATCATTTACCAT 59.184 41.667 0.00 0.00 0.00 3.55
49 50 4.816385 AGCCGTAGTGAATCATTTACCATG 59.184 41.667 0.00 0.00 0.00 3.66
50 51 4.024048 GCCGTAGTGAATCATTTACCATGG 60.024 45.833 11.19 11.19 0.00 3.66
51 52 5.123227 CCGTAGTGAATCATTTACCATGGT 58.877 41.667 23.55 23.55 0.00 3.55
52 53 6.285224 CCGTAGTGAATCATTTACCATGGTA 58.715 40.000 21.05 21.05 0.00 3.25
53 54 6.934645 CCGTAGTGAATCATTTACCATGGTAT 59.065 38.462 25.12 9.98 0.00 2.73
54 55 7.117812 CCGTAGTGAATCATTTACCATGGTATC 59.882 40.741 25.12 17.84 0.00 2.24
55 56 7.655732 CGTAGTGAATCATTTACCATGGTATCA 59.344 37.037 25.12 20.09 0.00 2.15
56 57 9.507329 GTAGTGAATCATTTACCATGGTATCAT 57.493 33.333 25.12 16.72 0.00 2.45
80 81 5.808366 AAAAAGGGAAAGATTTCAGACCC 57.192 39.130 7.56 0.00 38.92 4.46
81 82 4.469469 AAAGGGAAAGATTTCAGACCCA 57.531 40.909 7.56 0.00 39.73 4.51
82 83 3.441500 AGGGAAAGATTTCAGACCCAC 57.558 47.619 7.56 0.00 39.73 4.61
83 84 2.716424 AGGGAAAGATTTCAGACCCACA 59.284 45.455 7.56 0.00 39.73 4.17
84 85 2.820197 GGGAAAGATTTCAGACCCACAC 59.180 50.000 7.56 0.00 38.92 3.82
85 86 2.820197 GGAAAGATTTCAGACCCACACC 59.180 50.000 7.56 0.00 38.92 4.16
86 87 2.586648 AAGATTTCAGACCCACACCC 57.413 50.000 0.00 0.00 0.00 4.61
87 88 1.444933 AGATTTCAGACCCACACCCA 58.555 50.000 0.00 0.00 0.00 4.51
88 89 1.073923 AGATTTCAGACCCACACCCAC 59.926 52.381 0.00 0.00 0.00 4.61
89 90 0.250727 ATTTCAGACCCACACCCACG 60.251 55.000 0.00 0.00 0.00 4.94
90 91 2.332312 TTTCAGACCCACACCCACGG 62.332 60.000 0.00 0.00 0.00 4.94
91 92 3.238497 CAGACCCACACCCACGGA 61.238 66.667 0.00 0.00 0.00 4.69
92 93 2.446994 AGACCCACACCCACGGAA 60.447 61.111 0.00 0.00 0.00 4.30
93 94 1.846124 AGACCCACACCCACGGAAT 60.846 57.895 0.00 0.00 0.00 3.01
94 95 0.545787 AGACCCACACCCACGGAATA 60.546 55.000 0.00 0.00 0.00 1.75
95 96 0.107848 GACCCACACCCACGGAATAG 60.108 60.000 0.00 0.00 0.00 1.73
96 97 0.545787 ACCCACACCCACGGAATAGA 60.546 55.000 0.00 0.00 0.00 1.98
97 98 0.616371 CCCACACCCACGGAATAGAA 59.384 55.000 0.00 0.00 0.00 2.10
98 99 1.406887 CCCACACCCACGGAATAGAAG 60.407 57.143 0.00 0.00 0.00 2.85
99 100 1.369625 CACACCCACGGAATAGAAGC 58.630 55.000 0.00 0.00 0.00 3.86
100 101 0.981183 ACACCCACGGAATAGAAGCA 59.019 50.000 0.00 0.00 0.00 3.91
101 102 1.066143 ACACCCACGGAATAGAAGCAG 60.066 52.381 0.00 0.00 0.00 4.24
102 103 0.107654 ACCCACGGAATAGAAGCAGC 60.108 55.000 0.00 0.00 0.00 5.25
103 104 1.154205 CCCACGGAATAGAAGCAGCG 61.154 60.000 0.00 0.00 0.00 5.18
104 105 1.638467 CACGGAATAGAAGCAGCGC 59.362 57.895 0.00 0.00 0.00 5.92
105 106 1.083806 CACGGAATAGAAGCAGCGCA 61.084 55.000 11.47 0.00 0.00 6.09
106 107 1.084370 ACGGAATAGAAGCAGCGCAC 61.084 55.000 11.47 0.00 0.00 5.34
107 108 0.807667 CGGAATAGAAGCAGCGCACT 60.808 55.000 11.47 2.96 0.00 4.40
108 109 1.373570 GGAATAGAAGCAGCGCACTT 58.626 50.000 11.47 13.38 0.00 3.16
109 110 1.063174 GGAATAGAAGCAGCGCACTTG 59.937 52.381 18.92 5.59 0.00 3.16
110 111 0.449388 AATAGAAGCAGCGCACTTGC 59.551 50.000 18.92 15.52 41.83 4.01
115 116 3.360340 GCAGCGCACTTGCTTCCT 61.360 61.111 11.47 0.00 44.46 3.36
116 117 2.559840 CAGCGCACTTGCTTCCTG 59.440 61.111 11.47 0.04 44.46 3.86
117 118 2.670934 AGCGCACTTGCTTCCTGG 60.671 61.111 11.47 0.00 44.46 4.45
118 119 4.410743 GCGCACTTGCTTCCTGGC 62.411 66.667 0.30 0.00 39.32 4.85
119 120 2.670934 CGCACTTGCTTCCTGGCT 60.671 61.111 0.00 0.00 39.32 4.75
120 121 2.960170 GCACTTGCTTCCTGGCTG 59.040 61.111 0.00 0.00 38.21 4.85
121 122 2.960170 CACTTGCTTCCTGGCTGC 59.040 61.111 0.00 0.00 0.00 5.25
122 123 1.602888 CACTTGCTTCCTGGCTGCT 60.603 57.895 0.00 0.00 0.00 4.24
123 124 0.321919 CACTTGCTTCCTGGCTGCTA 60.322 55.000 0.00 0.00 0.00 3.49
124 125 0.035630 ACTTGCTTCCTGGCTGCTAG 60.036 55.000 5.98 5.98 36.10 3.42
125 126 0.747283 CTTGCTTCCTGGCTGCTAGG 60.747 60.000 24.56 24.56 36.63 3.02
126 127 2.191641 GCTTCCTGGCTGCTAGGG 59.808 66.667 28.69 16.43 35.96 3.53
127 128 2.370445 GCTTCCTGGCTGCTAGGGA 61.370 63.158 28.69 21.46 35.96 4.20
128 129 1.828768 CTTCCTGGCTGCTAGGGAG 59.171 63.158 28.69 26.35 34.68 4.30
129 130 1.690633 TTCCTGGCTGCTAGGGAGG 60.691 63.158 28.69 12.61 35.96 4.30
130 131 2.366167 CCTGGCTGCTAGGGAGGT 60.366 66.667 23.05 0.00 0.00 3.85
131 132 1.997874 CCTGGCTGCTAGGGAGGTT 60.998 63.158 23.05 0.00 0.00 3.50
132 133 1.566298 CCTGGCTGCTAGGGAGGTTT 61.566 60.000 23.05 0.00 0.00 3.27
133 134 0.393537 CTGGCTGCTAGGGAGGTTTG 60.394 60.000 4.94 0.00 0.00 2.93
134 135 1.750780 GGCTGCTAGGGAGGTTTGC 60.751 63.158 0.00 0.00 0.00 3.68
135 136 2.109126 GCTGCTAGGGAGGTTTGCG 61.109 63.158 0.00 0.00 0.00 4.85
136 137 1.450312 CTGCTAGGGAGGTTTGCGG 60.450 63.158 0.00 0.00 0.00 5.69
137 138 1.899437 CTGCTAGGGAGGTTTGCGGA 61.899 60.000 0.00 0.00 32.29 5.54
138 139 1.153349 GCTAGGGAGGTTTGCGGAG 60.153 63.158 0.00 0.00 0.00 4.63
139 140 1.522569 CTAGGGAGGTTTGCGGAGG 59.477 63.158 0.00 0.00 0.00 4.30
140 141 2.595009 CTAGGGAGGTTTGCGGAGGC 62.595 65.000 0.00 0.00 40.52 4.70
142 143 4.344865 GGAGGTTTGCGGAGGCCA 62.345 66.667 5.01 0.00 38.85 5.36
143 144 3.056328 GAGGTTTGCGGAGGCCAC 61.056 66.667 5.01 0.00 38.85 5.01
147 148 4.572571 TTTGCGGAGGCCACGGTT 62.573 61.111 19.47 0.00 38.85 4.44
151 152 4.760047 CGGAGGCCACGGTTGAGG 62.760 72.222 5.01 0.00 0.00 3.86
152 153 3.319198 GGAGGCCACGGTTGAGGA 61.319 66.667 5.01 0.00 0.00 3.71
153 154 2.266055 GAGGCCACGGTTGAGGAG 59.734 66.667 5.01 0.00 0.00 3.69
154 155 3.959991 GAGGCCACGGTTGAGGAGC 62.960 68.421 5.01 0.00 0.00 4.70
170 171 2.815211 GCGAGAAGCGATGGTGCA 60.815 61.111 0.00 0.00 44.57 4.57
171 172 2.806856 GCGAGAAGCGATGGTGCAG 61.807 63.158 0.00 0.00 44.57 4.41
172 173 2.169789 CGAGAAGCGATGGTGCAGG 61.170 63.158 0.00 0.00 44.57 4.85
173 174 2.437359 AGAAGCGATGGTGCAGGC 60.437 61.111 0.00 0.00 37.31 4.85
174 175 3.512516 GAAGCGATGGTGCAGGCC 61.513 66.667 0.00 0.00 37.31 5.19
175 176 4.349503 AAGCGATGGTGCAGGCCA 62.350 61.111 5.01 0.00 43.48 5.36
179 180 2.267642 GATGGTGCAGGCCACGTA 59.732 61.111 5.01 0.00 45.62 3.57
180 181 1.153168 GATGGTGCAGGCCACGTAT 60.153 57.895 5.01 0.00 45.62 3.06
181 182 1.439353 GATGGTGCAGGCCACGTATG 61.439 60.000 5.01 0.00 45.62 2.39
190 191 3.196648 CCACGTATGGGCTTTGGC 58.803 61.111 0.00 0.00 43.04 4.52
191 192 1.378514 CCACGTATGGGCTTTGGCT 60.379 57.895 0.00 0.00 43.04 4.75
192 193 0.107410 CCACGTATGGGCTTTGGCTA 60.107 55.000 0.00 0.00 43.04 3.93
216 217 2.615912 GAGAAATGAAGCGAAGGATGGG 59.384 50.000 0.00 0.00 0.00 4.00
241 242 0.173481 GATAGCTGAGGCACACACGA 59.827 55.000 0.00 0.00 41.70 4.35
243 244 0.108662 TAGCTGAGGCACACACGATG 60.109 55.000 0.00 0.00 41.70 3.84
261 262 1.511850 TGGCTGATTCAGTTGTGTCG 58.488 50.000 14.90 0.00 33.43 4.35
295 296 2.310233 GCTGCACTTCACGAGCGAA 61.310 57.895 0.00 0.00 31.26 4.70
328 329 1.341531 CAAACACGAGGGAGACTCAGT 59.658 52.381 4.53 0.00 46.98 3.41
341 342 4.144297 GAGACTCAGTGATGGATAGCTCT 58.856 47.826 0.00 0.00 0.00 4.09
405 406 2.432972 CATGGCGGCAAAAGTGGC 60.433 61.111 18.31 0.00 46.67 5.01
427 428 2.574399 GTGTCGTCCTGAGAGGCC 59.426 66.667 0.00 0.00 34.61 5.19
542 544 5.069648 CCAACTAGCAGGAGAGATCAATGTA 59.930 44.000 0.00 0.00 0.00 2.29
557 559 7.437748 AGATCAATGTACATAAGCTACACCTC 58.562 38.462 9.21 0.00 0.00 3.85
617 619 1.446272 GGACAAGAACCTCTCGGCG 60.446 63.158 0.00 0.00 0.00 6.46
674 676 0.884704 GTGGCTTCAGCGAGGTGAAA 60.885 55.000 16.85 2.17 43.26 2.69
703 705 1.862827 GGTACGACGTTCAGCAAACTT 59.137 47.619 5.50 0.00 35.59 2.66
725 727 6.201806 ACTTCGCTGCTCATAAATTAGCTAAG 59.798 38.462 12.54 0.00 40.71 2.18
731 733 7.374975 TGCTCATAAATTAGCTAAGGTAGGT 57.625 36.000 12.54 0.00 39.53 3.08
732 734 7.217200 TGCTCATAAATTAGCTAAGGTAGGTG 58.783 38.462 12.54 9.60 39.53 4.00
737 739 8.867097 CATAAATTAGCTAAGGTAGGTGTAGGA 58.133 37.037 12.54 0.00 37.70 2.94
743 745 4.630676 GCTAAGGTAGGTGTAGGAGAGGAA 60.631 50.000 0.00 0.00 0.00 3.36
772 774 3.283259 GCTTTGGCTTATGGTACCTCT 57.717 47.619 14.36 3.00 35.22 3.69
818 820 6.945435 TCTCAGATGAGATCCCAGACTATTAC 59.055 42.308 8.46 0.00 45.48 1.89
837 839 6.963049 ATTACTAGATAAATAAAGCGGCGG 57.037 37.500 9.78 0.00 0.00 6.13
956 963 2.979814 TCCTCGTCTCTCTCTCTCTG 57.020 55.000 0.00 0.00 0.00 3.35
1233 1243 0.958382 TTCCCGTTCCAGAAATGCCG 60.958 55.000 0.00 0.00 0.00 5.69
1234 1244 2.406616 CCCGTTCCAGAAATGCCGG 61.407 63.158 0.00 0.00 35.32 6.13
1272 1282 1.348036 GGAAGCCGGATGTAATAGCCT 59.652 52.381 5.05 0.00 30.73 4.58
1458 1470 5.118990 GGAGCTTACTGATTGATGTTGCTA 58.881 41.667 0.00 0.00 0.00 3.49
1639 1651 5.699458 ACTCGTGTCTTTGTTTAGTATTGGG 59.301 40.000 0.00 0.00 0.00 4.12
1640 1652 5.856156 TCGTGTCTTTGTTTAGTATTGGGA 58.144 37.500 0.00 0.00 0.00 4.37
1641 1653 5.929992 TCGTGTCTTTGTTTAGTATTGGGAG 59.070 40.000 0.00 0.00 0.00 4.30
1861 1961 0.758310 TTGCCTGTGCCACCATGAAA 60.758 50.000 0.00 0.00 36.33 2.69
1900 2003 8.303876 GCCTACTTGATTTGTGGAAAATTCTAA 58.696 33.333 0.00 0.00 0.00 2.10
1983 2086 6.593770 TGCATTATAACCATATGGATGTCGTC 59.406 38.462 28.77 10.66 38.94 4.20
2084 2187 5.105473 TCCTTGTTCCGTTTATAGAGTGGAG 60.105 44.000 0.00 0.00 0.00 3.86
2182 2287 0.180406 AGTGGTGGTGGTGAGTTCAC 59.820 55.000 3.67 3.67 45.72 3.18
2183 2288 0.180406 GTGGTGGTGGTGAGTTCACT 59.820 55.000 11.67 0.00 45.73 3.41
2184 2289 0.468226 TGGTGGTGGTGAGTTCACTC 59.532 55.000 11.67 0.00 45.73 3.51
2883 3271 4.996434 GACACCGCAGCAGCCACT 62.996 66.667 0.00 0.00 37.52 4.00
2983 3371 2.591753 CAGGGCGTCCACATCCAT 59.408 61.111 9.71 0.00 34.83 3.41
3839 4570 1.633432 CATAACACTCCCCCACTCCAA 59.367 52.381 0.00 0.00 0.00 3.53
3885 4616 1.133668 CCCATGAGACCCCTCCAATTC 60.134 57.143 0.00 0.00 38.66 2.17
3889 4620 1.982226 TGAGACCCCTCCAATTCGAAA 59.018 47.619 0.00 0.00 38.66 3.46
3937 4844 2.885644 CGTCGCTGCCGCAGTTAT 60.886 61.111 21.29 0.00 35.30 1.89
3970 4877 3.132646 TGTTGGCTGCTTGATTGAGTTTT 59.867 39.130 0.00 0.00 0.00 2.43
3971 4878 3.374220 TGGCTGCTTGATTGAGTTTTG 57.626 42.857 0.00 0.00 0.00 2.44
3972 4879 2.957680 TGGCTGCTTGATTGAGTTTTGA 59.042 40.909 0.00 0.00 0.00 2.69
3973 4880 3.005050 TGGCTGCTTGATTGAGTTTTGAG 59.995 43.478 0.00 0.00 0.00 3.02
3974 4881 3.005155 GGCTGCTTGATTGAGTTTTGAGT 59.995 43.478 0.00 0.00 0.00 3.41
3975 4882 4.500375 GGCTGCTTGATTGAGTTTTGAGTT 60.500 41.667 0.00 0.00 0.00 3.01
3976 4883 5.045872 GCTGCTTGATTGAGTTTTGAGTTT 58.954 37.500 0.00 0.00 0.00 2.66
3977 4884 5.174579 GCTGCTTGATTGAGTTTTGAGTTTC 59.825 40.000 0.00 0.00 0.00 2.78
4152 5066 0.839853 ATGGGCCTAGATCTCCCTGC 60.840 60.000 16.80 8.00 40.69 4.85
4166 5080 0.329596 CCCTGCATAAGGCTATCCCC 59.670 60.000 0.00 0.00 45.89 4.81
4237 5152 5.009710 CGTACCAACATAAGCCTGAGATCTA 59.990 44.000 0.00 0.00 0.00 1.98
4282 5197 5.666969 TGTTTACTGTGTGCACTTATGAC 57.333 39.130 19.41 7.89 0.00 3.06
4296 5211 4.860907 CACTTATGACTTGAAGCAAATGGC 59.139 41.667 0.00 0.00 45.30 4.40
4363 5278 2.936919 TCCAAGATGCACTGTTCTGT 57.063 45.000 0.00 0.00 0.00 3.41
4634 5700 7.435488 AGTCGATTTATGCATCACTAGTACAAC 59.565 37.037 0.19 0.00 0.00 3.32
4637 5704 5.585820 TTATGCATCACTAGTACAACGGA 57.414 39.130 0.19 0.00 0.00 4.69
4735 5802 3.030291 ACCTTGTGAATGTTTGCCTTGA 58.970 40.909 0.00 0.00 0.00 3.02
4933 6000 3.467374 TGCGGATATTGCATGAGTACA 57.533 42.857 0.00 0.00 37.44 2.90
5011 6084 9.382275 GTTTTACTAATGAAATGGAAATGGCAT 57.618 29.630 0.00 0.00 0.00 4.40
5015 6088 8.076910 ACTAATGAAATGGAAATGGCATAACA 57.923 30.769 0.00 0.31 0.00 2.41
5016 6089 8.707449 ACTAATGAAATGGAAATGGCATAACAT 58.293 29.630 0.00 2.97 0.00 2.71
5017 6090 7.795482 AATGAAATGGAAATGGCATAACATG 57.205 32.000 0.00 0.00 0.00 3.21
5055 6128 5.184096 TGTTTTCCTACTGCAACTGTTTGAA 59.816 36.000 0.00 0.00 34.24 2.69
5078 6151 0.961358 ACTCTCGTTCTGGTCTCCCG 60.961 60.000 0.00 0.00 0.00 5.14
5141 6214 6.126568 TGTACTTGCAACAAGTAGGTTTTC 57.873 37.500 17.97 8.05 33.81 2.29
5144 6217 7.553402 TGTACTTGCAACAAGTAGGTTTTCTTA 59.447 33.333 17.97 0.00 33.81 2.10
5221 6294 1.884579 CCACATTCACAGCAAGCTCTT 59.115 47.619 0.00 0.00 0.00 2.85
5242 6315 7.359014 GCTCTTTGATTTTCTTTGCTCATTCAC 60.359 37.037 0.00 0.00 0.00 3.18
5419 6523 8.584157 ACTTTTTAATGTGGCTGTTCATTCATA 58.416 29.630 0.00 0.00 36.06 2.15
5425 6529 2.507058 TGGCTGTTCATTCATAGGAGCT 59.493 45.455 0.00 0.00 0.00 4.09
5475 6579 7.282585 CCTTTTCAATCTATGGGATCACAGTA 58.717 38.462 2.98 0.00 32.76 2.74
5531 6635 6.016360 CCTGATTGTCCAAAATGTGTTCTGTA 60.016 38.462 0.00 0.00 0.00 2.74
5579 6683 5.044846 ACTTGGATTAAATAGGTCCTGCAGT 60.045 40.000 13.81 0.00 33.15 4.40
5596 6700 2.615912 GCAGTTGTCCATGGCTTAGATC 59.384 50.000 6.96 0.00 0.00 2.75
5603 6707 7.836183 AGTTGTCCATGGCTTAGATCTTAATTT 59.164 33.333 6.96 0.00 0.00 1.82
5628 6732 6.739331 TTTCACCCATCCTGTTTATTTGTT 57.261 33.333 0.00 0.00 0.00 2.83
5645 6749 1.270839 TGTTCAGGTGCTGGTTCTAGC 60.271 52.381 1.27 1.27 43.95 3.42
5798 6902 6.908825 TCTCGACTATTTTGTTTGGATTTGG 58.091 36.000 0.00 0.00 0.00 3.28
5825 6929 6.260050 TGTGTTATCACCAGTGAGAAGTTTTC 59.740 38.462 8.04 0.00 40.87 2.29
5840 6944 6.784031 AGAAGTTTTCTCTCTCTCTCTCTCT 58.216 40.000 0.00 0.00 34.07 3.10
5841 6945 6.881602 AGAAGTTTTCTCTCTCTCTCTCTCTC 59.118 42.308 0.00 0.00 34.07 3.20
5843 6947 6.410540 AGTTTTCTCTCTCTCTCTCTCTCTC 58.589 44.000 0.00 0.00 0.00 3.20
5844 6948 6.214412 AGTTTTCTCTCTCTCTCTCTCTCTCT 59.786 42.308 0.00 0.00 0.00 3.10
5845 6949 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
5846 6950 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
5847 6951 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5848 6952 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5849 6953 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5850 6954 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5851 6955 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5852 6956 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5853 6957 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5854 6958 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5855 6959 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5856 6960 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5962 7066 5.483937 ACACACCTATCTGATGGAGTACAAA 59.516 40.000 2.20 0.00 0.00 2.83
5977 7081 0.108585 ACAAACCACATGACGCCTCT 59.891 50.000 0.00 0.00 0.00 3.69
6054 7158 3.010420 GTCAAAACTAGTCATGGCCCTC 58.990 50.000 0.00 0.00 0.00 4.30
6064 7168 2.291043 ATGGCCCTCGTTCCGAACT 61.291 57.895 9.55 0.00 34.74 3.01
6065 7169 0.974010 ATGGCCCTCGTTCCGAACTA 60.974 55.000 9.55 0.00 34.74 2.24
6066 7170 1.153686 GGCCCTCGTTCCGAACTAC 60.154 63.158 9.55 0.00 34.74 2.73
6067 7171 1.588082 GCCCTCGTTCCGAACTACA 59.412 57.895 9.55 0.00 34.74 2.74
6068 7172 0.458025 GCCCTCGTTCCGAACTACAG 60.458 60.000 9.55 2.94 34.74 2.74
6121 7225 2.509131 TCAACCCAGCCATGATGTATGA 59.491 45.455 0.00 0.00 39.21 2.15
6195 7300 4.312443 TCGACTTTTATGATATTCGCCCC 58.688 43.478 0.00 0.00 0.00 5.80
6230 7335 2.097056 GTCGACTCGTTTTGGCAACTAC 60.097 50.000 8.70 0.04 37.61 2.73
6232 7337 2.155155 CGACTCGTTTTGGCAACTACTC 59.845 50.000 0.00 0.00 37.61 2.59
6233 7338 2.479275 GACTCGTTTTGGCAACTACTCC 59.521 50.000 0.00 0.00 37.61 3.85
6235 7340 1.202557 TCGTTTTGGCAACTACTCCGT 60.203 47.619 0.00 0.00 37.61 4.69
6236 7341 2.035704 TCGTTTTGGCAACTACTCCGTA 59.964 45.455 0.00 0.00 37.61 4.02
6237 7342 2.997986 CGTTTTGGCAACTACTCCGTAT 59.002 45.455 0.00 0.00 37.61 3.06
6238 7343 3.434299 CGTTTTGGCAACTACTCCGTATT 59.566 43.478 0.00 0.00 37.61 1.89
6239 7344 4.083696 CGTTTTGGCAACTACTCCGTATTT 60.084 41.667 0.00 0.00 37.61 1.40
6241 7346 6.540205 GTTTTGGCAACTACTCCGTATTTAG 58.460 40.000 0.00 0.00 37.61 1.85
6242 7347 4.395959 TGGCAACTACTCCGTATTTAGG 57.604 45.455 0.00 0.00 37.61 2.69
6244 7349 4.117685 GGCAACTACTCCGTATTTAGGTG 58.882 47.826 0.00 0.00 34.23 4.00
6245 7350 4.142093 GGCAACTACTCCGTATTTAGGTGA 60.142 45.833 0.00 0.00 33.08 4.02
6246 7351 5.413499 GCAACTACTCCGTATTTAGGTGAA 58.587 41.667 0.00 0.00 33.08 3.18
6247 7352 5.519206 GCAACTACTCCGTATTTAGGTGAAG 59.481 44.000 0.00 0.00 33.08 3.02
6248 7353 6.626623 GCAACTACTCCGTATTTAGGTGAAGA 60.627 42.308 0.00 0.00 33.08 2.87
6249 7354 7.318141 CAACTACTCCGTATTTAGGTGAAGAA 58.682 38.462 0.00 0.00 33.08 2.52
6250 7355 7.472334 ACTACTCCGTATTTAGGTGAAGAAA 57.528 36.000 0.00 0.00 0.00 2.52
6251 7356 7.318893 ACTACTCCGTATTTAGGTGAAGAAAC 58.681 38.462 0.00 0.00 0.00 2.78
6252 7357 5.485620 ACTCCGTATTTAGGTGAAGAAACC 58.514 41.667 0.00 0.00 40.85 3.27
6316 7421 4.743057 TGACAAGTACTCCAGGATGATG 57.257 45.455 0.00 0.00 39.69 3.07
6326 7431 5.622180 ACTCCAGGATGATGATTGAATCTG 58.378 41.667 6.73 0.00 39.69 2.90
6332 7437 5.076039 AGGATGATGATTGAATCTGGGGAAT 59.924 40.000 6.73 0.00 0.00 3.01
6337 7442 5.197224 TGATTGAATCTGGGGAATGTCTT 57.803 39.130 6.73 0.00 0.00 3.01
6350 7455 3.551551 GAATGTCTTAACACACGGTTGC 58.448 45.455 0.00 0.00 40.73 4.17
6362 7467 0.179094 ACGGTTGCGTCTTTCAGACA 60.179 50.000 4.82 0.00 45.30 3.41
6371 7476 1.000506 GTCTTTCAGACAGCACCGGTA 59.999 52.381 6.87 0.00 44.45 4.02
6372 7477 1.000506 TCTTTCAGACAGCACCGGTAC 59.999 52.381 6.87 0.00 0.00 3.34
6388 7494 1.808343 GGTACCCTTACCAGCAAAACG 59.192 52.381 0.00 0.00 46.59 3.60
6427 7533 9.229784 CATATTTTTAATCAGTAGCACAGCAAG 57.770 33.333 0.00 0.00 0.00 4.01
6429 7535 6.486253 TTTTAATCAGTAGCACAGCAAGAG 57.514 37.500 0.00 0.00 0.00 2.85
6558 8023 7.498900 GTCATCAATGATGGTATTAGGTGTTCA 59.501 37.037 21.58 0.00 40.15 3.18
6588 8053 1.808411 TGAGTTTGATCTTGCGACCC 58.192 50.000 0.00 0.00 0.00 4.46
6632 8600 8.981647 CAAAATCCTTTCCAGAAGTTTAACATG 58.018 33.333 0.00 0.00 0.00 3.21
6652 8620 8.725606 AACATGCATAAACCCCAATATAATCT 57.274 30.769 0.00 0.00 0.00 2.40
6653 8621 8.125978 ACATGCATAAACCCCAATATAATCTG 57.874 34.615 0.00 0.00 0.00 2.90
6666 8634 9.857656 CCCAATATAATCTGCCTACATGATTAT 57.142 33.333 0.00 10.82 42.48 1.28
6800 8771 4.202030 CCGAAACTGAGACTCACTATACCC 60.202 50.000 0.00 0.00 0.00 3.69
6816 8787 0.940452 ACCCATGCCCAATCCCATTA 59.060 50.000 0.00 0.00 0.00 1.90
6832 8803 1.396996 CATTAACGTTCCCTTCCTGCG 59.603 52.381 2.82 0.00 0.00 5.18
6877 8858 2.393768 GGTGCCAGTCATCACGCTG 61.394 63.158 0.00 0.00 34.20 5.18
6910 8891 9.395707 GCAAATTGCTGAAGATATGAGATTTAG 57.604 33.333 11.19 0.00 40.96 1.85
6911 8892 9.894783 CAAATTGCTGAAGATATGAGATTTAGG 57.105 33.333 0.00 0.00 0.00 2.69
6912 8893 7.684937 ATTGCTGAAGATATGAGATTTAGGC 57.315 36.000 0.00 0.00 0.00 3.93
6913 8894 5.555017 TGCTGAAGATATGAGATTTAGGCC 58.445 41.667 0.00 0.00 0.00 5.19
6914 8895 5.072193 TGCTGAAGATATGAGATTTAGGCCA 59.928 40.000 5.01 0.00 0.00 5.36
6915 8896 6.179040 GCTGAAGATATGAGATTTAGGCCAT 58.821 40.000 5.01 0.00 0.00 4.40
6916 8897 6.093771 GCTGAAGATATGAGATTTAGGCCATG 59.906 42.308 5.01 0.00 0.00 3.66
6917 8898 7.083062 TGAAGATATGAGATTTAGGCCATGT 57.917 36.000 5.01 0.00 0.00 3.21
6918 8899 7.520798 TGAAGATATGAGATTTAGGCCATGTT 58.479 34.615 5.01 0.00 0.00 2.71
6919 8900 7.663081 TGAAGATATGAGATTTAGGCCATGTTC 59.337 37.037 5.01 0.23 0.00 3.18
6920 8901 6.169094 AGATATGAGATTTAGGCCATGTTCG 58.831 40.000 5.01 0.00 0.00 3.95
6921 8902 2.917933 TGAGATTTAGGCCATGTTCGG 58.082 47.619 5.01 0.00 0.00 4.30
6922 8903 2.503765 TGAGATTTAGGCCATGTTCGGA 59.496 45.455 5.01 0.00 0.00 4.55
6923 8904 3.054728 TGAGATTTAGGCCATGTTCGGAA 60.055 43.478 5.01 0.00 0.00 4.30
6924 8905 4.137543 GAGATTTAGGCCATGTTCGGAAT 58.862 43.478 5.01 0.00 0.00 3.01
6925 8906 4.137543 AGATTTAGGCCATGTTCGGAATC 58.862 43.478 5.01 2.71 0.00 2.52
6926 8907 2.341846 TTAGGCCATGTTCGGAATCC 57.658 50.000 5.01 0.00 0.00 3.01
6927 8908 1.208706 TAGGCCATGTTCGGAATCCA 58.791 50.000 5.01 0.00 0.00 3.41
6928 8909 0.552848 AGGCCATGTTCGGAATCCAT 59.447 50.000 5.01 0.00 0.00 3.41
6929 8910 0.954452 GGCCATGTTCGGAATCCATC 59.046 55.000 0.00 0.00 0.00 3.51
6930 8911 1.679139 GCCATGTTCGGAATCCATCA 58.321 50.000 0.00 0.00 0.00 3.07
6931 8912 1.334869 GCCATGTTCGGAATCCATCAC 59.665 52.381 0.00 0.00 0.00 3.06
6932 8913 2.642427 CCATGTTCGGAATCCATCACA 58.358 47.619 0.00 0.00 0.00 3.58
6933 8914 3.216800 CCATGTTCGGAATCCATCACAT 58.783 45.455 0.00 1.14 0.00 3.21
6934 8915 3.251729 CCATGTTCGGAATCCATCACATC 59.748 47.826 0.00 0.00 0.00 3.06
6935 8916 2.917933 TGTTCGGAATCCATCACATCC 58.082 47.619 0.00 0.00 0.00 3.51
6936 8917 2.238395 TGTTCGGAATCCATCACATCCA 59.762 45.455 0.00 0.00 32.08 3.41
6937 8918 2.614057 GTTCGGAATCCATCACATCCAC 59.386 50.000 0.00 0.00 32.08 4.02
6938 8919 2.118679 TCGGAATCCATCACATCCACT 58.881 47.619 0.00 0.00 32.08 4.00
6939 8920 2.103094 TCGGAATCCATCACATCCACTC 59.897 50.000 0.00 0.00 32.08 3.51
6940 8921 2.808202 CGGAATCCATCACATCCACTCC 60.808 54.545 0.00 0.00 32.08 3.85
6941 8922 2.487934 GAATCCATCACATCCACTCCG 58.512 52.381 0.00 0.00 0.00 4.63
6942 8923 1.793414 ATCCATCACATCCACTCCGA 58.207 50.000 0.00 0.00 0.00 4.55
6943 8924 0.824109 TCCATCACATCCACTCCGAC 59.176 55.000 0.00 0.00 0.00 4.79
6944 8925 0.826715 CCATCACATCCACTCCGACT 59.173 55.000 0.00 0.00 0.00 4.18
6945 8926 1.202463 CCATCACATCCACTCCGACTC 60.202 57.143 0.00 0.00 0.00 3.36
6946 8927 1.115467 ATCACATCCACTCCGACTCC 58.885 55.000 0.00 0.00 0.00 3.85
6947 8928 1.139734 CACATCCACTCCGACTCCG 59.860 63.158 0.00 0.00 0.00 4.63
6948 8929 2.105128 CATCCACTCCGACTCCGC 59.895 66.667 0.00 0.00 0.00 5.54
6949 8930 3.518998 ATCCACTCCGACTCCGCG 61.519 66.667 0.00 0.00 0.00 6.46
6954 8935 4.421479 CTCCGACTCCGCGCAGTT 62.421 66.667 3.16 0.00 0.00 3.16
6955 8936 4.717629 TCCGACTCCGCGCAGTTG 62.718 66.667 10.67 10.67 0.00 3.16
6957 8938 3.767230 CGACTCCGCGCAGTTGTG 61.767 66.667 3.16 0.00 0.00 3.33
6958 8939 3.414700 GACTCCGCGCAGTTGTGG 61.415 66.667 3.16 0.00 40.98 4.17
6959 8940 3.858868 GACTCCGCGCAGTTGTGGA 62.859 63.158 3.16 3.39 45.94 4.02
6963 8944 3.782244 CGCGCAGTTGTGGAGCTC 61.782 66.667 8.75 4.71 0.00 4.09
6964 8945 2.666190 GCGCAGTTGTGGAGCTCA 60.666 61.111 17.19 0.00 0.00 4.26
6965 8946 2.675056 GCGCAGTTGTGGAGCTCAG 61.675 63.158 17.19 0.00 0.00 3.35
6966 8947 1.301244 CGCAGTTGTGGAGCTCAGT 60.301 57.895 17.19 0.00 0.00 3.41
6967 8948 0.882042 CGCAGTTGTGGAGCTCAGTT 60.882 55.000 17.19 0.00 0.00 3.16
6968 8949 1.312815 GCAGTTGTGGAGCTCAGTTT 58.687 50.000 17.19 0.00 0.00 2.66
6969 8950 2.494059 GCAGTTGTGGAGCTCAGTTTA 58.506 47.619 17.19 0.00 0.00 2.01
6970 8951 2.481952 GCAGTTGTGGAGCTCAGTTTAG 59.518 50.000 17.19 0.45 0.00 1.85
6971 8952 3.070018 CAGTTGTGGAGCTCAGTTTAGG 58.930 50.000 17.19 0.00 0.00 2.69
6972 8953 1.807142 GTTGTGGAGCTCAGTTTAGGC 59.193 52.381 17.19 0.00 0.00 3.93
6973 8954 0.324943 TGTGGAGCTCAGTTTAGGCC 59.675 55.000 17.19 0.00 0.00 5.19
6974 8955 0.741221 GTGGAGCTCAGTTTAGGCCG 60.741 60.000 17.19 0.00 0.00 6.13
6975 8956 1.815840 GGAGCTCAGTTTAGGCCGC 60.816 63.158 17.19 0.00 0.00 6.53
6976 8957 1.219393 GAGCTCAGTTTAGGCCGCT 59.781 57.895 9.40 0.00 0.00 5.52
6977 8958 0.808060 GAGCTCAGTTTAGGCCGCTC 60.808 60.000 9.40 8.89 37.35 5.03
6978 8959 1.815840 GCTCAGTTTAGGCCGCTCC 60.816 63.158 0.00 0.00 0.00 4.70
6979 8960 1.519455 CTCAGTTTAGGCCGCTCCG 60.519 63.158 0.00 0.00 40.77 4.63
6980 8961 2.227089 CTCAGTTTAGGCCGCTCCGT 62.227 60.000 0.00 0.00 40.77 4.69
6981 8962 0.966875 TCAGTTTAGGCCGCTCCGTA 60.967 55.000 0.00 0.00 40.77 4.02
6982 8963 0.108520 CAGTTTAGGCCGCTCCGTAA 60.109 55.000 0.00 0.00 40.77 3.18
6983 8964 0.609662 AGTTTAGGCCGCTCCGTAAA 59.390 50.000 0.00 0.00 40.77 2.01
6984 8965 1.002315 AGTTTAGGCCGCTCCGTAAAA 59.998 47.619 0.00 0.00 40.77 1.52
6985 8966 1.805943 GTTTAGGCCGCTCCGTAAAAA 59.194 47.619 0.00 0.00 40.77 1.94
6986 8967 2.406596 TTAGGCCGCTCCGTAAAAAT 57.593 45.000 0.00 0.00 40.77 1.82
6987 8968 1.658994 TAGGCCGCTCCGTAAAAATG 58.341 50.000 0.00 0.00 40.77 2.32
6988 8969 0.035820 AGGCCGCTCCGTAAAAATGA 60.036 50.000 0.00 0.00 40.77 2.57
6989 8970 0.377203 GGCCGCTCCGTAAAAATGAG 59.623 55.000 0.00 0.00 0.00 2.90
6990 8971 0.248094 GCCGCTCCGTAAAAATGAGC 60.248 55.000 0.00 0.00 46.21 4.26
6996 8977 3.804873 GCTCCGTAAAAATGAGCTAGAGG 59.195 47.826 0.00 0.00 46.19 3.69
6997 8978 3.793559 TCCGTAAAAATGAGCTAGAGGC 58.206 45.455 0.00 0.00 42.19 4.70
7007 8988 3.027292 CTAGAGGCTCGTCCGCTC 58.973 66.667 9.22 0.00 41.47 5.03
7008 8989 2.516460 TAGAGGCTCGTCCGCTCC 60.516 66.667 9.22 0.00 41.47 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.604046 ATGATTCACTACGGCTGACC 57.396 50.000 0.00 0.00 0.00 4.02
23 24 4.270325 GGTAAATGATTCACTACGGCTGAC 59.730 45.833 0.00 0.00 0.00 3.51
24 25 4.081365 TGGTAAATGATTCACTACGGCTGA 60.081 41.667 0.00 0.00 0.00 4.26
25 26 4.188462 TGGTAAATGATTCACTACGGCTG 58.812 43.478 0.00 0.00 0.00 4.85
26 27 4.481368 TGGTAAATGATTCACTACGGCT 57.519 40.909 0.00 0.00 0.00 5.52
27 28 4.024048 CCATGGTAAATGATTCACTACGGC 60.024 45.833 2.57 0.00 0.00 5.68
28 29 5.123227 ACCATGGTAAATGATTCACTACGG 58.877 41.667 18.10 0.00 0.00 4.02
29 30 7.655732 TGATACCATGGTAAATGATTCACTACG 59.344 37.037 27.93 0.00 33.99 3.51
30 31 8.902540 TGATACCATGGTAAATGATTCACTAC 57.097 34.615 27.93 0.77 33.99 2.73
58 59 5.070446 GTGGGTCTGAAATCTTTCCCTTTTT 59.930 40.000 0.00 0.00 36.36 1.94
59 60 4.588951 GTGGGTCTGAAATCTTTCCCTTTT 59.411 41.667 0.00 0.00 36.36 2.27
60 61 4.152647 GTGGGTCTGAAATCTTTCCCTTT 58.847 43.478 0.00 0.00 36.36 3.11
61 62 3.140144 TGTGGGTCTGAAATCTTTCCCTT 59.860 43.478 0.00 0.00 36.36 3.95
62 63 2.716424 TGTGGGTCTGAAATCTTTCCCT 59.284 45.455 0.00 0.00 36.36 4.20
63 64 2.820197 GTGTGGGTCTGAAATCTTTCCC 59.180 50.000 0.48 0.00 36.36 3.97
64 65 2.820197 GGTGTGGGTCTGAAATCTTTCC 59.180 50.000 0.48 0.00 36.36 3.13
65 66 2.820197 GGGTGTGGGTCTGAAATCTTTC 59.180 50.000 0.00 0.00 37.69 2.62
66 67 2.176798 TGGGTGTGGGTCTGAAATCTTT 59.823 45.455 0.00 0.00 0.00 2.52
67 68 1.780309 TGGGTGTGGGTCTGAAATCTT 59.220 47.619 0.00 0.00 0.00 2.40
68 69 1.073923 GTGGGTGTGGGTCTGAAATCT 59.926 52.381 0.00 0.00 0.00 2.40
69 70 1.534729 GTGGGTGTGGGTCTGAAATC 58.465 55.000 0.00 0.00 0.00 2.17
70 71 0.250727 CGTGGGTGTGGGTCTGAAAT 60.251 55.000 0.00 0.00 0.00 2.17
71 72 1.147376 CGTGGGTGTGGGTCTGAAA 59.853 57.895 0.00 0.00 0.00 2.69
72 73 2.813726 CCGTGGGTGTGGGTCTGAA 61.814 63.158 0.00 0.00 0.00 3.02
73 74 3.238497 CCGTGGGTGTGGGTCTGA 61.238 66.667 0.00 0.00 0.00 3.27
74 75 2.124507 ATTCCGTGGGTGTGGGTCTG 62.125 60.000 0.00 0.00 0.00 3.51
75 76 0.545787 TATTCCGTGGGTGTGGGTCT 60.546 55.000 0.00 0.00 0.00 3.85
76 77 0.107848 CTATTCCGTGGGTGTGGGTC 60.108 60.000 0.00 0.00 0.00 4.46
77 78 0.545787 TCTATTCCGTGGGTGTGGGT 60.546 55.000 0.00 0.00 0.00 4.51
78 79 0.616371 TTCTATTCCGTGGGTGTGGG 59.384 55.000 0.00 0.00 0.00 4.61
79 80 2.012051 GCTTCTATTCCGTGGGTGTGG 61.012 57.143 0.00 0.00 0.00 4.17
80 81 1.338674 TGCTTCTATTCCGTGGGTGTG 60.339 52.381 0.00 0.00 0.00 3.82
81 82 0.981183 TGCTTCTATTCCGTGGGTGT 59.019 50.000 0.00 0.00 0.00 4.16
82 83 1.656652 CTGCTTCTATTCCGTGGGTG 58.343 55.000 0.00 0.00 0.00 4.61
83 84 0.107654 GCTGCTTCTATTCCGTGGGT 60.108 55.000 0.00 0.00 0.00 4.51
84 85 1.154205 CGCTGCTTCTATTCCGTGGG 61.154 60.000 0.00 0.00 0.00 4.61
85 86 1.766143 GCGCTGCTTCTATTCCGTGG 61.766 60.000 0.00 0.00 0.00 4.94
86 87 1.083806 TGCGCTGCTTCTATTCCGTG 61.084 55.000 9.73 0.00 0.00 4.94
87 88 1.084370 GTGCGCTGCTTCTATTCCGT 61.084 55.000 9.73 0.00 0.00 4.69
88 89 0.807667 AGTGCGCTGCTTCTATTCCG 60.808 55.000 9.73 0.00 0.00 4.30
89 90 1.063174 CAAGTGCGCTGCTTCTATTCC 59.937 52.381 9.73 0.00 0.00 3.01
90 91 1.530646 GCAAGTGCGCTGCTTCTATTC 60.531 52.381 9.73 0.00 0.00 1.75
91 92 0.449388 GCAAGTGCGCTGCTTCTATT 59.551 50.000 9.73 0.00 0.00 1.73
92 93 1.947678 AAGCAAGTGCGCTGCTTCTAT 60.948 47.619 24.68 7.71 44.46 1.98
93 94 0.603707 AAGCAAGTGCGCTGCTTCTA 60.604 50.000 24.68 0.00 44.46 2.10
94 95 1.895707 AAGCAAGTGCGCTGCTTCT 60.896 52.632 24.68 15.98 44.46 2.85
95 96 2.641559 AAGCAAGTGCGCTGCTTC 59.358 55.556 24.68 14.46 44.46 3.86
103 104 2.960170 CAGCCAGGAAGCAAGTGC 59.040 61.111 0.00 0.00 42.49 4.40
104 105 0.321919 TAGCAGCCAGGAAGCAAGTG 60.322 55.000 6.36 0.00 34.23 3.16
105 106 0.035630 CTAGCAGCCAGGAAGCAAGT 60.036 55.000 6.36 0.00 34.23 3.16
106 107 0.747283 CCTAGCAGCCAGGAAGCAAG 60.747 60.000 0.00 0.00 34.91 4.01
107 108 1.300963 CCTAGCAGCCAGGAAGCAA 59.699 57.895 0.00 0.00 34.91 3.91
108 109 2.673200 CCCTAGCAGCCAGGAAGCA 61.673 63.158 8.73 0.00 34.91 3.91
109 110 2.191641 CCCTAGCAGCCAGGAAGC 59.808 66.667 8.73 0.00 34.91 3.86
110 111 1.694133 CCTCCCTAGCAGCCAGGAAG 61.694 65.000 8.73 0.00 34.91 3.46
111 112 1.690633 CCTCCCTAGCAGCCAGGAA 60.691 63.158 8.73 0.00 34.91 3.36
112 113 2.041508 CCTCCCTAGCAGCCAGGA 60.042 66.667 8.73 1.83 34.91 3.86
113 114 1.566298 AAACCTCCCTAGCAGCCAGG 61.566 60.000 0.00 0.00 0.00 4.45
114 115 0.393537 CAAACCTCCCTAGCAGCCAG 60.394 60.000 0.00 0.00 0.00 4.85
115 116 1.685224 CAAACCTCCCTAGCAGCCA 59.315 57.895 0.00 0.00 0.00 4.75
116 117 1.750780 GCAAACCTCCCTAGCAGCC 60.751 63.158 0.00 0.00 0.00 4.85
117 118 2.109126 CGCAAACCTCCCTAGCAGC 61.109 63.158 0.00 0.00 0.00 5.25
118 119 1.450312 CCGCAAACCTCCCTAGCAG 60.450 63.158 0.00 0.00 0.00 4.24
119 120 1.899437 CTCCGCAAACCTCCCTAGCA 61.899 60.000 0.00 0.00 0.00 3.49
120 121 1.153349 CTCCGCAAACCTCCCTAGC 60.153 63.158 0.00 0.00 0.00 3.42
121 122 1.522569 CCTCCGCAAACCTCCCTAG 59.477 63.158 0.00 0.00 0.00 3.02
122 123 2.666098 GCCTCCGCAAACCTCCCTA 61.666 63.158 0.00 0.00 34.03 3.53
123 124 4.035102 GCCTCCGCAAACCTCCCT 62.035 66.667 0.00 0.00 34.03 4.20
125 126 4.344865 TGGCCTCCGCAAACCTCC 62.345 66.667 3.32 0.00 36.38 4.30
126 127 3.056328 GTGGCCTCCGCAAACCTC 61.056 66.667 3.32 0.00 36.38 3.85
130 131 4.572571 AACCGTGGCCTCCGCAAA 62.573 61.111 3.32 0.00 36.38 3.68
134 135 4.760047 CCTCAACCGTGGCCTCCG 62.760 72.222 3.32 6.33 0.00 4.63
135 136 3.316573 CTCCTCAACCGTGGCCTCC 62.317 68.421 3.32 0.00 0.00 4.30
136 137 2.266055 CTCCTCAACCGTGGCCTC 59.734 66.667 3.32 0.00 0.00 4.70
137 138 4.021925 GCTCCTCAACCGTGGCCT 62.022 66.667 3.32 0.00 0.00 5.19
139 140 4.373116 TCGCTCCTCAACCGTGGC 62.373 66.667 0.00 0.00 0.00 5.01
140 141 2.125912 CTCGCTCCTCAACCGTGG 60.126 66.667 0.00 0.00 0.00 4.94
141 142 0.734253 CTTCTCGCTCCTCAACCGTG 60.734 60.000 0.00 0.00 0.00 4.94
142 143 1.587054 CTTCTCGCTCCTCAACCGT 59.413 57.895 0.00 0.00 0.00 4.83
143 144 1.807573 GCTTCTCGCTCCTCAACCG 60.808 63.158 0.00 0.00 35.14 4.44
144 145 1.807573 CGCTTCTCGCTCCTCAACC 60.808 63.158 0.00 0.00 36.13 3.77
145 146 0.179124 ATCGCTTCTCGCTCCTCAAC 60.179 55.000 0.00 0.00 38.27 3.18
146 147 0.179127 CATCGCTTCTCGCTCCTCAA 60.179 55.000 0.00 0.00 38.27 3.02
147 148 1.435105 CATCGCTTCTCGCTCCTCA 59.565 57.895 0.00 0.00 38.27 3.86
148 149 1.299773 CCATCGCTTCTCGCTCCTC 60.300 63.158 0.00 0.00 38.27 3.71
149 150 2.055042 ACCATCGCTTCTCGCTCCT 61.055 57.895 0.00 0.00 38.27 3.69
150 151 1.880340 CACCATCGCTTCTCGCTCC 60.880 63.158 0.00 0.00 38.27 4.70
151 152 2.520904 GCACCATCGCTTCTCGCTC 61.521 63.158 0.00 0.00 38.27 5.03
152 153 2.510238 GCACCATCGCTTCTCGCT 60.510 61.111 0.00 0.00 38.27 4.93
153 154 2.806856 CTGCACCATCGCTTCTCGC 61.807 63.158 0.00 0.00 38.27 5.03
154 155 2.169789 CCTGCACCATCGCTTCTCG 61.170 63.158 0.00 0.00 40.15 4.04
155 156 2.467826 GCCTGCACCATCGCTTCTC 61.468 63.158 0.00 0.00 0.00 2.87
156 157 2.437359 GCCTGCACCATCGCTTCT 60.437 61.111 0.00 0.00 0.00 2.85
157 158 3.512516 GGCCTGCACCATCGCTTC 61.513 66.667 0.00 0.00 0.00 3.86
158 159 4.349503 TGGCCTGCACCATCGCTT 62.350 61.111 3.32 0.00 33.75 4.68
161 162 2.923426 ATACGTGGCCTGCACCATCG 62.923 60.000 3.32 13.11 43.01 3.84
162 163 1.153168 ATACGTGGCCTGCACCATC 60.153 57.895 3.32 0.00 43.01 3.51
163 164 1.451927 CATACGTGGCCTGCACCAT 60.452 57.895 3.32 0.00 43.01 3.55
164 165 2.046411 CATACGTGGCCTGCACCA 60.046 61.111 3.32 0.00 37.38 4.17
165 166 2.824041 CCATACGTGGCCTGCACC 60.824 66.667 3.32 0.00 39.01 5.01
166 167 2.824041 CCCATACGTGGCCTGCAC 60.824 66.667 3.32 0.00 44.62 4.57
167 168 4.794648 GCCCATACGTGGCCTGCA 62.795 66.667 3.32 0.00 44.62 4.41
173 174 0.107410 TAGCCAAAGCCCATACGTGG 60.107 55.000 0.00 0.00 45.61 4.94
174 175 1.299541 CTAGCCAAAGCCCATACGTG 58.700 55.000 0.00 0.00 41.25 4.49
175 176 0.463833 GCTAGCCAAAGCCCATACGT 60.464 55.000 2.29 0.00 41.25 3.57
176 177 1.498865 CGCTAGCCAAAGCCCATACG 61.499 60.000 9.66 0.00 41.25 3.06
177 178 0.179056 TCGCTAGCCAAAGCCCATAC 60.179 55.000 9.66 0.00 41.25 2.39
178 179 0.106708 CTCGCTAGCCAAAGCCCATA 59.893 55.000 9.66 0.00 41.25 2.74
179 180 1.153086 CTCGCTAGCCAAAGCCCAT 60.153 57.895 9.66 0.00 41.25 4.00
180 181 1.836999 TTCTCGCTAGCCAAAGCCCA 61.837 55.000 9.66 0.00 41.25 5.36
181 182 0.676782 TTTCTCGCTAGCCAAAGCCC 60.677 55.000 9.66 0.00 41.25 5.19
182 183 1.064654 CATTTCTCGCTAGCCAAAGCC 59.935 52.381 9.66 0.00 41.25 4.35
183 184 2.009774 TCATTTCTCGCTAGCCAAAGC 58.990 47.619 9.66 0.00 39.21 3.51
184 185 3.486542 GCTTCATTTCTCGCTAGCCAAAG 60.487 47.826 9.66 4.61 0.00 2.77
185 186 2.420022 GCTTCATTTCTCGCTAGCCAAA 59.580 45.455 9.66 6.38 0.00 3.28
186 187 2.009774 GCTTCATTTCTCGCTAGCCAA 58.990 47.619 9.66 0.00 0.00 4.52
187 188 1.656652 GCTTCATTTCTCGCTAGCCA 58.343 50.000 9.66 0.00 0.00 4.75
188 189 0.579156 CGCTTCATTTCTCGCTAGCC 59.421 55.000 9.66 0.00 0.00 3.93
189 190 1.560923 TCGCTTCATTTCTCGCTAGC 58.439 50.000 4.06 4.06 0.00 3.42
190 191 2.537625 CCTTCGCTTCATTTCTCGCTAG 59.462 50.000 0.00 0.00 0.00 3.42
191 192 2.165641 TCCTTCGCTTCATTTCTCGCTA 59.834 45.455 0.00 0.00 0.00 4.26
192 193 1.066858 TCCTTCGCTTCATTTCTCGCT 60.067 47.619 0.00 0.00 0.00 4.93
216 217 1.759445 TGTGCCTCAGCTATCTTCCTC 59.241 52.381 0.00 0.00 40.80 3.71
241 242 2.079158 CGACACAACTGAATCAGCCAT 58.921 47.619 10.62 0.00 34.37 4.40
243 244 1.512926 ACGACACAACTGAATCAGCC 58.487 50.000 10.62 0.00 34.37 4.85
261 262 1.152963 AGCCCATTCCGCCATGTAC 60.153 57.895 0.00 0.00 0.00 2.90
295 296 1.620822 GTGTTTGTCATGGGAGCCTT 58.379 50.000 0.00 0.00 0.00 4.35
305 306 1.340248 GAGTCTCCCTCGTGTTTGTCA 59.660 52.381 0.00 0.00 0.00 3.58
328 329 3.229293 CTGACTCCAGAGCTATCCATCA 58.771 50.000 0.00 0.00 43.02 3.07
341 342 1.059584 TTTGACCCAGCCTGACTCCA 61.060 55.000 0.00 0.00 0.00 3.86
383 384 1.446618 CTTTTGCCGCCATGCCTTC 60.447 57.895 0.00 0.00 0.00 3.46
405 406 4.778415 CTCAGGACGACACCGCCG 62.778 72.222 0.00 0.00 39.95 6.46
415 416 1.222936 CATGGTGGCCTCTCAGGAC 59.777 63.158 3.32 0.00 46.38 3.85
427 428 0.393537 GCTCTGAAGTCCCCATGGTG 60.394 60.000 11.73 0.00 0.00 4.17
516 518 3.921104 TGATCTCTCCTGCTAGTTGGAT 58.079 45.455 6.36 0.00 0.00 3.41
542 544 2.355132 CGTCTCGAGGTGTAGCTTATGT 59.645 50.000 13.56 0.00 0.00 2.29
557 559 0.921347 CCGTTTTGCTATCCGTCTCG 59.079 55.000 0.00 0.00 0.00 4.04
617 619 1.663702 CTCAACACACGGTCCCGAC 60.664 63.158 13.54 0.00 42.83 4.79
651 653 3.782244 CTCGCTGAAGCCACGCAC 61.782 66.667 0.00 0.00 37.91 5.34
703 705 4.991056 CCTTAGCTAATTTATGAGCAGCGA 59.009 41.667 6.64 0.00 41.36 4.93
725 727 2.022934 CGTTCCTCTCCTACACCTACC 58.977 57.143 0.00 0.00 0.00 3.18
731 733 2.502142 TACAGCGTTCCTCTCCTACA 57.498 50.000 0.00 0.00 0.00 2.74
732 734 2.479901 GCTTACAGCGTTCCTCTCCTAC 60.480 54.545 0.00 0.00 0.00 3.18
761 763 6.765036 CGAGTACAAAGTCTAGAGGTACCATA 59.235 42.308 15.94 5.67 35.98 2.74
772 774 6.598064 TGAGATCACATCGAGTACAAAGTCTA 59.402 38.462 0.00 0.00 0.00 2.59
814 816 6.694447 TCCGCCGCTTTATTTATCTAGTAAT 58.306 36.000 0.00 0.00 0.00 1.89
818 820 4.989168 ACTTCCGCCGCTTTATTTATCTAG 59.011 41.667 0.00 0.00 0.00 2.43
1233 1243 4.559862 TCCTCTGAGATTCAAAGGTTCC 57.440 45.455 6.17 0.00 0.00 3.62
1234 1244 4.394610 GCTTCCTCTGAGATTCAAAGGTTC 59.605 45.833 6.17 0.00 0.00 3.62
1253 1263 2.841442 AGGCTATTACATCCGGCTTC 57.159 50.000 0.00 0.00 0.00 3.86
1272 1282 2.660553 CTTGCGCTGCGGACAACAAA 62.661 55.000 24.61 3.50 0.00 2.83
1458 1470 5.032170 ACCTAAAGCCATCCAATTCCAAAT 58.968 37.500 0.00 0.00 0.00 2.32
1616 1628 5.929992 TCCCAATACTAAACAAAGACACGAG 59.070 40.000 0.00 0.00 0.00 4.18
1625 1637 6.691255 ACCACTACTCCCAATACTAAACAA 57.309 37.500 0.00 0.00 0.00 2.83
1639 1651 7.023575 CAGTCAAAATGCATTAACCACTACTC 58.976 38.462 13.39 0.00 0.00 2.59
1640 1652 6.071952 CCAGTCAAAATGCATTAACCACTACT 60.072 38.462 13.39 6.96 0.00 2.57
1641 1653 6.092748 CCAGTCAAAATGCATTAACCACTAC 58.907 40.000 13.39 4.84 0.00 2.73
1774 1874 4.574674 TGATGACCAAATCTTACAGCCT 57.425 40.909 0.00 0.00 0.00 4.58
1861 1961 4.350245 TCAAGTAGGCTACTGTGTGGTAT 58.650 43.478 26.87 6.68 39.39 2.73
1926 2029 8.143835 AGACCAGTCATGAACAAAATAAAAAGG 58.856 33.333 0.00 0.00 0.00 3.11
1927 2030 9.533253 AAGACCAGTCATGAACAAAATAAAAAG 57.467 29.630 0.00 0.00 0.00 2.27
1972 2075 3.131223 CACTAACTCCTGACGACATCCAT 59.869 47.826 0.00 0.00 0.00 3.41
1979 2082 3.081710 TCCATCACTAACTCCTGACGA 57.918 47.619 0.00 0.00 0.00 4.20
1983 2086 8.915057 AATATTTGATCCATCACTAACTCCTG 57.085 34.615 0.00 0.00 36.36 3.86
2182 2287 4.037684 CCCATTACGTACTCTAACAGGGAG 59.962 50.000 0.00 0.00 34.49 4.30
2183 2288 3.956199 CCCATTACGTACTCTAACAGGGA 59.044 47.826 0.00 0.00 34.49 4.20
2184 2289 3.492137 GCCCATTACGTACTCTAACAGGG 60.492 52.174 0.00 0.00 35.68 4.45
2398 2523 1.903877 GCTGCTAGAAGGAGGGCACA 61.904 60.000 0.00 0.00 33.92 4.57
2983 3371 2.721167 CGGCGGGGACTTGATCTGA 61.721 63.158 0.00 0.00 0.00 3.27
3183 3577 2.759560 GGGAAACCGCATGCCCAT 60.760 61.111 13.15 0.00 43.64 4.00
3839 4570 2.122768 GATGACTGAGGGAGATTGGGT 58.877 52.381 0.00 0.00 0.00 4.51
3970 4877 3.827008 ACACTGCAGAGAAGAAACTCA 57.173 42.857 23.35 0.00 39.14 3.41
3971 4878 4.465040 CAACACTGCAGAGAAGAAACTC 57.535 45.455 23.35 0.00 37.19 3.01
4036 4950 3.252215 TGCTACGGAACCACAAAAATGAG 59.748 43.478 0.00 0.00 0.00 2.90
4152 5066 4.993705 TGGTTTAGGGGATAGCCTTATG 57.006 45.455 0.00 0.00 0.00 1.90
4166 5080 3.364964 CGCTACAAGGCTGTTTGGTTTAG 60.365 47.826 0.00 0.00 36.96 1.85
4296 5211 3.305629 GCGTCAACTTCTTCTATGCTGAG 59.694 47.826 0.00 0.00 0.00 3.35
4363 5278 4.150897 AGAAAGCAGTCAACTGTAACCA 57.849 40.909 11.55 0.00 45.45 3.67
4634 5700 0.945813 TTTAAAACCCACTGCGTCCG 59.054 50.000 0.00 0.00 0.00 4.79
4637 5704 4.123506 CCAAATTTTAAAACCCACTGCGT 58.876 39.130 1.97 0.00 0.00 5.24
4735 5802 5.221126 GCACAAACAAAGAATCTCCACTTCT 60.221 40.000 0.00 0.00 34.46 2.85
4819 5886 0.331278 TGGGATGGGATGTGACAACC 59.669 55.000 2.91 2.91 0.00 3.77
5078 6151 1.708993 TAGATGTGGGGGCTCATGGC 61.709 60.000 0.00 0.00 40.90 4.40
5089 6162 5.530171 AGCATGTAAAATCAGCTAGATGTGG 59.470 40.000 8.04 0.00 36.96 4.17
5169 6242 6.594788 AAAAGCAGGCATGATAGAGAAAAA 57.405 33.333 0.62 0.00 0.00 1.94
5221 6294 8.665643 AAATGTGAATGAGCAAAGAAAATCAA 57.334 26.923 0.00 0.00 0.00 2.57
5242 6315 5.407387 CAGAACAAAGGCAGGAAATGAAATG 59.593 40.000 0.00 0.00 0.00 2.32
5400 6473 4.858850 TCCTATGAATGAACAGCCACATT 58.141 39.130 0.00 0.00 39.06 2.71
5419 6523 3.092301 GCCTTGGTTTGAAATAGCTCCT 58.908 45.455 0.00 0.00 0.00 3.69
5425 6529 5.010617 GGAAGACAAGCCTTGGTTTGAAATA 59.989 40.000 20.26 0.00 34.12 1.40
5475 6579 4.085357 TGAGGCACTGTGTAACTGAATT 57.915 40.909 9.86 0.00 41.55 2.17
5579 6683 8.593945 AAAATTAAGATCTAAGCCATGGACAA 57.406 30.769 18.40 0.00 0.00 3.18
5603 6707 7.130681 ACAAATAAACAGGATGGGTGAAAAA 57.869 32.000 0.00 0.00 43.62 1.94
5609 6713 5.982890 CTGAACAAATAAACAGGATGGGT 57.017 39.130 0.00 0.00 43.62 4.51
5628 6732 1.591703 CGCTAGAACCAGCACCTGA 59.408 57.895 0.00 0.00 41.88 3.86
5645 6749 6.280643 TCACTATAATCAAGTTGATCACCCG 58.719 40.000 18.52 9.09 35.76 5.28
5825 6929 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
5837 6941 5.350504 AACAGAGAGAGAGAGAGAGAGAG 57.649 47.826 0.00 0.00 0.00 3.20
5839 6943 7.275183 TGAATAACAGAGAGAGAGAGAGAGAG 58.725 42.308 0.00 0.00 0.00 3.20
5840 6944 7.194112 TGAATAACAGAGAGAGAGAGAGAGA 57.806 40.000 0.00 0.00 0.00 3.10
5841 6945 8.455903 AATGAATAACAGAGAGAGAGAGAGAG 57.544 38.462 0.00 0.00 0.00 3.20
5843 6947 8.131100 GTGAATGAATAACAGAGAGAGAGAGAG 58.869 40.741 0.00 0.00 0.00 3.20
5844 6948 7.833682 AGTGAATGAATAACAGAGAGAGAGAGA 59.166 37.037 0.00 0.00 0.00 3.10
5845 6949 7.999679 AGTGAATGAATAACAGAGAGAGAGAG 58.000 38.462 0.00 0.00 0.00 3.20
5846 6950 7.613411 TGAGTGAATGAATAACAGAGAGAGAGA 59.387 37.037 0.00 0.00 0.00 3.10
5847 6951 7.770201 TGAGTGAATGAATAACAGAGAGAGAG 58.230 38.462 0.00 0.00 0.00 3.20
5848 6952 7.709149 TGAGTGAATGAATAACAGAGAGAGA 57.291 36.000 0.00 0.00 0.00 3.10
5849 6953 9.462174 GTATGAGTGAATGAATAACAGAGAGAG 57.538 37.037 0.00 0.00 0.00 3.20
5850 6954 9.194972 AGTATGAGTGAATGAATAACAGAGAGA 57.805 33.333 0.00 0.00 0.00 3.10
5851 6955 9.462174 GAGTATGAGTGAATGAATAACAGAGAG 57.538 37.037 0.00 0.00 0.00 3.20
5852 6956 9.194972 AGAGTATGAGTGAATGAATAACAGAGA 57.805 33.333 0.00 0.00 0.00 3.10
5853 6957 9.814899 AAGAGTATGAGTGAATGAATAACAGAG 57.185 33.333 0.00 0.00 0.00 3.35
5854 6958 9.591792 CAAGAGTATGAGTGAATGAATAACAGA 57.408 33.333 0.00 0.00 0.00 3.41
5855 6959 9.376075 ACAAGAGTATGAGTGAATGAATAACAG 57.624 33.333 0.00 0.00 0.00 3.16
5856 6960 9.154847 CACAAGAGTATGAGTGAATGAATAACA 57.845 33.333 0.00 0.00 33.99 2.41
5962 7066 1.593787 CAGAGAGGCGTCATGTGGT 59.406 57.895 9.41 0.00 0.00 4.16
6121 7225 9.751542 GTACATAGTAGCATGACAAAGAGTAAT 57.248 33.333 0.00 0.00 0.00 1.89
6195 7300 3.643763 GAGTCGACCAATACAGGCATAG 58.356 50.000 13.01 0.00 0.00 2.23
6230 7335 5.731591 AGGTTTCTTCACCTAAATACGGAG 58.268 41.667 0.00 0.00 46.14 4.63
6241 7346 3.823304 AGCAAGAATGAGGTTTCTTCACC 59.177 43.478 0.00 0.00 42.58 4.02
6242 7347 4.759183 AGAGCAAGAATGAGGTTTCTTCAC 59.241 41.667 0.00 0.00 42.58 3.18
6244 7349 5.956068 AAGAGCAAGAATGAGGTTTCTTC 57.044 39.130 0.00 0.00 42.58 2.87
6245 7350 5.010415 CCAAAGAGCAAGAATGAGGTTTCTT 59.990 40.000 0.00 0.00 44.71 2.52
6246 7351 4.522022 CCAAAGAGCAAGAATGAGGTTTCT 59.478 41.667 0.00 0.00 37.56 2.52
6247 7352 4.520492 TCCAAAGAGCAAGAATGAGGTTTC 59.480 41.667 0.00 0.00 0.00 2.78
6248 7353 4.473444 TCCAAAGAGCAAGAATGAGGTTT 58.527 39.130 0.00 0.00 0.00 3.27
6249 7354 4.104383 TCCAAAGAGCAAGAATGAGGTT 57.896 40.909 0.00 0.00 0.00 3.50
6250 7355 3.795688 TCCAAAGAGCAAGAATGAGGT 57.204 42.857 0.00 0.00 0.00 3.85
6251 7356 4.948621 AGAATCCAAAGAGCAAGAATGAGG 59.051 41.667 0.00 0.00 0.00 3.86
6252 7357 5.676584 GCAGAATCCAAAGAGCAAGAATGAG 60.677 44.000 0.00 0.00 0.00 2.90
6253 7358 4.157289 GCAGAATCCAAAGAGCAAGAATGA 59.843 41.667 0.00 0.00 0.00 2.57
6254 7359 4.158025 AGCAGAATCCAAAGAGCAAGAATG 59.842 41.667 0.00 0.00 0.00 2.67
6255 7360 4.158025 CAGCAGAATCCAAAGAGCAAGAAT 59.842 41.667 0.00 0.00 0.00 2.40
6256 7361 3.504906 CAGCAGAATCCAAAGAGCAAGAA 59.495 43.478 0.00 0.00 0.00 2.52
6257 7362 3.079578 CAGCAGAATCCAAAGAGCAAGA 58.920 45.455 0.00 0.00 0.00 3.02
6291 7396 5.734720 TCATCCTGGAGTACTTGTCATTTC 58.265 41.667 1.52 0.00 0.00 2.17
6293 7398 5.426509 TCATCATCCTGGAGTACTTGTCATT 59.573 40.000 1.52 0.00 0.00 2.57
6296 7401 5.543507 ATCATCATCCTGGAGTACTTGTC 57.456 43.478 1.52 0.00 0.00 3.18
6316 7421 6.603201 TGTTAAGACATTCCCCAGATTCAATC 59.397 38.462 0.00 0.00 0.00 2.67
6326 7431 2.081462 CCGTGTGTTAAGACATTCCCC 58.919 52.381 8.87 0.00 38.23 4.81
6332 7437 0.931702 CGCAACCGTGTGTTAAGACA 59.068 50.000 0.45 0.45 34.69 3.41
6371 7476 2.351706 TTCGTTTTGCTGGTAAGGGT 57.648 45.000 0.00 0.00 0.00 4.34
6372 7477 3.719173 TTTTCGTTTTGCTGGTAAGGG 57.281 42.857 0.00 0.00 0.00 3.95
6416 7522 3.063510 AGAATTGCTCTTGCTGTGCTA 57.936 42.857 0.00 0.28 40.48 3.49
6429 7535 8.548721 ACGTGCATATTTACTAGTAAGAATTGC 58.451 33.333 22.15 22.15 0.00 3.56
6507 7967 3.006247 TCATCAAATCGACAAATGCCGA 58.994 40.909 0.00 0.00 39.25 5.54
6583 8048 0.760945 AGCCATCCTAGAAGGGGTCG 60.761 60.000 0.00 0.00 35.59 4.79
6588 8053 1.500474 TGGACAGCCATCCTAGAAGG 58.500 55.000 5.50 0.00 39.92 3.46
6632 8600 5.716703 AGGCAGATTATATTGGGGTTTATGC 59.283 40.000 0.00 0.00 0.00 3.14
6800 8771 2.031120 ACGTTAATGGGATTGGGCATG 58.969 47.619 0.00 0.00 0.00 4.06
6816 8787 1.597027 CACGCAGGAAGGGAACGTT 60.597 57.895 0.00 0.00 40.02 3.99
6832 8803 1.337118 CTAGGGATGGAGGAGAGCAC 58.663 60.000 0.00 0.00 0.00 4.40
6910 8891 0.954452 GATGGATTCCGAACATGGCC 59.046 55.000 0.00 0.00 0.00 5.36
6911 8892 1.334869 GTGATGGATTCCGAACATGGC 59.665 52.381 0.00 0.00 0.00 4.40
6912 8893 2.642427 TGTGATGGATTCCGAACATGG 58.358 47.619 0.00 0.00 0.00 3.66
6913 8894 3.251729 GGATGTGATGGATTCCGAACATG 59.748 47.826 17.56 0.00 0.00 3.21
6914 8895 3.117926 TGGATGTGATGGATTCCGAACAT 60.118 43.478 14.25 14.25 0.00 2.71
6915 8896 2.238395 TGGATGTGATGGATTCCGAACA 59.762 45.455 7.21 7.21 0.00 3.18
6916 8897 2.614057 GTGGATGTGATGGATTCCGAAC 59.386 50.000 0.00 0.00 0.00 3.95
6917 8898 2.505407 AGTGGATGTGATGGATTCCGAA 59.495 45.455 0.00 0.00 0.00 4.30
6918 8899 2.103094 GAGTGGATGTGATGGATTCCGA 59.897 50.000 0.00 0.00 0.00 4.55
6919 8900 2.487934 GAGTGGATGTGATGGATTCCG 58.512 52.381 0.00 0.00 0.00 4.30
6920 8901 2.808202 CGGAGTGGATGTGATGGATTCC 60.808 54.545 0.00 0.00 0.00 3.01
6921 8902 2.103094 TCGGAGTGGATGTGATGGATTC 59.897 50.000 0.00 0.00 0.00 2.52
6922 8903 2.118679 TCGGAGTGGATGTGATGGATT 58.881 47.619 0.00 0.00 0.00 3.01
6923 8904 1.414181 GTCGGAGTGGATGTGATGGAT 59.586 52.381 0.00 0.00 0.00 3.41
6924 8905 0.824109 GTCGGAGTGGATGTGATGGA 59.176 55.000 0.00 0.00 0.00 3.41
6925 8906 0.826715 AGTCGGAGTGGATGTGATGG 59.173 55.000 0.00 0.00 0.00 3.51
6926 8907 1.202463 GGAGTCGGAGTGGATGTGATG 60.202 57.143 0.00 0.00 0.00 3.07
6927 8908 1.115467 GGAGTCGGAGTGGATGTGAT 58.885 55.000 0.00 0.00 0.00 3.06
6928 8909 1.313091 CGGAGTCGGAGTGGATGTGA 61.313 60.000 0.00 0.00 0.00 3.58
6929 8910 1.139734 CGGAGTCGGAGTGGATGTG 59.860 63.158 0.00 0.00 0.00 3.21
6930 8911 2.711922 GCGGAGTCGGAGTGGATGT 61.712 63.158 1.18 0.00 36.79 3.06
6931 8912 2.105128 GCGGAGTCGGAGTGGATG 59.895 66.667 1.18 0.00 36.79 3.51
6932 8913 3.518998 CGCGGAGTCGGAGTGGAT 61.519 66.667 0.00 0.00 36.79 3.41
6937 8918 4.421479 AACTGCGCGGAGTCGGAG 62.421 66.667 33.50 7.30 46.21 4.63
6938 8919 4.717629 CAACTGCGCGGAGTCGGA 62.718 66.667 33.50 0.00 36.79 4.55
6940 8921 3.767230 CACAACTGCGCGGAGTCG 61.767 66.667 33.50 25.79 39.81 4.18
6941 8922 3.414700 CCACAACTGCGCGGAGTC 61.415 66.667 33.50 3.75 0.00 3.36
6942 8923 3.865929 CTCCACAACTGCGCGGAGT 62.866 63.158 28.56 28.56 40.21 3.85
6943 8924 3.114616 CTCCACAACTGCGCGGAG 61.115 66.667 26.95 26.95 39.20 4.63
6946 8927 3.782244 GAGCTCCACAACTGCGCG 61.782 66.667 0.00 0.00 0.00 6.86
6947 8928 2.666190 TGAGCTCCACAACTGCGC 60.666 61.111 12.15 0.00 0.00 6.09
6948 8929 0.882042 AACTGAGCTCCACAACTGCG 60.882 55.000 12.15 0.00 0.00 5.18
6949 8930 1.312815 AAACTGAGCTCCACAACTGC 58.687 50.000 12.15 0.00 0.00 4.40
6950 8931 3.070018 CCTAAACTGAGCTCCACAACTG 58.930 50.000 12.15 0.00 0.00 3.16
6951 8932 2.551071 GCCTAAACTGAGCTCCACAACT 60.551 50.000 12.15 0.00 0.00 3.16
6952 8933 1.807142 GCCTAAACTGAGCTCCACAAC 59.193 52.381 12.15 0.00 0.00 3.32
6953 8934 1.271379 GGCCTAAACTGAGCTCCACAA 60.271 52.381 12.15 0.00 0.00 3.33
6954 8935 0.324943 GGCCTAAACTGAGCTCCACA 59.675 55.000 12.15 0.00 0.00 4.17
6955 8936 0.741221 CGGCCTAAACTGAGCTCCAC 60.741 60.000 12.15 0.00 0.00 4.02
6956 8937 1.596934 CGGCCTAAACTGAGCTCCA 59.403 57.895 12.15 0.00 0.00 3.86
6957 8938 1.815840 GCGGCCTAAACTGAGCTCC 60.816 63.158 12.15 0.00 0.00 4.70
6958 8939 0.808060 GAGCGGCCTAAACTGAGCTC 60.808 60.000 6.82 6.82 43.11 4.09
6959 8940 1.219393 GAGCGGCCTAAACTGAGCT 59.781 57.895 0.00 0.00 37.69 4.09
6960 8941 1.815840 GGAGCGGCCTAAACTGAGC 60.816 63.158 0.00 0.00 0.00 4.26
6961 8942 1.519455 CGGAGCGGCCTAAACTGAG 60.519 63.158 0.00 0.00 0.00 3.35
6962 8943 0.966875 TACGGAGCGGCCTAAACTGA 60.967 55.000 0.00 0.00 0.00 3.41
6963 8944 0.108520 TTACGGAGCGGCCTAAACTG 60.109 55.000 0.00 0.00 0.00 3.16
6964 8945 0.609662 TTTACGGAGCGGCCTAAACT 59.390 50.000 0.00 0.00 0.00 2.66
6965 8946 1.441738 TTTTACGGAGCGGCCTAAAC 58.558 50.000 0.00 0.00 0.00 2.01
6966 8947 2.181954 TTTTTACGGAGCGGCCTAAA 57.818 45.000 0.00 0.00 0.00 1.85
6967 8948 2.011222 CATTTTTACGGAGCGGCCTAA 58.989 47.619 0.00 0.00 0.00 2.69
6968 8949 1.207570 TCATTTTTACGGAGCGGCCTA 59.792 47.619 0.00 0.00 0.00 3.93
6969 8950 0.035820 TCATTTTTACGGAGCGGCCT 60.036 50.000 0.00 0.00 0.00 5.19
6970 8951 0.377203 CTCATTTTTACGGAGCGGCC 59.623 55.000 0.00 0.00 0.00 6.13
6971 8952 0.248094 GCTCATTTTTACGGAGCGGC 60.248 55.000 0.00 0.00 43.83 6.53
6972 8953 3.897819 GCTCATTTTTACGGAGCGG 57.102 52.632 0.00 0.00 43.83 5.52
6975 8956 3.804873 GCCTCTAGCTCATTTTTACGGAG 59.195 47.826 0.00 0.00 38.99 4.63
6976 8957 3.793559 GCCTCTAGCTCATTTTTACGGA 58.206 45.455 0.00 0.00 38.99 4.69
6989 8970 3.189010 GAGCGGACGAGCCTCTAGC 62.189 68.421 0.00 0.00 44.25 3.42
6990 8971 2.548295 GGAGCGGACGAGCCTCTAG 61.548 68.421 0.00 0.00 38.01 2.43
6991 8972 2.516460 GGAGCGGACGAGCCTCTA 60.516 66.667 0.00 0.00 38.01 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.