Multiple sequence alignment - TraesCS4B01G208900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G208900 chr4B 100.000 5291 0 0 1 5291 446335948 446330658 0.000000e+00 9771
1 TraesCS4B01G208900 chr4B 96.226 106 4 0 2211 2316 446333276 446333171 1.960000e-39 174
2 TraesCS4B01G208900 chr4B 96.226 106 4 0 2673 2778 446333738 446333633 1.960000e-39 174
3 TraesCS4B01G208900 chr4D 95.146 2637 106 9 2672 5291 360954382 360957013 0.000000e+00 4141
4 TraesCS4B01G208900 chr4D 89.981 1587 80 34 1 1533 360952253 360953814 0.000000e+00 1977
5 TraesCS4B01G208900 chr4D 91.884 345 24 3 2318 2662 307245207 307245547 3.710000e-131 479
6 TraesCS4B01G208900 chr4D 87.823 271 29 4 2044 2313 360954217 360954484 1.110000e-81 315
7 TraesCS4B01G208900 chr4D 88.583 254 10 5 1779 2031 360953803 360954038 1.860000e-74 291
8 TraesCS4B01G208900 chr4A 93.978 2059 90 15 2673 4701 103725682 103723628 0.000000e+00 3085
9 TraesCS4B01G208900 chr4A 92.777 2132 78 26 221 2311 103727679 103725583 0.000000e+00 3014
10 TraesCS4B01G208900 chr4A 95.791 594 25 0 4698 5291 103723165 103722572 0.000000e+00 959
11 TraesCS4B01G208900 chr4A 85.950 242 22 8 1 231 103729887 103729647 1.140000e-61 248
12 TraesCS4B01G208900 chr6B 98.006 351 4 3 2318 2666 558517496 558517147 1.630000e-169 606
13 TraesCS4B01G208900 chr6B 91.477 352 24 4 2315 2664 692335980 692335633 3.710000e-131 479
14 TraesCS4B01G208900 chr2D 93.605 344 18 4 2318 2661 598718867 598718528 1.310000e-140 510
15 TraesCS4B01G208900 chr7B 92.754 345 24 1 2318 2662 330538500 330538843 1.020000e-136 497
16 TraesCS4B01G208900 chr2B 92.775 346 21 4 2318 2662 726552682 726552340 1.020000e-136 497
17 TraesCS4B01G208900 chr7D 91.643 347 25 3 2318 2664 582750720 582751062 1.330000e-130 477
18 TraesCS4B01G208900 chr7D 90.503 358 26 6 2303 2660 352331435 352331784 2.890000e-127 466
19 TraesCS4B01G208900 chr1B 91.884 345 22 4 2317 2660 249625663 249626002 1.330000e-130 477


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G208900 chr4B 446330658 446335948 5290 True 3373.0 9771 97.48400 1 5291 3 chr4B.!!$R1 5290
1 TraesCS4B01G208900 chr4D 360952253 360957013 4760 False 1681.0 4141 90.38325 1 5291 4 chr4D.!!$F2 5290
2 TraesCS4B01G208900 chr4A 103722572 103729887 7315 True 1826.5 3085 92.12400 1 5291 4 chr4A.!!$R1 5290

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
780 2789 0.239347 TCGAGACGAAGGAAACCGAC 59.761 55.0 0.0 0.0 31.06 4.79 F
2492 4723 0.035056 GTGAGGGAGGGATGTGGTTG 60.035 60.0 0.0 0.0 0.00 3.77 F
2541 4772 0.034670 ATTGGAGCAGAGAAGTGGGC 60.035 55.0 0.0 0.0 0.00 5.36 F
3155 5386 0.109723 TCCAACCGAGAAACAAGGGG 59.890 55.0 0.0 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2522 4753 0.034670 GCCCACTTCTCTGCTCCAAT 60.035 55.000 0.00 0.0 0.00 3.16 R
3786 6022 0.734889 AGCAATCGGAATGGCTTTCG 59.265 50.000 6.99 0.0 39.24 3.46 R
4074 6310 1.021390 GGTGAAGTGTGGATGGCTCG 61.021 60.000 0.00 0.0 0.00 5.03 R
4474 6719 1.341531 ACACATACTCGAGCATAGGGC 59.658 52.381 13.61 0.0 45.30 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.142881 CGTCGATTTCTTTTCTTTCCCCTC 60.143 45.833 0.00 0.00 0.00 4.30
31 32 2.951229 TTCTTTTCTTTCCCCTCGCT 57.049 45.000 0.00 0.00 0.00 4.93
73 74 3.091545 CTCCTCTTTCTGTCTCTCAGCT 58.908 50.000 0.00 0.00 43.32 4.24
148 149 3.744942 CCAGATAGATCACCTGCATTTCG 59.255 47.826 0.00 0.00 0.00 3.46
152 169 3.176552 AGATCACCTGCATTTCGAGAG 57.823 47.619 0.00 0.00 0.00 3.20
164 181 2.732412 TTCGAGAGAAGACCAGCAAG 57.268 50.000 0.00 0.00 46.92 4.01
165 182 0.891373 TCGAGAGAAGACCAGCAAGG 59.109 55.000 0.00 0.00 39.92 3.61
190 207 4.873129 CGAGCCACCGACCATCCG 62.873 72.222 0.00 0.00 0.00 4.18
195 212 1.918868 GCCACCGACCATCCGAAAAC 61.919 60.000 0.00 0.00 0.00 2.43
211 228 4.261572 CCGAAAACAACACTGTCCATCAAT 60.262 41.667 0.00 0.00 33.45 2.57
223 240 2.033372 TCCATCAATGCAATTCGCCAT 58.967 42.857 0.00 0.00 41.33 4.40
224 241 2.431419 TCCATCAATGCAATTCGCCATT 59.569 40.909 0.00 0.00 41.33 3.16
225 242 2.798283 CCATCAATGCAATTCGCCATTC 59.202 45.455 0.00 0.00 41.33 2.67
226 243 3.449632 CATCAATGCAATTCGCCATTCA 58.550 40.909 0.00 0.00 41.33 2.57
228 245 4.126208 TCAATGCAATTCGCCATTCATT 57.874 36.364 0.00 0.00 41.33 2.57
231 248 6.979465 TCAATGCAATTCGCCATTCATTATA 58.021 32.000 0.00 0.00 41.33 0.98
232 249 6.862608 TCAATGCAATTCGCCATTCATTATAC 59.137 34.615 0.00 0.00 41.33 1.47
236 2235 5.156355 CAATTCGCCATTCATTATACAGGC 58.844 41.667 0.00 0.00 38.73 4.85
239 2238 1.812571 GCCATTCATTATACAGGCGGG 59.187 52.381 0.00 0.00 31.88 6.13
245 2244 0.470766 ATTATACAGGCGGGGCGAAA 59.529 50.000 0.00 0.00 0.00 3.46
299 2304 1.112315 CGATGGTGAGGAGGGAGAGG 61.112 65.000 0.00 0.00 0.00 3.69
350 2355 3.387091 ACGGTGGCGGTGATGCTA 61.387 61.111 0.00 0.00 34.52 3.49
359 2364 0.660595 CGGTGATGCTATCGTCGTCC 60.661 60.000 0.00 0.00 0.00 4.79
780 2789 0.239347 TCGAGACGAAGGAAACCGAC 59.761 55.000 0.00 0.00 31.06 4.79
864 2879 1.388431 GCACTCGAAGAAGAGAAAGCG 59.612 52.381 0.62 0.00 40.57 4.68
901 2916 4.778415 CACCGCACTCGAGACCCG 62.778 72.222 21.68 16.91 38.10 5.28
909 2924 3.062466 TCGAGACCCGAGCACAGG 61.062 66.667 0.00 0.00 43.23 4.00
1129 3147 4.201763 GGCTTATCTCTTCTGCTGTTTTCG 60.202 45.833 0.00 0.00 0.00 3.46
1159 3177 2.674380 CTGAGGCAAGGGTGTGGC 60.674 66.667 0.00 0.00 44.15 5.01
1184 3205 1.838396 TGTGCAGTGAGGAGGAGCA 60.838 57.895 0.00 0.00 0.00 4.26
1414 3461 3.572632 AAGGATGATGGATGTGTGGAG 57.427 47.619 0.00 0.00 0.00 3.86
1422 3469 2.050918 TGGATGTGTGGAGTTGTGGTA 58.949 47.619 0.00 0.00 0.00 3.25
1446 3493 1.416030 ACAATTTGCCCACCCTTGAAC 59.584 47.619 0.00 0.00 0.00 3.18
1534 3581 8.554528 CAGCATTCTGAATATTCTGTAATTCGT 58.445 33.333 16.24 3.56 42.95 3.85
1570 3617 1.816074 TTCGTAATCCACACTTGCCC 58.184 50.000 0.00 0.00 0.00 5.36
1686 3733 4.757149 CCGCCCTTAGAAAGATTGGAATAG 59.243 45.833 0.00 0.00 0.00 1.73
1688 3735 5.073428 GCCCTTAGAAAGATTGGAATAGGG 58.927 45.833 0.00 0.00 42.17 3.53
1691 3738 6.547510 CCCTTAGAAAGATTGGAATAGGGTTG 59.452 42.308 0.00 0.00 36.01 3.77
1964 4014 3.472652 ACTTGTGACCGTTGCAGATTTA 58.527 40.909 0.00 0.00 0.00 1.40
2031 4081 9.673454 CAAATGGTATGTCTGATCATTGTTATG 57.327 33.333 0.00 0.00 0.00 1.90
2036 4086 9.507280 GGTATGTCTGATCATTGTTATGTTTTG 57.493 33.333 0.00 0.00 33.34 2.44
2095 4318 0.324275 GGGTTGGCTTAGCATGGGAA 60.324 55.000 6.53 0.00 0.00 3.97
2096 4319 1.555967 GGTTGGCTTAGCATGGGAAA 58.444 50.000 6.53 0.00 0.00 3.13
2119 4342 8.786826 AAACATAAGTCATATCCTTTTGACGA 57.213 30.769 0.00 0.00 45.42 4.20
2131 4354 2.472695 TTTGACGACCTCTTGGGATG 57.527 50.000 0.00 0.00 38.76 3.51
2160 4383 0.248417 CCACGCAGAGATCTCAGTCG 60.248 60.000 24.39 22.54 0.00 4.18
2311 4542 8.935844 CACTAAAGTTCTGCAGATGTATTGTTA 58.064 33.333 19.04 8.42 0.00 2.41
2312 4543 9.672673 ACTAAAGTTCTGCAGATGTATTGTTAT 57.327 29.630 19.04 0.00 0.00 1.89
2314 4545 8.565896 AAAGTTCTGCAGATGTATTGTTATCA 57.434 30.769 19.04 0.00 0.00 2.15
2315 4546 8.743085 AAGTTCTGCAGATGTATTGTTATCAT 57.257 30.769 19.04 0.00 0.00 2.45
2316 4547 9.836864 AAGTTCTGCAGATGTATTGTTATCATA 57.163 29.630 19.04 0.00 0.00 2.15
2317 4548 9.836864 AGTTCTGCAGATGTATTGTTATCATAA 57.163 29.630 19.04 0.00 0.00 1.90
2318 4549 9.869844 GTTCTGCAGATGTATTGTTATCATAAC 57.130 33.333 19.04 2.21 0.00 1.89
2319 4550 9.836864 TTCTGCAGATGTATTGTTATCATAACT 57.163 29.630 19.04 0.00 0.00 2.24
2322 4553 9.208022 TGCAGATGTATTGTTATCATAACTAGC 57.792 33.333 9.01 0.71 0.00 3.42
2323 4554 9.208022 GCAGATGTATTGTTATCATAACTAGCA 57.792 33.333 9.01 5.55 0.00 3.49
2329 4560 9.599322 GTATTGTTATCATAACTAGCAATGTGC 57.401 33.333 9.01 0.00 45.46 4.57
2330 4561 6.618287 TGTTATCATAACTAGCAATGTGCC 57.382 37.500 9.01 0.00 46.52 5.01
2331 4562 5.530915 TGTTATCATAACTAGCAATGTGCCC 59.469 40.000 9.01 0.00 46.52 5.36
2332 4563 3.643199 TCATAACTAGCAATGTGCCCA 57.357 42.857 0.00 0.00 46.52 5.36
2333 4564 4.169059 TCATAACTAGCAATGTGCCCAT 57.831 40.909 0.00 0.00 46.52 4.00
2334 4565 3.884693 TCATAACTAGCAATGTGCCCATG 59.115 43.478 0.00 0.00 46.52 3.66
2335 4566 0.819582 AACTAGCAATGTGCCCATGC 59.180 50.000 0.00 0.00 46.52 4.06
2336 4567 1.357690 CTAGCAATGTGCCCATGCG 59.642 57.895 0.00 0.00 46.52 4.73
2337 4568 1.378382 TAGCAATGTGCCCATGCGT 60.378 52.632 0.00 0.00 46.52 5.24
2338 4569 0.964860 TAGCAATGTGCCCATGCGTT 60.965 50.000 0.00 0.00 46.52 4.84
2339 4570 2.095847 GCAATGTGCCCATGCGTTG 61.096 57.895 0.00 0.00 41.78 4.10
2340 4571 2.095847 CAATGTGCCCATGCGTTGC 61.096 57.895 0.00 0.00 41.78 4.17
2341 4572 2.572149 AATGTGCCCATGCGTTGCA 61.572 52.632 0.00 0.00 44.86 4.08
2342 4573 2.097201 AATGTGCCCATGCGTTGCAA 62.097 50.000 0.00 0.00 43.62 4.08
2343 4574 2.734346 GTGCCCATGCGTTGCAAC 60.734 61.111 19.89 19.89 43.62 4.17
2356 4587 3.471495 GTTGCAACGGATCCAAAGTAG 57.529 47.619 14.90 0.00 0.00 2.57
2357 4588 3.071479 GTTGCAACGGATCCAAAGTAGA 58.929 45.455 14.90 0.00 0.00 2.59
2358 4589 3.410631 TGCAACGGATCCAAAGTAGAA 57.589 42.857 13.41 0.00 0.00 2.10
2359 4590 3.950397 TGCAACGGATCCAAAGTAGAAT 58.050 40.909 13.41 0.00 0.00 2.40
2360 4591 5.092554 TGCAACGGATCCAAAGTAGAATA 57.907 39.130 13.41 0.00 0.00 1.75
2361 4592 5.492895 TGCAACGGATCCAAAGTAGAATAA 58.507 37.500 13.41 0.00 0.00 1.40
2362 4593 6.119536 TGCAACGGATCCAAAGTAGAATAAT 58.880 36.000 13.41 0.00 0.00 1.28
2363 4594 7.276658 TGCAACGGATCCAAAGTAGAATAATA 58.723 34.615 13.41 0.00 0.00 0.98
2364 4595 7.225931 TGCAACGGATCCAAAGTAGAATAATAC 59.774 37.037 13.41 0.00 0.00 1.89
2365 4596 7.441458 GCAACGGATCCAAAGTAGAATAATACT 59.559 37.037 13.41 0.00 37.61 2.12
2366 4597 9.326413 CAACGGATCCAAAGTAGAATAATACTT 57.674 33.333 13.41 0.00 45.67 2.24
2393 4624 9.657419 ATTCACAAATTTGAAAGAAAACACTCT 57.343 25.926 24.64 6.20 38.95 3.24
2394 4625 9.487790 TTCACAAATTTGAAAGAAAACACTCTT 57.512 25.926 24.64 0.00 37.24 2.85
2460 4691 9.874215 GTTTCACTAAAAATATATTACTCGGGC 57.126 33.333 0.00 0.00 0.00 6.13
2461 4692 9.841295 TTTCACTAAAAATATATTACTCGGGCT 57.159 29.630 0.00 0.00 0.00 5.19
2462 4693 8.827177 TCACTAAAAATATATTACTCGGGCTG 57.173 34.615 0.00 0.00 0.00 4.85
2463 4694 8.426489 TCACTAAAAATATATTACTCGGGCTGT 58.574 33.333 0.00 0.00 0.00 4.40
2464 4695 9.052759 CACTAAAAATATATTACTCGGGCTGTT 57.947 33.333 0.00 0.00 0.00 3.16
2465 4696 9.623000 ACTAAAAATATATTACTCGGGCTGTTT 57.377 29.630 0.00 0.00 0.00 2.83
2468 4699 8.514330 AAAATATATTACTCGGGCTGTTTTGA 57.486 30.769 0.00 0.00 0.00 2.69
2469 4700 8.691661 AAATATATTACTCGGGCTGTTTTGAT 57.308 30.769 0.00 0.00 0.00 2.57
2470 4701 7.672983 ATATATTACTCGGGCTGTTTTGATG 57.327 36.000 0.00 0.00 0.00 3.07
2471 4702 3.410631 TTACTCGGGCTGTTTTGATGA 57.589 42.857 0.00 0.00 0.00 2.92
2472 4703 1.813513 ACTCGGGCTGTTTTGATGAG 58.186 50.000 0.00 0.00 0.00 2.90
2473 4704 1.089920 CTCGGGCTGTTTTGATGAGG 58.910 55.000 0.00 0.00 0.00 3.86
2474 4705 0.400213 TCGGGCTGTTTTGATGAGGT 59.600 50.000 0.00 0.00 0.00 3.85
2475 4706 0.523072 CGGGCTGTTTTGATGAGGTG 59.477 55.000 0.00 0.00 0.00 4.00
2476 4707 1.881925 CGGGCTGTTTTGATGAGGTGA 60.882 52.381 0.00 0.00 0.00 4.02
2477 4708 1.815003 GGGCTGTTTTGATGAGGTGAG 59.185 52.381 0.00 0.00 0.00 3.51
2478 4709 1.815003 GGCTGTTTTGATGAGGTGAGG 59.185 52.381 0.00 0.00 0.00 3.86
2479 4710 1.815003 GCTGTTTTGATGAGGTGAGGG 59.185 52.381 0.00 0.00 0.00 4.30
2480 4711 2.553028 GCTGTTTTGATGAGGTGAGGGA 60.553 50.000 0.00 0.00 0.00 4.20
2481 4712 3.341823 CTGTTTTGATGAGGTGAGGGAG 58.658 50.000 0.00 0.00 0.00 4.30
2482 4713 2.040278 TGTTTTGATGAGGTGAGGGAGG 59.960 50.000 0.00 0.00 0.00 4.30
2483 4714 1.289160 TTTGATGAGGTGAGGGAGGG 58.711 55.000 0.00 0.00 0.00 4.30
2484 4715 0.417437 TTGATGAGGTGAGGGAGGGA 59.583 55.000 0.00 0.00 0.00 4.20
2485 4716 0.644380 TGATGAGGTGAGGGAGGGAT 59.356 55.000 0.00 0.00 0.00 3.85
2486 4717 1.055040 GATGAGGTGAGGGAGGGATG 58.945 60.000 0.00 0.00 0.00 3.51
2487 4718 0.344790 ATGAGGTGAGGGAGGGATGT 59.655 55.000 0.00 0.00 0.00 3.06
2488 4719 0.618680 TGAGGTGAGGGAGGGATGTG 60.619 60.000 0.00 0.00 0.00 3.21
2489 4720 1.307343 AGGTGAGGGAGGGATGTGG 60.307 63.158 0.00 0.00 0.00 4.17
2490 4721 1.616628 GGTGAGGGAGGGATGTGGT 60.617 63.158 0.00 0.00 0.00 4.16
2491 4722 1.208165 GGTGAGGGAGGGATGTGGTT 61.208 60.000 0.00 0.00 0.00 3.67
2492 4723 0.035056 GTGAGGGAGGGATGTGGTTG 60.035 60.000 0.00 0.00 0.00 3.77
2493 4724 1.207488 TGAGGGAGGGATGTGGTTGG 61.207 60.000 0.00 0.00 0.00 3.77
2494 4725 1.151587 AGGGAGGGATGTGGTTGGT 60.152 57.895 0.00 0.00 0.00 3.67
2495 4726 0.776080 AGGGAGGGATGTGGTTGGTT 60.776 55.000 0.00 0.00 0.00 3.67
2496 4727 0.323451 GGGAGGGATGTGGTTGGTTC 60.323 60.000 0.00 0.00 0.00 3.62
2497 4728 0.323451 GGAGGGATGTGGTTGGTTCC 60.323 60.000 0.00 0.00 0.00 3.62
2498 4729 0.404040 GAGGGATGTGGTTGGTTCCA 59.596 55.000 0.00 0.00 34.85 3.53
2499 4730 0.856982 AGGGATGTGGTTGGTTCCAA 59.143 50.000 0.00 0.00 39.34 3.53
2500 4731 1.203050 AGGGATGTGGTTGGTTCCAAG 60.203 52.381 4.37 0.00 39.34 3.61
2501 4732 1.203001 GGGATGTGGTTGGTTCCAAGA 60.203 52.381 4.37 0.00 39.34 3.02
2502 4733 2.557452 GGGATGTGGTTGGTTCCAAGAT 60.557 50.000 4.37 0.00 39.34 2.40
2503 4734 3.308832 GGGATGTGGTTGGTTCCAAGATA 60.309 47.826 4.37 0.00 39.34 1.98
2504 4735 3.694566 GGATGTGGTTGGTTCCAAGATAC 59.305 47.826 4.37 5.44 39.34 2.24
2505 4736 4.567747 GGATGTGGTTGGTTCCAAGATACT 60.568 45.833 4.37 0.00 39.34 2.12
2506 4737 5.338871 GGATGTGGTTGGTTCCAAGATACTA 60.339 44.000 4.37 0.00 39.34 1.82
2507 4738 5.570205 TGTGGTTGGTTCCAAGATACTAA 57.430 39.130 4.37 0.00 39.34 2.24
2508 4739 5.556915 TGTGGTTGGTTCCAAGATACTAAG 58.443 41.667 4.37 0.00 39.34 2.18
2509 4740 4.941873 GTGGTTGGTTCCAAGATACTAAGG 59.058 45.833 4.37 0.00 39.34 2.69
2510 4741 4.018779 TGGTTGGTTCCAAGATACTAAGGG 60.019 45.833 4.37 0.00 34.24 3.95
2511 4742 4.524053 GTTGGTTCCAAGATACTAAGGGG 58.476 47.826 4.37 0.00 0.00 4.79
2512 4743 3.810623 TGGTTCCAAGATACTAAGGGGT 58.189 45.455 0.00 0.00 0.00 4.95
2513 4744 4.180723 TGGTTCCAAGATACTAAGGGGTT 58.819 43.478 0.00 0.00 0.00 4.11
2514 4745 4.604490 TGGTTCCAAGATACTAAGGGGTTT 59.396 41.667 0.00 0.00 0.00 3.27
2515 4746 5.075344 TGGTTCCAAGATACTAAGGGGTTTT 59.925 40.000 0.00 0.00 0.00 2.43
2516 4747 6.014647 GGTTCCAAGATACTAAGGGGTTTTT 58.985 40.000 0.00 0.00 0.00 1.94
2534 4765 4.669206 TTTTTGCAAATTGGAGCAGAGA 57.331 36.364 13.65 0.00 42.39 3.10
2535 4766 4.669206 TTTTGCAAATTGGAGCAGAGAA 57.331 36.364 13.65 0.00 42.39 2.87
2536 4767 3.928727 TTGCAAATTGGAGCAGAGAAG 57.071 42.857 0.00 0.00 42.39 2.85
2537 4768 2.867624 TGCAAATTGGAGCAGAGAAGT 58.132 42.857 0.00 0.00 35.51 3.01
2538 4769 2.555325 TGCAAATTGGAGCAGAGAAGTG 59.445 45.455 0.00 0.00 35.51 3.16
2539 4770 2.094854 GCAAATTGGAGCAGAGAAGTGG 60.095 50.000 0.00 0.00 0.00 4.00
2540 4771 2.490903 CAAATTGGAGCAGAGAAGTGGG 59.509 50.000 0.00 0.00 0.00 4.61
2541 4772 0.034670 ATTGGAGCAGAGAAGTGGGC 60.035 55.000 0.00 0.00 0.00 5.36
2542 4773 1.130054 TTGGAGCAGAGAAGTGGGCT 61.130 55.000 0.00 0.00 39.75 5.19
2543 4774 0.252239 TGGAGCAGAGAAGTGGGCTA 60.252 55.000 0.00 0.00 36.59 3.93
2544 4775 1.127343 GGAGCAGAGAAGTGGGCTAT 58.873 55.000 0.00 0.00 36.59 2.97
2545 4776 1.488393 GGAGCAGAGAAGTGGGCTATT 59.512 52.381 0.00 0.00 36.59 1.73
2546 4777 2.559440 GAGCAGAGAAGTGGGCTATTG 58.441 52.381 0.00 0.00 36.59 1.90
2547 4778 1.912043 AGCAGAGAAGTGGGCTATTGT 59.088 47.619 0.00 0.00 34.25 2.71
2548 4779 2.307098 AGCAGAGAAGTGGGCTATTGTT 59.693 45.455 0.00 0.00 34.25 2.83
2549 4780 2.421424 GCAGAGAAGTGGGCTATTGTTG 59.579 50.000 0.00 0.00 0.00 3.33
2550 4781 2.421424 CAGAGAAGTGGGCTATTGTTGC 59.579 50.000 0.00 0.00 0.00 4.17
2551 4782 2.040278 AGAGAAGTGGGCTATTGTTGCA 59.960 45.455 0.00 0.00 0.00 4.08
2552 4783 2.819608 GAGAAGTGGGCTATTGTTGCAA 59.180 45.455 0.00 0.00 0.00 4.08
2553 4784 3.230134 AGAAGTGGGCTATTGTTGCAAA 58.770 40.909 0.00 0.00 0.00 3.68
2554 4785 3.640967 AGAAGTGGGCTATTGTTGCAAAA 59.359 39.130 0.00 0.00 0.00 2.44
2555 4786 4.100808 AGAAGTGGGCTATTGTTGCAAAAA 59.899 37.500 4.10 4.10 0.00 1.94
2556 4787 3.993920 AGTGGGCTATTGTTGCAAAAAG 58.006 40.909 8.28 0.00 0.00 2.27
2557 4788 3.066380 GTGGGCTATTGTTGCAAAAAGG 58.934 45.455 8.28 4.67 0.00 3.11
2558 4789 2.076100 GGGCTATTGTTGCAAAAAGGC 58.924 47.619 16.94 16.94 0.00 4.35
2559 4790 2.076100 GGCTATTGTTGCAAAAAGGCC 58.924 47.619 24.13 24.13 0.00 5.19
2560 4791 2.549778 GGCTATTGTTGCAAAAAGGCCA 60.550 45.455 29.19 11.41 37.30 5.36
2561 4792 2.480037 GCTATTGTTGCAAAAAGGCCAC 59.520 45.455 5.01 0.00 0.00 5.01
2562 4793 2.706339 ATTGTTGCAAAAAGGCCACA 57.294 40.000 5.01 0.00 37.62 4.17
2563 4794 2.479566 TTGTTGCAAAAAGGCCACAA 57.520 40.000 5.01 0.35 44.21 3.33
2564 4795 1.731720 TGTTGCAAAAAGGCCACAAC 58.268 45.000 5.01 9.90 36.61 3.32
2565 4796 1.277557 TGTTGCAAAAAGGCCACAACT 59.722 42.857 5.01 0.00 40.88 3.16
2566 4797 2.289945 TGTTGCAAAAAGGCCACAACTT 60.290 40.909 5.01 0.00 40.88 2.66
2567 4798 3.055819 TGTTGCAAAAAGGCCACAACTTA 60.056 39.130 5.01 0.00 40.88 2.24
2568 4799 3.172229 TGCAAAAAGGCCACAACTTAC 57.828 42.857 5.01 0.00 0.00 2.34
2569 4800 2.159028 TGCAAAAAGGCCACAACTTACC 60.159 45.455 5.01 0.00 0.00 2.85
2570 4801 2.102420 GCAAAAAGGCCACAACTTACCT 59.898 45.455 5.01 0.00 0.00 3.08
2571 4802 3.798889 GCAAAAAGGCCACAACTTACCTC 60.799 47.826 5.01 0.00 0.00 3.85
2572 4803 3.306472 AAAAGGCCACAACTTACCTCA 57.694 42.857 5.01 0.00 0.00 3.86
2573 4804 2.271944 AAGGCCACAACTTACCTCAC 57.728 50.000 5.01 0.00 0.00 3.51
2574 4805 1.136828 AGGCCACAACTTACCTCACA 58.863 50.000 5.01 0.00 0.00 3.58
2575 4806 1.072331 AGGCCACAACTTACCTCACAG 59.928 52.381 5.01 0.00 0.00 3.66
2576 4807 1.202770 GGCCACAACTTACCTCACAGT 60.203 52.381 0.00 0.00 0.00 3.55
2577 4808 2.143925 GCCACAACTTACCTCACAGTC 58.856 52.381 0.00 0.00 0.00 3.51
2578 4809 2.404215 CCACAACTTACCTCACAGTCG 58.596 52.381 0.00 0.00 0.00 4.18
2579 4810 2.223971 CCACAACTTACCTCACAGTCGT 60.224 50.000 0.00 0.00 0.00 4.34
2580 4811 3.454375 CACAACTTACCTCACAGTCGTT 58.546 45.455 0.00 0.00 0.00 3.85
2581 4812 4.500205 CCACAACTTACCTCACAGTCGTTA 60.500 45.833 0.00 0.00 0.00 3.18
2582 4813 4.680110 CACAACTTACCTCACAGTCGTTAG 59.320 45.833 0.00 0.00 0.00 2.34
2583 4814 4.581824 ACAACTTACCTCACAGTCGTTAGA 59.418 41.667 0.00 0.00 0.00 2.10
2584 4815 5.243283 ACAACTTACCTCACAGTCGTTAGAT 59.757 40.000 0.00 0.00 0.00 1.98
2585 4816 5.312120 ACTTACCTCACAGTCGTTAGATG 57.688 43.478 0.00 0.00 0.00 2.90
2586 4817 2.656560 ACCTCACAGTCGTTAGATGC 57.343 50.000 0.00 0.00 0.00 3.91
2587 4818 1.893137 ACCTCACAGTCGTTAGATGCA 59.107 47.619 0.00 0.00 0.00 3.96
2588 4819 2.094494 ACCTCACAGTCGTTAGATGCAG 60.094 50.000 0.00 0.00 0.00 4.41
2589 4820 2.164422 CCTCACAGTCGTTAGATGCAGA 59.836 50.000 0.00 0.00 0.00 4.26
2590 4821 3.181482 CCTCACAGTCGTTAGATGCAGAT 60.181 47.826 0.00 0.00 0.00 2.90
2591 4822 4.033990 TCACAGTCGTTAGATGCAGATC 57.966 45.455 0.00 0.00 0.00 2.75
2592 4823 3.696548 TCACAGTCGTTAGATGCAGATCT 59.303 43.478 0.00 0.00 42.03 2.75
2593 4824 4.881850 TCACAGTCGTTAGATGCAGATCTA 59.118 41.667 0.00 0.00 39.76 1.98
2594 4825 5.357032 TCACAGTCGTTAGATGCAGATCTAA 59.643 40.000 5.80 5.80 45.23 2.10
2604 4835 8.806429 TTAGATGCAGATCTAATGGTCAAAAA 57.194 30.769 5.80 0.00 43.42 1.94
2605 4836 7.893124 AGATGCAGATCTAATGGTCAAAAAT 57.107 32.000 0.00 0.00 37.15 1.82
2606 4837 7.713750 AGATGCAGATCTAATGGTCAAAAATG 58.286 34.615 0.00 0.00 37.15 2.32
2607 4838 7.558807 AGATGCAGATCTAATGGTCAAAAATGA 59.441 33.333 0.00 0.00 37.15 2.57
2608 4839 7.649533 TGCAGATCTAATGGTCAAAAATGAT 57.350 32.000 0.00 0.00 0.00 2.45
2609 4840 7.485810 TGCAGATCTAATGGTCAAAAATGATG 58.514 34.615 0.00 0.00 0.00 3.07
2610 4841 6.921857 GCAGATCTAATGGTCAAAAATGATGG 59.078 38.462 0.00 0.00 0.00 3.51
2611 4842 6.921857 CAGATCTAATGGTCAAAAATGATGGC 59.078 38.462 0.00 0.00 0.00 4.40
2612 4843 6.837568 AGATCTAATGGTCAAAAATGATGGCT 59.162 34.615 0.00 0.00 0.00 4.75
2613 4844 8.000709 AGATCTAATGGTCAAAAATGATGGCTA 58.999 33.333 0.00 0.00 0.00 3.93
2614 4845 7.572523 TCTAATGGTCAAAAATGATGGCTAG 57.427 36.000 0.00 0.00 0.00 3.42
2615 4846 5.603170 AATGGTCAAAAATGATGGCTAGG 57.397 39.130 0.00 0.00 0.00 3.02
2616 4847 3.364549 TGGTCAAAAATGATGGCTAGGG 58.635 45.455 0.00 0.00 0.00 3.53
2617 4848 2.695147 GGTCAAAAATGATGGCTAGGGG 59.305 50.000 0.00 0.00 0.00 4.79
2618 4849 3.627237 GGTCAAAAATGATGGCTAGGGGA 60.627 47.826 0.00 0.00 0.00 4.81
2619 4850 3.381590 GTCAAAAATGATGGCTAGGGGAC 59.618 47.826 0.00 0.00 0.00 4.46
2620 4851 3.011144 TCAAAAATGATGGCTAGGGGACA 59.989 43.478 0.00 0.00 37.36 4.02
2621 4852 2.736670 AAATGATGGCTAGGGGACAC 57.263 50.000 0.00 0.00 34.73 3.67
2622 4853 1.595311 AATGATGGCTAGGGGACACA 58.405 50.000 0.00 0.00 34.73 3.72
2623 4854 0.839946 ATGATGGCTAGGGGACACAC 59.160 55.000 0.00 0.00 34.73 3.82
2624 4855 1.271840 TGATGGCTAGGGGACACACC 61.272 60.000 0.00 0.00 34.73 4.16
2625 4856 1.229820 ATGGCTAGGGGACACACCA 60.230 57.895 0.00 0.00 41.20 4.17
2626 4857 0.624500 ATGGCTAGGGGACACACCAT 60.625 55.000 0.00 0.00 41.20 3.55
2627 4858 1.271840 TGGCTAGGGGACACACCATC 61.272 60.000 0.00 0.00 41.20 3.51
2628 4859 1.271840 GGCTAGGGGACACACCATCA 61.272 60.000 0.00 0.00 41.20 3.07
2629 4860 0.839946 GCTAGGGGACACACCATCAT 59.160 55.000 0.00 0.00 41.20 2.45
2630 4861 1.202698 GCTAGGGGACACACCATCATC 60.203 57.143 0.00 0.00 41.20 2.92
2631 4862 2.118679 CTAGGGGACACACCATCATCA 58.881 52.381 0.00 0.00 41.20 3.07
2632 4863 0.620556 AGGGGACACACCATCATCAC 59.379 55.000 0.00 0.00 41.20 3.06
2633 4864 0.394352 GGGGACACACCATCATCACC 60.394 60.000 0.00 0.00 41.20 4.02
2634 4865 0.327924 GGGACACACCATCATCACCA 59.672 55.000 0.00 0.00 41.20 4.17
2635 4866 1.271871 GGGACACACCATCATCACCAA 60.272 52.381 0.00 0.00 41.20 3.67
2636 4867 1.812571 GGACACACCATCATCACCAAC 59.187 52.381 0.00 0.00 38.79 3.77
2637 4868 2.553028 GGACACACCATCATCACCAACT 60.553 50.000 0.00 0.00 38.79 3.16
2638 4869 2.485426 GACACACCATCATCACCAACTG 59.515 50.000 0.00 0.00 0.00 3.16
2639 4870 2.106338 ACACACCATCATCACCAACTGA 59.894 45.455 0.00 0.00 0.00 3.41
2640 4871 2.745821 CACACCATCATCACCAACTGAG 59.254 50.000 0.00 0.00 30.20 3.35
2641 4872 2.373169 ACACCATCATCACCAACTGAGT 59.627 45.455 0.00 0.00 30.20 3.41
2642 4873 3.005554 CACCATCATCACCAACTGAGTC 58.994 50.000 0.00 0.00 30.20 3.36
2643 4874 2.909006 ACCATCATCACCAACTGAGTCT 59.091 45.455 0.00 0.00 30.20 3.24
2644 4875 3.328931 ACCATCATCACCAACTGAGTCTT 59.671 43.478 0.00 0.00 30.20 3.01
2645 4876 4.202503 ACCATCATCACCAACTGAGTCTTT 60.203 41.667 0.00 0.00 30.20 2.52
2646 4877 4.763793 CCATCATCACCAACTGAGTCTTTT 59.236 41.667 0.00 0.00 30.20 2.27
2647 4878 5.939883 CCATCATCACCAACTGAGTCTTTTA 59.060 40.000 0.00 0.00 30.20 1.52
2648 4879 6.600822 CCATCATCACCAACTGAGTCTTTTAT 59.399 38.462 0.00 0.00 30.20 1.40
2649 4880 7.770433 CCATCATCACCAACTGAGTCTTTTATA 59.230 37.037 0.00 0.00 30.20 0.98
2650 4881 8.824781 CATCATCACCAACTGAGTCTTTTATAG 58.175 37.037 0.00 0.00 30.20 1.31
2651 4882 7.331026 TCATCACCAACTGAGTCTTTTATAGG 58.669 38.462 0.00 0.00 30.20 2.57
2652 4883 6.928348 TCACCAACTGAGTCTTTTATAGGA 57.072 37.500 0.00 0.00 0.00 2.94
2653 4884 6.936279 TCACCAACTGAGTCTTTTATAGGAG 58.064 40.000 0.00 0.00 0.00 3.69
2654 4885 6.497259 TCACCAACTGAGTCTTTTATAGGAGT 59.503 38.462 0.00 0.00 0.00 3.85
2655 4886 7.672660 TCACCAACTGAGTCTTTTATAGGAGTA 59.327 37.037 0.00 0.00 0.00 2.59
2656 4887 8.478877 CACCAACTGAGTCTTTTATAGGAGTAT 58.521 37.037 0.00 0.00 0.00 2.12
2657 4888 9.710818 ACCAACTGAGTCTTTTATAGGAGTATA 57.289 33.333 0.00 0.00 0.00 1.47
2687 4918 7.726033 AGATATAGAAGTGTCCACTGAACTT 57.274 36.000 0.00 0.00 41.58 2.66
2688 4919 8.140112 AGATATAGAAGTGTCCACTGAACTTT 57.860 34.615 0.00 0.70 41.58 2.66
2689 4920 8.254508 AGATATAGAAGTGTCCACTGAACTTTC 58.745 37.037 0.00 0.00 41.58 2.62
2690 4921 4.762289 AGAAGTGTCCACTGAACTTTCT 57.238 40.909 0.00 0.00 41.58 2.52
2691 4922 4.446371 AGAAGTGTCCACTGAACTTTCTG 58.554 43.478 0.00 0.00 41.58 3.02
2692 4923 4.162320 AGAAGTGTCCACTGAACTTTCTGA 59.838 41.667 0.00 0.00 41.58 3.27
2693 4924 4.696479 AGTGTCCACTGAACTTTCTGAT 57.304 40.909 0.00 0.00 40.75 2.90
2694 4925 5.041191 AGTGTCCACTGAACTTTCTGATT 57.959 39.130 0.00 0.00 40.75 2.57
2695 4926 5.440610 AGTGTCCACTGAACTTTCTGATTT 58.559 37.500 0.00 0.00 40.75 2.17
2696 4927 5.529060 AGTGTCCACTGAACTTTCTGATTTC 59.471 40.000 0.00 0.00 40.75 2.17
2697 4928 5.529060 GTGTCCACTGAACTTTCTGATTTCT 59.471 40.000 3.15 0.00 0.00 2.52
2698 4929 5.528690 TGTCCACTGAACTTTCTGATTTCTG 59.471 40.000 3.15 0.00 0.00 3.02
2699 4930 4.516698 TCCACTGAACTTTCTGATTTCTGC 59.483 41.667 3.15 0.00 0.00 4.26
2700 4931 4.276678 CCACTGAACTTTCTGATTTCTGCA 59.723 41.667 3.15 0.00 0.00 4.41
2701 4932 5.221106 CCACTGAACTTTCTGATTTCTGCAA 60.221 40.000 3.15 0.00 0.00 4.08
2702 4933 5.684626 CACTGAACTTTCTGATTTCTGCAAC 59.315 40.000 3.15 0.00 0.00 4.17
2703 4934 5.591877 ACTGAACTTTCTGATTTCTGCAACT 59.408 36.000 3.15 0.00 0.00 3.16
2704 4935 6.064846 TGAACTTTCTGATTTCTGCAACTC 57.935 37.500 0.00 0.00 0.00 3.01
2705 4936 5.589855 TGAACTTTCTGATTTCTGCAACTCA 59.410 36.000 0.00 0.00 0.00 3.41
2706 4937 6.263842 TGAACTTTCTGATTTCTGCAACTCAT 59.736 34.615 0.00 0.00 0.00 2.90
2707 4938 6.251655 ACTTTCTGATTTCTGCAACTCATC 57.748 37.500 0.00 0.00 0.00 2.92
2708 4939 6.002704 ACTTTCTGATTTCTGCAACTCATCT 58.997 36.000 0.00 0.00 0.00 2.90
2709 4940 6.489361 ACTTTCTGATTTCTGCAACTCATCTT 59.511 34.615 0.00 0.00 0.00 2.40
2710 4941 6.889301 TTCTGATTTCTGCAACTCATCTTT 57.111 33.333 0.00 0.00 0.00 2.52
2711 4942 7.984422 TTCTGATTTCTGCAACTCATCTTTA 57.016 32.000 0.00 0.00 0.00 1.85
2712 4943 7.606858 TCTGATTTCTGCAACTCATCTTTAG 57.393 36.000 0.00 0.00 0.00 1.85
2713 4944 7.164122 TCTGATTTCTGCAACTCATCTTTAGT 58.836 34.615 0.00 0.00 0.00 2.24
2714 4945 8.314021 TCTGATTTCTGCAACTCATCTTTAGTA 58.686 33.333 0.00 0.00 0.00 1.82
2715 4946 8.256611 TGATTTCTGCAACTCATCTTTAGTAC 57.743 34.615 0.00 0.00 0.00 2.73
2716 4947 8.097038 TGATTTCTGCAACTCATCTTTAGTACT 58.903 33.333 0.00 0.00 0.00 2.73
2717 4948 7.891183 TTTCTGCAACTCATCTTTAGTACTC 57.109 36.000 0.00 0.00 0.00 2.59
2718 4949 5.967088 TCTGCAACTCATCTTTAGTACTCC 58.033 41.667 0.00 0.00 0.00 3.85
2719 4950 5.480422 TCTGCAACTCATCTTTAGTACTCCA 59.520 40.000 0.00 0.00 0.00 3.86
2720 4951 5.479306 TGCAACTCATCTTTAGTACTCCAC 58.521 41.667 0.00 0.00 0.00 4.02
2721 4952 5.246203 TGCAACTCATCTTTAGTACTCCACT 59.754 40.000 0.00 0.00 41.62 4.00
2722 4953 5.578727 GCAACTCATCTTTAGTACTCCACTG 59.421 44.000 0.00 0.00 38.24 3.66
2723 4954 5.331876 ACTCATCTTTAGTACTCCACTGC 57.668 43.478 0.00 0.00 38.24 4.40
2724 4955 5.020132 ACTCATCTTTAGTACTCCACTGCT 58.980 41.667 0.00 0.00 38.24 4.24
2725 4956 6.188407 ACTCATCTTTAGTACTCCACTGCTA 58.812 40.000 0.00 0.00 38.24 3.49
2726 4957 6.836527 ACTCATCTTTAGTACTCCACTGCTAT 59.163 38.462 0.00 0.00 38.24 2.97
2727 4958 7.043961 TCATCTTTAGTACTCCACTGCTATG 57.956 40.000 0.00 0.00 38.24 2.23
2728 4959 5.854010 TCTTTAGTACTCCACTGCTATGG 57.146 43.478 0.00 0.64 38.24 2.74
2729 4960 5.269991 TCTTTAGTACTCCACTGCTATGGT 58.730 41.667 0.00 0.00 40.95 3.55
2730 4961 5.720041 TCTTTAGTACTCCACTGCTATGGTT 59.280 40.000 0.00 0.00 40.95 3.67
2731 4962 6.212791 TCTTTAGTACTCCACTGCTATGGTTT 59.787 38.462 0.00 0.00 40.95 3.27
2732 4963 7.398047 TCTTTAGTACTCCACTGCTATGGTTTA 59.602 37.037 0.00 0.00 40.95 2.01
2733 4964 5.599999 AGTACTCCACTGCTATGGTTTAG 57.400 43.478 6.69 0.83 40.95 1.85
2734 4965 5.024118 AGTACTCCACTGCTATGGTTTAGT 58.976 41.667 6.69 5.98 40.95 2.24
2735 4966 6.192773 AGTACTCCACTGCTATGGTTTAGTA 58.807 40.000 6.69 5.17 40.95 1.82
2736 4967 6.666546 AGTACTCCACTGCTATGGTTTAGTAA 59.333 38.462 6.69 0.00 40.95 2.24
2737 4968 6.561519 ACTCCACTGCTATGGTTTAGTAAT 57.438 37.500 6.69 0.00 40.95 1.89
2738 4969 6.583562 ACTCCACTGCTATGGTTTAGTAATC 58.416 40.000 6.69 0.00 40.95 1.75
2739 4970 5.597806 TCCACTGCTATGGTTTAGTAATCG 58.402 41.667 6.69 0.00 40.95 3.34
2740 4971 5.361571 TCCACTGCTATGGTTTAGTAATCGA 59.638 40.000 6.69 0.00 40.95 3.59
2741 4972 6.041637 TCCACTGCTATGGTTTAGTAATCGAT 59.958 38.462 6.69 0.00 40.95 3.59
2742 4973 6.146184 CCACTGCTATGGTTTAGTAATCGATG 59.854 42.308 0.00 0.00 34.77 3.84
2743 4974 6.923508 CACTGCTATGGTTTAGTAATCGATGA 59.076 38.462 0.00 0.00 0.00 2.92
2744 4975 7.438160 CACTGCTATGGTTTAGTAATCGATGAA 59.562 37.037 0.00 0.00 0.00 2.57
2745 4976 7.985184 ACTGCTATGGTTTAGTAATCGATGAAA 59.015 33.333 0.00 0.00 0.00 2.69
2746 4977 8.365399 TGCTATGGTTTAGTAATCGATGAAAG 57.635 34.615 0.00 0.00 0.00 2.62
2747 4978 7.042051 TGCTATGGTTTAGTAATCGATGAAAGC 60.042 37.037 0.00 7.95 0.00 3.51
2748 4979 7.042051 GCTATGGTTTAGTAATCGATGAAAGCA 60.042 37.037 20.13 20.13 40.53 3.91
2749 4980 6.417191 TGGTTTAGTAATCGATGAAAGCAC 57.583 37.500 16.67 5.31 33.82 4.40
2750 4981 6.170506 TGGTTTAGTAATCGATGAAAGCACT 58.829 36.000 16.67 9.28 33.82 4.40
2751 4982 7.324935 TGGTTTAGTAATCGATGAAAGCACTA 58.675 34.615 16.67 8.58 33.82 2.74
2752 4983 7.820386 TGGTTTAGTAATCGATGAAAGCACTAA 59.180 33.333 16.67 12.34 33.82 2.24
2753 4984 8.662141 GGTTTAGTAATCGATGAAAGCACTAAA 58.338 33.333 0.00 9.45 35.66 1.85
2754 4985 9.690434 GTTTAGTAATCGATGAAAGCACTAAAG 57.310 33.333 17.07 0.00 37.55 1.85
2755 4986 8.997621 TTAGTAATCGATGAAAGCACTAAAGT 57.002 30.769 0.00 0.00 0.00 2.66
2756 4987 7.907214 AGTAATCGATGAAAGCACTAAAGTT 57.093 32.000 0.00 0.00 0.00 2.66
2757 4988 7.965045 AGTAATCGATGAAAGCACTAAAGTTC 58.035 34.615 0.00 0.00 0.00 3.01
2758 4989 7.819900 AGTAATCGATGAAAGCACTAAAGTTCT 59.180 33.333 0.00 0.00 0.00 3.01
2759 4990 5.845985 TCGATGAAAGCACTAAAGTTCTG 57.154 39.130 0.00 0.00 0.00 3.02
2760 4991 4.152402 TCGATGAAAGCACTAAAGTTCTGC 59.848 41.667 0.00 0.00 0.00 4.26
2761 4992 4.083855 CGATGAAAGCACTAAAGTTCTGCA 60.084 41.667 0.00 0.00 0.00 4.41
2762 4993 4.818534 TGAAAGCACTAAAGTTCTGCAG 57.181 40.909 7.63 7.63 0.00 4.41
2769 5000 5.814705 AGCACTAAAGTTCTGCAGATGTATC 59.185 40.000 19.04 6.28 0.00 2.24
2819 5050 5.346522 ACGTGAACTCGGATTTATTACCTC 58.653 41.667 0.00 0.00 34.94 3.85
2870 5101 2.863809 ACAAAGGTAGCACTTGGAAGG 58.136 47.619 10.40 0.00 0.00 3.46
2891 5122 5.381757 AGGCATACTTTACTGGTGTCAAAA 58.618 37.500 0.00 0.00 0.00 2.44
2899 5130 6.750039 ACTTTACTGGTGTCAAAATGAAAACG 59.250 34.615 0.00 0.00 0.00 3.60
2916 5147 1.781555 CGTTCACGTCACTGGATGC 59.218 57.895 0.00 0.00 33.10 3.91
2991 5222 4.107127 ACTGTAGTGGGTTTTGCCAATA 57.893 40.909 0.00 0.00 39.65 1.90
3071 5302 1.153005 CCAAGGGGAGCTGATCTGC 60.153 63.158 16.18 16.18 35.59 4.26
3137 5368 8.820933 TGAATGAATAGATCGATGACAAACTTC 58.179 33.333 0.54 0.00 0.00 3.01
3138 5369 7.721286 ATGAATAGATCGATGACAAACTTCC 57.279 36.000 0.54 0.00 0.00 3.46
3141 5372 6.910536 ATAGATCGATGACAAACTTCCAAC 57.089 37.500 0.54 0.00 0.00 3.77
3142 5373 4.003648 AGATCGATGACAAACTTCCAACC 58.996 43.478 0.54 0.00 0.00 3.77
3143 5374 2.139917 TCGATGACAAACTTCCAACCG 58.860 47.619 0.00 0.00 0.00 4.44
3155 5386 0.109723 TCCAACCGAGAAACAAGGGG 59.890 55.000 0.00 0.00 0.00 4.79
3159 5390 0.988832 ACCGAGAAACAAGGGGCATA 59.011 50.000 0.00 0.00 0.00 3.14
3162 5393 2.009774 CGAGAAACAAGGGGCATACAG 58.990 52.381 0.00 0.00 0.00 2.74
3163 5394 2.354704 CGAGAAACAAGGGGCATACAGA 60.355 50.000 0.00 0.00 0.00 3.41
3171 5402 1.427368 AGGGGCATACAGACACCAAAA 59.573 47.619 0.00 0.00 0.00 2.44
3178 5409 5.048364 GGCATACAGACACCAAAACATTGTA 60.048 40.000 0.00 0.00 0.00 2.41
3179 5410 5.856455 GCATACAGACACCAAAACATTGTAC 59.144 40.000 0.00 0.00 0.00 2.90
3182 5413 5.830912 ACAGACACCAAAACATTGTACATG 58.169 37.500 0.00 0.00 0.00 3.21
3189 5420 8.200792 ACACCAAAACATTGTACATGTATTGTT 58.799 29.630 18.49 18.49 39.87 2.83
3194 5425 9.809096 AAAACATTGTACATGTATTGTTTGTGA 57.191 25.926 27.27 0.81 39.87 3.58
3196 5427 7.083858 ACATTGTACATGTATTGTTTGTGAGC 58.916 34.615 9.18 0.00 39.87 4.26
3197 5428 6.625873 TTGTACATGTATTGTTTGTGAGCA 57.374 33.333 9.18 0.00 39.87 4.26
3198 5429 6.816134 TGTACATGTATTGTTTGTGAGCAT 57.184 33.333 9.18 0.00 39.87 3.79
3202 5433 9.619316 GTACATGTATTGTTTGTGAGCATTTTA 57.381 29.630 9.18 0.00 39.87 1.52
3204 5435 9.709495 ACATGTATTGTTTGTGAGCATTTTATT 57.291 25.926 0.00 0.00 33.74 1.40
3250 5486 0.889186 CCCCGTTTGTTCCTCTGGTG 60.889 60.000 0.00 0.00 0.00 4.17
3485 5721 4.286032 TCTTGGTGCACTATCCTGTAAGTT 59.714 41.667 17.98 0.00 0.00 2.66
3555 5791 5.602145 AGTTTCCAATTTGACAATTCCCTCA 59.398 36.000 0.00 0.00 29.41 3.86
3714 5950 4.141597 TGAGTATATTCGCCAAATGTCCCA 60.142 41.667 0.00 0.00 0.00 4.37
3724 5960 1.406539 CAAATGTCCCACTAGCATGCC 59.593 52.381 15.66 0.00 0.00 4.40
3786 6022 4.280677 AGCCTGACTCATTATCTACTCAGC 59.719 45.833 0.00 0.00 0.00 4.26
3834 6070 1.600916 ACAGCTTGGGTTTCCTCGC 60.601 57.895 0.00 0.00 0.00 5.03
3882 6118 1.000163 GACTCTGGTGTTCGAGAAGCA 60.000 52.381 0.00 1.99 0.00 3.91
3963 6199 2.055042 AGAGCAGGACAGGCTACGG 61.055 63.158 0.00 0.00 42.78 4.02
4063 6299 3.442625 ACTCGTCGACTCATTGTGGATTA 59.557 43.478 14.70 0.00 35.89 1.75
4386 6631 7.978975 GCTAGAAATATCAGGGCTAGTTCTATG 59.021 40.741 0.00 0.91 36.05 2.23
4443 6688 3.315191 AGTGGTATGTTGTTGTTGAGTGC 59.685 43.478 0.00 0.00 0.00 4.40
5059 7783 2.202810 GTAGTGCTCCAGCCTCGC 60.203 66.667 0.00 0.00 41.18 5.03
5079 7803 2.185350 CGATGCCGTGCTCCTCTT 59.815 61.111 0.00 0.00 0.00 2.85
5129 7853 3.323758 GACCATGCCACCGTAGCCA 62.324 63.158 0.00 0.00 0.00 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.694760 GCAGAAGAGGGCCAAAGCG 61.695 63.158 6.18 0.00 41.24 4.68
73 74 2.563179 CGAGAAGTTTGAGAGGGAGGAA 59.437 50.000 0.00 0.00 0.00 3.36
159 176 2.345244 CTCGGTGCTGACCTTGCT 59.655 61.111 0.00 0.00 40.58 3.91
160 177 3.426568 GCTCGGTGCTGACCTTGC 61.427 66.667 0.00 0.00 40.58 4.01
162 179 3.241530 TGGCTCGGTGCTGACCTT 61.242 61.111 1.77 0.00 40.58 3.50
176 193 1.673009 TTTTCGGATGGTCGGTGGC 60.673 57.895 0.00 0.00 0.00 5.01
177 194 0.604243 TGTTTTCGGATGGTCGGTGG 60.604 55.000 0.00 0.00 0.00 4.61
178 195 1.069500 GTTGTTTTCGGATGGTCGGTG 60.069 52.381 0.00 0.00 0.00 4.94
179 196 1.232119 GTTGTTTTCGGATGGTCGGT 58.768 50.000 0.00 0.00 0.00 4.69
180 197 1.069500 GTGTTGTTTTCGGATGGTCGG 60.069 52.381 0.00 0.00 0.00 4.79
181 198 1.871039 AGTGTTGTTTTCGGATGGTCG 59.129 47.619 0.00 0.00 0.00 4.79
182 199 2.616842 ACAGTGTTGTTTTCGGATGGTC 59.383 45.455 0.00 0.00 32.28 4.02
183 200 2.616842 GACAGTGTTGTTTTCGGATGGT 59.383 45.455 0.00 0.00 37.76 3.55
184 201 2.031157 GGACAGTGTTGTTTTCGGATGG 60.031 50.000 0.00 0.00 37.76 3.51
185 202 2.616376 TGGACAGTGTTGTTTTCGGATG 59.384 45.455 0.00 0.00 37.76 3.51
190 207 4.445385 GCATTGATGGACAGTGTTGTTTTC 59.555 41.667 0.00 0.00 37.76 2.29
195 212 3.646611 TTGCATTGATGGACAGTGTTG 57.353 42.857 0.00 0.00 38.28 3.33
223 240 0.250124 CGCCCCGCCTGTATAATGAA 60.250 55.000 0.00 0.00 0.00 2.57
224 241 1.116536 TCGCCCCGCCTGTATAATGA 61.117 55.000 0.00 0.00 0.00 2.57
225 242 0.250124 TTCGCCCCGCCTGTATAATG 60.250 55.000 0.00 0.00 0.00 1.90
226 243 0.470766 TTTCGCCCCGCCTGTATAAT 59.529 50.000 0.00 0.00 0.00 1.28
228 245 0.250124 CATTTCGCCCCGCCTGTATA 60.250 55.000 0.00 0.00 0.00 1.47
231 248 2.837031 AATCATTTCGCCCCGCCTGT 62.837 55.000 0.00 0.00 0.00 4.00
232 249 2.063541 GAATCATTTCGCCCCGCCTG 62.064 60.000 0.00 0.00 0.00 4.85
245 2244 4.034048 GCGTTTGTTATCTGTCCGAATCAT 59.966 41.667 0.00 0.00 0.00 2.45
253 2252 2.470140 CGTGACGCGTTTGTTATCTGTC 60.470 50.000 15.53 0.00 35.54 3.51
254 2253 1.454276 CGTGACGCGTTTGTTATCTGT 59.546 47.619 15.53 0.00 35.54 3.41
255 2254 1.782023 GCGTGACGCGTTTGTTATCTG 60.782 52.381 16.19 0.00 44.55 2.90
256 2255 0.437295 GCGTGACGCGTTTGTTATCT 59.563 50.000 16.19 0.00 44.55 1.98
257 2256 2.893886 GCGTGACGCGTTTGTTATC 58.106 52.632 16.19 0.00 44.55 1.75
284 2289 2.766229 GGCCTCTCCCTCCTCACC 60.766 72.222 0.00 0.00 0.00 4.02
359 2364 2.184830 CATGATGAGGGTGGCTGCG 61.185 63.158 0.00 0.00 0.00 5.18
864 2879 2.717809 GGTGAGCGCTCGTTCGTTC 61.718 63.158 30.75 14.53 39.59 3.95
903 2918 3.488090 GTCGCGGTTAGCCTGTGC 61.488 66.667 6.13 0.00 44.76 4.57
904 2919 2.048597 TGTCGCGGTTAGCCTGTG 60.049 61.111 6.13 0.00 44.76 3.66
905 2920 2.048503 GTGTCGCGGTTAGCCTGT 60.049 61.111 6.13 0.00 44.76 4.00
906 2921 2.813908 GGTGTCGCGGTTAGCCTG 60.814 66.667 6.13 0.00 44.76 4.85
907 2922 4.430765 CGGTGTCGCGGTTAGCCT 62.431 66.667 6.13 0.00 44.76 4.58
968 2983 0.461870 CCGCTCCCGAATCACAATCA 60.462 55.000 0.00 0.00 36.29 2.57
1129 3147 3.741476 CTCAGCCGCAGCCCAAAC 61.741 66.667 0.00 0.00 41.25 2.93
1152 3170 3.022287 CACACAGAACGCCACACC 58.978 61.111 0.00 0.00 0.00 4.16
1341 3362 1.345415 ACTACCAATCGACCACCGTTT 59.655 47.619 0.00 0.00 39.75 3.60
1414 3461 4.038162 TGGGCAAATTGTTAGTACCACAAC 59.962 41.667 9.78 3.59 36.97 3.32
1422 3469 2.632512 CAAGGGTGGGCAAATTGTTAGT 59.367 45.455 0.00 0.00 0.00 2.24
1446 3493 5.061853 CAGAACCATCCATATTCCAGTCTG 58.938 45.833 0.00 0.00 0.00 3.51
1534 3581 6.905544 TTACGAATACCAATCGCAATGTTA 57.094 33.333 0.00 0.00 43.88 2.41
1570 3617 0.110238 CAAATCCACTGTCGCCAACG 60.110 55.000 0.00 0.00 42.01 4.10
2053 4276 2.143876 AACCATAGTTGGACCATGGC 57.856 50.000 13.04 4.47 46.92 4.40
2072 4295 2.665165 CCATGCTAAGCCAACCCATAA 58.335 47.619 0.00 0.00 0.00 1.90
2095 4318 7.280205 GGTCGTCAAAAGGATATGACTTATGTT 59.720 37.037 4.62 0.00 42.93 2.71
2096 4319 6.761714 GGTCGTCAAAAGGATATGACTTATGT 59.238 38.462 4.62 0.00 42.93 2.29
2119 4342 1.599047 CGTGAGCATCCCAAGAGGT 59.401 57.895 0.00 0.00 36.75 3.85
2311 4542 4.169059 TGGGCACATTGCTAGTTATGAT 57.831 40.909 11.60 0.00 44.28 2.45
2312 4543 3.643199 TGGGCACATTGCTAGTTATGA 57.357 42.857 11.60 0.00 44.28 2.15
2313 4544 3.551454 GCATGGGCACATTGCTAGTTATG 60.551 47.826 0.00 0.00 44.28 1.90
2314 4545 2.624838 GCATGGGCACATTGCTAGTTAT 59.375 45.455 0.00 0.00 44.28 1.89
2315 4546 2.023673 GCATGGGCACATTGCTAGTTA 58.976 47.619 0.00 0.00 44.28 2.24
2316 4547 0.819582 GCATGGGCACATTGCTAGTT 59.180 50.000 0.00 0.00 44.28 2.24
2317 4548 1.378882 CGCATGGGCACATTGCTAGT 61.379 55.000 17.42 0.00 44.28 2.57
2318 4549 1.357690 CGCATGGGCACATTGCTAG 59.642 57.895 17.42 0.95 44.28 3.42
2319 4550 0.964860 AACGCATGGGCACATTGCTA 60.965 50.000 17.42 0.00 44.28 3.49
2320 4551 2.277591 AACGCATGGGCACATTGCT 61.278 52.632 17.42 5.93 44.28 3.91
2321 4552 2.095847 CAACGCATGGGCACATTGC 61.096 57.895 10.10 5.97 44.08 3.56
2322 4553 2.095847 GCAACGCATGGGCACATTG 61.096 57.895 10.10 7.97 41.24 2.82
2323 4554 2.097201 TTGCAACGCATGGGCACATT 62.097 50.000 10.10 0.00 38.76 2.71
2324 4555 2.572149 TTGCAACGCATGGGCACAT 61.572 52.632 10.10 0.00 38.76 3.21
2325 4556 3.222121 TTGCAACGCATGGGCACA 61.222 55.556 10.10 0.00 38.76 4.57
2326 4557 2.734346 GTTGCAACGCATGGGCAC 60.734 61.111 14.90 0.00 38.76 5.01
2327 4558 4.340019 CGTTGCAACGCATGGGCA 62.340 61.111 35.89 0.00 46.06 5.36
2336 4567 3.071479 TCTACTTTGGATCCGTTGCAAC 58.929 45.455 19.89 19.89 35.14 4.17
2337 4568 3.410631 TCTACTTTGGATCCGTTGCAA 57.589 42.857 7.39 0.00 33.34 4.08
2338 4569 3.410631 TTCTACTTTGGATCCGTTGCA 57.589 42.857 7.39 0.00 0.00 4.08
2339 4570 6.619801 ATTATTCTACTTTGGATCCGTTGC 57.380 37.500 7.39 0.00 0.00 4.17
2340 4571 8.888579 AGTATTATTCTACTTTGGATCCGTTG 57.111 34.615 7.39 1.61 0.00 4.10
2367 4598 9.657419 AGAGTGTTTTCTTTCAAATTTGTGAAT 57.343 25.926 17.47 6.21 37.36 2.57
2368 4599 9.487790 AAGAGTGTTTTCTTTCAAATTTGTGAA 57.512 25.926 17.47 15.86 33.74 3.18
2434 4665 9.874215 GCCCGAGTAATATATTTTTAGTGAAAC 57.126 33.333 2.68 0.00 0.00 2.78
2435 4666 9.841295 AGCCCGAGTAATATATTTTTAGTGAAA 57.159 29.630 2.68 0.00 0.00 2.69
2436 4667 9.268268 CAGCCCGAGTAATATATTTTTAGTGAA 57.732 33.333 2.68 0.00 0.00 3.18
2437 4668 8.426489 ACAGCCCGAGTAATATATTTTTAGTGA 58.574 33.333 2.68 0.00 0.00 3.41
2438 4669 8.603242 ACAGCCCGAGTAATATATTTTTAGTG 57.397 34.615 2.68 0.00 0.00 2.74
2439 4670 9.623000 AAACAGCCCGAGTAATATATTTTTAGT 57.377 29.630 2.68 0.00 0.00 2.24
2442 4673 8.962679 TCAAAACAGCCCGAGTAATATATTTTT 58.037 29.630 2.68 0.00 0.00 1.94
2443 4674 8.514330 TCAAAACAGCCCGAGTAATATATTTT 57.486 30.769 2.68 0.00 0.00 1.82
2444 4675 8.567948 CATCAAAACAGCCCGAGTAATATATTT 58.432 33.333 2.68 0.00 0.00 1.40
2445 4676 7.936847 TCATCAAAACAGCCCGAGTAATATATT 59.063 33.333 2.97 2.97 0.00 1.28
2446 4677 7.450074 TCATCAAAACAGCCCGAGTAATATAT 58.550 34.615 0.00 0.00 0.00 0.86
2447 4678 6.822442 TCATCAAAACAGCCCGAGTAATATA 58.178 36.000 0.00 0.00 0.00 0.86
2448 4679 5.680619 TCATCAAAACAGCCCGAGTAATAT 58.319 37.500 0.00 0.00 0.00 1.28
2449 4680 5.092554 TCATCAAAACAGCCCGAGTAATA 57.907 39.130 0.00 0.00 0.00 0.98
2450 4681 3.941483 CTCATCAAAACAGCCCGAGTAAT 59.059 43.478 0.00 0.00 0.00 1.89
2451 4682 3.334691 CTCATCAAAACAGCCCGAGTAA 58.665 45.455 0.00 0.00 0.00 2.24
2452 4683 2.354704 CCTCATCAAAACAGCCCGAGTA 60.355 50.000 0.00 0.00 0.00 2.59
2453 4684 1.611673 CCTCATCAAAACAGCCCGAGT 60.612 52.381 0.00 0.00 0.00 4.18
2454 4685 1.089920 CCTCATCAAAACAGCCCGAG 58.910 55.000 0.00 0.00 0.00 4.63
2455 4686 0.400213 ACCTCATCAAAACAGCCCGA 59.600 50.000 0.00 0.00 0.00 5.14
2456 4687 0.523072 CACCTCATCAAAACAGCCCG 59.477 55.000 0.00 0.00 0.00 6.13
2457 4688 1.815003 CTCACCTCATCAAAACAGCCC 59.185 52.381 0.00 0.00 0.00 5.19
2458 4689 1.815003 CCTCACCTCATCAAAACAGCC 59.185 52.381 0.00 0.00 0.00 4.85
2459 4690 1.815003 CCCTCACCTCATCAAAACAGC 59.185 52.381 0.00 0.00 0.00 4.40
2460 4691 3.341823 CTCCCTCACCTCATCAAAACAG 58.658 50.000 0.00 0.00 0.00 3.16
2461 4692 2.040278 CCTCCCTCACCTCATCAAAACA 59.960 50.000 0.00 0.00 0.00 2.83
2462 4693 2.619074 CCCTCCCTCACCTCATCAAAAC 60.619 54.545 0.00 0.00 0.00 2.43
2463 4694 1.635487 CCCTCCCTCACCTCATCAAAA 59.365 52.381 0.00 0.00 0.00 2.44
2464 4695 1.203428 TCCCTCCCTCACCTCATCAAA 60.203 52.381 0.00 0.00 0.00 2.69
2465 4696 0.417437 TCCCTCCCTCACCTCATCAA 59.583 55.000 0.00 0.00 0.00 2.57
2466 4697 0.644380 ATCCCTCCCTCACCTCATCA 59.356 55.000 0.00 0.00 0.00 3.07
2467 4698 1.055040 CATCCCTCCCTCACCTCATC 58.945 60.000 0.00 0.00 0.00 2.92
2468 4699 0.344790 ACATCCCTCCCTCACCTCAT 59.655 55.000 0.00 0.00 0.00 2.90
2469 4700 0.618680 CACATCCCTCCCTCACCTCA 60.619 60.000 0.00 0.00 0.00 3.86
2470 4701 1.341156 CCACATCCCTCCCTCACCTC 61.341 65.000 0.00 0.00 0.00 3.85
2471 4702 1.307343 CCACATCCCTCCCTCACCT 60.307 63.158 0.00 0.00 0.00 4.00
2472 4703 1.208165 AACCACATCCCTCCCTCACC 61.208 60.000 0.00 0.00 0.00 4.02
2473 4704 0.035056 CAACCACATCCCTCCCTCAC 60.035 60.000 0.00 0.00 0.00 3.51
2474 4705 1.207488 CCAACCACATCCCTCCCTCA 61.207 60.000 0.00 0.00 0.00 3.86
2475 4706 1.208165 ACCAACCACATCCCTCCCTC 61.208 60.000 0.00 0.00 0.00 4.30
2476 4707 0.776080 AACCAACCACATCCCTCCCT 60.776 55.000 0.00 0.00 0.00 4.20
2477 4708 0.323451 GAACCAACCACATCCCTCCC 60.323 60.000 0.00 0.00 0.00 4.30
2478 4709 0.323451 GGAACCAACCACATCCCTCC 60.323 60.000 0.00 0.00 0.00 4.30
2479 4710 0.404040 TGGAACCAACCACATCCCTC 59.596 55.000 0.00 0.00 34.77 4.30
2480 4711 0.856982 TTGGAACCAACCACATCCCT 59.143 50.000 1.83 0.00 39.85 4.20
2481 4712 1.203001 TCTTGGAACCAACCACATCCC 60.203 52.381 1.83 0.00 39.85 3.85
2482 4713 2.286365 TCTTGGAACCAACCACATCC 57.714 50.000 1.83 0.00 39.85 3.51
2483 4714 4.589908 AGTATCTTGGAACCAACCACATC 58.410 43.478 1.83 0.00 39.85 3.06
2484 4715 4.657814 AGTATCTTGGAACCAACCACAT 57.342 40.909 1.83 0.00 39.85 3.21
2485 4716 5.514136 CCTTAGTATCTTGGAACCAACCACA 60.514 44.000 1.83 0.00 39.85 4.17
2486 4717 4.941873 CCTTAGTATCTTGGAACCAACCAC 59.058 45.833 1.83 1.68 39.85 4.16
2487 4718 4.018779 CCCTTAGTATCTTGGAACCAACCA 60.019 45.833 1.83 0.00 38.24 3.67
2488 4719 4.524053 CCCTTAGTATCTTGGAACCAACC 58.476 47.826 1.83 0.00 0.00 3.77
2489 4720 4.018688 ACCCCTTAGTATCTTGGAACCAAC 60.019 45.833 1.83 0.00 0.00 3.77
2490 4721 4.180723 ACCCCTTAGTATCTTGGAACCAA 58.819 43.478 6.12 6.12 0.00 3.67
2491 4722 3.810623 ACCCCTTAGTATCTTGGAACCA 58.189 45.455 0.00 0.00 0.00 3.67
2492 4723 4.857130 AACCCCTTAGTATCTTGGAACC 57.143 45.455 0.00 0.00 0.00 3.62
2513 4744 4.669206 TCTCTGCTCCAATTTGCAAAAA 57.331 36.364 17.19 0.00 38.81 1.94
2514 4745 4.099881 ACTTCTCTGCTCCAATTTGCAAAA 59.900 37.500 17.19 0.00 38.81 2.44
2515 4746 3.638160 ACTTCTCTGCTCCAATTTGCAAA 59.362 39.130 15.44 15.44 38.81 3.68
2516 4747 3.005050 CACTTCTCTGCTCCAATTTGCAA 59.995 43.478 0.00 0.00 38.81 4.08
2517 4748 2.555325 CACTTCTCTGCTCCAATTTGCA 59.445 45.455 0.00 0.00 37.63 4.08
2518 4749 2.094854 CCACTTCTCTGCTCCAATTTGC 60.095 50.000 0.00 0.00 0.00 3.68
2519 4750 2.490903 CCCACTTCTCTGCTCCAATTTG 59.509 50.000 0.00 0.00 0.00 2.32
2520 4751 2.800250 CCCACTTCTCTGCTCCAATTT 58.200 47.619 0.00 0.00 0.00 1.82
2521 4752 1.615384 GCCCACTTCTCTGCTCCAATT 60.615 52.381 0.00 0.00 0.00 2.32
2522 4753 0.034670 GCCCACTTCTCTGCTCCAAT 60.035 55.000 0.00 0.00 0.00 3.16
2523 4754 1.130054 AGCCCACTTCTCTGCTCCAA 61.130 55.000 0.00 0.00 0.00 3.53
2524 4755 0.252239 TAGCCCACTTCTCTGCTCCA 60.252 55.000 0.00 0.00 35.34 3.86
2525 4756 1.127343 ATAGCCCACTTCTCTGCTCC 58.873 55.000 0.00 0.00 35.34 4.70
2526 4757 2.093235 ACAATAGCCCACTTCTCTGCTC 60.093 50.000 0.00 0.00 35.34 4.26
2527 4758 1.912043 ACAATAGCCCACTTCTCTGCT 59.088 47.619 0.00 0.00 37.84 4.24
2528 4759 2.409948 ACAATAGCCCACTTCTCTGC 57.590 50.000 0.00 0.00 0.00 4.26
2529 4760 2.421424 GCAACAATAGCCCACTTCTCTG 59.579 50.000 0.00 0.00 0.00 3.35
2530 4761 2.040278 TGCAACAATAGCCCACTTCTCT 59.960 45.455 0.00 0.00 0.00 3.10
2531 4762 2.436417 TGCAACAATAGCCCACTTCTC 58.564 47.619 0.00 0.00 0.00 2.87
2532 4763 2.584835 TGCAACAATAGCCCACTTCT 57.415 45.000 0.00 0.00 0.00 2.85
2533 4764 3.658757 TTTGCAACAATAGCCCACTTC 57.341 42.857 0.00 0.00 0.00 3.01
2534 4765 4.379652 CTTTTTGCAACAATAGCCCACTT 58.620 39.130 0.00 0.00 0.00 3.16
2535 4766 3.244181 CCTTTTTGCAACAATAGCCCACT 60.244 43.478 0.00 0.00 0.00 4.00
2536 4767 3.066380 CCTTTTTGCAACAATAGCCCAC 58.934 45.455 0.00 0.00 0.00 4.61
2537 4768 2.549778 GCCTTTTTGCAACAATAGCCCA 60.550 45.455 0.00 0.00 0.00 5.36
2538 4769 2.076100 GCCTTTTTGCAACAATAGCCC 58.924 47.619 0.00 0.00 0.00 5.19
2539 4770 2.076100 GGCCTTTTTGCAACAATAGCC 58.924 47.619 18.37 18.37 0.00 3.93
2540 4771 2.480037 GTGGCCTTTTTGCAACAATAGC 59.520 45.455 3.32 5.30 35.16 2.97
2541 4772 3.726607 TGTGGCCTTTTTGCAACAATAG 58.273 40.909 3.32 0.00 42.12 1.73
2542 4773 3.827008 TGTGGCCTTTTTGCAACAATA 57.173 38.095 3.32 0.00 42.12 1.90
2543 4774 2.706339 TGTGGCCTTTTTGCAACAAT 57.294 40.000 3.32 0.00 42.12 2.71
2545 4776 1.277557 AGTTGTGGCCTTTTTGCAACA 59.722 42.857 3.32 0.00 43.34 3.33
2546 4777 2.022764 AGTTGTGGCCTTTTTGCAAC 57.977 45.000 3.32 9.61 39.52 4.17
2547 4778 2.777832 AAGTTGTGGCCTTTTTGCAA 57.222 40.000 3.32 0.00 0.00 4.08
2548 4779 2.159028 GGTAAGTTGTGGCCTTTTTGCA 60.159 45.455 3.32 0.00 0.00 4.08
2549 4780 2.102420 AGGTAAGTTGTGGCCTTTTTGC 59.898 45.455 3.32 0.00 0.00 3.68
2550 4781 3.383185 TGAGGTAAGTTGTGGCCTTTTTG 59.617 43.478 3.32 0.00 0.00 2.44
2551 4782 3.383505 GTGAGGTAAGTTGTGGCCTTTTT 59.616 43.478 3.32 0.00 0.00 1.94
2552 4783 2.956333 GTGAGGTAAGTTGTGGCCTTTT 59.044 45.455 3.32 0.00 0.00 2.27
2553 4784 2.092103 TGTGAGGTAAGTTGTGGCCTTT 60.092 45.455 3.32 0.00 0.00 3.11
2554 4785 1.493022 TGTGAGGTAAGTTGTGGCCTT 59.507 47.619 3.32 0.00 0.00 4.35
2555 4786 1.072331 CTGTGAGGTAAGTTGTGGCCT 59.928 52.381 3.32 0.00 0.00 5.19
2556 4787 1.202770 ACTGTGAGGTAAGTTGTGGCC 60.203 52.381 0.00 0.00 0.00 5.36
2557 4788 2.143925 GACTGTGAGGTAAGTTGTGGC 58.856 52.381 0.00 0.00 0.00 5.01
2558 4789 2.223971 ACGACTGTGAGGTAAGTTGTGG 60.224 50.000 0.00 0.00 39.16 4.17
2559 4790 3.093717 ACGACTGTGAGGTAAGTTGTG 57.906 47.619 0.00 0.00 39.16 3.33
2560 4791 3.814005 AACGACTGTGAGGTAAGTTGT 57.186 42.857 0.00 0.00 41.79 3.32
2561 4792 5.117355 TCTAACGACTGTGAGGTAAGTTG 57.883 43.478 0.00 0.00 34.49 3.16
2562 4793 5.710984 CATCTAACGACTGTGAGGTAAGTT 58.289 41.667 0.00 0.00 0.00 2.66
2563 4794 4.380655 GCATCTAACGACTGTGAGGTAAGT 60.381 45.833 0.00 0.00 0.00 2.24
2564 4795 4.106197 GCATCTAACGACTGTGAGGTAAG 58.894 47.826 0.00 0.00 0.00 2.34
2565 4796 3.508402 TGCATCTAACGACTGTGAGGTAA 59.492 43.478 0.00 0.00 0.00 2.85
2566 4797 3.086282 TGCATCTAACGACTGTGAGGTA 58.914 45.455 0.00 0.00 0.00 3.08
2567 4798 1.893137 TGCATCTAACGACTGTGAGGT 59.107 47.619 0.00 0.00 0.00 3.85
2568 4799 2.164422 TCTGCATCTAACGACTGTGAGG 59.836 50.000 0.00 0.00 0.00 3.86
2569 4800 3.494045 TCTGCATCTAACGACTGTGAG 57.506 47.619 0.00 0.00 0.00 3.51
2570 4801 3.696548 AGATCTGCATCTAACGACTGTGA 59.303 43.478 0.00 0.00 37.63 3.58
2571 4802 4.039151 AGATCTGCATCTAACGACTGTG 57.961 45.455 0.00 0.00 37.63 3.66
2572 4803 5.836821 TTAGATCTGCATCTAACGACTGT 57.163 39.130 5.18 0.00 43.80 3.55
2580 4811 8.843262 CATTTTTGACCATTAGATCTGCATCTA 58.157 33.333 5.18 0.00 40.18 1.98
2581 4812 7.558807 TCATTTTTGACCATTAGATCTGCATCT 59.441 33.333 5.18 0.00 42.48 2.90
2582 4813 7.709947 TCATTTTTGACCATTAGATCTGCATC 58.290 34.615 5.18 0.00 0.00 3.91
2583 4814 7.649533 TCATTTTTGACCATTAGATCTGCAT 57.350 32.000 5.18 0.00 0.00 3.96
2584 4815 7.417003 CCATCATTTTTGACCATTAGATCTGCA 60.417 37.037 5.18 0.00 0.00 4.41
2585 4816 6.921857 CCATCATTTTTGACCATTAGATCTGC 59.078 38.462 5.18 0.00 0.00 4.26
2586 4817 6.921857 GCCATCATTTTTGACCATTAGATCTG 59.078 38.462 5.18 0.00 0.00 2.90
2587 4818 6.837568 AGCCATCATTTTTGACCATTAGATCT 59.162 34.615 0.00 0.00 0.00 2.75
2588 4819 7.047460 AGCCATCATTTTTGACCATTAGATC 57.953 36.000 0.00 0.00 0.00 2.75
2589 4820 7.232127 CCTAGCCATCATTTTTGACCATTAGAT 59.768 37.037 0.00 0.00 0.00 1.98
2590 4821 6.547141 CCTAGCCATCATTTTTGACCATTAGA 59.453 38.462 0.00 0.00 0.00 2.10
2591 4822 6.239120 CCCTAGCCATCATTTTTGACCATTAG 60.239 42.308 0.00 0.00 0.00 1.73
2592 4823 5.598005 CCCTAGCCATCATTTTTGACCATTA 59.402 40.000 0.00 0.00 0.00 1.90
2593 4824 4.406649 CCCTAGCCATCATTTTTGACCATT 59.593 41.667 0.00 0.00 0.00 3.16
2594 4825 3.962718 CCCTAGCCATCATTTTTGACCAT 59.037 43.478 0.00 0.00 0.00 3.55
2595 4826 3.364549 CCCTAGCCATCATTTTTGACCA 58.635 45.455 0.00 0.00 0.00 4.02
2596 4827 2.695147 CCCCTAGCCATCATTTTTGACC 59.305 50.000 0.00 0.00 0.00 4.02
2597 4828 3.381590 GTCCCCTAGCCATCATTTTTGAC 59.618 47.826 0.00 0.00 0.00 3.18
2598 4829 3.011144 TGTCCCCTAGCCATCATTTTTGA 59.989 43.478 0.00 0.00 0.00 2.69
2599 4830 3.131046 GTGTCCCCTAGCCATCATTTTTG 59.869 47.826 0.00 0.00 0.00 2.44
2600 4831 3.245586 TGTGTCCCCTAGCCATCATTTTT 60.246 43.478 0.00 0.00 0.00 1.94
2601 4832 2.311542 TGTGTCCCCTAGCCATCATTTT 59.688 45.455 0.00 0.00 0.00 1.82
2602 4833 1.922447 TGTGTCCCCTAGCCATCATTT 59.078 47.619 0.00 0.00 0.00 2.32
2603 4834 1.212935 GTGTGTCCCCTAGCCATCATT 59.787 52.381 0.00 0.00 0.00 2.57
2604 4835 0.839946 GTGTGTCCCCTAGCCATCAT 59.160 55.000 0.00 0.00 0.00 2.45
2605 4836 1.271840 GGTGTGTCCCCTAGCCATCA 61.272 60.000 0.00 0.00 0.00 3.07
2606 4837 1.271840 TGGTGTGTCCCCTAGCCATC 61.272 60.000 0.00 0.00 34.77 3.51
2607 4838 0.624500 ATGGTGTGTCCCCTAGCCAT 60.625 55.000 0.00 0.00 34.77 4.40
2608 4839 1.229820 ATGGTGTGTCCCCTAGCCA 60.230 57.895 0.00 0.00 34.77 4.75
2609 4840 1.271840 TGATGGTGTGTCCCCTAGCC 61.272 60.000 0.00 0.00 34.77 3.93
2610 4841 0.839946 ATGATGGTGTGTCCCCTAGC 59.160 55.000 0.00 0.00 34.77 3.42
2611 4842 2.118679 TGATGATGGTGTGTCCCCTAG 58.881 52.381 0.00 0.00 34.77 3.02
2612 4843 1.837439 GTGATGATGGTGTGTCCCCTA 59.163 52.381 0.00 0.00 34.77 3.53
2613 4844 0.620556 GTGATGATGGTGTGTCCCCT 59.379 55.000 0.00 0.00 34.77 4.79
2614 4845 0.394352 GGTGATGATGGTGTGTCCCC 60.394 60.000 0.00 0.00 34.77 4.81
2615 4846 0.327924 TGGTGATGATGGTGTGTCCC 59.672 55.000 0.00 0.00 34.77 4.46
2616 4847 1.812571 GTTGGTGATGATGGTGTGTCC 59.187 52.381 0.00 0.00 0.00 4.02
2617 4848 2.485426 CAGTTGGTGATGATGGTGTGTC 59.515 50.000 0.00 0.00 0.00 3.67
2618 4849 2.106338 TCAGTTGGTGATGATGGTGTGT 59.894 45.455 0.00 0.00 0.00 3.72
2619 4850 2.745821 CTCAGTTGGTGATGATGGTGTG 59.254 50.000 0.00 0.00 33.51 3.82
2620 4851 2.373169 ACTCAGTTGGTGATGATGGTGT 59.627 45.455 0.00 0.00 33.51 4.16
2621 4852 3.005554 GACTCAGTTGGTGATGATGGTG 58.994 50.000 0.00 0.00 33.51 4.17
2622 4853 2.909006 AGACTCAGTTGGTGATGATGGT 59.091 45.455 0.00 0.00 33.51 3.55
2623 4854 3.623906 AGACTCAGTTGGTGATGATGG 57.376 47.619 0.00 0.00 33.51 3.51
2624 4855 5.954296 AAAAGACTCAGTTGGTGATGATG 57.046 39.130 0.00 0.00 33.51 3.07
2625 4856 7.989741 CCTATAAAAGACTCAGTTGGTGATGAT 59.010 37.037 0.00 0.00 33.51 2.45
2626 4857 7.180229 TCCTATAAAAGACTCAGTTGGTGATGA 59.820 37.037 0.00 0.00 33.51 2.92
2627 4858 7.331026 TCCTATAAAAGACTCAGTTGGTGATG 58.669 38.462 0.00 0.00 33.51 3.07
2628 4859 7.181125 ACTCCTATAAAAGACTCAGTTGGTGAT 59.819 37.037 0.00 0.00 33.51 3.06
2629 4860 6.497259 ACTCCTATAAAAGACTCAGTTGGTGA 59.503 38.462 0.00 0.00 0.00 4.02
2630 4861 6.702329 ACTCCTATAAAAGACTCAGTTGGTG 58.298 40.000 0.00 0.00 0.00 4.17
2631 4862 6.936968 ACTCCTATAAAAGACTCAGTTGGT 57.063 37.500 0.00 0.00 0.00 3.67
2661 4892 9.427821 AAGTTCAGTGGACACTTCTATATCTAT 57.572 33.333 3.90 0.00 40.20 1.98
2662 4893 8.824756 AAGTTCAGTGGACACTTCTATATCTA 57.175 34.615 3.90 0.00 40.20 1.98
2663 4894 7.726033 AAGTTCAGTGGACACTTCTATATCT 57.274 36.000 3.90 0.00 40.20 1.98
2664 4895 8.254508 AGAAAGTTCAGTGGACACTTCTATATC 58.745 37.037 14.34 4.97 40.20 1.63
2665 4896 8.037758 CAGAAAGTTCAGTGGACACTTCTATAT 58.962 37.037 15.15 0.00 40.20 0.86
2666 4897 7.232737 TCAGAAAGTTCAGTGGACACTTCTATA 59.767 37.037 15.15 7.26 40.20 1.31
2667 4898 6.042093 TCAGAAAGTTCAGTGGACACTTCTAT 59.958 38.462 15.15 0.00 40.20 1.98
2668 4899 5.362717 TCAGAAAGTTCAGTGGACACTTCTA 59.637 40.000 15.15 5.59 40.20 2.10
2669 4900 4.162320 TCAGAAAGTTCAGTGGACACTTCT 59.838 41.667 11.40 11.40 40.20 2.85
2670 4901 4.442706 TCAGAAAGTTCAGTGGACACTTC 58.557 43.478 3.90 6.34 40.20 3.01
2671 4902 4.487714 TCAGAAAGTTCAGTGGACACTT 57.512 40.909 3.90 1.11 40.20 3.16
2672 4903 4.696479 ATCAGAAAGTTCAGTGGACACT 57.304 40.909 3.90 0.00 43.61 3.55
2673 4904 5.529060 AGAAATCAGAAAGTTCAGTGGACAC 59.471 40.000 3.90 0.00 0.00 3.67
2674 4905 5.528690 CAGAAATCAGAAAGTTCAGTGGACA 59.471 40.000 3.90 0.00 0.00 4.02
2675 4906 5.561725 GCAGAAATCAGAAAGTTCAGTGGAC 60.562 44.000 0.00 0.00 0.00 4.02
2676 4907 4.516698 GCAGAAATCAGAAAGTTCAGTGGA 59.483 41.667 0.00 0.00 0.00 4.02
2677 4908 4.276678 TGCAGAAATCAGAAAGTTCAGTGG 59.723 41.667 0.00 0.00 0.00 4.00
2678 4909 5.428496 TGCAGAAATCAGAAAGTTCAGTG 57.572 39.130 0.00 0.00 0.00 3.66
2679 4910 5.591877 AGTTGCAGAAATCAGAAAGTTCAGT 59.408 36.000 0.00 0.00 0.00 3.41
2680 4911 6.069684 AGTTGCAGAAATCAGAAAGTTCAG 57.930 37.500 0.00 0.00 0.00 3.02
2681 4912 5.589855 TGAGTTGCAGAAATCAGAAAGTTCA 59.410 36.000 0.00 0.00 31.36 3.18
2682 4913 6.064846 TGAGTTGCAGAAATCAGAAAGTTC 57.935 37.500 0.00 0.00 31.36 3.01
2683 4914 6.489361 AGATGAGTTGCAGAAATCAGAAAGTT 59.511 34.615 0.00 0.00 39.41 2.66
2684 4915 6.002704 AGATGAGTTGCAGAAATCAGAAAGT 58.997 36.000 0.00 0.00 39.41 2.66
2685 4916 6.497785 AGATGAGTTGCAGAAATCAGAAAG 57.502 37.500 0.00 0.00 39.41 2.62
2686 4917 6.889301 AAGATGAGTTGCAGAAATCAGAAA 57.111 33.333 0.00 0.00 39.41 2.52
2687 4918 6.889301 AAAGATGAGTTGCAGAAATCAGAA 57.111 33.333 0.00 0.00 39.41 3.02
2688 4919 7.164122 ACTAAAGATGAGTTGCAGAAATCAGA 58.836 34.615 0.00 0.00 39.41 3.27
2689 4920 7.375106 ACTAAAGATGAGTTGCAGAAATCAG 57.625 36.000 0.00 0.00 39.41 2.90
2690 4921 8.097038 AGTACTAAAGATGAGTTGCAGAAATCA 58.903 33.333 0.00 0.00 40.28 2.57
2691 4922 8.485976 AGTACTAAAGATGAGTTGCAGAAATC 57.514 34.615 0.00 0.00 0.00 2.17
2692 4923 7.550906 GGAGTACTAAAGATGAGTTGCAGAAAT 59.449 37.037 0.00 0.00 0.00 2.17
2693 4924 6.874134 GGAGTACTAAAGATGAGTTGCAGAAA 59.126 38.462 0.00 0.00 0.00 2.52
2694 4925 6.014584 TGGAGTACTAAAGATGAGTTGCAGAA 60.015 38.462 0.00 0.00 0.00 3.02
2695 4926 5.480422 TGGAGTACTAAAGATGAGTTGCAGA 59.520 40.000 0.00 0.00 0.00 4.26
2696 4927 5.578727 GTGGAGTACTAAAGATGAGTTGCAG 59.421 44.000 0.00 0.00 0.00 4.41
2697 4928 5.246203 AGTGGAGTACTAAAGATGAGTTGCA 59.754 40.000 0.00 0.00 38.04 4.08
2698 4929 5.578727 CAGTGGAGTACTAAAGATGAGTTGC 59.421 44.000 0.00 0.00 37.60 4.17
2699 4930 5.578727 GCAGTGGAGTACTAAAGATGAGTTG 59.421 44.000 0.00 0.00 37.60 3.16
2700 4931 5.482175 AGCAGTGGAGTACTAAAGATGAGTT 59.518 40.000 0.00 0.00 37.60 3.01
2701 4932 5.020132 AGCAGTGGAGTACTAAAGATGAGT 58.980 41.667 0.00 0.00 37.60 3.41
2702 4933 5.590530 AGCAGTGGAGTACTAAAGATGAG 57.409 43.478 0.00 0.00 37.60 2.90
2703 4934 6.040955 CCATAGCAGTGGAGTACTAAAGATGA 59.959 42.308 0.00 0.00 42.02 2.92
2704 4935 6.183360 ACCATAGCAGTGGAGTACTAAAGATG 60.183 42.308 13.63 0.00 42.02 2.90
2705 4936 5.900123 ACCATAGCAGTGGAGTACTAAAGAT 59.100 40.000 13.63 0.00 42.02 2.40
2706 4937 5.269991 ACCATAGCAGTGGAGTACTAAAGA 58.730 41.667 13.63 0.00 42.02 2.52
2707 4938 5.599999 ACCATAGCAGTGGAGTACTAAAG 57.400 43.478 13.63 0.00 42.02 1.85
2708 4939 6.368779 AAACCATAGCAGTGGAGTACTAAA 57.631 37.500 13.63 0.00 42.02 1.85
2709 4940 6.666546 ACTAAACCATAGCAGTGGAGTACTAA 59.333 38.462 13.63 0.00 42.02 2.24
2710 4941 6.192773 ACTAAACCATAGCAGTGGAGTACTA 58.807 40.000 13.63 0.00 42.02 1.82
2711 4942 5.024118 ACTAAACCATAGCAGTGGAGTACT 58.976 41.667 13.63 0.00 42.02 2.73
2712 4943 5.340439 ACTAAACCATAGCAGTGGAGTAC 57.660 43.478 13.63 0.00 42.02 2.73
2713 4944 7.469594 CGATTACTAAACCATAGCAGTGGAGTA 60.470 40.741 13.63 8.36 42.02 2.59
2714 4945 6.561519 ATTACTAAACCATAGCAGTGGAGT 57.438 37.500 13.63 9.20 42.02 3.85
2715 4946 5.692204 CGATTACTAAACCATAGCAGTGGAG 59.308 44.000 13.63 4.19 42.02 3.86
2716 4947 5.361571 TCGATTACTAAACCATAGCAGTGGA 59.638 40.000 13.63 0.00 42.02 4.02
2717 4948 5.597806 TCGATTACTAAACCATAGCAGTGG 58.402 41.667 5.90 5.90 45.04 4.00
2718 4949 6.923508 TCATCGATTACTAAACCATAGCAGTG 59.076 38.462 0.00 0.00 0.00 3.66
2719 4950 7.050970 TCATCGATTACTAAACCATAGCAGT 57.949 36.000 0.00 0.00 0.00 4.40
2720 4951 7.946655 TTCATCGATTACTAAACCATAGCAG 57.053 36.000 0.00 0.00 0.00 4.24
2721 4952 7.042051 GCTTTCATCGATTACTAAACCATAGCA 60.042 37.037 0.00 0.00 0.00 3.49
2722 4953 7.042051 TGCTTTCATCGATTACTAAACCATAGC 60.042 37.037 0.00 0.00 0.00 2.97
2723 4954 8.276325 GTGCTTTCATCGATTACTAAACCATAG 58.724 37.037 0.00 0.00 0.00 2.23
2724 4955 7.985184 AGTGCTTTCATCGATTACTAAACCATA 59.015 33.333 0.00 0.00 0.00 2.74
2725 4956 6.823689 AGTGCTTTCATCGATTACTAAACCAT 59.176 34.615 0.00 0.00 0.00 3.55
2726 4957 6.170506 AGTGCTTTCATCGATTACTAAACCA 58.829 36.000 0.00 0.00 0.00 3.67
2727 4958 6.663944 AGTGCTTTCATCGATTACTAAACC 57.336 37.500 0.00 0.00 0.00 3.27
2728 4959 9.690434 CTTTAGTGCTTTCATCGATTACTAAAC 57.310 33.333 0.00 0.00 35.46 2.01
2729 4960 9.431887 ACTTTAGTGCTTTCATCGATTACTAAA 57.568 29.630 0.00 9.21 37.02 1.85
2730 4961 8.997621 ACTTTAGTGCTTTCATCGATTACTAA 57.002 30.769 0.00 2.18 0.00 2.24
2731 4962 8.997621 AACTTTAGTGCTTTCATCGATTACTA 57.002 30.769 0.00 0.00 0.00 1.82
2732 4963 7.819900 AGAACTTTAGTGCTTTCATCGATTACT 59.180 33.333 0.00 0.00 26.38 2.24
2733 4964 7.900352 CAGAACTTTAGTGCTTTCATCGATTAC 59.100 37.037 0.00 0.00 29.47 1.89
2734 4965 7.413000 GCAGAACTTTAGTGCTTTCATCGATTA 60.413 37.037 0.00 0.00 29.47 1.75
2735 4966 6.621596 GCAGAACTTTAGTGCTTTCATCGATT 60.622 38.462 0.00 0.00 29.47 3.34
2736 4967 5.163814 GCAGAACTTTAGTGCTTTCATCGAT 60.164 40.000 0.00 0.00 29.47 3.59
2737 4968 4.152402 GCAGAACTTTAGTGCTTTCATCGA 59.848 41.667 0.00 0.00 29.47 3.59
2738 4969 4.083855 TGCAGAACTTTAGTGCTTTCATCG 60.084 41.667 0.00 0.00 38.09 3.84
2739 4970 5.180117 TCTGCAGAACTTTAGTGCTTTCATC 59.820 40.000 15.67 0.00 38.09 2.92
2740 4971 5.065914 TCTGCAGAACTTTAGTGCTTTCAT 58.934 37.500 15.67 0.00 38.09 2.57
2741 4972 4.450976 TCTGCAGAACTTTAGTGCTTTCA 58.549 39.130 15.67 0.00 38.09 2.69
2742 4973 5.049129 ACATCTGCAGAACTTTAGTGCTTTC 60.049 40.000 22.50 0.00 38.09 2.62
2743 4974 4.823989 ACATCTGCAGAACTTTAGTGCTTT 59.176 37.500 22.50 0.00 38.09 3.51
2744 4975 4.392940 ACATCTGCAGAACTTTAGTGCTT 58.607 39.130 22.50 0.00 38.09 3.91
2745 4976 4.013267 ACATCTGCAGAACTTTAGTGCT 57.987 40.909 22.50 0.00 38.09 4.40
2746 4977 5.276584 CGATACATCTGCAGAACTTTAGTGC 60.277 44.000 22.50 8.38 37.73 4.40
2747 4978 5.807520 ACGATACATCTGCAGAACTTTAGTG 59.192 40.000 22.50 14.82 0.00 2.74
2748 4979 5.967088 ACGATACATCTGCAGAACTTTAGT 58.033 37.500 22.50 14.13 0.00 2.24
2749 4980 6.893958 AACGATACATCTGCAGAACTTTAG 57.106 37.500 22.50 13.49 0.00 1.85
2750 4981 8.942338 AATAACGATACATCTGCAGAACTTTA 57.058 30.769 22.50 13.14 0.00 1.85
2751 4982 7.849804 AATAACGATACATCTGCAGAACTTT 57.150 32.000 22.50 6.40 0.00 2.66
2752 4983 9.547753 AATAATAACGATACATCTGCAGAACTT 57.452 29.630 22.50 10.32 0.00 2.66
2870 5101 6.908825 TCATTTTGACACCAGTAAAGTATGC 58.091 36.000 0.00 0.00 0.00 3.14
2899 5130 1.461127 GAAGCATCCAGTGACGTGAAC 59.539 52.381 0.00 0.00 0.00 3.18
2916 5147 7.856145 AGAGAAACTACATATGCCTTTGAAG 57.144 36.000 1.58 0.00 0.00 3.02
2991 5222 3.620488 TCACCTGAAGAGCAGTGTTTTT 58.380 40.909 0.00 0.00 43.33 1.94
3071 5302 3.119849 CGCAACAATCTTTTGGACCCTAG 60.120 47.826 0.00 0.00 37.15 3.02
3128 5359 3.375922 TGTTTCTCGGTTGGAAGTTTGTC 59.624 43.478 0.00 0.00 0.00 3.18
3137 5368 1.524008 GCCCCTTGTTTCTCGGTTGG 61.524 60.000 0.00 0.00 0.00 3.77
3138 5369 0.821711 TGCCCCTTGTTTCTCGGTTG 60.822 55.000 0.00 0.00 0.00 3.77
3141 5372 1.339631 TGTATGCCCCTTGTTTCTCGG 60.340 52.381 0.00 0.00 0.00 4.63
3142 5373 2.009774 CTGTATGCCCCTTGTTTCTCG 58.990 52.381 0.00 0.00 0.00 4.04
3143 5374 3.010420 GTCTGTATGCCCCTTGTTTCTC 58.990 50.000 0.00 0.00 0.00 2.87
3155 5386 4.870363 ACAATGTTTTGGTGTCTGTATGC 58.130 39.130 0.00 0.00 37.15 3.14
3159 5390 5.359576 ACATGTACAATGTTTTGGTGTCTGT 59.640 36.000 0.00 0.00 37.15 3.41
3162 5393 7.865385 ACAATACATGTACAATGTTTTGGTGTC 59.135 33.333 25.76 0.00 41.76 3.67
3163 5394 7.721402 ACAATACATGTACAATGTTTTGGTGT 58.279 30.769 25.76 16.30 41.76 4.16
3171 5402 7.083858 GCTCACAAACAATACATGTACAATGT 58.916 34.615 7.96 10.87 42.99 2.71
3178 5409 9.709495 AATAAAATGCTCACAAACAATACATGT 57.291 25.926 2.69 2.69 46.82 3.21
3209 5440 7.444183 CGGGGAGATTAATACACAACAATGTAT 59.556 37.037 0.00 0.00 45.69 2.29
3210 5441 6.764085 CGGGGAGATTAATACACAACAATGTA 59.236 38.462 0.00 0.00 37.82 2.29
3212 5443 5.588648 ACGGGGAGATTAATACACAACAATG 59.411 40.000 0.00 0.00 0.00 2.82
3213 5444 5.751586 ACGGGGAGATTAATACACAACAAT 58.248 37.500 0.00 0.00 0.00 2.71
3214 5445 5.168647 ACGGGGAGATTAATACACAACAA 57.831 39.130 0.00 0.00 0.00 2.83
3215 5446 4.829872 ACGGGGAGATTAATACACAACA 57.170 40.909 0.00 0.00 0.00 3.33
3226 5462 1.985895 AGAGGAACAAACGGGGAGATT 59.014 47.619 0.00 0.00 0.00 2.40
3229 5465 0.321653 CCAGAGGAACAAACGGGGAG 60.322 60.000 0.00 0.00 0.00 4.30
3250 5486 3.311871 CCAACAGAATGCAGATCTAGCAC 59.688 47.826 18.13 9.61 45.95 4.40
3485 5721 6.652481 CAGCATCTAAACAGAAAGAGGAAAGA 59.348 38.462 0.00 0.00 0.00 2.52
3538 5774 6.211986 ACATGATGTGAGGGAATTGTCAAATT 59.788 34.615 0.00 0.00 38.74 1.82
3539 5775 5.718130 ACATGATGTGAGGGAATTGTCAAAT 59.282 36.000 0.00 0.00 0.00 2.32
3555 5791 3.376234 CGAATCAAGGCTGAACATGATGT 59.624 43.478 0.00 0.00 34.49 3.06
3714 5950 1.066573 GTCTGTCACAGGCATGCTAGT 60.067 52.381 18.92 13.48 35.96 2.57
3786 6022 0.734889 AGCAATCGGAATGGCTTTCG 59.265 50.000 6.99 0.00 39.24 3.46
3810 6046 1.570813 GAAACCCAAGCTGTGCAAAC 58.429 50.000 0.00 0.00 0.00 2.93
3834 6070 4.133820 TGGATACCAAACGCATCATAAGG 58.866 43.478 0.00 0.00 0.00 2.69
3882 6118 4.079827 AGCAGGCCTCCTAATGCT 57.920 55.556 0.00 5.48 43.92 3.79
4047 6283 5.801350 AACATGTAATCCACAATGAGTCG 57.199 39.130 0.00 0.00 41.55 4.18
4074 6310 1.021390 GGTGAAGTGTGGATGGCTCG 61.021 60.000 0.00 0.00 0.00 5.03
4386 6631 8.328864 GGATTATTGACTCGAATTACACACTTC 58.671 37.037 0.00 0.00 0.00 3.01
4474 6719 1.341531 ACACATACTCGAGCATAGGGC 59.658 52.381 13.61 0.00 45.30 5.19
5079 7803 2.436469 CCTGTACCAGCGCATGCA 60.436 61.111 19.57 3.32 46.23 3.96
5096 7820 4.144703 GTCGAGACCGGGAAGGCC 62.145 72.222 6.32 0.00 46.52 5.19
5129 7853 1.598130 GGCCGTTCTGACAGCTTGT 60.598 57.895 0.00 0.00 29.86 3.16
5147 7871 1.663702 GGACCACCTGACGTTCACG 60.664 63.158 0.00 0.00 46.33 4.35
5181 7905 1.667154 CTCTTCGACCGGATGCTGGA 61.667 60.000 9.46 0.00 33.36 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.