Multiple sequence alignment - TraesCS4B01G215200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G215200 chr4B 100.000 4266 0 0 1 4266 454708351 454704086 0.000000e+00 7878
1 TraesCS4B01G215200 chr4D 96.149 2986 67 14 711 3678 369334468 369331513 0.000000e+00 4833
2 TraesCS4B01G215200 chr4D 94.792 288 14 1 3980 4266 369331468 369331181 8.410000e-122 448
3 TraesCS4B01G215200 chr4D 89.895 287 26 2 3678 3961 349253911 349253625 2.420000e-97 366
4 TraesCS4B01G215200 chr4A 96.136 1501 49 5 711 2208 95174760 95176254 0.000000e+00 2442
5 TraesCS4B01G215200 chr4A 91.506 1448 54 22 2234 3655 95176341 95177745 0.000000e+00 1929
6 TraesCS4B01G215200 chr4A 97.599 583 13 1 1 582 669296617 669296035 0.000000e+00 998
7 TraesCS4B01G215200 chr4A 92.014 288 12 5 3678 3958 679504937 679505220 1.110000e-105 394
8 TraesCS4B01G215200 chr4A 90.444 293 25 2 3674 3963 347846984 347847276 2.410000e-102 383
9 TraesCS4B01G215200 chr7A 97.938 582 11 1 1 581 215139535 215138954 0.000000e+00 1007
10 TraesCS4B01G215200 chr7A 89.931 288 25 3 3678 3961 214069336 214069049 6.740000e-98 368
11 TraesCS4B01G215200 chr2B 97.607 585 12 2 1 583 40061840 40062424 0.000000e+00 1002
12 TraesCS4B01G215200 chr2B 97.427 583 14 1 1 582 457572927 457573509 0.000000e+00 992
13 TraesCS4B01G215200 chr2B 97.270 586 13 3 1 583 435418956 435419541 0.000000e+00 990
14 TraesCS4B01G215200 chr2B 90.625 288 23 3 3678 3962 153583880 153584166 3.110000e-101 379
15 TraesCS4B01G215200 chr6B 97.603 584 12 2 1 582 710137695 710138278 0.000000e+00 1000
16 TraesCS4B01G215200 chr6B 97.762 581 11 2 1 580 710782916 710782337 0.000000e+00 1000
17 TraesCS4B01G215200 chr5B 97.432 584 14 1 1 583 271243577 271242994 0.000000e+00 994
18 TraesCS4B01G215200 chr3B 97.590 581 13 1 1 580 417615293 417614713 0.000000e+00 994
19 TraesCS4B01G215200 chr3B 89.583 288 26 3 3675 3958 222823416 222823703 3.140000e-96 363
20 TraesCS4B01G215200 chr5A 91.319 288 21 3 3678 3962 419599769 419600055 1.440000e-104 390
21 TraesCS4B01G215200 chr2A 90.845 284 23 2 3678 3958 448774184 448774467 1.120000e-100 377
22 TraesCS4B01G215200 chr2A 90.592 287 17 6 3679 3958 364857420 364857703 5.210000e-99 372


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G215200 chr4B 454704086 454708351 4265 True 7878.0 7878 100.0000 1 4266 1 chr4B.!!$R1 4265
1 TraesCS4B01G215200 chr4D 369331181 369334468 3287 True 2640.5 4833 95.4705 711 4266 2 chr4D.!!$R2 3555
2 TraesCS4B01G215200 chr4A 95174760 95177745 2985 False 2185.5 2442 93.8210 711 3655 2 chr4A.!!$F3 2944
3 TraesCS4B01G215200 chr4A 669296035 669296617 582 True 998.0 998 97.5990 1 582 1 chr4A.!!$R1 581
4 TraesCS4B01G215200 chr7A 215138954 215139535 581 True 1007.0 1007 97.9380 1 581 1 chr7A.!!$R2 580
5 TraesCS4B01G215200 chr2B 40061840 40062424 584 False 1002.0 1002 97.6070 1 583 1 chr2B.!!$F1 582
6 TraesCS4B01G215200 chr2B 457572927 457573509 582 False 992.0 992 97.4270 1 582 1 chr2B.!!$F4 581
7 TraesCS4B01G215200 chr2B 435418956 435419541 585 False 990.0 990 97.2700 1 583 1 chr2B.!!$F3 582
8 TraesCS4B01G215200 chr6B 710137695 710138278 583 False 1000.0 1000 97.6030 1 582 1 chr6B.!!$F1 581
9 TraesCS4B01G215200 chr6B 710782337 710782916 579 True 1000.0 1000 97.7620 1 580 1 chr6B.!!$R1 579
10 TraesCS4B01G215200 chr5B 271242994 271243577 583 True 994.0 994 97.4320 1 583 1 chr5B.!!$R1 582
11 TraesCS4B01G215200 chr3B 417614713 417615293 580 True 994.0 994 97.5900 1 580 1 chr3B.!!$R1 579

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
638 641 0.032217 CCCTTGCTCCTCTCCTCTCT 60.032 60.000 0.00 0.0 0.00 3.10 F
708 711 0.035152 TTACCGCCTCTAGGTCGTGA 60.035 55.000 10.48 0.0 42.81 4.35 F
709 712 0.745845 TACCGCCTCTAGGTCGTGAC 60.746 60.000 10.48 0.0 42.81 3.67 F
733 736 1.073923 AGGAACCTACAAAGCCACTGG 59.926 52.381 0.00 0.0 0.00 4.00 F
993 997 1.285950 CGATCCGGATAGCGCAAGA 59.714 57.895 19.15 0.0 43.02 3.02 F
1148 1152 1.597663 CCTGCCCGATTCGTCAAATAC 59.402 52.381 5.20 0.0 0.00 1.89 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2390 2459 1.238439 TGAAACTGCTAGCACCAAGC 58.762 50.000 14.93 3.16 46.19 4.01 R
2393 2462 3.221771 ACAAATGAAACTGCTAGCACCA 58.778 40.909 14.93 9.85 0.00 4.17 R
2394 2463 3.253188 TGACAAATGAAACTGCTAGCACC 59.747 43.478 14.93 4.08 0.00 5.01 R
2395 2464 4.023707 ACTGACAAATGAAACTGCTAGCAC 60.024 41.667 14.93 4.53 0.00 4.40 R
2757 2846 2.356382 CGTTTGCCTTTCACAACACCTA 59.644 45.455 0.00 0.00 0.00 3.08 R
3344 3434 1.134995 CATGCTAGACTCTTCACGGCA 60.135 52.381 0.00 0.00 0.00 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.683933 AAGCGTCGGGGTCTCCAT 60.684 61.111 0.00 0.00 34.36 3.41
57 59 2.332654 GCCCCGAGCAATTTGACGT 61.333 57.895 0.00 0.00 42.97 4.34
154 156 3.691342 CGGTGACCGCCCTCAAGA 61.691 66.667 12.53 0.00 41.17 3.02
260 262 1.672356 CCTCCACACCGCTCCAAAG 60.672 63.158 0.00 0.00 0.00 2.77
548 551 9.607285 CGTAATTATTTTAAAGCGCCTATTCAT 57.393 29.630 2.29 0.00 0.00 2.57
583 586 4.363138 CGACATCCTCGATCTTTCAATGA 58.637 43.478 0.00 0.00 46.14 2.57
584 587 4.443725 CGACATCCTCGATCTTTCAATGAG 59.556 45.833 0.00 0.00 46.14 2.90
585 588 4.125703 ACATCCTCGATCTTTCAATGAGC 58.874 43.478 0.00 0.00 0.00 4.26
586 589 3.185246 TCCTCGATCTTTCAATGAGCC 57.815 47.619 0.00 0.00 0.00 4.70
587 590 2.501316 TCCTCGATCTTTCAATGAGCCA 59.499 45.455 0.00 0.00 0.00 4.75
588 591 2.611292 CCTCGATCTTTCAATGAGCCAC 59.389 50.000 0.00 0.00 0.00 5.01
589 592 3.264947 CTCGATCTTTCAATGAGCCACA 58.735 45.455 0.00 0.00 0.00 4.17
590 593 3.875727 CTCGATCTTTCAATGAGCCACAT 59.124 43.478 0.00 0.00 41.45 3.21
591 594 3.624410 TCGATCTTTCAATGAGCCACATG 59.376 43.478 0.00 0.00 39.39 3.21
592 595 3.703420 GATCTTTCAATGAGCCACATGC 58.297 45.455 0.00 0.00 39.39 4.06
601 604 4.232310 GCCACATGCTCCTCTTCC 57.768 61.111 0.00 0.00 36.87 3.46
602 605 1.606531 GCCACATGCTCCTCTTCCT 59.393 57.895 0.00 0.00 36.87 3.36
603 606 0.463474 GCCACATGCTCCTCTTCCTC 60.463 60.000 0.00 0.00 36.87 3.71
604 607 0.179936 CCACATGCTCCTCTTCCTCC 59.820 60.000 0.00 0.00 0.00 4.30
605 608 1.202330 CACATGCTCCTCTTCCTCCT 58.798 55.000 0.00 0.00 0.00 3.69
606 609 1.138661 CACATGCTCCTCTTCCTCCTC 59.861 57.143 0.00 0.00 0.00 3.71
607 610 1.008206 ACATGCTCCTCTTCCTCCTCT 59.992 52.381 0.00 0.00 0.00 3.69
608 611 1.688197 CATGCTCCTCTTCCTCCTCTC 59.312 57.143 0.00 0.00 0.00 3.20
609 612 0.395036 TGCTCCTCTTCCTCCTCTCG 60.395 60.000 0.00 0.00 0.00 4.04
610 613 1.734388 GCTCCTCTTCCTCCTCTCGC 61.734 65.000 0.00 0.00 0.00 5.03
611 614 0.106719 CTCCTCTTCCTCCTCTCGCT 60.107 60.000 0.00 0.00 0.00 4.93
612 615 0.395036 TCCTCTTCCTCCTCTCGCTG 60.395 60.000 0.00 0.00 0.00 5.18
613 616 1.437160 CTCTTCCTCCTCTCGCTGC 59.563 63.158 0.00 0.00 0.00 5.25
614 617 2.015227 CTCTTCCTCCTCTCGCTGCC 62.015 65.000 0.00 0.00 0.00 4.85
615 618 2.038007 TTCCTCCTCTCGCTGCCT 59.962 61.111 0.00 0.00 0.00 4.75
616 619 2.015227 CTTCCTCCTCTCGCTGCCTC 62.015 65.000 0.00 0.00 0.00 4.70
617 620 3.535962 CCTCCTCTCGCTGCCTCC 61.536 72.222 0.00 0.00 0.00 4.30
618 621 3.535962 CTCCTCTCGCTGCCTCCC 61.536 72.222 0.00 0.00 0.00 4.30
634 637 2.041928 CCCCCTTGCTCCTCTCCT 59.958 66.667 0.00 0.00 0.00 3.69
635 638 2.069430 CCCCCTTGCTCCTCTCCTC 61.069 68.421 0.00 0.00 0.00 3.71
636 639 1.002792 CCCCTTGCTCCTCTCCTCT 59.997 63.158 0.00 0.00 0.00 3.69
637 640 1.048160 CCCCTTGCTCCTCTCCTCTC 61.048 65.000 0.00 0.00 0.00 3.20
638 641 0.032217 CCCTTGCTCCTCTCCTCTCT 60.032 60.000 0.00 0.00 0.00 3.10
639 642 1.113788 CCTTGCTCCTCTCCTCTCTG 58.886 60.000 0.00 0.00 0.00 3.35
640 643 0.461135 CTTGCTCCTCTCCTCTCTGC 59.539 60.000 0.00 0.00 0.00 4.26
641 644 0.040942 TTGCTCCTCTCCTCTCTGCT 59.959 55.000 0.00 0.00 0.00 4.24
642 645 0.922626 TGCTCCTCTCCTCTCTGCTA 59.077 55.000 0.00 0.00 0.00 3.49
643 646 1.498576 TGCTCCTCTCCTCTCTGCTAT 59.501 52.381 0.00 0.00 0.00 2.97
644 647 2.162681 GCTCCTCTCCTCTCTGCTATC 58.837 57.143 0.00 0.00 0.00 2.08
645 648 2.224867 GCTCCTCTCCTCTCTGCTATCT 60.225 54.545 0.00 0.00 0.00 1.98
646 649 3.679389 CTCCTCTCCTCTCTGCTATCTC 58.321 54.545 0.00 0.00 0.00 2.75
647 650 3.326521 TCCTCTCCTCTCTGCTATCTCT 58.673 50.000 0.00 0.00 0.00 3.10
648 651 3.327757 TCCTCTCCTCTCTGCTATCTCTC 59.672 52.174 0.00 0.00 0.00 3.20
649 652 3.328931 CCTCTCCTCTCTGCTATCTCTCT 59.671 52.174 0.00 0.00 0.00 3.10
650 653 4.321718 CTCTCCTCTCTGCTATCTCTCTG 58.678 52.174 0.00 0.00 0.00 3.35
651 654 3.973305 TCTCCTCTCTGCTATCTCTCTGA 59.027 47.826 0.00 0.00 0.00 3.27
652 655 4.040829 TCTCCTCTCTGCTATCTCTCTGAG 59.959 50.000 0.00 0.00 0.00 3.35
653 656 3.973305 TCCTCTCTGCTATCTCTCTGAGA 59.027 47.826 7.24 7.24 43.20 3.27
655 658 4.940046 CCTCTCTGCTATCTCTCTGAGATC 59.060 50.000 12.64 2.20 45.03 2.75
656 659 5.280368 CCTCTCTGCTATCTCTCTGAGATCT 60.280 48.000 12.64 0.00 45.03 2.75
657 660 6.191657 TCTCTGCTATCTCTCTGAGATCTT 57.808 41.667 12.64 0.00 45.03 2.40
658 661 6.233434 TCTCTGCTATCTCTCTGAGATCTTC 58.767 44.000 12.64 5.41 45.03 2.87
659 662 5.316167 TCTGCTATCTCTCTGAGATCTTCC 58.684 45.833 12.64 0.00 45.03 3.46
660 663 5.073554 TCTGCTATCTCTCTGAGATCTTCCT 59.926 44.000 12.64 0.00 45.03 3.36
661 664 5.704354 TGCTATCTCTCTGAGATCTTCCTT 58.296 41.667 12.64 0.00 45.03 3.36
662 665 6.135454 TGCTATCTCTCTGAGATCTTCCTTT 58.865 40.000 12.64 0.00 45.03 3.11
663 666 6.040729 TGCTATCTCTCTGAGATCTTCCTTTG 59.959 42.308 12.64 0.00 45.03 2.77
664 667 4.734398 TCTCTCTGAGATCTTCCTTTGC 57.266 45.455 8.00 0.00 33.35 3.68
665 668 3.450457 TCTCTCTGAGATCTTCCTTTGCC 59.550 47.826 8.00 0.00 33.35 4.52
666 669 2.503356 TCTCTGAGATCTTCCTTTGCCC 59.497 50.000 2.58 0.00 0.00 5.36
667 670 1.561542 TCTGAGATCTTCCTTTGCCCC 59.438 52.381 0.00 0.00 0.00 5.80
668 671 1.563410 CTGAGATCTTCCTTTGCCCCT 59.437 52.381 0.00 0.00 0.00 4.79
669 672 1.995542 TGAGATCTTCCTTTGCCCCTT 59.004 47.619 0.00 0.00 0.00 3.95
670 673 2.025887 TGAGATCTTCCTTTGCCCCTTC 60.026 50.000 0.00 0.00 0.00 3.46
671 674 1.286257 AGATCTTCCTTTGCCCCTTCC 59.714 52.381 0.00 0.00 0.00 3.46
672 675 1.286257 GATCTTCCTTTGCCCCTTCCT 59.714 52.381 0.00 0.00 0.00 3.36
673 676 0.698818 TCTTCCTTTGCCCCTTCCTC 59.301 55.000 0.00 0.00 0.00 3.71
674 677 0.678048 CTTCCTTTGCCCCTTCCTCG 60.678 60.000 0.00 0.00 0.00 4.63
675 678 2.751837 CCTTTGCCCCTTCCTCGC 60.752 66.667 0.00 0.00 0.00 5.03
676 679 2.751837 CTTTGCCCCTTCCTCGCC 60.752 66.667 0.00 0.00 0.00 5.54
677 680 4.715523 TTTGCCCCTTCCTCGCCG 62.716 66.667 0.00 0.00 0.00 6.46
693 696 3.011583 CGCCGGCGAATTCTTACC 58.988 61.111 44.86 0.00 42.83 2.85
694 697 2.867091 CGCCGGCGAATTCTTACCG 61.867 63.158 44.86 18.99 45.21 4.02
695 698 3.011583 CCGGCGAATTCTTACCGC 58.988 61.111 19.99 11.69 44.29 5.68
699 702 3.364277 GCGAATTCTTACCGCCTCT 57.636 52.632 3.52 0.00 42.77 3.69
700 703 2.503920 GCGAATTCTTACCGCCTCTA 57.496 50.000 3.52 0.00 42.77 2.43
701 704 2.395654 GCGAATTCTTACCGCCTCTAG 58.604 52.381 3.52 0.00 42.77 2.43
702 705 2.862921 GCGAATTCTTACCGCCTCTAGG 60.863 54.545 3.52 0.00 42.77 3.02
703 706 2.361438 CGAATTCTTACCGCCTCTAGGT 59.639 50.000 3.52 0.00 45.28 3.08
704 707 3.550436 CGAATTCTTACCGCCTCTAGGTC 60.550 52.174 3.52 0.00 42.81 3.85
705 708 1.386533 TTCTTACCGCCTCTAGGTCG 58.613 55.000 0.00 2.26 42.81 4.79
706 709 0.254178 TCTTACCGCCTCTAGGTCGT 59.746 55.000 10.48 4.43 42.81 4.34
707 710 0.381089 CTTACCGCCTCTAGGTCGTG 59.619 60.000 10.48 6.17 42.81 4.35
708 711 0.035152 TTACCGCCTCTAGGTCGTGA 60.035 55.000 10.48 0.00 42.81 4.35
709 712 0.745845 TACCGCCTCTAGGTCGTGAC 60.746 60.000 10.48 0.00 42.81 3.67
733 736 1.073923 AGGAACCTACAAAGCCACTGG 59.926 52.381 0.00 0.00 0.00 4.00
768 771 4.140354 CCCCTAGTTTCCGGGTCA 57.860 61.111 0.00 0.00 38.88 4.02
779 782 4.692475 CGGGTCAACGGGTCCACC 62.692 72.222 0.00 0.00 0.00 4.61
924 927 3.567397 TCTCCTATTTCTTCTCTCCGGG 58.433 50.000 0.00 0.00 0.00 5.73
993 997 1.285950 CGATCCGGATAGCGCAAGA 59.714 57.895 19.15 0.00 43.02 3.02
1066 1070 8.986847 GTAGATTCCATGTAAGATCTGTTCATG 58.013 37.037 19.40 19.40 36.60 3.07
1148 1152 1.597663 CCTGCCCGATTCGTCAAATAC 59.402 52.381 5.20 0.00 0.00 1.89
1239 1243 7.917505 AGTTTTCTAGAAAAACATCAACAGCTG 59.082 33.333 27.81 13.48 41.37 4.24
1277 1281 8.645110 GGGAATCATTTGGACAATATCATCTTT 58.355 33.333 0.00 0.00 0.00 2.52
1290 1294 7.288621 ACAATATCATCTTTTGGATTCCTTCCC 59.711 37.037 3.95 0.00 44.77 3.97
1468 1473 2.041922 AGGACATAGAGGCGGCCA 60.042 61.111 23.09 0.00 0.00 5.36
1536 1542 5.435686 ACATACTAGCACCAATTCCAGAA 57.564 39.130 0.00 0.00 0.00 3.02
1662 1669 1.897802 CCAAAAAGAGGAAGGCTGCAT 59.102 47.619 0.50 0.00 0.00 3.96
2060 2068 8.717821 GCGGCATTTCTAGATTATTTATGTGTA 58.282 33.333 0.00 0.00 0.00 2.90
2131 2139 4.082026 ACAAATTATGAGCTTCAACCCTGC 60.082 41.667 0.00 0.00 0.00 4.85
2391 2460 7.636150 ATTATAGAGCATATGAATTGGTGGC 57.364 36.000 6.97 0.00 0.00 5.01
2392 2461 3.589951 AGAGCATATGAATTGGTGGCT 57.410 42.857 6.97 0.00 0.00 4.75
2393 2462 3.907221 AGAGCATATGAATTGGTGGCTT 58.093 40.909 6.97 0.00 0.00 4.35
2394 2463 3.635373 AGAGCATATGAATTGGTGGCTTG 59.365 43.478 6.97 0.00 0.00 4.01
2395 2464 2.696707 AGCATATGAATTGGTGGCTTGG 59.303 45.455 6.97 0.00 0.00 3.61
2396 2465 2.431782 GCATATGAATTGGTGGCTTGGT 59.568 45.455 6.97 0.00 0.00 3.67
2397 2466 3.738899 GCATATGAATTGGTGGCTTGGTG 60.739 47.826 6.97 0.00 0.00 4.17
2449 2518 7.226720 GGAGACATGTCTTGTTTAAGAACAGAA 59.773 37.037 28.46 0.00 45.80 3.02
2657 2727 4.522114 TGTTCGGATTCATTTCTGCCATA 58.478 39.130 0.00 0.00 0.00 2.74
2658 2728 5.132502 TGTTCGGATTCATTTCTGCCATAT 58.867 37.500 0.00 0.00 0.00 1.78
2659 2729 5.593909 TGTTCGGATTCATTTCTGCCATATT 59.406 36.000 0.00 0.00 0.00 1.28
2660 2730 5.694231 TCGGATTCATTTCTGCCATATTG 57.306 39.130 0.00 0.00 0.00 1.90
2757 2846 9.288576 TCATTTGTGTTTCTTCATGTATCTTCT 57.711 29.630 0.00 0.00 0.00 2.85
2888 2977 8.621532 TGTAAGTGATCAGAATTAAACTGCTT 57.378 30.769 0.00 0.00 35.61 3.91
3149 3238 4.638865 TCCGATCAAACGATCAGAGTAAGA 59.361 41.667 0.00 0.00 39.50 2.10
3344 3434 4.461431 TCAGCAGAGCAAAATCATTGTGAT 59.539 37.500 0.00 0.00 39.09 3.06
3406 3496 4.927425 GCTTGTTTCTGATGTGATTTGCAT 59.073 37.500 0.00 0.00 0.00 3.96
3477 3567 9.343539 AGTCAAAATCTTATCCTTAATACTGGC 57.656 33.333 0.00 0.00 0.00 4.85
3506 3596 7.274033 CCTGTTGTGCAATGTGAATTTACTATG 59.726 37.037 1.75 2.42 0.00 2.23
3507 3597 7.656412 TGTTGTGCAATGTGAATTTACTATGT 58.344 30.769 1.75 0.00 0.00 2.29
3508 3598 8.787852 TGTTGTGCAATGTGAATTTACTATGTA 58.212 29.630 1.75 0.00 0.00 2.29
3509 3599 9.787532 GTTGTGCAATGTGAATTTACTATGTAT 57.212 29.630 1.75 0.00 0.00 2.29
3513 3603 8.769891 TGCAATGTGAATTTACTATGTATACCG 58.230 33.333 0.00 0.00 0.00 4.02
3623 3713 7.046033 ACGTGAAATTTACCTAGGTTATCTGG 58.954 38.462 22.11 9.62 0.00 3.86
3635 3725 6.264970 CCTAGGTTATCTGGTAGTCCTGTAAC 59.735 46.154 0.00 0.00 33.77 2.50
3655 3745 2.952310 ACCTCCAACTGAAAACAAGAGC 59.048 45.455 0.00 0.00 0.00 4.09
3673 3763 0.030638 GCAGGCGCTCTTGTGAAAAA 59.969 50.000 7.64 0.00 34.30 1.94
3674 3764 1.758783 CAGGCGCTCTTGTGAAAAAC 58.241 50.000 7.64 0.00 0.00 2.43
3675 3765 1.334869 CAGGCGCTCTTGTGAAAAACT 59.665 47.619 7.64 0.00 0.00 2.66
3676 3766 1.334869 AGGCGCTCTTGTGAAAAACTG 59.665 47.619 7.64 0.00 0.00 3.16
3677 3767 1.333619 GGCGCTCTTGTGAAAAACTGA 59.666 47.619 7.64 0.00 0.00 3.41
3678 3768 2.603173 GGCGCTCTTGTGAAAAACTGAG 60.603 50.000 7.64 0.00 35.00 3.35
3679 3769 2.603173 GCGCTCTTGTGAAAAACTGAGG 60.603 50.000 0.00 0.00 33.57 3.86
3680 3770 2.603173 CGCTCTTGTGAAAAACTGAGGC 60.603 50.000 0.00 0.00 33.57 4.70
3681 3771 2.287849 GCTCTTGTGAAAAACTGAGGCC 60.288 50.000 0.00 0.00 33.57 5.19
3682 3772 3.217626 CTCTTGTGAAAAACTGAGGCCT 58.782 45.455 3.86 3.86 31.15 5.19
3683 3773 3.214328 TCTTGTGAAAAACTGAGGCCTC 58.786 45.455 26.78 26.78 0.00 4.70
3684 3774 1.981256 TGTGAAAAACTGAGGCCTCC 58.019 50.000 29.95 12.91 0.00 4.30
3685 3775 1.494721 TGTGAAAAACTGAGGCCTCCT 59.505 47.619 29.95 12.36 36.03 3.69
3686 3776 2.091885 TGTGAAAAACTGAGGCCTCCTT 60.092 45.455 29.95 17.75 31.76 3.36
3687 3777 2.959030 GTGAAAAACTGAGGCCTCCTTT 59.041 45.455 29.95 22.24 31.76 3.11
3688 3778 2.958355 TGAAAAACTGAGGCCTCCTTTG 59.042 45.455 29.95 18.42 31.76 2.77
3689 3779 3.222603 GAAAAACTGAGGCCTCCTTTGA 58.777 45.455 29.95 10.03 31.76 2.69
3690 3780 3.532641 AAAACTGAGGCCTCCTTTGAT 57.467 42.857 29.95 12.16 31.76 2.57
3691 3781 3.532641 AAACTGAGGCCTCCTTTGATT 57.467 42.857 29.95 14.46 31.76 2.57
3692 3782 3.532641 AACTGAGGCCTCCTTTGATTT 57.467 42.857 29.95 8.48 31.76 2.17
3693 3783 4.657814 AACTGAGGCCTCCTTTGATTTA 57.342 40.909 29.95 6.89 31.76 1.40
3694 3784 3.956744 ACTGAGGCCTCCTTTGATTTAC 58.043 45.455 29.95 1.07 31.76 2.01
3695 3785 3.330701 ACTGAGGCCTCCTTTGATTTACA 59.669 43.478 29.95 6.24 31.76 2.41
3696 3786 3.944015 CTGAGGCCTCCTTTGATTTACAG 59.056 47.826 29.95 12.48 31.76 2.74
3697 3787 3.282885 GAGGCCTCCTTTGATTTACAGG 58.717 50.000 23.19 0.00 31.76 4.00
3698 3788 2.024941 AGGCCTCCTTTGATTTACAGGG 60.025 50.000 0.00 0.00 0.00 4.45
3699 3789 2.291605 GGCCTCCTTTGATTTACAGGGT 60.292 50.000 0.00 0.00 0.00 4.34
3700 3790 3.431415 GCCTCCTTTGATTTACAGGGTT 58.569 45.455 0.00 0.00 0.00 4.11
3701 3791 3.444034 GCCTCCTTTGATTTACAGGGTTC 59.556 47.826 0.00 0.00 0.00 3.62
3702 3792 3.689649 CCTCCTTTGATTTACAGGGTTCG 59.310 47.826 0.00 0.00 0.00 3.95
3703 3793 3.078837 TCCTTTGATTTACAGGGTTCGC 58.921 45.455 0.00 0.00 0.00 4.70
3704 3794 2.817258 CCTTTGATTTACAGGGTTCGCA 59.183 45.455 0.00 0.00 0.00 5.10
3705 3795 3.443681 CCTTTGATTTACAGGGTTCGCAT 59.556 43.478 0.00 0.00 0.00 4.73
3706 3796 4.638421 CCTTTGATTTACAGGGTTCGCATA 59.362 41.667 0.00 0.00 0.00 3.14
3707 3797 5.220854 CCTTTGATTTACAGGGTTCGCATAG 60.221 44.000 0.00 0.00 0.00 2.23
3708 3798 3.804036 TGATTTACAGGGTTCGCATAGG 58.196 45.455 0.00 0.00 0.00 2.57
3709 3799 3.452990 TGATTTACAGGGTTCGCATAGGA 59.547 43.478 0.00 0.00 0.00 2.94
3710 3800 3.985019 TTTACAGGGTTCGCATAGGAA 57.015 42.857 0.00 0.00 0.00 3.36
3711 3801 4.497291 TTTACAGGGTTCGCATAGGAAT 57.503 40.909 0.00 0.00 0.00 3.01
3712 3802 4.497291 TTACAGGGTTCGCATAGGAATT 57.503 40.909 0.00 0.00 0.00 2.17
3713 3803 3.366052 ACAGGGTTCGCATAGGAATTT 57.634 42.857 0.00 0.00 0.00 1.82
3714 3804 3.697166 ACAGGGTTCGCATAGGAATTTT 58.303 40.909 0.00 0.00 0.00 1.82
3715 3805 4.850680 ACAGGGTTCGCATAGGAATTTTA 58.149 39.130 0.00 0.00 0.00 1.52
3716 3806 4.638865 ACAGGGTTCGCATAGGAATTTTAC 59.361 41.667 0.00 0.00 0.00 2.01
3717 3807 4.638421 CAGGGTTCGCATAGGAATTTTACA 59.362 41.667 0.00 0.00 0.00 2.41
3718 3808 4.881850 AGGGTTCGCATAGGAATTTTACAG 59.118 41.667 0.00 0.00 0.00 2.74
3719 3809 4.036380 GGGTTCGCATAGGAATTTTACAGG 59.964 45.833 0.00 0.00 0.00 4.00
3720 3810 4.879545 GGTTCGCATAGGAATTTTACAGGA 59.120 41.667 0.00 0.00 0.00 3.86
3721 3811 5.531287 GGTTCGCATAGGAATTTTACAGGAT 59.469 40.000 0.00 0.00 0.00 3.24
3722 3812 6.039382 GGTTCGCATAGGAATTTTACAGGATT 59.961 38.462 0.00 0.00 0.00 3.01
3723 3813 6.618287 TCGCATAGGAATTTTACAGGATTG 57.382 37.500 0.00 0.00 0.00 2.67
3724 3814 6.353323 TCGCATAGGAATTTTACAGGATTGA 58.647 36.000 0.00 0.00 0.00 2.57
3725 3815 6.260050 TCGCATAGGAATTTTACAGGATTGAC 59.740 38.462 0.00 0.00 0.00 3.18
3726 3816 6.038161 CGCATAGGAATTTTACAGGATTGACA 59.962 38.462 0.00 0.00 0.00 3.58
3727 3817 7.196331 GCATAGGAATTTTACAGGATTGACAC 58.804 38.462 0.00 0.00 0.00 3.67
3728 3818 7.682021 GCATAGGAATTTTACAGGATTGACACC 60.682 40.741 0.00 0.00 0.00 4.16
3729 3819 5.016831 AGGAATTTTACAGGATTGACACCC 58.983 41.667 0.00 0.00 0.00 4.61
3730 3820 5.016831 GGAATTTTACAGGATTGACACCCT 58.983 41.667 0.00 0.00 0.00 4.34
3731 3821 5.125578 GGAATTTTACAGGATTGACACCCTC 59.874 44.000 0.00 0.00 0.00 4.30
3732 3822 4.993705 TTTTACAGGATTGACACCCTCT 57.006 40.909 0.00 0.00 0.00 3.69
3733 3823 3.981071 TTACAGGATTGACACCCTCTG 57.019 47.619 0.00 0.00 0.00 3.35
3734 3824 2.030027 ACAGGATTGACACCCTCTGA 57.970 50.000 0.00 0.00 0.00 3.27
3735 3825 2.338809 ACAGGATTGACACCCTCTGAA 58.661 47.619 0.00 0.00 0.00 3.02
3736 3826 2.711009 ACAGGATTGACACCCTCTGAAA 59.289 45.455 0.00 0.00 0.00 2.69
3737 3827 3.331889 ACAGGATTGACACCCTCTGAAAT 59.668 43.478 0.00 0.00 0.00 2.17
3738 3828 4.202609 ACAGGATTGACACCCTCTGAAATT 60.203 41.667 0.00 0.00 0.00 1.82
3739 3829 4.768968 CAGGATTGACACCCTCTGAAATTT 59.231 41.667 0.00 0.00 0.00 1.82
3740 3830 5.244626 CAGGATTGACACCCTCTGAAATTTT 59.755 40.000 0.00 0.00 0.00 1.82
3741 3831 5.478332 AGGATTGACACCCTCTGAAATTTTC 59.522 40.000 2.05 2.05 0.00 2.29
3742 3832 5.336770 GGATTGACACCCTCTGAAATTTTCC 60.337 44.000 6.68 0.00 0.00 3.13
3743 3833 3.496331 TGACACCCTCTGAAATTTTCCC 58.504 45.455 6.68 0.00 0.00 3.97
3744 3834 3.140144 TGACACCCTCTGAAATTTTCCCT 59.860 43.478 6.68 0.00 0.00 4.20
3745 3835 4.152647 GACACCCTCTGAAATTTTCCCTT 58.847 43.478 6.68 0.00 0.00 3.95
3746 3836 4.556697 ACACCCTCTGAAATTTTCCCTTT 58.443 39.130 6.68 0.00 0.00 3.11
3747 3837 5.711698 ACACCCTCTGAAATTTTCCCTTTA 58.288 37.500 6.68 0.00 0.00 1.85
3748 3838 5.538813 ACACCCTCTGAAATTTTCCCTTTAC 59.461 40.000 6.68 0.00 0.00 2.01
3749 3839 5.538433 CACCCTCTGAAATTTTCCCTTTACA 59.462 40.000 6.68 0.00 0.00 2.41
3750 3840 6.211384 CACCCTCTGAAATTTTCCCTTTACAT 59.789 38.462 6.68 0.00 0.00 2.29
3751 3841 6.211384 ACCCTCTGAAATTTTCCCTTTACATG 59.789 38.462 6.68 0.00 0.00 3.21
3752 3842 6.211384 CCCTCTGAAATTTTCCCTTTACATGT 59.789 38.462 2.69 2.69 0.00 3.21
3753 3843 7.256296 CCCTCTGAAATTTTCCCTTTACATGTT 60.256 37.037 2.30 0.00 0.00 2.71
3754 3844 7.599998 CCTCTGAAATTTTCCCTTTACATGTTG 59.400 37.037 2.30 0.00 0.00 3.33
3755 3845 8.017418 TCTGAAATTTTCCCTTTACATGTTGT 57.983 30.769 2.30 0.00 0.00 3.32
3756 3846 8.482128 TCTGAAATTTTCCCTTTACATGTTGTT 58.518 29.630 2.30 0.00 0.00 2.83
3757 3847 9.108284 CTGAAATTTTCCCTTTACATGTTGTTT 57.892 29.630 2.30 0.00 0.00 2.83
3758 3848 8.887717 TGAAATTTTCCCTTTACATGTTGTTTG 58.112 29.630 2.30 0.00 0.00 2.93
3759 3849 9.103861 GAAATTTTCCCTTTACATGTTGTTTGA 57.896 29.630 2.30 0.00 0.00 2.69
3760 3850 9.625747 AAATTTTCCCTTTACATGTTGTTTGAT 57.374 25.926 2.30 0.00 0.00 2.57
3761 3851 9.625747 AATTTTCCCTTTACATGTTGTTTGATT 57.374 25.926 2.30 0.00 0.00 2.57
3762 3852 8.655651 TTTTCCCTTTACATGTTGTTTGATTC 57.344 30.769 2.30 0.00 0.00 2.52
3763 3853 6.007936 TCCCTTTACATGTTGTTTGATTCG 57.992 37.500 2.30 0.00 0.00 3.34
3764 3854 5.533154 TCCCTTTACATGTTGTTTGATTCGT 59.467 36.000 2.30 0.00 0.00 3.85
3765 3855 6.711194 TCCCTTTACATGTTGTTTGATTCGTA 59.289 34.615 2.30 0.00 0.00 3.43
3766 3856 7.021196 CCCTTTACATGTTGTTTGATTCGTAG 58.979 38.462 2.30 0.00 0.00 3.51
3767 3857 7.021196 CCTTTACATGTTGTTTGATTCGTAGG 58.979 38.462 2.30 0.00 0.00 3.18
3768 3858 7.094975 CCTTTACATGTTGTTTGATTCGTAGGA 60.095 37.037 2.30 0.00 0.00 2.94
3769 3859 7.915293 TTACATGTTGTTTGATTCGTAGGAT 57.085 32.000 2.30 0.00 0.00 3.24
3770 3860 6.817765 ACATGTTGTTTGATTCGTAGGATT 57.182 33.333 0.00 0.00 0.00 3.01
3771 3861 6.611381 ACATGTTGTTTGATTCGTAGGATTG 58.389 36.000 0.00 0.00 0.00 2.67
3772 3862 5.041951 TGTTGTTTGATTCGTAGGATTGC 57.958 39.130 0.00 0.00 0.00 3.56
3773 3863 4.517075 TGTTGTTTGATTCGTAGGATTGCA 59.483 37.500 0.00 0.00 0.00 4.08
3774 3864 5.182950 TGTTGTTTGATTCGTAGGATTGCAT 59.817 36.000 0.00 0.00 0.00 3.96
3775 3865 5.895636 TGTTTGATTCGTAGGATTGCATT 57.104 34.783 0.00 0.00 0.00 3.56
3776 3866 5.879237 TGTTTGATTCGTAGGATTGCATTC 58.121 37.500 0.00 0.00 0.00 2.67
3777 3867 5.163663 TGTTTGATTCGTAGGATTGCATTCC 60.164 40.000 18.11 18.11 35.90 3.01
3779 3869 4.380531 TGATTCGTAGGATTGCATTCCTC 58.619 43.478 28.83 19.75 42.71 3.71
3780 3870 3.904800 TTCGTAGGATTGCATTCCTCA 57.095 42.857 28.83 14.43 42.71 3.86
3781 3871 3.459232 TCGTAGGATTGCATTCCTCAG 57.541 47.619 28.83 23.03 42.71 3.35
3782 3872 2.103094 TCGTAGGATTGCATTCCTCAGG 59.897 50.000 28.83 19.70 42.71 3.86
3783 3873 2.103094 CGTAGGATTGCATTCCTCAGGA 59.897 50.000 28.83 12.55 42.71 3.86
3784 3874 3.432186 CGTAGGATTGCATTCCTCAGGAA 60.432 47.826 28.83 9.12 42.71 3.36
3785 3875 3.010200 AGGATTGCATTCCTCAGGAAC 57.990 47.619 21.84 0.00 45.07 3.62
3786 3876 2.027385 GGATTGCATTCCTCAGGAACC 58.973 52.381 8.82 3.46 45.07 3.62
3787 3877 2.621407 GGATTGCATTCCTCAGGAACCA 60.621 50.000 8.82 6.40 45.07 3.67
3788 3878 2.673775 TTGCATTCCTCAGGAACCAA 57.326 45.000 8.82 12.48 45.07 3.67
3789 3879 2.905415 TGCATTCCTCAGGAACCAAT 57.095 45.000 8.82 0.00 45.07 3.16
3790 3880 2.726821 TGCATTCCTCAGGAACCAATC 58.273 47.619 8.82 0.00 45.07 2.67
3791 3881 2.309755 TGCATTCCTCAGGAACCAATCT 59.690 45.455 8.82 0.00 45.07 2.40
3792 3882 3.245371 TGCATTCCTCAGGAACCAATCTT 60.245 43.478 8.82 0.00 45.07 2.40
3793 3883 4.018506 TGCATTCCTCAGGAACCAATCTTA 60.019 41.667 8.82 0.00 45.07 2.10
3794 3884 5.136105 GCATTCCTCAGGAACCAATCTTAT 58.864 41.667 8.82 0.00 45.07 1.73
3795 3885 6.126507 TGCATTCCTCAGGAACCAATCTTATA 60.127 38.462 8.82 0.00 45.07 0.98
3796 3886 6.429385 GCATTCCTCAGGAACCAATCTTATAG 59.571 42.308 8.82 0.00 45.07 1.31
3797 3887 6.500589 TTCCTCAGGAACCAATCTTATAGG 57.499 41.667 0.34 0.00 36.71 2.57
3798 3888 5.788430 TCCTCAGGAACCAATCTTATAGGA 58.212 41.667 0.00 0.00 30.49 2.94
3799 3889 6.209774 TCCTCAGGAACCAATCTTATAGGAA 58.790 40.000 0.00 0.00 30.22 3.36
3800 3890 6.099845 TCCTCAGGAACCAATCTTATAGGAAC 59.900 42.308 0.00 0.00 30.22 3.62
3801 3891 6.100424 CCTCAGGAACCAATCTTATAGGAACT 59.900 42.308 0.00 0.00 46.37 3.01
3802 3892 7.366011 CCTCAGGAACCAATCTTATAGGAACTT 60.366 40.741 0.00 0.00 41.75 2.66
3803 3893 7.565680 TCAGGAACCAATCTTATAGGAACTTC 58.434 38.462 0.00 0.00 41.75 3.01
3804 3894 7.403231 TCAGGAACCAATCTTATAGGAACTTCT 59.597 37.037 0.00 0.00 41.75 2.85
3805 3895 8.049721 CAGGAACCAATCTTATAGGAACTTCTT 58.950 37.037 0.00 0.00 41.75 2.52
3806 3896 9.280456 AGGAACCAATCTTATAGGAACTTCTTA 57.720 33.333 0.00 0.00 41.75 2.10
3807 3897 9.549078 GGAACCAATCTTATAGGAACTTCTTAG 57.451 37.037 0.00 0.00 41.75 2.18
3821 3911 5.941948 ACTTCTTAGTTCATTTTCACGGG 57.058 39.130 0.00 0.00 0.00 5.28
3822 3912 5.617252 ACTTCTTAGTTCATTTTCACGGGA 58.383 37.500 0.00 0.00 0.00 5.14
3823 3913 6.059484 ACTTCTTAGTTCATTTTCACGGGAA 58.941 36.000 0.00 0.00 0.00 3.97
3824 3914 6.544564 ACTTCTTAGTTCATTTTCACGGGAAA 59.455 34.615 9.22 9.22 41.13 3.13
3832 3922 3.810310 TTTTCACGGGAAAACAAGCAT 57.190 38.095 21.33 0.00 45.51 3.79
3833 3923 2.791383 TTCACGGGAAAACAAGCATG 57.209 45.000 0.00 0.00 0.00 4.06
3834 3924 1.974265 TCACGGGAAAACAAGCATGA 58.026 45.000 0.00 0.00 0.00 3.07
3835 3925 1.879380 TCACGGGAAAACAAGCATGAG 59.121 47.619 0.00 0.00 0.00 2.90
3836 3926 1.068333 CACGGGAAAACAAGCATGAGG 60.068 52.381 0.00 0.00 0.00 3.86
3837 3927 1.247567 CGGGAAAACAAGCATGAGGT 58.752 50.000 0.00 0.00 0.00 3.85
3838 3928 1.613437 CGGGAAAACAAGCATGAGGTT 59.387 47.619 0.00 0.00 35.46 3.50
3846 3936 2.787994 CAAGCATGAGGTTGGACTTCT 58.212 47.619 0.00 0.00 46.65 2.85
3847 3937 3.152341 CAAGCATGAGGTTGGACTTCTT 58.848 45.455 0.00 0.00 46.65 2.52
3848 3938 2.787994 AGCATGAGGTTGGACTTCTTG 58.212 47.619 0.00 2.92 34.12 3.02
3849 3939 1.815003 GCATGAGGTTGGACTTCTTGG 59.185 52.381 0.00 0.00 32.45 3.61
3850 3940 2.553028 GCATGAGGTTGGACTTCTTGGA 60.553 50.000 0.00 0.00 32.45 3.53
3851 3941 3.754965 CATGAGGTTGGACTTCTTGGAA 58.245 45.455 0.00 0.00 29.58 3.53
3852 3942 3.943671 TGAGGTTGGACTTCTTGGAAA 57.056 42.857 0.00 0.00 0.00 3.13
3853 3943 4.243793 TGAGGTTGGACTTCTTGGAAAA 57.756 40.909 0.00 0.00 0.00 2.29
3854 3944 4.605183 TGAGGTTGGACTTCTTGGAAAAA 58.395 39.130 0.00 0.00 0.00 1.94
3877 3967 8.539117 AAAATCCTCTATTTTCCTACCCAATG 57.461 34.615 0.00 0.00 42.88 2.82
3878 3968 6.848562 ATCCTCTATTTTCCTACCCAATGT 57.151 37.500 0.00 0.00 0.00 2.71
3879 3969 7.947782 ATCCTCTATTTTCCTACCCAATGTA 57.052 36.000 0.00 0.00 0.00 2.29
3880 3970 7.374975 TCCTCTATTTTCCTACCCAATGTAG 57.625 40.000 0.00 0.00 45.55 2.74
3891 3981 3.968265 ACCCAATGTAGGATTTCAGTGG 58.032 45.455 4.93 4.93 45.53 4.00
3895 3985 5.808042 CAATGTAGGATTTCAGTGGACAG 57.192 43.478 0.00 0.00 0.00 3.51
3896 3986 5.248640 CAATGTAGGATTTCAGTGGACAGT 58.751 41.667 0.00 0.00 0.00 3.55
3897 3987 6.406370 CAATGTAGGATTTCAGTGGACAGTA 58.594 40.000 0.00 0.00 0.00 2.74
3898 3988 5.401531 TGTAGGATTTCAGTGGACAGTAC 57.598 43.478 0.00 0.00 0.00 2.73
3899 3989 4.836175 TGTAGGATTTCAGTGGACAGTACA 59.164 41.667 0.00 0.00 0.00 2.90
3900 3990 5.483937 TGTAGGATTTCAGTGGACAGTACAT 59.516 40.000 0.00 0.00 0.00 2.29
3901 3991 5.091261 AGGATTTCAGTGGACAGTACATC 57.909 43.478 0.00 0.00 0.00 3.06
3902 3992 4.080863 AGGATTTCAGTGGACAGTACATCC 60.081 45.833 8.85 8.85 36.70 3.51
3903 3993 4.080863 GGATTTCAGTGGACAGTACATCCT 60.081 45.833 15.16 0.00 37.13 3.24
3904 3994 5.128827 GGATTTCAGTGGACAGTACATCCTA 59.871 44.000 15.16 2.30 37.13 2.94
3905 3995 6.183361 GGATTTCAGTGGACAGTACATCCTAT 60.183 42.308 15.16 3.69 37.13 2.57
3906 3996 6.620877 TTTCAGTGGACAGTACATCCTATT 57.379 37.500 15.16 1.45 37.13 1.73
3907 3997 5.854010 TCAGTGGACAGTACATCCTATTC 57.146 43.478 15.16 5.81 37.13 1.75
3908 3998 5.519808 TCAGTGGACAGTACATCCTATTCT 58.480 41.667 15.16 7.45 37.13 2.40
3909 3999 5.958380 TCAGTGGACAGTACATCCTATTCTT 59.042 40.000 15.16 0.00 37.13 2.52
3910 4000 6.045318 CAGTGGACAGTACATCCTATTCTTG 58.955 44.000 15.16 0.00 37.13 3.02
3911 4001 5.721960 AGTGGACAGTACATCCTATTCTTGT 59.278 40.000 15.16 0.00 37.13 3.16
3912 4002 6.895756 AGTGGACAGTACATCCTATTCTTGTA 59.104 38.462 15.16 0.00 37.13 2.41
3913 4003 6.979238 GTGGACAGTACATCCTATTCTTGTAC 59.021 42.308 15.16 4.67 43.77 2.90
3914 4004 6.183360 TGGACAGTACATCCTATTCTTGTACG 60.183 42.308 15.16 5.32 46.47 3.67
3915 4005 6.183360 GGACAGTACATCCTATTCTTGTACGT 60.183 42.308 8.57 0.00 46.47 3.57
3916 4006 7.166691 ACAGTACATCCTATTCTTGTACGTT 57.833 36.000 0.00 0.00 46.47 3.99
3917 4007 7.609056 ACAGTACATCCTATTCTTGTACGTTT 58.391 34.615 0.00 0.00 46.47 3.60
3918 4008 7.758528 ACAGTACATCCTATTCTTGTACGTTTC 59.241 37.037 0.00 0.00 46.47 2.78
3919 4009 7.222224 CAGTACATCCTATTCTTGTACGTTTCC 59.778 40.741 0.00 0.00 46.47 3.13
3920 4010 6.295719 ACATCCTATTCTTGTACGTTTCCT 57.704 37.500 0.00 0.00 0.00 3.36
3921 4011 7.414222 ACATCCTATTCTTGTACGTTTCCTA 57.586 36.000 0.00 0.00 0.00 2.94
3922 4012 7.263496 ACATCCTATTCTTGTACGTTTCCTAC 58.737 38.462 0.00 0.00 0.00 3.18
3923 4013 6.212888 TCCTATTCTTGTACGTTTCCTACC 57.787 41.667 0.00 0.00 0.00 3.18
3924 4014 5.954150 TCCTATTCTTGTACGTTTCCTACCT 59.046 40.000 0.00 0.00 0.00 3.08
3925 4015 7.118723 TCCTATTCTTGTACGTTTCCTACCTA 58.881 38.462 0.00 0.00 0.00 3.08
3926 4016 7.781693 TCCTATTCTTGTACGTTTCCTACCTAT 59.218 37.037 0.00 0.00 0.00 2.57
3927 4017 8.419442 CCTATTCTTGTACGTTTCCTACCTATT 58.581 37.037 0.00 0.00 0.00 1.73
3928 4018 9.460906 CTATTCTTGTACGTTTCCTACCTATTC 57.539 37.037 0.00 0.00 0.00 1.75
3929 4019 6.212888 TCTTGTACGTTTCCTACCTATTCC 57.787 41.667 0.00 0.00 0.00 3.01
3930 4020 5.954150 TCTTGTACGTTTCCTACCTATTCCT 59.046 40.000 0.00 0.00 0.00 3.36
3931 4021 5.587388 TGTACGTTTCCTACCTATTCCTG 57.413 43.478 0.00 0.00 0.00 3.86
3932 4022 3.538634 ACGTTTCCTACCTATTCCTGC 57.461 47.619 0.00 0.00 0.00 4.85
3933 4023 2.159142 ACGTTTCCTACCTATTCCTGCG 60.159 50.000 0.00 0.00 0.00 5.18
3934 4024 2.210961 GTTTCCTACCTATTCCTGCGC 58.789 52.381 0.00 0.00 0.00 6.09
3935 4025 1.491668 TTCCTACCTATTCCTGCGCA 58.508 50.000 10.98 10.98 0.00 6.09
3936 4026 1.491668 TCCTACCTATTCCTGCGCAA 58.508 50.000 13.05 0.00 0.00 4.85
3937 4027 1.138266 TCCTACCTATTCCTGCGCAAC 59.862 52.381 13.05 0.00 0.00 4.17
3938 4028 1.583054 CTACCTATTCCTGCGCAACC 58.417 55.000 13.05 0.00 0.00 3.77
3939 4029 1.139058 CTACCTATTCCTGCGCAACCT 59.861 52.381 13.05 0.00 0.00 3.50
3940 4030 0.328258 ACCTATTCCTGCGCAACCTT 59.672 50.000 13.05 0.00 0.00 3.50
3941 4031 0.734889 CCTATTCCTGCGCAACCTTG 59.265 55.000 13.05 0.00 0.00 3.61
3942 4032 1.453155 CTATTCCTGCGCAACCTTGT 58.547 50.000 13.05 0.00 0.00 3.16
3943 4033 1.131126 CTATTCCTGCGCAACCTTGTG 59.869 52.381 13.05 0.00 41.43 3.33
3944 4034 0.537143 ATTCCTGCGCAACCTTGTGA 60.537 50.000 13.05 0.00 41.01 3.58
3945 4035 0.749818 TTCCTGCGCAACCTTGTGAA 60.750 50.000 13.05 3.05 41.01 3.18
3946 4036 0.537143 TCCTGCGCAACCTTGTGAAT 60.537 50.000 13.05 0.00 41.01 2.57
3947 4037 0.109597 CCTGCGCAACCTTGTGAATC 60.110 55.000 13.05 0.00 41.01 2.52
3948 4038 0.592637 CTGCGCAACCTTGTGAATCA 59.407 50.000 13.05 0.00 41.01 2.57
3949 4039 1.001487 CTGCGCAACCTTGTGAATCAA 60.001 47.619 13.05 0.00 41.01 2.57
4018 4133 1.613520 CCACTGTCCTACTCCGTCTCA 60.614 57.143 0.00 0.00 0.00 3.27
4027 4142 5.014858 TCCTACTCCGTCTCATTTACAAGT 58.985 41.667 0.00 0.00 0.00 3.16
4044 4159 4.862371 ACAAGTGAGAAAGTTTAACCCCA 58.138 39.130 0.00 0.00 0.00 4.96
4064 4179 6.436218 ACCCCATAACAATAAGTTTGGACTTC 59.564 38.462 0.00 0.00 44.75 3.01
4068 4183 7.094975 CCATAACAATAAGTTTGGACTTCGACA 60.095 37.037 0.00 0.00 44.75 4.35
4129 4244 9.646336 CGTGTAAATTAATATCCTTGTGTTAGC 57.354 33.333 0.00 0.00 0.00 3.09
4146 4261 2.573340 CCGCAACCAAGGCCATTC 59.427 61.111 5.01 0.00 0.00 2.67
4168 4284 7.857734 TTCAGAATAATCGCCTTGTCAATAA 57.142 32.000 0.00 0.00 0.00 1.40
4228 4344 6.869695 TGTAAACAGTGATGGTATGTCGTAT 58.130 36.000 0.00 0.00 0.00 3.06
4229 4345 7.324935 TGTAAACAGTGATGGTATGTCGTATT 58.675 34.615 0.00 0.00 0.00 1.89
4233 4349 7.108841 ACAGTGATGGTATGTCGTATTACTT 57.891 36.000 0.00 0.00 0.00 2.24
4234 4350 6.978659 ACAGTGATGGTATGTCGTATTACTTG 59.021 38.462 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.065709 GGGGCGATCTCCACAACTAAA 60.066 52.381 3.71 0.00 0.00 1.85
78 80 0.536460 CCCGTACACTTTGGCAACCT 60.536 55.000 0.00 0.00 0.00 3.50
154 156 1.831736 CCGTGATTCCACTAAGGGACT 59.168 52.381 0.00 0.00 40.48 3.85
260 262 1.517242 CTTGCGGATGCTAATCTCCC 58.483 55.000 0.00 0.00 43.34 4.30
409 412 8.454106 CAACAACTTATGCTAAGCAAGATAAGT 58.546 33.333 0.00 0.00 43.62 2.24
584 587 0.463474 GAGGAAGAGGAGCATGTGGC 60.463 60.000 0.00 0.00 45.30 5.01
585 588 0.179936 GGAGGAAGAGGAGCATGTGG 59.820 60.000 0.00 0.00 0.00 4.17
586 589 1.138661 GAGGAGGAAGAGGAGCATGTG 59.861 57.143 0.00 0.00 0.00 3.21
587 590 1.008206 AGAGGAGGAAGAGGAGCATGT 59.992 52.381 0.00 0.00 0.00 3.21
588 591 1.688197 GAGAGGAGGAAGAGGAGCATG 59.312 57.143 0.00 0.00 0.00 4.06
589 592 1.753847 CGAGAGGAGGAAGAGGAGCAT 60.754 57.143 0.00 0.00 0.00 3.79
590 593 0.395036 CGAGAGGAGGAAGAGGAGCA 60.395 60.000 0.00 0.00 0.00 4.26
591 594 1.734388 GCGAGAGGAGGAAGAGGAGC 61.734 65.000 0.00 0.00 0.00 4.70
592 595 0.106719 AGCGAGAGGAGGAAGAGGAG 60.107 60.000 0.00 0.00 0.00 3.69
593 596 0.395036 CAGCGAGAGGAGGAAGAGGA 60.395 60.000 0.00 0.00 0.00 3.71
594 597 2.015227 GCAGCGAGAGGAGGAAGAGG 62.015 65.000 0.00 0.00 0.00 3.69
595 598 1.437160 GCAGCGAGAGGAGGAAGAG 59.563 63.158 0.00 0.00 0.00 2.85
596 599 2.055042 GGCAGCGAGAGGAGGAAGA 61.055 63.158 0.00 0.00 0.00 2.87
597 600 2.015227 GAGGCAGCGAGAGGAGGAAG 62.015 65.000 0.00 0.00 0.00 3.46
598 601 2.038007 AGGCAGCGAGAGGAGGAA 59.962 61.111 0.00 0.00 0.00 3.36
599 602 2.441164 GAGGCAGCGAGAGGAGGA 60.441 66.667 0.00 0.00 0.00 3.71
600 603 3.535962 GGAGGCAGCGAGAGGAGG 61.536 72.222 0.00 0.00 0.00 4.30
601 604 3.535962 GGGAGGCAGCGAGAGGAG 61.536 72.222 0.00 0.00 0.00 3.69
617 620 2.041928 AGGAGAGGAGCAAGGGGG 59.958 66.667 0.00 0.00 0.00 5.40
618 621 1.002792 AGAGGAGAGGAGCAAGGGG 59.997 63.158 0.00 0.00 0.00 4.79
619 622 0.032217 AGAGAGGAGAGGAGCAAGGG 60.032 60.000 0.00 0.00 0.00 3.95
620 623 1.113788 CAGAGAGGAGAGGAGCAAGG 58.886 60.000 0.00 0.00 0.00 3.61
621 624 0.461135 GCAGAGAGGAGAGGAGCAAG 59.539 60.000 0.00 0.00 0.00 4.01
622 625 0.040942 AGCAGAGAGGAGAGGAGCAA 59.959 55.000 0.00 0.00 0.00 3.91
623 626 0.922626 TAGCAGAGAGGAGAGGAGCA 59.077 55.000 0.00 0.00 0.00 4.26
624 627 2.162681 GATAGCAGAGAGGAGAGGAGC 58.837 57.143 0.00 0.00 0.00 4.70
625 628 3.328931 AGAGATAGCAGAGAGGAGAGGAG 59.671 52.174 0.00 0.00 0.00 3.69
626 629 3.326521 AGAGATAGCAGAGAGGAGAGGA 58.673 50.000 0.00 0.00 0.00 3.71
627 630 3.328931 AGAGAGATAGCAGAGAGGAGAGG 59.671 52.174 0.00 0.00 0.00 3.69
628 631 4.040829 TCAGAGAGATAGCAGAGAGGAGAG 59.959 50.000 0.00 0.00 0.00 3.20
629 632 3.973305 TCAGAGAGATAGCAGAGAGGAGA 59.027 47.826 0.00 0.00 0.00 3.71
630 633 4.040829 TCTCAGAGAGATAGCAGAGAGGAG 59.959 50.000 0.00 0.00 33.35 3.69
631 634 3.973305 TCTCAGAGAGATAGCAGAGAGGA 59.027 47.826 0.00 0.00 33.35 3.71
632 635 4.356405 TCTCAGAGAGATAGCAGAGAGG 57.644 50.000 0.00 0.00 33.35 3.69
643 646 3.450457 GGCAAAGGAAGATCTCAGAGAGA 59.550 47.826 6.24 1.59 43.20 3.10
644 647 3.432046 GGGCAAAGGAAGATCTCAGAGAG 60.432 52.174 6.24 0.00 0.00 3.20
645 648 2.503356 GGGCAAAGGAAGATCTCAGAGA 59.497 50.000 1.54 1.54 0.00 3.10
646 649 2.421248 GGGGCAAAGGAAGATCTCAGAG 60.421 54.545 0.00 0.00 0.00 3.35
647 650 1.561542 GGGGCAAAGGAAGATCTCAGA 59.438 52.381 0.00 0.00 0.00 3.27
648 651 1.563410 AGGGGCAAAGGAAGATCTCAG 59.437 52.381 0.00 0.00 0.00 3.35
649 652 1.673767 AGGGGCAAAGGAAGATCTCA 58.326 50.000 0.00 0.00 0.00 3.27
650 653 2.649190 GAAGGGGCAAAGGAAGATCTC 58.351 52.381 0.00 0.00 0.00 2.75
651 654 1.286257 GGAAGGGGCAAAGGAAGATCT 59.714 52.381 0.00 0.00 0.00 2.75
652 655 1.286257 AGGAAGGGGCAAAGGAAGATC 59.714 52.381 0.00 0.00 0.00 2.75
653 656 1.286257 GAGGAAGGGGCAAAGGAAGAT 59.714 52.381 0.00 0.00 0.00 2.40
654 657 0.698818 GAGGAAGGGGCAAAGGAAGA 59.301 55.000 0.00 0.00 0.00 2.87
655 658 0.678048 CGAGGAAGGGGCAAAGGAAG 60.678 60.000 0.00 0.00 0.00 3.46
656 659 1.378762 CGAGGAAGGGGCAAAGGAA 59.621 57.895 0.00 0.00 0.00 3.36
657 660 3.077907 CGAGGAAGGGGCAAAGGA 58.922 61.111 0.00 0.00 0.00 3.36
658 661 2.751837 GCGAGGAAGGGGCAAAGG 60.752 66.667 0.00 0.00 0.00 3.11
659 662 2.751837 GGCGAGGAAGGGGCAAAG 60.752 66.667 0.00 0.00 0.00 2.77
660 663 4.715523 CGGCGAGGAAGGGGCAAA 62.716 66.667 0.00 0.00 0.00 3.68
674 677 2.893404 TAAGAATTCGCCGGCGGC 60.893 61.111 44.95 39.60 46.75 6.53
675 678 2.531376 GGTAAGAATTCGCCGGCGG 61.531 63.158 44.95 28.06 40.25 6.13
676 679 2.867091 CGGTAAGAATTCGCCGGCG 61.867 63.158 42.13 42.13 41.15 6.46
677 680 3.011583 CGGTAAGAATTCGCCGGC 58.988 61.111 19.07 19.07 41.15 6.13
678 681 3.011583 GCGGTAAGAATTCGCCGG 58.988 61.111 27.42 0.00 43.73 6.13
682 685 2.361438 ACCTAGAGGCGGTAAGAATTCG 59.639 50.000 0.00 0.00 39.32 3.34
683 686 3.550436 CGACCTAGAGGCGGTAAGAATTC 60.550 52.174 0.00 0.00 39.32 2.17
684 687 2.361438 CGACCTAGAGGCGGTAAGAATT 59.639 50.000 0.00 0.00 39.32 2.17
685 688 1.955080 CGACCTAGAGGCGGTAAGAAT 59.045 52.381 0.00 0.00 39.32 2.40
686 689 1.340405 ACGACCTAGAGGCGGTAAGAA 60.340 52.381 10.61 0.00 38.43 2.52
687 690 0.254178 ACGACCTAGAGGCGGTAAGA 59.746 55.000 10.61 0.00 38.43 2.10
688 691 0.381089 CACGACCTAGAGGCGGTAAG 59.619 60.000 10.61 0.00 38.43 2.34
689 692 0.035152 TCACGACCTAGAGGCGGTAA 60.035 55.000 10.61 0.00 38.43 2.85
690 693 0.745845 GTCACGACCTAGAGGCGGTA 60.746 60.000 10.61 0.00 38.43 4.02
691 694 2.045131 GTCACGACCTAGAGGCGGT 61.045 63.158 10.61 2.67 38.43 5.68
692 695 1.384989 ATGTCACGACCTAGAGGCGG 61.385 60.000 10.61 2.12 38.43 6.13
693 696 1.306148 TATGTCACGACCTAGAGGCG 58.694 55.000 5.08 5.08 39.32 5.52
694 697 2.034812 CCTTATGTCACGACCTAGAGGC 59.965 54.545 0.00 0.00 39.32 4.70
695 698 3.552875 TCCTTATGTCACGACCTAGAGG 58.447 50.000 0.00 0.00 42.17 3.69
696 699 4.202030 GGTTCCTTATGTCACGACCTAGAG 60.202 50.000 0.00 0.00 0.00 2.43
697 700 3.698040 GGTTCCTTATGTCACGACCTAGA 59.302 47.826 0.00 0.00 0.00 2.43
698 701 3.700038 AGGTTCCTTATGTCACGACCTAG 59.300 47.826 0.00 0.00 34.46 3.02
699 702 3.705051 AGGTTCCTTATGTCACGACCTA 58.295 45.455 0.00 0.00 34.46 3.08
700 703 2.537143 AGGTTCCTTATGTCACGACCT 58.463 47.619 0.00 0.00 0.00 3.85
701 704 3.194116 TGTAGGTTCCTTATGTCACGACC 59.806 47.826 0.00 0.00 0.00 4.79
702 705 4.445452 TGTAGGTTCCTTATGTCACGAC 57.555 45.455 0.00 0.00 0.00 4.34
703 706 5.471556 TTTGTAGGTTCCTTATGTCACGA 57.528 39.130 0.00 0.00 0.00 4.35
704 707 4.092968 GCTTTGTAGGTTCCTTATGTCACG 59.907 45.833 0.00 0.00 0.00 4.35
705 708 4.395231 GGCTTTGTAGGTTCCTTATGTCAC 59.605 45.833 0.00 0.00 0.00 3.67
706 709 4.042311 TGGCTTTGTAGGTTCCTTATGTCA 59.958 41.667 0.00 0.00 0.00 3.58
707 710 4.395231 GTGGCTTTGTAGGTTCCTTATGTC 59.605 45.833 0.00 0.00 0.00 3.06
708 711 4.042934 AGTGGCTTTGTAGGTTCCTTATGT 59.957 41.667 0.00 0.00 0.00 2.29
709 712 4.396166 CAGTGGCTTTGTAGGTTCCTTATG 59.604 45.833 0.00 0.00 0.00 1.90
733 736 4.314440 TCGTGTGGAGCCACCTGC 62.314 66.667 16.50 6.56 45.63 4.85
742 745 0.971386 GAAACTAGGGGTCGTGTGGA 59.029 55.000 0.00 0.00 0.00 4.02
768 771 3.494254 TTGGCTGGTGGACCCGTT 61.494 61.111 0.00 0.00 35.15 4.44
779 782 1.539388 TCGTTTATTGGCTGTTGGCTG 59.461 47.619 0.00 0.00 41.46 4.85
805 808 2.599281 TCGAGAGGGTTGCCGTGA 60.599 61.111 0.00 0.00 0.00 4.35
940 943 4.502259 CCTCTTCGATGGAACTTAGGATGG 60.502 50.000 0.00 0.00 0.00 3.51
993 997 3.075005 ACGTAGGCCATGGTCGCT 61.075 61.111 14.67 0.00 0.00 4.93
1148 1152 4.163078 ACCACAGGAATCATCTAGGTGAAG 59.837 45.833 10.35 0.91 0.00 3.02
1239 1243 5.528320 CCAAATGATTCCCATAAAATGCACC 59.472 40.000 0.00 0.00 34.45 5.01
1358 1363 0.309922 CCTTGCTCAGCACACAACTG 59.690 55.000 0.00 0.00 38.71 3.16
1468 1473 7.671302 CTAATGCATTAGTACCAGTCTATGGT 58.329 38.462 30.36 4.73 45.98 3.55
1536 1542 5.359194 AAGAACTCATCGATTATGTGGGT 57.641 39.130 0.00 0.00 36.89 4.51
1687 1694 9.665264 GGACATCTCTAACACAAACTTTAAAAG 57.335 33.333 0.00 0.00 0.00 2.27
1854 1861 9.537192 TTTCTAACGTCACTTATTTTCTTCAGA 57.463 29.630 0.00 0.00 0.00 3.27
1981 1988 3.585289 TCCTAGCAAAGTGTGGGTGATAA 59.415 43.478 0.00 0.00 0.00 1.75
2060 2068 7.057264 GTCCCTTAGGAAGATAAATTTGAGCT 58.943 38.462 0.00 0.00 46.38 4.09
2131 2139 2.208431 GATCATGGACCTTTCAGCTCG 58.792 52.381 0.00 0.00 0.00 5.03
2390 2459 1.238439 TGAAACTGCTAGCACCAAGC 58.762 50.000 14.93 3.16 46.19 4.01
2391 2460 4.232221 CAAATGAAACTGCTAGCACCAAG 58.768 43.478 14.93 6.74 0.00 3.61
2392 2461 3.636300 ACAAATGAAACTGCTAGCACCAA 59.364 39.130 14.93 0.00 0.00 3.67
2393 2462 3.221771 ACAAATGAAACTGCTAGCACCA 58.778 40.909 14.93 9.85 0.00 4.17
2394 2463 3.253188 TGACAAATGAAACTGCTAGCACC 59.747 43.478 14.93 4.08 0.00 5.01
2395 2464 4.023707 ACTGACAAATGAAACTGCTAGCAC 60.024 41.667 14.93 4.53 0.00 4.40
2396 2465 4.136796 ACTGACAAATGAAACTGCTAGCA 58.863 39.130 18.22 18.22 0.00 3.49
2397 2466 4.756084 ACTGACAAATGAAACTGCTAGC 57.244 40.909 8.10 8.10 0.00 3.42
2449 2518 8.143835 CCTTCAAAATGTCACCTCAAACTTTAT 58.856 33.333 0.00 0.00 0.00 1.40
2657 2727 5.695851 AAGATCAAAAGAAGTCGTGCAAT 57.304 34.783 0.00 0.00 0.00 3.56
2658 2728 5.179368 CCTAAGATCAAAAGAAGTCGTGCAA 59.821 40.000 0.00 0.00 0.00 4.08
2659 2729 4.690748 CCTAAGATCAAAAGAAGTCGTGCA 59.309 41.667 0.00 0.00 0.00 4.57
2660 2730 4.691216 ACCTAAGATCAAAAGAAGTCGTGC 59.309 41.667 0.00 0.00 0.00 5.34
2713 2802 7.332678 CACAAATGAGATTGATAGTCACAGTCA 59.667 37.037 0.00 0.00 34.38 3.41
2757 2846 2.356382 CGTTTGCCTTTCACAACACCTA 59.644 45.455 0.00 0.00 0.00 3.08
3344 3434 1.134995 CATGCTAGACTCTTCACGGCA 60.135 52.381 0.00 0.00 0.00 5.69
3406 3496 4.511454 GGCAAAGCGATGATGAATACAGTA 59.489 41.667 0.00 0.00 0.00 2.74
3477 3567 3.713858 TTCACATTGCACAACAGGAAG 57.286 42.857 0.00 0.00 0.00 3.46
3507 3597 9.369904 GGAATTACAAAGTAGACAAACGGTATA 57.630 33.333 0.00 0.00 0.00 1.47
3508 3598 7.063780 CGGAATTACAAAGTAGACAAACGGTAT 59.936 37.037 0.00 0.00 0.00 2.73
3509 3599 6.365789 CGGAATTACAAAGTAGACAAACGGTA 59.634 38.462 0.00 0.00 0.00 4.02
3513 3603 6.203338 TCCACGGAATTACAAAGTAGACAAAC 59.797 38.462 0.00 0.00 0.00 2.93
3623 3713 3.830755 TCAGTTGGAGGTTACAGGACTAC 59.169 47.826 0.00 0.00 0.00 2.73
3635 3725 2.951642 TGCTCTTGTTTTCAGTTGGAGG 59.048 45.455 0.00 0.00 0.00 4.30
3655 3745 1.334869 AGTTTTTCACAAGAGCGCCTG 59.665 47.619 2.29 1.21 0.00 4.85
3673 3763 3.330701 TGTAAATCAAAGGAGGCCTCAGT 59.669 43.478 33.29 17.82 30.89 3.41
3674 3764 3.944015 CTGTAAATCAAAGGAGGCCTCAG 59.056 47.826 33.29 19.30 30.89 3.35
3675 3765 3.308402 CCTGTAAATCAAAGGAGGCCTCA 60.308 47.826 33.29 13.84 32.43 3.86
3676 3766 3.282885 CCTGTAAATCAAAGGAGGCCTC 58.717 50.000 25.59 25.59 32.43 4.70
3677 3767 2.024941 CCCTGTAAATCAAAGGAGGCCT 60.025 50.000 3.86 3.86 32.43 5.19
3678 3768 2.291605 ACCCTGTAAATCAAAGGAGGCC 60.292 50.000 0.00 0.00 32.43 5.19
3679 3769 3.087370 ACCCTGTAAATCAAAGGAGGC 57.913 47.619 0.00 0.00 32.43 4.70
3680 3770 3.689649 CGAACCCTGTAAATCAAAGGAGG 59.310 47.826 0.00 0.00 32.43 4.30
3681 3771 3.127030 GCGAACCCTGTAAATCAAAGGAG 59.873 47.826 0.00 0.00 32.43 3.69
3682 3772 3.078837 GCGAACCCTGTAAATCAAAGGA 58.921 45.455 0.00 0.00 32.43 3.36
3683 3773 2.817258 TGCGAACCCTGTAAATCAAAGG 59.183 45.455 0.00 0.00 0.00 3.11
3684 3774 4.701956 ATGCGAACCCTGTAAATCAAAG 57.298 40.909 0.00 0.00 0.00 2.77
3685 3775 4.638421 CCTATGCGAACCCTGTAAATCAAA 59.362 41.667 0.00 0.00 0.00 2.69
3686 3776 4.080807 TCCTATGCGAACCCTGTAAATCAA 60.081 41.667 0.00 0.00 0.00 2.57
3687 3777 3.452990 TCCTATGCGAACCCTGTAAATCA 59.547 43.478 0.00 0.00 0.00 2.57
3688 3778 4.067972 TCCTATGCGAACCCTGTAAATC 57.932 45.455 0.00 0.00 0.00 2.17
3689 3779 4.497291 TTCCTATGCGAACCCTGTAAAT 57.503 40.909 0.00 0.00 0.00 1.40
3690 3780 3.985019 TTCCTATGCGAACCCTGTAAA 57.015 42.857 0.00 0.00 0.00 2.01
3691 3781 4.497291 AATTCCTATGCGAACCCTGTAA 57.503 40.909 0.00 0.00 0.00 2.41
3692 3782 4.497291 AAATTCCTATGCGAACCCTGTA 57.503 40.909 0.00 0.00 0.00 2.74
3693 3783 3.366052 AAATTCCTATGCGAACCCTGT 57.634 42.857 0.00 0.00 0.00 4.00
3694 3784 4.638421 TGTAAAATTCCTATGCGAACCCTG 59.362 41.667 0.00 0.00 0.00 4.45
3695 3785 4.850680 TGTAAAATTCCTATGCGAACCCT 58.149 39.130 0.00 0.00 0.00 4.34
3696 3786 4.036380 CCTGTAAAATTCCTATGCGAACCC 59.964 45.833 0.00 0.00 0.00 4.11
3697 3787 4.879545 TCCTGTAAAATTCCTATGCGAACC 59.120 41.667 0.00 0.00 0.00 3.62
3698 3788 6.619801 ATCCTGTAAAATTCCTATGCGAAC 57.380 37.500 0.00 0.00 0.00 3.95
3699 3789 6.826231 TCAATCCTGTAAAATTCCTATGCGAA 59.174 34.615 0.00 0.00 0.00 4.70
3700 3790 6.260050 GTCAATCCTGTAAAATTCCTATGCGA 59.740 38.462 0.00 0.00 0.00 5.10
3701 3791 6.038161 TGTCAATCCTGTAAAATTCCTATGCG 59.962 38.462 0.00 0.00 0.00 4.73
3702 3792 7.196331 GTGTCAATCCTGTAAAATTCCTATGC 58.804 38.462 0.00 0.00 0.00 3.14
3703 3793 7.201821 GGGTGTCAATCCTGTAAAATTCCTATG 60.202 40.741 0.00 0.00 0.00 2.23
3704 3794 6.833933 GGGTGTCAATCCTGTAAAATTCCTAT 59.166 38.462 0.00 0.00 0.00 2.57
3705 3795 6.011981 AGGGTGTCAATCCTGTAAAATTCCTA 60.012 38.462 0.00 0.00 31.11 2.94
3706 3796 5.016831 GGGTGTCAATCCTGTAAAATTCCT 58.983 41.667 0.00 0.00 0.00 3.36
3707 3797 5.016831 AGGGTGTCAATCCTGTAAAATTCC 58.983 41.667 0.00 0.00 31.11 3.01
3708 3798 5.946377 AGAGGGTGTCAATCCTGTAAAATTC 59.054 40.000 1.09 0.00 32.74 2.17
3709 3799 5.711976 CAGAGGGTGTCAATCCTGTAAAATT 59.288 40.000 1.09 0.00 32.74 1.82
3710 3800 5.014123 TCAGAGGGTGTCAATCCTGTAAAAT 59.986 40.000 1.09 0.00 32.74 1.82
3711 3801 4.349636 TCAGAGGGTGTCAATCCTGTAAAA 59.650 41.667 1.09 0.00 32.74 1.52
3712 3802 3.907474 TCAGAGGGTGTCAATCCTGTAAA 59.093 43.478 1.09 0.00 32.74 2.01
3713 3803 3.516586 TCAGAGGGTGTCAATCCTGTAA 58.483 45.455 1.09 0.00 32.74 2.41
3714 3804 3.184382 TCAGAGGGTGTCAATCCTGTA 57.816 47.619 1.09 0.00 32.74 2.74
3715 3805 2.030027 TCAGAGGGTGTCAATCCTGT 57.970 50.000 1.09 0.00 32.74 4.00
3716 3806 3.423539 TTTCAGAGGGTGTCAATCCTG 57.576 47.619 1.09 0.00 32.74 3.86
3717 3807 4.664688 AATTTCAGAGGGTGTCAATCCT 57.335 40.909 0.00 0.00 35.82 3.24
3718 3808 5.336770 GGAAAATTTCAGAGGGTGTCAATCC 60.337 44.000 8.09 0.00 0.00 3.01
3719 3809 5.336770 GGGAAAATTTCAGAGGGTGTCAATC 60.337 44.000 8.09 0.00 0.00 2.67
3720 3810 4.528206 GGGAAAATTTCAGAGGGTGTCAAT 59.472 41.667 8.09 0.00 0.00 2.57
3721 3811 3.895041 GGGAAAATTTCAGAGGGTGTCAA 59.105 43.478 8.09 0.00 0.00 3.18
3722 3812 3.140144 AGGGAAAATTTCAGAGGGTGTCA 59.860 43.478 8.09 0.00 0.00 3.58
3723 3813 3.767711 AGGGAAAATTTCAGAGGGTGTC 58.232 45.455 8.09 0.00 0.00 3.67
3724 3814 3.903530 AGGGAAAATTTCAGAGGGTGT 57.096 42.857 8.09 0.00 0.00 4.16
3725 3815 5.538433 TGTAAAGGGAAAATTTCAGAGGGTG 59.462 40.000 8.09 0.00 0.00 4.61
3726 3816 5.711698 TGTAAAGGGAAAATTTCAGAGGGT 58.288 37.500 8.09 0.00 0.00 4.34
3727 3817 6.211384 ACATGTAAAGGGAAAATTTCAGAGGG 59.789 38.462 8.09 0.00 0.00 4.30
3728 3818 7.232118 ACATGTAAAGGGAAAATTTCAGAGG 57.768 36.000 8.09 0.00 0.00 3.69
3729 3819 8.143835 ACAACATGTAAAGGGAAAATTTCAGAG 58.856 33.333 8.09 0.00 0.00 3.35
3730 3820 8.017418 ACAACATGTAAAGGGAAAATTTCAGA 57.983 30.769 8.09 0.00 0.00 3.27
3731 3821 8.661352 AACAACATGTAAAGGGAAAATTTCAG 57.339 30.769 8.09 0.00 0.00 3.02
3732 3822 8.887717 CAAACAACATGTAAAGGGAAAATTTCA 58.112 29.630 8.09 0.00 0.00 2.69
3733 3823 9.103861 TCAAACAACATGTAAAGGGAAAATTTC 57.896 29.630 0.00 0.00 0.00 2.17
3734 3824 9.625747 ATCAAACAACATGTAAAGGGAAAATTT 57.374 25.926 0.00 0.00 0.00 1.82
3735 3825 9.625747 AATCAAACAACATGTAAAGGGAAAATT 57.374 25.926 0.00 0.00 0.00 1.82
3736 3826 9.271828 GAATCAAACAACATGTAAAGGGAAAAT 57.728 29.630 0.00 0.00 0.00 1.82
3737 3827 7.436673 CGAATCAAACAACATGTAAAGGGAAAA 59.563 33.333 0.00 0.00 0.00 2.29
3738 3828 6.920758 CGAATCAAACAACATGTAAAGGGAAA 59.079 34.615 0.00 0.00 0.00 3.13
3739 3829 6.039941 ACGAATCAAACAACATGTAAAGGGAA 59.960 34.615 0.00 0.00 0.00 3.97
3740 3830 5.533154 ACGAATCAAACAACATGTAAAGGGA 59.467 36.000 0.00 0.00 0.00 4.20
3741 3831 5.768317 ACGAATCAAACAACATGTAAAGGG 58.232 37.500 0.00 0.00 0.00 3.95
3742 3832 7.021196 CCTACGAATCAAACAACATGTAAAGG 58.979 38.462 0.00 0.00 0.00 3.11
3743 3833 7.802738 TCCTACGAATCAAACAACATGTAAAG 58.197 34.615 0.00 0.00 0.00 1.85
3744 3834 7.731882 TCCTACGAATCAAACAACATGTAAA 57.268 32.000 0.00 0.00 0.00 2.01
3745 3835 7.915293 ATCCTACGAATCAAACAACATGTAA 57.085 32.000 0.00 0.00 0.00 2.41
3746 3836 7.625395 GCAATCCTACGAATCAAACAACATGTA 60.625 37.037 0.00 0.00 0.00 2.29
3747 3837 6.611381 CAATCCTACGAATCAAACAACATGT 58.389 36.000 0.00 0.00 0.00 3.21
3748 3838 5.512788 GCAATCCTACGAATCAAACAACATG 59.487 40.000 0.00 0.00 0.00 3.21
3749 3839 5.182950 TGCAATCCTACGAATCAAACAACAT 59.817 36.000 0.00 0.00 0.00 2.71
3750 3840 4.517075 TGCAATCCTACGAATCAAACAACA 59.483 37.500 0.00 0.00 0.00 3.33
3751 3841 5.041951 TGCAATCCTACGAATCAAACAAC 57.958 39.130 0.00 0.00 0.00 3.32
3752 3842 5.895636 ATGCAATCCTACGAATCAAACAA 57.104 34.783 0.00 0.00 0.00 2.83
3753 3843 5.163663 GGAATGCAATCCTACGAATCAAACA 60.164 40.000 13.89 0.00 36.50 2.83
3754 3844 5.273944 GGAATGCAATCCTACGAATCAAAC 58.726 41.667 13.89 0.00 36.50 2.93
3755 3845 5.499139 GGAATGCAATCCTACGAATCAAA 57.501 39.130 13.89 0.00 36.50 2.69
3766 3856 2.027385 GGTTCCTGAGGAATGCAATCC 58.973 52.381 18.18 13.29 44.04 3.01
3767 3857 2.726821 TGGTTCCTGAGGAATGCAATC 58.273 47.619 18.18 2.86 44.04 2.67
3768 3858 2.905415 TGGTTCCTGAGGAATGCAAT 57.095 45.000 18.18 0.00 44.04 3.56
3769 3859 2.673775 TTGGTTCCTGAGGAATGCAA 57.326 45.000 18.18 0.00 44.04 4.08
3770 3860 2.309755 AGATTGGTTCCTGAGGAATGCA 59.690 45.455 18.18 4.47 44.04 3.96
3771 3861 3.010200 AGATTGGTTCCTGAGGAATGC 57.990 47.619 18.18 5.20 44.04 3.56
3772 3862 6.939163 CCTATAAGATTGGTTCCTGAGGAATG 59.061 42.308 18.18 0.00 44.04 2.67
3773 3863 6.851836 TCCTATAAGATTGGTTCCTGAGGAAT 59.148 38.462 18.18 0.16 44.04 3.01
3774 3864 6.209774 TCCTATAAGATTGGTTCCTGAGGAA 58.790 40.000 10.46 10.46 39.66 3.36
3775 3865 5.788430 TCCTATAAGATTGGTTCCTGAGGA 58.212 41.667 0.00 0.00 0.00 3.71
3776 3866 6.100424 AGTTCCTATAAGATTGGTTCCTGAGG 59.900 42.308 0.00 0.00 0.00 3.86
3777 3867 7.130681 AGTTCCTATAAGATTGGTTCCTGAG 57.869 40.000 0.00 0.00 0.00 3.35
3778 3868 7.403231 AGAAGTTCCTATAAGATTGGTTCCTGA 59.597 37.037 0.00 0.00 0.00 3.86
3779 3869 7.569240 AGAAGTTCCTATAAGATTGGTTCCTG 58.431 38.462 0.00 0.00 0.00 3.86
3780 3870 7.757242 AGAAGTTCCTATAAGATTGGTTCCT 57.243 36.000 0.00 0.00 0.00 3.36
3781 3871 9.549078 CTAAGAAGTTCCTATAAGATTGGTTCC 57.451 37.037 0.00 0.00 0.00 3.62
3798 3888 7.067737 TTTCCCGTGAAAATGAACTAAGAAGTT 59.932 33.333 0.00 0.00 41.75 2.66
3799 3889 5.617252 TCCCGTGAAAATGAACTAAGAAGT 58.383 37.500 0.00 0.00 37.65 3.01
3800 3890 6.554334 TTCCCGTGAAAATGAACTAAGAAG 57.446 37.500 0.00 0.00 0.00 2.85
3801 3891 6.945938 TTTCCCGTGAAAATGAACTAAGAA 57.054 33.333 0.00 0.00 37.53 2.52
3802 3892 6.945938 TTTTCCCGTGAAAATGAACTAAGA 57.054 33.333 1.40 0.00 43.68 2.10
3812 3902 3.131223 TCATGCTTGTTTTCCCGTGAAAA 59.869 39.130 1.40 1.40 45.72 2.29
3813 3903 2.690497 TCATGCTTGTTTTCCCGTGAAA 59.310 40.909 0.00 0.00 38.69 2.69
3814 3904 2.293122 CTCATGCTTGTTTTCCCGTGAA 59.707 45.455 0.00 0.00 0.00 3.18
3815 3905 1.879380 CTCATGCTTGTTTTCCCGTGA 59.121 47.619 0.00 0.00 0.00 4.35
3816 3906 1.068333 CCTCATGCTTGTTTTCCCGTG 60.068 52.381 0.00 0.00 0.00 4.94
3817 3907 1.247567 CCTCATGCTTGTTTTCCCGT 58.752 50.000 0.00 0.00 0.00 5.28
3818 3908 1.247567 ACCTCATGCTTGTTTTCCCG 58.752 50.000 0.00 0.00 0.00 5.14
3819 3909 2.289010 CCAACCTCATGCTTGTTTTCCC 60.289 50.000 0.00 0.00 0.00 3.97
3820 3910 2.627699 TCCAACCTCATGCTTGTTTTCC 59.372 45.455 0.00 0.00 0.00 3.13
3821 3911 3.319122 AGTCCAACCTCATGCTTGTTTTC 59.681 43.478 0.00 0.00 0.00 2.29
3822 3912 3.299503 AGTCCAACCTCATGCTTGTTTT 58.700 40.909 0.00 0.00 0.00 2.43
3823 3913 2.949447 AGTCCAACCTCATGCTTGTTT 58.051 42.857 0.00 0.00 0.00 2.83
3824 3914 2.664402 AGTCCAACCTCATGCTTGTT 57.336 45.000 0.00 0.00 0.00 2.83
3825 3915 2.107204 AGAAGTCCAACCTCATGCTTGT 59.893 45.455 0.00 0.00 0.00 3.16
3826 3916 2.787994 AGAAGTCCAACCTCATGCTTG 58.212 47.619 0.00 0.00 0.00 4.01
3827 3917 3.152341 CAAGAAGTCCAACCTCATGCTT 58.848 45.455 0.00 0.00 0.00 3.91
3828 3918 2.553904 CCAAGAAGTCCAACCTCATGCT 60.554 50.000 0.00 0.00 0.00 3.79
3829 3919 1.815003 CCAAGAAGTCCAACCTCATGC 59.185 52.381 0.00 0.00 0.00 4.06
3830 3920 3.423539 TCCAAGAAGTCCAACCTCATG 57.576 47.619 0.00 0.00 0.00 3.07
3831 3921 4.453480 TTTCCAAGAAGTCCAACCTCAT 57.547 40.909 0.00 0.00 0.00 2.90
3832 3922 3.943671 TTTCCAAGAAGTCCAACCTCA 57.056 42.857 0.00 0.00 0.00 3.86
3851 3941 8.981659 CATTGGGTAGGAAAATAGAGGATTTTT 58.018 33.333 0.00 0.00 45.80 1.94
3853 3943 7.652554 ACATTGGGTAGGAAAATAGAGGATTT 58.347 34.615 0.00 0.00 39.56 2.17
3854 3944 7.226059 ACATTGGGTAGGAAAATAGAGGATT 57.774 36.000 0.00 0.00 0.00 3.01
3855 3945 6.848562 ACATTGGGTAGGAAAATAGAGGAT 57.151 37.500 0.00 0.00 0.00 3.24
3856 3946 7.374975 CTACATTGGGTAGGAAAATAGAGGA 57.625 40.000 0.00 0.00 44.77 3.71
3869 3959 4.785914 TCCACTGAAATCCTACATTGGGTA 59.214 41.667 0.00 0.00 37.41 3.69
3870 3960 3.591527 TCCACTGAAATCCTACATTGGGT 59.408 43.478 0.00 0.00 37.41 4.51
3871 3961 3.947834 GTCCACTGAAATCCTACATTGGG 59.052 47.826 0.00 0.00 37.41 4.12
3872 3962 4.588899 TGTCCACTGAAATCCTACATTGG 58.411 43.478 0.00 0.00 37.91 3.16
3873 3963 5.248640 ACTGTCCACTGAAATCCTACATTG 58.751 41.667 0.00 0.00 0.00 2.82
3874 3964 5.505181 ACTGTCCACTGAAATCCTACATT 57.495 39.130 0.00 0.00 0.00 2.71
3875 3965 5.483937 TGTACTGTCCACTGAAATCCTACAT 59.516 40.000 0.00 0.00 0.00 2.29
3876 3966 4.836175 TGTACTGTCCACTGAAATCCTACA 59.164 41.667 0.00 0.00 0.00 2.74
3877 3967 5.401531 TGTACTGTCCACTGAAATCCTAC 57.598 43.478 0.00 0.00 0.00 3.18
3878 3968 5.128827 GGATGTACTGTCCACTGAAATCCTA 59.871 44.000 11.53 0.00 35.76 2.94
3879 3969 4.080863 GGATGTACTGTCCACTGAAATCCT 60.081 45.833 11.53 0.00 35.76 3.24
3880 3970 4.080863 AGGATGTACTGTCCACTGAAATCC 60.081 45.833 16.76 6.52 38.25 3.01
3881 3971 5.091261 AGGATGTACTGTCCACTGAAATC 57.909 43.478 16.76 0.00 38.25 2.17
3882 3972 6.814954 ATAGGATGTACTGTCCACTGAAAT 57.185 37.500 16.76 1.49 38.25 2.17
3883 3973 6.440647 AGAATAGGATGTACTGTCCACTGAAA 59.559 38.462 16.76 0.65 38.25 2.69
3884 3974 5.958380 AGAATAGGATGTACTGTCCACTGAA 59.042 40.000 16.76 1.97 38.25 3.02
3885 3975 5.519808 AGAATAGGATGTACTGTCCACTGA 58.480 41.667 16.76 3.65 38.25 3.41
3886 3976 5.860941 AGAATAGGATGTACTGTCCACTG 57.139 43.478 16.76 0.00 38.25 3.66
3887 3977 5.721960 ACAAGAATAGGATGTACTGTCCACT 59.278 40.000 16.76 9.36 38.25 4.00
3888 3978 5.978814 ACAAGAATAGGATGTACTGTCCAC 58.021 41.667 16.76 7.82 38.25 4.02
3889 3979 6.183360 CGTACAAGAATAGGATGTACTGTCCA 60.183 42.308 16.76 6.57 44.47 4.02
3890 3980 6.183360 ACGTACAAGAATAGGATGTACTGTCC 60.183 42.308 11.97 9.15 44.47 4.02
3891 3981 6.793349 ACGTACAAGAATAGGATGTACTGTC 58.207 40.000 11.97 0.00 44.47 3.51
3892 3982 6.770746 ACGTACAAGAATAGGATGTACTGT 57.229 37.500 11.97 9.18 44.47 3.55
3893 3983 7.222224 GGAAACGTACAAGAATAGGATGTACTG 59.778 40.741 11.97 8.70 44.47 2.74
3894 3984 7.123847 AGGAAACGTACAAGAATAGGATGTACT 59.876 37.037 11.97 0.00 44.47 2.73
3895 3985 7.263496 AGGAAACGTACAAGAATAGGATGTAC 58.737 38.462 5.46 5.46 43.66 2.90
3896 3986 7.414222 AGGAAACGTACAAGAATAGGATGTA 57.586 36.000 0.00 0.00 0.00 2.29
3897 3987 6.295719 AGGAAACGTACAAGAATAGGATGT 57.704 37.500 0.00 0.00 0.00 3.06
3898 3988 6.700520 GGTAGGAAACGTACAAGAATAGGATG 59.299 42.308 0.00 0.00 0.00 3.51
3899 3989 6.610425 AGGTAGGAAACGTACAAGAATAGGAT 59.390 38.462 0.00 0.00 0.00 3.24
3900 3990 5.954150 AGGTAGGAAACGTACAAGAATAGGA 59.046 40.000 0.00 0.00 0.00 2.94
3901 3991 6.218108 AGGTAGGAAACGTACAAGAATAGG 57.782 41.667 0.00 0.00 0.00 2.57
3902 3992 9.460906 GAATAGGTAGGAAACGTACAAGAATAG 57.539 37.037 0.00 0.00 31.58 1.73
3903 3993 8.416329 GGAATAGGTAGGAAACGTACAAGAATA 58.584 37.037 0.00 0.00 31.58 1.75
3904 3994 7.125356 AGGAATAGGTAGGAAACGTACAAGAAT 59.875 37.037 0.00 0.00 31.58 2.40
3905 3995 6.438425 AGGAATAGGTAGGAAACGTACAAGAA 59.562 38.462 0.00 0.00 31.58 2.52
3906 3996 5.954150 AGGAATAGGTAGGAAACGTACAAGA 59.046 40.000 0.00 0.00 31.58 3.02
3907 3997 6.040878 CAGGAATAGGTAGGAAACGTACAAG 58.959 44.000 0.00 0.00 31.58 3.16
3908 3998 5.625197 GCAGGAATAGGTAGGAAACGTACAA 60.625 44.000 0.00 0.00 31.58 2.41
3909 3999 4.142093 GCAGGAATAGGTAGGAAACGTACA 60.142 45.833 0.00 0.00 31.58 2.90
3910 4000 4.366586 GCAGGAATAGGTAGGAAACGTAC 58.633 47.826 0.00 0.00 31.58 3.67
3911 4001 3.067180 CGCAGGAATAGGTAGGAAACGTA 59.933 47.826 0.00 0.00 33.24 3.57
3912 4002 2.159142 CGCAGGAATAGGTAGGAAACGT 60.159 50.000 0.00 0.00 0.00 3.99
3913 4003 2.470821 CGCAGGAATAGGTAGGAAACG 58.529 52.381 0.00 0.00 0.00 3.60
3914 4004 2.210961 GCGCAGGAATAGGTAGGAAAC 58.789 52.381 0.30 0.00 0.00 2.78
3915 4005 1.834896 TGCGCAGGAATAGGTAGGAAA 59.165 47.619 5.66 0.00 0.00 3.13
3916 4006 1.491668 TGCGCAGGAATAGGTAGGAA 58.508 50.000 5.66 0.00 0.00 3.36
3917 4007 1.138266 GTTGCGCAGGAATAGGTAGGA 59.862 52.381 11.31 0.00 41.93 2.94
3918 4008 1.583054 GTTGCGCAGGAATAGGTAGG 58.417 55.000 11.31 0.00 41.93 3.18
3919 4009 1.139058 AGGTTGCGCAGGAATAGGTAG 59.861 52.381 11.31 0.00 41.93 3.18
3920 4010 1.200519 AGGTTGCGCAGGAATAGGTA 58.799 50.000 11.31 0.00 41.93 3.08
3921 4011 0.328258 AAGGTTGCGCAGGAATAGGT 59.672 50.000 11.31 0.00 41.93 3.08
3922 4012 0.734889 CAAGGTTGCGCAGGAATAGG 59.265 55.000 11.31 0.00 41.93 2.57
3923 4013 1.131126 CACAAGGTTGCGCAGGAATAG 59.869 52.381 11.31 3.11 41.93 1.73
3924 4014 1.164411 CACAAGGTTGCGCAGGAATA 58.836 50.000 11.31 0.00 41.93 1.75
3925 4015 0.537143 TCACAAGGTTGCGCAGGAAT 60.537 50.000 11.31 0.00 41.93 3.01
3926 4016 0.749818 TTCACAAGGTTGCGCAGGAA 60.750 50.000 11.31 4.63 33.60 3.36
3927 4017 0.537143 ATTCACAAGGTTGCGCAGGA 60.537 50.000 11.31 0.00 0.00 3.86
3928 4018 0.109597 GATTCACAAGGTTGCGCAGG 60.110 55.000 11.31 1.69 0.00 4.85
3929 4019 0.592637 TGATTCACAAGGTTGCGCAG 59.407 50.000 11.31 0.00 0.00 5.18
3930 4020 1.028130 TTGATTCACAAGGTTGCGCA 58.972 45.000 5.66 5.66 34.20 6.09
3931 4021 3.863681 TTGATTCACAAGGTTGCGC 57.136 47.368 0.00 0.00 34.20 6.09
3939 4029 1.704628 TCAGGGCTCCTTGATTCACAA 59.295 47.619 0.00 0.00 36.97 3.33
3940 4030 1.361204 TCAGGGCTCCTTGATTCACA 58.639 50.000 0.00 0.00 0.00 3.58
3941 4031 2.496899 TTCAGGGCTCCTTGATTCAC 57.503 50.000 1.42 0.00 0.00 3.18
3942 4032 3.524095 TTTTCAGGGCTCCTTGATTCA 57.476 42.857 1.42 0.00 0.00 2.57
3943 4033 4.019174 TCATTTTCAGGGCTCCTTGATTC 58.981 43.478 1.42 0.00 0.00 2.52
3944 4034 4.051661 TCATTTTCAGGGCTCCTTGATT 57.948 40.909 1.42 0.00 0.00 2.57
3945 4035 3.744940 TCATTTTCAGGGCTCCTTGAT 57.255 42.857 1.42 0.00 0.00 2.57
3946 4036 3.524095 TTCATTTTCAGGGCTCCTTGA 57.476 42.857 0.00 0.00 0.00 3.02
3947 4037 3.306294 GGTTTCATTTTCAGGGCTCCTTG 60.306 47.826 0.00 0.00 0.00 3.61
3948 4038 2.899900 GGTTTCATTTTCAGGGCTCCTT 59.100 45.455 0.00 0.00 0.00 3.36
3949 4039 2.529632 GGTTTCATTTTCAGGGCTCCT 58.470 47.619 0.00 0.00 0.00 3.69
3950 4040 1.202348 CGGTTTCATTTTCAGGGCTCC 59.798 52.381 0.00 0.00 0.00 4.70
3951 4041 1.886542 ACGGTTTCATTTTCAGGGCTC 59.113 47.619 0.00 0.00 0.00 4.70
3952 4042 1.995376 ACGGTTTCATTTTCAGGGCT 58.005 45.000 0.00 0.00 0.00 5.19
3953 4043 2.296190 AGAACGGTTTCATTTTCAGGGC 59.704 45.455 0.00 0.00 33.72 5.19
3954 4044 4.156008 CCTAGAACGGTTTCATTTTCAGGG 59.844 45.833 0.00 0.00 33.72 4.45
3955 4045 5.001232 TCCTAGAACGGTTTCATTTTCAGG 58.999 41.667 0.00 0.00 33.72 3.86
4018 4133 7.562088 TGGGGTTAAACTTTCTCACTTGTAAAT 59.438 33.333 0.00 0.00 0.00 1.40
4027 4142 9.589461 TTATTGTTATGGGGTTAAACTTTCTCA 57.411 29.630 0.00 0.00 0.00 3.27
4044 4159 7.972832 TGTCGAAGTCCAAACTTATTGTTAT 57.027 32.000 0.00 0.00 45.80 1.89
4064 4179 1.236616 TGCCATGTGCTCCTTTGTCG 61.237 55.000 7.54 0.00 42.00 4.35
4068 4183 1.999648 TCTTTGCCATGTGCTCCTTT 58.000 45.000 7.54 0.00 42.00 3.11
4129 4244 2.216750 CTGAATGGCCTTGGTTGCGG 62.217 60.000 3.32 0.00 0.00 5.69
4141 4256 4.576053 TGACAAGGCGATTATTCTGAATGG 59.424 41.667 13.01 1.52 0.00 3.16
4146 4261 7.697691 AGTTTATTGACAAGGCGATTATTCTG 58.302 34.615 0.00 0.00 0.00 3.02
4200 4316 6.367695 CGACATACCATCACTGTTTACAAAGA 59.632 38.462 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.