Multiple sequence alignment - TraesCS4B01G207600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G207600 chr4B 100.000 5449 0 0 1 5449 443455743 443450295 0.000000e+00 10063.0
1 TraesCS4B01G207600 chr4B 95.968 248 10 0 1 248 443474312 443474065 2.360000e-108 403.0
2 TraesCS4B01G207600 chr4B 97.436 39 0 1 249 286 182943464 182943426 1.270000e-06 65.8
3 TraesCS4B01G207600 chr4D 95.006 2443 64 19 1320 3729 359125486 359123069 0.000000e+00 3783.0
4 TraesCS4B01G207600 chr4D 94.318 1232 47 9 3727 4936 359123013 359121783 0.000000e+00 1866.0
5 TraesCS4B01G207600 chr4D 96.628 682 12 2 640 1321 359126317 359125647 0.000000e+00 1122.0
6 TraesCS4B01G207600 chr4D 94.141 256 13 2 5196 5449 359121785 359121530 6.620000e-104 388.0
7 TraesCS4B01G207600 chr4D 82.571 350 19 26 291 607 359126752 359126412 2.500000e-68 270.0
8 TraesCS4B01G207600 chr4D 97.436 39 0 1 249 286 200970714 200970752 1.270000e-06 65.8
9 TraesCS4B01G207600 chr4D 94.737 38 0 2 250 286 35777517 35777553 2.120000e-04 58.4
10 TraesCS4B01G207600 chr4D 94.737 38 0 2 250 286 35795515 35795551 2.120000e-04 58.4
11 TraesCS4B01G207600 chr4A 89.254 1247 75 30 3727 4936 106341495 106342719 0.000000e+00 1506.0
12 TraesCS4B01G207600 chr4A 88.314 1121 67 27 637 1725 106338745 106339833 0.000000e+00 1286.0
13 TraesCS4B01G207600 chr4A 94.277 629 26 4 1797 2417 106339843 106340469 0.000000e+00 953.0
14 TraesCS4B01G207600 chr4A 90.000 530 25 9 2370 2873 106340469 106340996 0.000000e+00 660.0
15 TraesCS4B01G207600 chr4A 83.964 449 35 15 638 1077 106191156 106191576 3.960000e-106 396.0
16 TraesCS4B01G207600 chr4A 93.385 257 12 3 5196 5449 106342717 106342971 5.150000e-100 375.0
17 TraesCS4B01G207600 chr4A 78.068 383 47 7 3349 3729 106341091 106341438 1.990000e-49 207.0
18 TraesCS4B01G207600 chr7B 98.168 273 5 0 4933 5205 525026497 525026225 1.370000e-130 477.0
19 TraesCS4B01G207600 chr2B 95.556 270 11 1 4928 5197 436235938 436235670 1.080000e-116 431.0
20 TraesCS4B01G207600 chr2B 95.686 255 11 0 1 255 447253181 447252927 1.410000e-110 411.0
21 TraesCS4B01G207600 chr3B 95.094 265 13 0 4933 5197 581664953 581665217 8.440000e-113 418.0
22 TraesCS4B01G207600 chr3B 95.984 249 10 0 1 249 462197993 462198241 6.570000e-109 405.0
23 TraesCS4B01G207600 chr3B 96.680 241 8 0 8 248 284476946 284476706 8.500000e-108 401.0
24 TraesCS4B01G207600 chr3B 95.582 249 11 0 1 249 462137906 462138154 3.060000e-107 399.0
25 TraesCS4B01G207600 chr3B 95.200 250 11 1 7 255 256573914 256573665 1.420000e-105 394.0
26 TraesCS4B01G207600 chr3B 95.238 42 0 2 246 286 91848546 91848506 1.270000e-06 65.8
27 TraesCS4B01G207600 chr2A 94.717 265 14 0 4933 5197 492520299 492520035 3.930000e-111 412.0
28 TraesCS4B01G207600 chr2A 95.122 41 2 0 3414 3454 770404918 770404958 1.270000e-06 65.8
29 TraesCS4B01G207600 chr2A 91.489 47 2 2 242 286 398156072 398156118 4.560000e-06 63.9
30 TraesCS4B01G207600 chr2A 91.489 47 2 2 242 286 399134828 399134782 4.560000e-06 63.9
31 TraesCS4B01G207600 chr6B 96.371 248 9 0 5 252 296732593 296732840 5.080000e-110 409.0
32 TraesCS4B01G207600 chr6B 95.968 248 10 0 1 248 257136921 257136674 2.360000e-108 403.0
33 TraesCS4B01G207600 chr6B 95.582 249 11 0 1 249 546165040 546165288 3.060000e-107 399.0
34 TraesCS4B01G207600 chr3D 93.939 264 14 2 4934 5197 461592289 461592028 1.100000e-106 398.0
35 TraesCS4B01G207600 chr3D 92.222 270 20 1 4928 5197 346865207 346865475 1.110000e-101 381.0
36 TraesCS4B01G207600 chr3D 92.803 264 18 1 4934 5197 494599192 494598930 1.110000e-101 381.0
37 TraesCS4B01G207600 chr3D 92.164 268 17 4 4931 5197 51106610 51106874 5.150000e-100 375.0
38 TraesCS4B01G207600 chr5D 92.424 264 19 1 4934 5197 60522757 60522495 5.150000e-100 375.0
39 TraesCS4B01G207600 chr7D 82.197 264 41 5 3369 3631 94403066 94403324 7.100000e-54 222.0
40 TraesCS4B01G207600 chr5A 87.037 54 2 5 234 286 206579011 206578962 7.620000e-04 56.5
41 TraesCS4B01G207600 chr1A 86.792 53 3 3 234 286 263750158 263750206 7.620000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G207600 chr4B 443450295 443455743 5448 True 10063.000000 10063 100.0000 1 5449 1 chr4B.!!$R2 5448
1 TraesCS4B01G207600 chr4D 359121530 359126752 5222 True 1485.800000 3783 92.5328 291 5449 5 chr4D.!!$R1 5158
2 TraesCS4B01G207600 chr4A 106338745 106342971 4226 False 831.166667 1506 88.8830 637 5449 6 chr4A.!!$F2 4812

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
285 286 0.031314 CCTGGTCTCGATCGTCATGG 59.969 60.0 15.94 7.51 0.00 3.66 F
286 287 0.031314 CTGGTCTCGATCGTCATGGG 59.969 60.0 15.94 0.00 0.00 4.00 F
1008 1148 0.248417 CTGAGACTCGGATGCTGTCG 60.248 60.0 5.24 0.00 36.01 4.35 F
2162 2476 1.159285 TTGAAGCAAGGCACGATGAG 58.841 50.0 0.00 0.00 0.00 2.90 F
3256 3661 0.670546 CTGGACGACATTGAAGCGGT 60.671 55.0 0.00 0.00 0.00 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1518 1832 1.004044 AGTGATGCAACTGGGAAGAGG 59.996 52.381 0.00 0.00 0.00 3.69 R
2025 2339 2.054799 ACCCTCAGCACTTTGACCTAA 58.945 47.619 0.00 0.00 0.00 2.69 R
2940 3335 2.180769 GTTTGCGGGAATTCGGGC 59.819 61.111 11.25 11.25 0.00 6.13 R
3732 4139 0.106719 ATCCACCATAAGTTGCGGGG 60.107 55.000 0.00 0.00 0.00 5.73 R
4939 5443 0.179145 ACACTTATTCGCGGACGGAG 60.179 55.000 6.13 0.00 40.63 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 6.684897 AATTCCAAAAGGATGTTTCATGGA 57.315 33.333 0.00 0.00 33.88 3.41
41 42 5.726980 TTCCAAAAGGATGTTTCATGGAG 57.273 39.130 0.00 0.00 36.87 3.86
42 43 4.739793 TCCAAAAGGATGTTTCATGGAGT 58.260 39.130 0.00 0.00 32.10 3.85
43 44 5.147032 TCCAAAAGGATGTTTCATGGAGTT 58.853 37.500 0.00 0.00 32.10 3.01
44 45 5.602145 TCCAAAAGGATGTTTCATGGAGTTT 59.398 36.000 0.00 0.00 32.10 2.66
45 46 5.697633 CCAAAAGGATGTTTCATGGAGTTTG 59.302 40.000 0.00 0.00 0.00 2.93
46 47 6.462768 CCAAAAGGATGTTTCATGGAGTTTGA 60.463 38.462 0.00 0.00 0.00 2.69
47 48 5.972107 AAGGATGTTTCATGGAGTTTGAG 57.028 39.130 0.00 0.00 0.00 3.02
48 49 4.338879 AGGATGTTTCATGGAGTTTGAGG 58.661 43.478 0.00 0.00 0.00 3.86
49 50 4.043310 AGGATGTTTCATGGAGTTTGAGGA 59.957 41.667 0.00 0.00 0.00 3.71
50 51 4.156739 GGATGTTTCATGGAGTTTGAGGAC 59.843 45.833 0.00 0.00 0.00 3.85
51 52 4.437682 TGTTTCATGGAGTTTGAGGACT 57.562 40.909 0.00 0.00 0.00 3.85
52 53 4.792068 TGTTTCATGGAGTTTGAGGACTT 58.208 39.130 0.00 0.00 0.00 3.01
53 54 5.200483 TGTTTCATGGAGTTTGAGGACTTT 58.800 37.500 0.00 0.00 0.00 2.66
54 55 5.656416 TGTTTCATGGAGTTTGAGGACTTTT 59.344 36.000 0.00 0.00 0.00 2.27
55 56 5.772825 TTCATGGAGTTTGAGGACTTTTG 57.227 39.130 0.00 0.00 0.00 2.44
56 57 4.144297 TCATGGAGTTTGAGGACTTTTGG 58.856 43.478 0.00 0.00 0.00 3.28
57 58 3.943671 TGGAGTTTGAGGACTTTTGGA 57.056 42.857 0.00 0.00 0.00 3.53
58 59 3.820557 TGGAGTTTGAGGACTTTTGGAG 58.179 45.455 0.00 0.00 0.00 3.86
59 60 2.554462 GGAGTTTGAGGACTTTTGGAGC 59.446 50.000 0.00 0.00 0.00 4.70
60 61 3.481453 GAGTTTGAGGACTTTTGGAGCT 58.519 45.455 0.00 0.00 0.00 4.09
61 62 3.217626 AGTTTGAGGACTTTTGGAGCTG 58.782 45.455 0.00 0.00 0.00 4.24
62 63 2.952310 GTTTGAGGACTTTTGGAGCTGT 59.048 45.455 0.00 0.00 0.00 4.40
63 64 2.260844 TGAGGACTTTTGGAGCTGTG 57.739 50.000 0.00 0.00 0.00 3.66
64 65 1.490490 TGAGGACTTTTGGAGCTGTGT 59.510 47.619 0.00 0.00 0.00 3.72
65 66 2.703536 TGAGGACTTTTGGAGCTGTGTA 59.296 45.455 0.00 0.00 0.00 2.90
66 67 3.244215 TGAGGACTTTTGGAGCTGTGTAG 60.244 47.826 0.00 0.00 0.00 2.74
67 68 2.972713 AGGACTTTTGGAGCTGTGTAGA 59.027 45.455 0.00 0.00 0.00 2.59
68 69 3.391296 AGGACTTTTGGAGCTGTGTAGAA 59.609 43.478 0.00 0.00 0.00 2.10
69 70 4.042187 AGGACTTTTGGAGCTGTGTAGAAT 59.958 41.667 0.00 0.00 0.00 2.40
70 71 5.248477 AGGACTTTTGGAGCTGTGTAGAATA 59.752 40.000 0.00 0.00 0.00 1.75
71 72 6.069963 AGGACTTTTGGAGCTGTGTAGAATAT 60.070 38.462 0.00 0.00 0.00 1.28
72 73 6.037610 GGACTTTTGGAGCTGTGTAGAATATG 59.962 42.308 0.00 0.00 0.00 1.78
73 74 6.476378 ACTTTTGGAGCTGTGTAGAATATGT 58.524 36.000 0.00 0.00 0.00 2.29
74 75 6.942576 ACTTTTGGAGCTGTGTAGAATATGTT 59.057 34.615 0.00 0.00 0.00 2.71
75 76 7.448469 ACTTTTGGAGCTGTGTAGAATATGTTT 59.552 33.333 0.00 0.00 0.00 2.83
76 77 6.985188 TTGGAGCTGTGTAGAATATGTTTC 57.015 37.500 0.00 0.00 0.00 2.78
77 78 5.428253 TGGAGCTGTGTAGAATATGTTTCC 58.572 41.667 0.00 0.00 0.00 3.13
78 79 5.045942 TGGAGCTGTGTAGAATATGTTTCCA 60.046 40.000 0.00 0.00 0.00 3.53
79 80 5.880332 GGAGCTGTGTAGAATATGTTTCCAA 59.120 40.000 0.00 0.00 0.00 3.53
80 81 6.543831 GGAGCTGTGTAGAATATGTTTCCAAT 59.456 38.462 0.00 0.00 0.00 3.16
81 82 7.325660 AGCTGTGTAGAATATGTTTCCAATG 57.674 36.000 0.00 0.00 0.00 2.82
82 83 6.886459 AGCTGTGTAGAATATGTTTCCAATGT 59.114 34.615 0.00 0.00 0.00 2.71
83 84 7.394359 AGCTGTGTAGAATATGTTTCCAATGTT 59.606 33.333 0.00 0.00 0.00 2.71
84 85 8.028938 GCTGTGTAGAATATGTTTCCAATGTTT 58.971 33.333 0.00 0.00 0.00 2.83
85 86 9.345517 CTGTGTAGAATATGTTTCCAATGTTTG 57.654 33.333 0.00 0.00 0.00 2.93
86 87 7.812191 TGTGTAGAATATGTTTCCAATGTTTGC 59.188 33.333 0.00 0.00 0.00 3.68
87 88 8.028938 GTGTAGAATATGTTTCCAATGTTTGCT 58.971 33.333 0.00 0.00 0.00 3.91
88 89 8.243426 TGTAGAATATGTTTCCAATGTTTGCTC 58.757 33.333 0.00 0.00 0.00 4.26
89 90 7.472334 AGAATATGTTTCCAATGTTTGCTCT 57.528 32.000 0.00 0.00 0.00 4.09
90 91 7.899973 AGAATATGTTTCCAATGTTTGCTCTT 58.100 30.769 0.00 0.00 0.00 2.85
91 92 8.370182 AGAATATGTTTCCAATGTTTGCTCTTT 58.630 29.630 0.00 0.00 0.00 2.52
92 93 8.907222 AATATGTTTCCAATGTTTGCTCTTTT 57.093 26.923 0.00 0.00 0.00 2.27
93 94 8.907222 ATATGTTTCCAATGTTTGCTCTTTTT 57.093 26.923 0.00 0.00 0.00 1.94
94 95 6.660887 TGTTTCCAATGTTTGCTCTTTTTC 57.339 33.333 0.00 0.00 0.00 2.29
95 96 5.584251 TGTTTCCAATGTTTGCTCTTTTTCC 59.416 36.000 0.00 0.00 0.00 3.13
96 97 5.350504 TTCCAATGTTTGCTCTTTTTCCA 57.649 34.783 0.00 0.00 0.00 3.53
97 98 4.947645 TCCAATGTTTGCTCTTTTTCCAG 58.052 39.130 0.00 0.00 0.00 3.86
98 99 3.495753 CCAATGTTTGCTCTTTTTCCAGC 59.504 43.478 0.00 0.00 36.08 4.85
99 100 2.888834 TGTTTGCTCTTTTTCCAGCC 57.111 45.000 0.00 0.00 34.47 4.85
100 101 2.106566 TGTTTGCTCTTTTTCCAGCCA 58.893 42.857 0.00 0.00 34.47 4.75
101 102 2.101249 TGTTTGCTCTTTTTCCAGCCAG 59.899 45.455 0.00 0.00 34.47 4.85
102 103 2.362077 GTTTGCTCTTTTTCCAGCCAGA 59.638 45.455 0.00 0.00 34.47 3.86
103 104 2.363306 TGCTCTTTTTCCAGCCAGAA 57.637 45.000 0.00 0.00 34.47 3.02
104 105 2.880443 TGCTCTTTTTCCAGCCAGAAT 58.120 42.857 0.00 0.00 34.47 2.40
105 106 3.233507 TGCTCTTTTTCCAGCCAGAATT 58.766 40.909 0.00 0.00 34.47 2.17
106 107 3.642848 TGCTCTTTTTCCAGCCAGAATTT 59.357 39.130 0.00 0.00 34.47 1.82
107 108 4.240888 GCTCTTTTTCCAGCCAGAATTTC 58.759 43.478 0.00 0.00 0.00 2.17
108 109 4.262164 GCTCTTTTTCCAGCCAGAATTTCA 60.262 41.667 0.00 0.00 0.00 2.69
109 110 5.458041 TCTTTTTCCAGCCAGAATTTCAG 57.542 39.130 0.00 0.00 0.00 3.02
110 111 3.665745 TTTTCCAGCCAGAATTTCAGC 57.334 42.857 0.00 1.46 0.00 4.26
111 112 2.592102 TTCCAGCCAGAATTTCAGCT 57.408 45.000 7.84 7.84 35.52 4.24
113 114 3.715854 CAGCCAGAATTTCAGCTGC 57.284 52.632 21.24 9.02 45.44 5.25
114 115 0.172803 CAGCCAGAATTTCAGCTGCC 59.827 55.000 21.24 0.00 45.44 4.85
115 116 1.138247 GCCAGAATTTCAGCTGCCG 59.862 57.895 9.47 0.00 0.00 5.69
116 117 1.805254 CCAGAATTTCAGCTGCCGG 59.195 57.895 9.47 0.00 0.00 6.13
117 118 1.138247 CAGAATTTCAGCTGCCGGC 59.862 57.895 22.73 22.73 42.19 6.13
118 119 1.303561 AGAATTTCAGCTGCCGGCA 60.304 52.632 30.59 30.59 44.79 5.69
119 120 0.682209 AGAATTTCAGCTGCCGGCAT 60.682 50.000 32.87 14.47 44.79 4.40
120 121 0.174162 GAATTTCAGCTGCCGGCATT 59.826 50.000 32.87 19.95 44.79 3.56
121 122 1.405105 GAATTTCAGCTGCCGGCATTA 59.595 47.619 32.87 13.00 44.79 1.90
122 123 0.740737 ATTTCAGCTGCCGGCATTAC 59.259 50.000 32.87 22.29 44.79 1.89
123 124 1.312371 TTTCAGCTGCCGGCATTACC 61.312 55.000 32.87 18.29 44.79 2.85
124 125 3.211963 CAGCTGCCGGCATTACCC 61.212 66.667 32.87 15.69 44.79 3.69
125 126 4.506255 AGCTGCCGGCATTACCCC 62.506 66.667 32.87 13.85 44.79 4.95
126 127 4.506255 GCTGCCGGCATTACCCCT 62.506 66.667 32.87 0.00 41.35 4.79
127 128 2.203209 CTGCCGGCATTACCCCTC 60.203 66.667 32.87 0.00 33.26 4.30
128 129 2.690881 TGCCGGCATTACCCCTCT 60.691 61.111 29.03 0.00 33.26 3.69
129 130 2.270874 CTGCCGGCATTACCCCTCTT 62.271 60.000 32.87 0.00 33.26 2.85
130 131 1.526225 GCCGGCATTACCCCTCTTC 60.526 63.158 24.80 0.00 33.26 2.87
131 132 1.912220 CCGGCATTACCCCTCTTCA 59.088 57.895 0.00 0.00 33.26 3.02
132 133 0.474184 CCGGCATTACCCCTCTTCAT 59.526 55.000 0.00 0.00 33.26 2.57
133 134 1.597742 CGGCATTACCCCTCTTCATG 58.402 55.000 0.00 0.00 33.26 3.07
134 135 1.815408 CGGCATTACCCCTCTTCATGG 60.815 57.143 0.00 0.00 33.26 3.66
135 136 1.215423 GGCATTACCCCTCTTCATGGT 59.785 52.381 0.00 0.00 36.15 3.55
136 137 2.441750 GGCATTACCCCTCTTCATGGTA 59.558 50.000 0.00 0.00 33.55 3.25
137 138 3.117663 GGCATTACCCCTCTTCATGGTAA 60.118 47.826 3.11 3.11 45.78 2.85
138 139 4.532834 GCATTACCCCTCTTCATGGTAAA 58.467 43.478 4.64 0.00 45.10 2.01
139 140 4.338400 GCATTACCCCTCTTCATGGTAAAC 59.662 45.833 4.64 0.00 45.10 2.01
140 141 4.579647 TTACCCCTCTTCATGGTAAACC 57.420 45.455 0.00 0.00 40.65 3.27
141 142 2.644151 ACCCCTCTTCATGGTAAACCT 58.356 47.619 0.02 0.00 36.82 3.50
142 143 2.993863 ACCCCTCTTCATGGTAAACCTT 59.006 45.455 0.02 0.00 36.82 3.50
143 144 3.245264 ACCCCTCTTCATGGTAAACCTTG 60.245 47.826 8.38 8.38 41.16 3.61
144 145 3.245264 CCCCTCTTCATGGTAAACCTTGT 60.245 47.826 13.08 0.00 40.77 3.16
145 146 4.018779 CCCCTCTTCATGGTAAACCTTGTA 60.019 45.833 13.08 4.97 40.77 2.41
146 147 5.515886 CCCCTCTTCATGGTAAACCTTGTAA 60.516 44.000 13.08 7.10 40.77 2.41
147 148 6.007703 CCCTCTTCATGGTAAACCTTGTAAA 58.992 40.000 13.08 3.08 40.77 2.01
148 149 6.492087 CCCTCTTCATGGTAAACCTTGTAAAA 59.508 38.462 13.08 2.51 40.77 1.52
149 150 7.178451 CCCTCTTCATGGTAAACCTTGTAAAAT 59.822 37.037 13.08 0.00 40.77 1.82
150 151 9.238368 CCTCTTCATGGTAAACCTTGTAAAATA 57.762 33.333 13.08 0.00 40.77 1.40
163 164 8.966069 ACCTTGTAAAATAAGAGAGAATAGCC 57.034 34.615 0.00 0.00 0.00 3.93
164 165 8.548877 ACCTTGTAAAATAAGAGAGAATAGCCA 58.451 33.333 0.00 0.00 0.00 4.75
165 166 9.566432 CCTTGTAAAATAAGAGAGAATAGCCAT 57.434 33.333 0.00 0.00 0.00 4.40
176 177 8.948401 AGAGAGAATAGCCATAAGTATTGAGA 57.052 34.615 0.00 0.00 0.00 3.27
177 178 9.545928 AGAGAGAATAGCCATAAGTATTGAGAT 57.454 33.333 0.00 0.00 0.00 2.75
205 206 8.476064 AATGTGTAATAACATCCCATAATGCA 57.524 30.769 0.00 0.00 39.89 3.96
206 207 7.888250 TGTGTAATAACATCCCATAATGCAA 57.112 32.000 0.00 0.00 38.08 4.08
207 208 8.476064 TGTGTAATAACATCCCATAATGCAAT 57.524 30.769 0.00 0.00 38.08 3.56
208 209 9.579932 TGTGTAATAACATCCCATAATGCAATA 57.420 29.630 0.00 0.00 38.08 1.90
243 244 2.282701 GCATGATGCAAAATGGACGT 57.717 45.000 13.36 0.00 44.26 4.34
244 245 3.419264 GCATGATGCAAAATGGACGTA 57.581 42.857 13.36 0.00 44.26 3.57
245 246 3.968649 GCATGATGCAAAATGGACGTAT 58.031 40.909 13.36 0.00 44.26 3.06
246 247 3.976942 GCATGATGCAAAATGGACGTATC 59.023 43.478 13.36 0.00 44.26 2.24
247 248 4.497842 GCATGATGCAAAATGGACGTATCA 60.498 41.667 13.36 0.00 44.26 2.15
248 249 4.880886 TGATGCAAAATGGACGTATCAG 57.119 40.909 0.00 0.00 29.90 2.90
249 250 3.627123 TGATGCAAAATGGACGTATCAGG 59.373 43.478 0.00 0.00 29.90 3.86
250 251 1.742831 TGCAAAATGGACGTATCAGGC 59.257 47.619 0.00 0.00 0.00 4.85
251 252 1.268032 GCAAAATGGACGTATCAGGCG 60.268 52.381 0.00 0.00 0.00 5.52
252 253 1.014352 AAAATGGACGTATCAGGCGC 58.986 50.000 0.00 0.00 0.00 6.53
253 254 0.814010 AAATGGACGTATCAGGCGCC 60.814 55.000 21.89 21.89 0.00 6.53
254 255 2.971428 AATGGACGTATCAGGCGCCG 62.971 60.000 23.20 16.49 0.00 6.46
255 256 4.203076 GGACGTATCAGGCGCCGT 62.203 66.667 23.20 14.39 36.04 5.68
256 257 2.654404 GACGTATCAGGCGCCGTC 60.654 66.667 23.20 19.26 42.22 4.79
257 258 3.122250 GACGTATCAGGCGCCGTCT 62.122 63.158 23.20 11.96 44.55 4.18
258 259 2.655364 CGTATCAGGCGCCGTCTG 60.655 66.667 23.20 13.50 36.50 3.51
259 260 2.279517 GTATCAGGCGCCGTCTGG 60.280 66.667 23.20 9.77 35.77 3.86
278 279 4.593864 GCCCGCCTGGTCTCGATC 62.594 72.222 0.00 0.00 36.04 3.69
279 280 4.271816 CCCGCCTGGTCTCGATCG 62.272 72.222 9.36 9.36 0.00 3.69
280 281 3.518998 CCGCCTGGTCTCGATCGT 61.519 66.667 15.94 0.00 0.00 3.73
281 282 2.024871 CGCCTGGTCTCGATCGTC 59.975 66.667 15.94 7.05 0.00 4.20
282 283 2.761195 CGCCTGGTCTCGATCGTCA 61.761 63.158 15.94 8.71 0.00 4.35
283 284 1.736586 GCCTGGTCTCGATCGTCAT 59.263 57.895 15.94 0.00 0.00 3.06
284 285 0.596083 GCCTGGTCTCGATCGTCATG 60.596 60.000 15.94 7.92 0.00 3.07
285 286 0.031314 CCTGGTCTCGATCGTCATGG 59.969 60.000 15.94 7.51 0.00 3.66
286 287 0.031314 CTGGTCTCGATCGTCATGGG 59.969 60.000 15.94 0.00 0.00 4.00
287 288 1.364171 GGTCTCGATCGTCATGGGG 59.636 63.158 15.94 0.00 0.00 4.96
288 289 1.392710 GGTCTCGATCGTCATGGGGT 61.393 60.000 15.94 0.00 0.00 4.95
289 290 1.315690 GTCTCGATCGTCATGGGGTA 58.684 55.000 15.94 0.00 0.00 3.69
293 294 1.464376 CGATCGTCATGGGGTAGGCT 61.464 60.000 7.03 0.00 0.00 4.58
300 301 0.541863 CATGGGGTAGGCTCGAGTTT 59.458 55.000 15.13 5.17 0.00 2.66
310 311 2.145053 GCTCGAGTTTACGTGCAATG 57.855 50.000 15.13 0.00 46.85 2.82
345 346 6.657966 TGACCTATTAGAAGTGAAAGAGTCGA 59.342 38.462 0.00 0.00 0.00 4.20
393 396 9.824534 TTTTTCTTTGATGTTTTTCTTTCTTGC 57.175 25.926 0.00 0.00 0.00 4.01
397 400 9.218440 TCTTTGATGTTTTTCTTTCTTGCTTTT 57.782 25.926 0.00 0.00 0.00 2.27
399 402 8.776376 TTGATGTTTTTCTTTCTTGCTTTTCT 57.224 26.923 0.00 0.00 0.00 2.52
405 408 9.447040 GTTTTTCTTTCTTGCTTTTCTACGTAT 57.553 29.630 0.00 0.00 0.00 3.06
495 499 6.293004 TCTCCATTTGTTGTTTGGTTTCTT 57.707 33.333 0.00 0.00 0.00 2.52
609 645 3.136750 CCATCTGGGCTCCTCTCG 58.863 66.667 0.00 0.00 0.00 4.04
610 646 1.456518 CCATCTGGGCTCCTCTCGA 60.457 63.158 0.00 0.00 0.00 4.04
612 648 1.826054 ATCTGGGCTCCTCTCGACG 60.826 63.158 0.00 0.00 0.00 5.12
613 649 4.200283 CTGGGCTCCTCTCGACGC 62.200 72.222 0.00 0.00 0.00 5.19
638 692 4.459089 GGAGCTCGAGCACCCCAC 62.459 72.222 35.50 19.90 44.49 4.61
1008 1148 0.248417 CTGAGACTCGGATGCTGTCG 60.248 60.000 5.24 0.00 36.01 4.35
1026 1166 2.029844 GCAGCTCACTGGACCGTTC 61.030 63.158 0.00 0.00 44.63 3.95
1242 1382 9.073475 TGGTACTAGTATTTGCTGATTTTGTTT 57.927 29.630 5.75 0.00 0.00 2.83
1260 1400 6.825284 TTGTTTGTGTGATAAAGTTGCATG 57.175 33.333 0.00 0.00 0.00 4.06
1274 1414 1.979855 TGCATGCCTGTGTGTAAACT 58.020 45.000 16.68 0.00 0.00 2.66
1518 1832 4.219288 GGATCCTAACATCAATTCCATGGC 59.781 45.833 6.96 0.00 0.00 4.40
1796 2110 6.705825 GCACCTGTTTCATTTTGGAATAACTT 59.294 34.615 0.00 0.00 0.00 2.66
1797 2111 7.307337 GCACCTGTTTCATTTTGGAATAACTTG 60.307 37.037 0.00 0.00 0.00 3.16
1798 2112 6.705825 ACCTGTTTCATTTTGGAATAACTTGC 59.294 34.615 0.00 0.00 0.00 4.01
1799 2113 6.930722 CCTGTTTCATTTTGGAATAACTTGCT 59.069 34.615 0.00 0.00 0.00 3.91
1860 2174 8.930527 TGGTGGTATAACTAGTTTACATATGCT 58.069 33.333 14.49 0.00 0.00 3.79
1885 2199 5.431765 CCTACACTTTGGACAGATTAGCAT 58.568 41.667 0.00 0.00 0.00 3.79
1958 2272 8.472413 GGTAAACTGGTAGTATGTGTGAGAATA 58.528 37.037 0.00 0.00 0.00 1.75
2025 2339 3.099905 TCTGAACTGACCGATCCTGATT 58.900 45.455 0.00 0.00 0.00 2.57
2057 2371 2.093658 TGCTGAGGGTAAACGATCCTTC 60.094 50.000 0.00 0.00 0.00 3.46
2162 2476 1.159285 TTGAAGCAAGGCACGATGAG 58.841 50.000 0.00 0.00 0.00 2.90
2321 2635 4.041567 TGATTCTGGCTTGTCTTTCCTACA 59.958 41.667 0.00 0.00 0.00 2.74
2710 3104 1.451067 GCAGAGAACATGCAAGCTCT 58.549 50.000 0.00 0.00 43.31 4.09
2724 3118 7.775093 ACATGCAAGCTCTAGAAACCAATATAA 59.225 33.333 0.00 0.00 0.00 0.98
2928 3323 3.428282 GCCGCAAACGTACCTGGG 61.428 66.667 0.00 0.00 37.70 4.45
2983 3378 4.263311 AACCTGGGGGAGGGTTAC 57.737 61.111 0.00 0.00 39.70 2.50
3073 3475 3.795280 CTTCGCCCGCGCATTGATG 62.795 63.158 8.75 0.00 39.59 3.07
3154 3559 4.136978 AGGTGACTCGATGGCCTT 57.863 55.556 3.32 0.00 32.90 4.35
3212 3617 2.325082 GCTGGTTCAATGCGGACGT 61.325 57.895 0.00 0.00 0.00 4.34
3215 3620 2.175811 GTTCAATGCGGACGTGGC 59.824 61.111 0.00 0.00 0.00 5.01
3240 3645 4.162690 GCCTAGTCCGGCCACTGG 62.163 72.222 2.24 0.89 44.41 4.00
3256 3661 0.670546 CTGGACGACATTGAAGCGGT 60.671 55.000 0.00 0.00 0.00 5.68
3296 3701 3.439129 GCCTATTTAAGCAGTGTTTCGGT 59.561 43.478 0.00 0.00 0.00 4.69
3321 3726 1.671379 GTCACCGCAAACCCTCTCC 60.671 63.158 0.00 0.00 0.00 3.71
3424 3829 3.743534 TTAGGGCGGCCATGCGTAC 62.744 63.158 31.59 0.67 35.06 3.67
3586 3991 4.203950 TCGTCCGTTTGATTCAAGTTTG 57.796 40.909 0.00 0.00 0.00 2.93
3601 4006 8.810652 ATTCAAGTTTGTTATTAAATGCGTGT 57.189 26.923 0.00 0.00 0.00 4.49
3642 4047 3.883744 GATGGCCGCCTCCCGTATG 62.884 68.421 11.61 0.00 34.38 2.39
3652 4057 1.663379 CTCCCGTATGCGTGTCTCCA 61.663 60.000 1.69 0.00 36.15 3.86
3722 4129 5.513094 GCCCATAGTGTGCCTAGATTTATCA 60.513 44.000 0.00 0.00 0.00 2.15
3729 4136 5.991606 GTGTGCCTAGATTTATCATAGTGCA 59.008 40.000 0.00 0.00 0.00 4.57
3730 4137 5.991606 TGTGCCTAGATTTATCATAGTGCAC 59.008 40.000 9.40 9.40 40.38 4.57
3732 4139 4.092091 GCCTAGATTTATCATAGTGCACGC 59.908 45.833 12.01 0.00 0.00 5.34
3905 4373 1.329171 GCCCCAATTACAGCATGCCA 61.329 55.000 15.66 0.00 42.53 4.92
3974 4442 3.242543 CGCTGGTGCATAGAGTTGATTTC 60.243 47.826 5.24 0.00 39.64 2.17
3975 4443 3.691118 GCTGGTGCATAGAGTTGATTTCA 59.309 43.478 5.24 0.00 39.41 2.69
4019 4490 6.482308 ACTGTTATTAATATCAGACAACCGCC 59.518 38.462 28.42 0.00 35.25 6.13
4503 4977 3.118592 CCTCACTTCACCTGGTCTTATCC 60.119 52.174 0.00 0.00 0.00 2.59
4555 5030 1.662686 AGCTTAGTTCCAGCCTCCTT 58.337 50.000 0.00 0.00 38.09 3.36
4569 5044 3.826729 AGCCTCCTTTGAATGTAAACACC 59.173 43.478 0.00 0.00 0.00 4.16
4585 5060 7.091443 TGTAAACACCTGTAAAACCTGTTTTG 58.909 34.615 16.20 3.87 42.18 2.44
4591 5066 5.299782 ACCTGTAAAACCTGTTTTGCGATTA 59.700 36.000 16.20 1.09 44.46 1.75
4595 5070 7.872881 TGTAAAACCTGTTTTGCGATTATGTA 58.127 30.769 16.20 0.00 44.46 2.29
4602 5080 8.736244 ACCTGTTTTGCGATTATGTACTATTTT 58.264 29.630 0.00 0.00 0.00 1.82
4603 5081 9.221775 CCTGTTTTGCGATTATGTACTATTTTC 57.778 33.333 0.00 0.00 0.00 2.29
4606 5084 9.434559 GTTTTGCGATTATGTACTATTTTCTCC 57.565 33.333 0.00 0.00 0.00 3.71
4609 5087 6.929049 TGCGATTATGTACTATTTTCTCCAGG 59.071 38.462 0.00 0.00 0.00 4.45
4611 5089 6.369065 CGATTATGTACTATTTTCTCCAGGGC 59.631 42.308 0.00 0.00 0.00 5.19
4631 5109 5.190528 AGGGCTGATCATTTTCTTCAGTAGA 59.809 40.000 0.00 0.00 39.24 2.59
4632 5110 6.060788 GGGCTGATCATTTTCTTCAGTAGAT 58.939 40.000 0.00 0.00 39.24 1.98
4715 5215 3.328050 ACCAGTGTAGAGGAAAAAGGGAG 59.672 47.826 0.00 0.00 0.00 4.30
4720 5220 2.575805 AGAGGAAAAAGGGAGCACTG 57.424 50.000 0.00 0.00 0.00 3.66
4783 5284 9.258826 CTTATATCATATGGCTTATCTGCTGTC 57.741 37.037 2.13 0.00 0.00 3.51
4812 5313 9.326339 CTCATGTCTTGCAATGAAATATTATCG 57.674 33.333 0.00 0.00 0.00 2.92
4830 5331 4.771590 ATCGTCAAAGCAATGTGAACAT 57.228 36.364 0.00 0.00 38.41 2.71
4869 5373 4.634443 AGGACGCCTTTTATTCACACATAC 59.366 41.667 0.00 0.00 0.00 2.39
4896 5400 7.505585 TGATCTTTGTTTCTGGTTCTGGTATTT 59.494 33.333 0.00 0.00 0.00 1.40
4930 5434 1.367346 TGATAGAAACTGGGGGTGCA 58.633 50.000 0.00 0.00 0.00 4.57
4936 5440 1.282157 GAAACTGGGGGTGCATCTACT 59.718 52.381 0.00 0.00 0.00 2.57
4937 5441 0.912486 AACTGGGGGTGCATCTACTC 59.088 55.000 0.00 0.00 0.00 2.59
4938 5442 0.983378 ACTGGGGGTGCATCTACTCC 60.983 60.000 0.00 0.00 40.67 3.85
4940 5444 4.401657 GGGGTGCATCTACTCCCT 57.598 61.111 7.67 0.00 42.08 4.20
4941 5445 2.137692 GGGGTGCATCTACTCCCTC 58.862 63.158 7.67 0.00 42.08 4.30
4942 5446 1.411651 GGGGTGCATCTACTCCCTCC 61.412 65.000 7.67 0.00 42.08 4.30
4943 5447 1.742768 GGTGCATCTACTCCCTCCG 59.257 63.158 0.00 0.00 0.00 4.63
4944 5448 1.043673 GGTGCATCTACTCCCTCCGT 61.044 60.000 0.00 0.00 0.00 4.69
4945 5449 0.386113 GTGCATCTACTCCCTCCGTC 59.614 60.000 0.00 0.00 0.00 4.79
4946 5450 0.755698 TGCATCTACTCCCTCCGTCC 60.756 60.000 0.00 0.00 0.00 4.79
4947 5451 1.797211 GCATCTACTCCCTCCGTCCG 61.797 65.000 0.00 0.00 0.00 4.79
4948 5452 1.528776 ATCTACTCCCTCCGTCCGC 60.529 63.158 0.00 0.00 0.00 5.54
4949 5453 3.584052 CTACTCCCTCCGTCCGCG 61.584 72.222 0.00 0.00 37.95 6.46
4950 5454 4.100084 TACTCCCTCCGTCCGCGA 62.100 66.667 8.23 0.00 41.33 5.87
4951 5455 3.626996 TACTCCCTCCGTCCGCGAA 62.627 63.158 8.23 0.00 41.33 4.70
4952 5456 2.898920 TACTCCCTCCGTCCGCGAAT 62.899 60.000 8.23 0.00 41.33 3.34
4953 5457 2.124193 TCCCTCCGTCCGCGAATA 60.124 61.111 8.23 0.00 41.33 1.75
4954 5458 1.731433 CTCCCTCCGTCCGCGAATAA 61.731 60.000 8.23 0.00 41.33 1.40
4955 5459 1.299926 CCCTCCGTCCGCGAATAAG 60.300 63.158 8.23 0.00 41.33 1.73
4956 5460 1.436336 CCTCCGTCCGCGAATAAGT 59.564 57.895 8.23 0.00 41.33 2.24
4957 5461 0.870307 CCTCCGTCCGCGAATAAGTG 60.870 60.000 8.23 0.00 41.33 3.16
4958 5462 0.179145 CTCCGTCCGCGAATAAGTGT 60.179 55.000 8.23 0.00 41.33 3.55
4959 5463 1.064505 CTCCGTCCGCGAATAAGTGTA 59.935 52.381 8.23 0.00 41.33 2.90
4960 5464 1.194495 CCGTCCGCGAATAAGTGTAC 58.806 55.000 8.23 0.00 41.33 2.90
4961 5465 1.202222 CCGTCCGCGAATAAGTGTACT 60.202 52.381 8.23 0.00 41.33 2.73
4962 5466 2.523015 CGTCCGCGAATAAGTGTACTT 58.477 47.619 8.23 2.51 41.33 2.24
4963 5467 2.529090 CGTCCGCGAATAAGTGTACTTC 59.471 50.000 8.23 0.00 41.33 3.01
4964 5468 3.730061 CGTCCGCGAATAAGTGTACTTCT 60.730 47.826 8.23 0.00 41.33 2.85
4965 5469 4.494690 CGTCCGCGAATAAGTGTACTTCTA 60.495 45.833 8.23 0.00 41.33 2.10
4966 5470 4.732442 GTCCGCGAATAAGTGTACTTCTAC 59.268 45.833 8.23 0.00 37.40 2.59
4967 5471 4.040376 CCGCGAATAAGTGTACTTCTACC 58.960 47.826 8.23 0.00 37.40 3.18
4968 5472 4.439153 CCGCGAATAAGTGTACTTCTACCA 60.439 45.833 8.23 0.00 37.40 3.25
4969 5473 5.279384 CGCGAATAAGTGTACTTCTACCAT 58.721 41.667 0.00 0.00 37.40 3.55
4970 5474 5.747197 CGCGAATAAGTGTACTTCTACCATT 59.253 40.000 0.00 0.00 37.40 3.16
4971 5475 6.255020 CGCGAATAAGTGTACTTCTACCATTT 59.745 38.462 0.00 0.00 37.40 2.32
4972 5476 7.201496 CGCGAATAAGTGTACTTCTACCATTTT 60.201 37.037 0.00 0.00 37.40 1.82
4973 5477 8.448615 GCGAATAAGTGTACTTCTACCATTTTT 58.551 33.333 0.00 0.00 37.40 1.94
5018 5522 9.586435 AATTTTGACCAACTTGTTAGAAAAGAG 57.414 29.630 0.00 0.00 0.00 2.85
5019 5523 7.696992 TTTGACCAACTTGTTAGAAAAGAGT 57.303 32.000 0.00 0.00 0.00 3.24
5020 5524 8.795842 TTTGACCAACTTGTTAGAAAAGAGTA 57.204 30.769 0.00 0.00 0.00 2.59
5021 5525 8.433421 TTGACCAACTTGTTAGAAAAGAGTAG 57.567 34.615 0.00 0.00 0.00 2.57
5022 5526 7.562135 TGACCAACTTGTTAGAAAAGAGTAGT 58.438 34.615 0.00 0.00 0.00 2.73
5023 5527 8.698210 TGACCAACTTGTTAGAAAAGAGTAGTA 58.302 33.333 0.00 0.00 0.00 1.82
5024 5528 9.194271 GACCAACTTGTTAGAAAAGAGTAGTAG 57.806 37.037 0.00 0.00 0.00 2.57
5025 5529 8.148999 ACCAACTTGTTAGAAAAGAGTAGTAGG 58.851 37.037 0.00 0.00 0.00 3.18
5026 5530 8.148999 CCAACTTGTTAGAAAAGAGTAGTAGGT 58.851 37.037 0.00 0.00 0.00 3.08
5027 5531 9.543783 CAACTTGTTAGAAAAGAGTAGTAGGTT 57.456 33.333 0.00 0.00 0.00 3.50
5046 5550 9.920946 AGTAGGTTTATATGACATCAAATTGGT 57.079 29.630 0.00 0.00 0.00 3.67
5108 5612 9.801873 ATACTAATTTTGTGTCATAAATGGTGC 57.198 29.630 0.00 0.00 0.00 5.01
5109 5613 7.895759 ACTAATTTTGTGTCATAAATGGTGCT 58.104 30.769 0.00 0.00 0.00 4.40
5110 5614 9.019656 ACTAATTTTGTGTCATAAATGGTGCTA 57.980 29.630 0.00 0.00 0.00 3.49
5111 5615 9.289303 CTAATTTTGTGTCATAAATGGTGCTAC 57.711 33.333 0.00 0.00 0.00 3.58
5112 5616 6.892658 TTTTGTGTCATAAATGGTGCTACT 57.107 33.333 0.00 0.00 0.00 2.57
5113 5617 6.892658 TTTGTGTCATAAATGGTGCTACTT 57.107 33.333 0.00 0.00 0.00 2.24
5114 5618 6.892658 TTGTGTCATAAATGGTGCTACTTT 57.107 33.333 0.00 0.00 0.00 2.66
5115 5619 6.892658 TGTGTCATAAATGGTGCTACTTTT 57.107 33.333 0.00 0.00 0.00 2.27
5116 5620 7.987750 TGTGTCATAAATGGTGCTACTTTTA 57.012 32.000 0.00 0.00 0.00 1.52
5117 5621 7.812648 TGTGTCATAAATGGTGCTACTTTTAC 58.187 34.615 0.00 0.00 0.00 2.01
5118 5622 7.094549 TGTGTCATAAATGGTGCTACTTTTACC 60.095 37.037 0.00 0.00 35.05 2.85
5119 5623 7.120726 GTGTCATAAATGGTGCTACTTTTACCT 59.879 37.037 0.00 0.00 35.51 3.08
5120 5624 8.322828 TGTCATAAATGGTGCTACTTTTACCTA 58.677 33.333 0.00 0.00 35.51 3.08
5121 5625 9.338622 GTCATAAATGGTGCTACTTTTACCTAT 57.661 33.333 0.00 0.00 35.51 2.57
5126 5630 9.749340 AAATGGTGCTACTTTTACCTATAAAGT 57.251 29.630 0.00 0.00 45.19 2.66
5127 5631 9.749340 AATGGTGCTACTTTTACCTATAAAGTT 57.251 29.630 6.33 0.00 41.69 2.66
5128 5632 8.556213 TGGTGCTACTTTTACCTATAAAGTTG 57.444 34.615 6.33 6.06 41.69 3.16
5129 5633 7.608761 TGGTGCTACTTTTACCTATAAAGTTGG 59.391 37.037 6.33 2.81 41.69 3.77
5130 5634 7.609146 GGTGCTACTTTTACCTATAAAGTTGGT 59.391 37.037 6.33 0.00 41.69 3.67
5131 5635 8.663025 GTGCTACTTTTACCTATAAAGTTGGTC 58.337 37.037 6.33 0.00 41.69 4.02
5132 5636 8.377034 TGCTACTTTTACCTATAAAGTTGGTCA 58.623 33.333 6.33 0.00 41.69 4.02
5133 5637 9.223099 GCTACTTTTACCTATAAAGTTGGTCAA 57.777 33.333 6.33 0.00 41.69 3.18
5136 5640 9.636789 ACTTTTACCTATAAAGTTGGTCAAAGT 57.363 29.630 14.25 14.25 46.14 2.66
5140 5644 9.629878 TTACCTATAAAGTTGGTCAAAGTTTCA 57.370 29.630 0.00 0.00 40.00 2.69
5141 5645 8.528044 ACCTATAAAGTTGGTCAAAGTTTCAA 57.472 30.769 0.00 0.00 40.00 2.69
5142 5646 8.973182 ACCTATAAAGTTGGTCAAAGTTTCAAA 58.027 29.630 0.00 0.00 40.00 2.69
5143 5647 9.810545 CCTATAAAGTTGGTCAAAGTTTCAAAA 57.189 29.630 0.00 0.00 40.00 2.44
5160 5664 9.974980 AGTTTCAAAACTTTGAGTTAGAACAAA 57.025 25.926 14.47 0.00 46.52 2.83
5163 5667 8.460831 TCAAAACTTTGAGTTAGAACAAAAGC 57.539 30.769 15.21 0.00 41.88 3.51
5164 5668 8.303876 TCAAAACTTTGAGTTAGAACAAAAGCT 58.696 29.630 15.21 5.94 41.88 3.74
5165 5669 9.567848 CAAAACTTTGAGTTAGAACAAAAGCTA 57.432 29.630 15.21 0.00 37.47 3.32
5166 5670 9.788960 AAAACTTTGAGTTAGAACAAAAGCTAG 57.211 29.630 15.21 0.00 37.47 3.42
5167 5671 8.732746 AACTTTGAGTTAGAACAAAAGCTAGA 57.267 30.769 15.21 0.00 36.52 2.43
5168 5672 8.910351 ACTTTGAGTTAGAACAAAAGCTAGAT 57.090 30.769 15.21 0.00 37.89 1.98
5169 5673 8.778358 ACTTTGAGTTAGAACAAAAGCTAGATG 58.222 33.333 15.21 0.00 37.89 2.90
5170 5674 8.677148 TTTGAGTTAGAACAAAAGCTAGATGT 57.323 30.769 0.00 0.00 33.90 3.06
5171 5675 9.772973 TTTGAGTTAGAACAAAAGCTAGATGTA 57.227 29.630 0.00 0.00 33.90 2.29
5172 5676 8.758633 TGAGTTAGAACAAAAGCTAGATGTAC 57.241 34.615 0.00 0.00 0.00 2.90
5173 5677 8.364894 TGAGTTAGAACAAAAGCTAGATGTACA 58.635 33.333 0.00 0.00 0.00 2.90
5174 5678 8.535690 AGTTAGAACAAAAGCTAGATGTACAC 57.464 34.615 0.00 0.00 0.00 2.90
5175 5679 8.368668 AGTTAGAACAAAAGCTAGATGTACACT 58.631 33.333 0.00 0.13 0.00 3.55
5176 5680 8.989980 GTTAGAACAAAAGCTAGATGTACACTT 58.010 33.333 0.00 0.00 0.00 3.16
5179 5683 9.726438 AGAACAAAAGCTAGATGTACACTTATT 57.274 29.630 0.00 0.00 0.00 1.40
5180 5684 9.974750 GAACAAAAGCTAGATGTACACTTATTC 57.025 33.333 0.00 0.00 0.00 1.75
5181 5685 8.186178 ACAAAAGCTAGATGTACACTTATTCG 57.814 34.615 0.00 0.00 0.00 3.34
5182 5686 6.830114 AAAGCTAGATGTACACTTATTCGC 57.170 37.500 0.00 0.00 0.00 4.70
5183 5687 4.537965 AGCTAGATGTACACTTATTCGCG 58.462 43.478 0.00 0.00 0.00 5.87
5184 5688 3.669122 GCTAGATGTACACTTATTCGCGG 59.331 47.826 6.13 0.00 0.00 6.46
5185 5689 4.556104 GCTAGATGTACACTTATTCGCGGA 60.556 45.833 6.13 0.00 0.00 5.54
5186 5690 3.703420 AGATGTACACTTATTCGCGGAC 58.297 45.455 6.13 0.00 0.00 4.79
5187 5691 1.898938 TGTACACTTATTCGCGGACG 58.101 50.000 6.13 0.00 42.01 4.79
5188 5692 1.194495 GTACACTTATTCGCGGACGG 58.806 55.000 6.13 0.00 40.63 4.79
5189 5693 1.093972 TACACTTATTCGCGGACGGA 58.906 50.000 6.13 0.00 40.63 4.69
5190 5694 0.179145 ACACTTATTCGCGGACGGAG 60.179 55.000 6.13 0.00 40.63 4.63
5191 5695 0.870307 CACTTATTCGCGGACGGAGG 60.870 60.000 6.13 0.00 40.63 4.30
5192 5696 1.299926 CTTATTCGCGGACGGAGGG 60.300 63.158 6.13 0.00 40.63 4.30
5193 5697 1.731433 CTTATTCGCGGACGGAGGGA 61.731 60.000 6.13 0.00 40.63 4.20
5194 5698 1.731433 TTATTCGCGGACGGAGGGAG 61.731 60.000 6.13 0.00 40.63 4.30
5195 5699 2.898920 TATTCGCGGACGGAGGGAGT 62.899 60.000 6.13 0.00 40.63 3.85
5196 5700 2.898920 ATTCGCGGACGGAGGGAGTA 62.899 60.000 6.13 0.00 40.63 2.59
5197 5701 3.885521 CGCGGACGGAGGGAGTAC 61.886 72.222 0.00 0.00 34.97 2.73
5198 5702 2.753043 GCGGACGGAGGGAGTACA 60.753 66.667 0.00 0.00 0.00 2.90
5229 5734 7.136772 AGGCGACAAACTAACAACTTAATTTC 58.863 34.615 0.00 0.00 0.00 2.17
5232 5737 8.679385 GCGACAAACTAACAACTTAATTTCTTC 58.321 33.333 0.00 0.00 0.00 2.87
5274 5779 2.094286 AGTTTCTCTGACATGGCTCTCG 60.094 50.000 0.00 0.00 0.00 4.04
5284 5789 1.601703 TGGCTCTCGGCATTAGCAA 59.398 52.632 0.00 0.00 44.61 3.91
5292 5797 0.097674 CGGCATTAGCAAGCACTGAC 59.902 55.000 0.00 0.00 44.61 3.51
5404 5913 3.399330 TGACAGCAAAGTAACAGGCTAC 58.601 45.455 0.00 0.00 34.25 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 5.473066 AACTCCATGAAACATCCTTTTGG 57.527 39.130 0.00 0.00 42.21 3.28
22 23 6.514947 TCAAACTCCATGAAACATCCTTTTG 58.485 36.000 0.00 0.00 0.00 2.44
23 24 6.239402 CCTCAAACTCCATGAAACATCCTTTT 60.239 38.462 0.00 0.00 0.00 2.27
24 25 5.244626 CCTCAAACTCCATGAAACATCCTTT 59.755 40.000 0.00 0.00 0.00 3.11
25 26 4.768968 CCTCAAACTCCATGAAACATCCTT 59.231 41.667 0.00 0.00 0.00 3.36
26 27 4.043310 TCCTCAAACTCCATGAAACATCCT 59.957 41.667 0.00 0.00 0.00 3.24
27 28 4.156739 GTCCTCAAACTCCATGAAACATCC 59.843 45.833 0.00 0.00 0.00 3.51
28 29 5.006386 AGTCCTCAAACTCCATGAAACATC 58.994 41.667 0.00 0.00 0.00 3.06
29 30 4.990526 AGTCCTCAAACTCCATGAAACAT 58.009 39.130 0.00 0.00 0.00 2.71
30 31 4.437682 AGTCCTCAAACTCCATGAAACA 57.562 40.909 0.00 0.00 0.00 2.83
31 32 5.774498 AAAGTCCTCAAACTCCATGAAAC 57.226 39.130 0.00 0.00 0.00 2.78
32 33 5.068987 CCAAAAGTCCTCAAACTCCATGAAA 59.931 40.000 0.00 0.00 0.00 2.69
33 34 4.584325 CCAAAAGTCCTCAAACTCCATGAA 59.416 41.667 0.00 0.00 0.00 2.57
34 35 4.141274 TCCAAAAGTCCTCAAACTCCATGA 60.141 41.667 0.00 0.00 0.00 3.07
35 36 4.144297 TCCAAAAGTCCTCAAACTCCATG 58.856 43.478 0.00 0.00 0.00 3.66
36 37 4.401925 CTCCAAAAGTCCTCAAACTCCAT 58.598 43.478 0.00 0.00 0.00 3.41
37 38 3.820557 CTCCAAAAGTCCTCAAACTCCA 58.179 45.455 0.00 0.00 0.00 3.86
38 39 2.554462 GCTCCAAAAGTCCTCAAACTCC 59.446 50.000 0.00 0.00 0.00 3.85
39 40 3.251972 CAGCTCCAAAAGTCCTCAAACTC 59.748 47.826 0.00 0.00 0.00 3.01
40 41 3.217626 CAGCTCCAAAAGTCCTCAAACT 58.782 45.455 0.00 0.00 0.00 2.66
41 42 2.952310 ACAGCTCCAAAAGTCCTCAAAC 59.048 45.455 0.00 0.00 0.00 2.93
42 43 2.951642 CACAGCTCCAAAAGTCCTCAAA 59.048 45.455 0.00 0.00 0.00 2.69
43 44 2.092429 ACACAGCTCCAAAAGTCCTCAA 60.092 45.455 0.00 0.00 0.00 3.02
44 45 1.490490 ACACAGCTCCAAAAGTCCTCA 59.510 47.619 0.00 0.00 0.00 3.86
45 46 2.262423 ACACAGCTCCAAAAGTCCTC 57.738 50.000 0.00 0.00 0.00 3.71
46 47 2.972713 TCTACACAGCTCCAAAAGTCCT 59.027 45.455 0.00 0.00 0.00 3.85
47 48 3.402628 TCTACACAGCTCCAAAAGTCC 57.597 47.619 0.00 0.00 0.00 3.85
48 49 6.595716 ACATATTCTACACAGCTCCAAAAGTC 59.404 38.462 0.00 0.00 0.00 3.01
49 50 6.476378 ACATATTCTACACAGCTCCAAAAGT 58.524 36.000 0.00 0.00 0.00 2.66
50 51 6.992063 ACATATTCTACACAGCTCCAAAAG 57.008 37.500 0.00 0.00 0.00 2.27
51 52 7.094377 GGAAACATATTCTACACAGCTCCAAAA 60.094 37.037 0.00 0.00 0.00 2.44
52 53 6.374333 GGAAACATATTCTACACAGCTCCAAA 59.626 38.462 0.00 0.00 0.00 3.28
53 54 5.880332 GGAAACATATTCTACACAGCTCCAA 59.120 40.000 0.00 0.00 0.00 3.53
54 55 5.045942 TGGAAACATATTCTACACAGCTCCA 60.046 40.000 0.00 0.00 33.40 3.86
55 56 5.428253 TGGAAACATATTCTACACAGCTCC 58.572 41.667 0.00 0.00 33.40 4.70
56 57 6.985188 TTGGAAACATATTCTACACAGCTC 57.015 37.500 0.00 0.00 42.32 4.09
57 58 6.886459 ACATTGGAAACATATTCTACACAGCT 59.114 34.615 0.00 0.00 42.32 4.24
58 59 7.088589 ACATTGGAAACATATTCTACACAGC 57.911 36.000 0.00 0.00 42.32 4.40
59 60 9.345517 CAAACATTGGAAACATATTCTACACAG 57.654 33.333 0.00 0.00 42.32 3.66
60 61 7.812191 GCAAACATTGGAAACATATTCTACACA 59.188 33.333 0.00 0.00 42.32 3.72
61 62 8.028938 AGCAAACATTGGAAACATATTCTACAC 58.971 33.333 0.00 0.00 42.32 2.90
62 63 8.121305 AGCAAACATTGGAAACATATTCTACA 57.879 30.769 0.00 0.00 42.32 2.74
63 64 8.462016 AGAGCAAACATTGGAAACATATTCTAC 58.538 33.333 0.00 0.00 42.32 2.59
64 65 8.579850 AGAGCAAACATTGGAAACATATTCTA 57.420 30.769 0.00 0.00 42.32 2.10
65 66 7.472334 AGAGCAAACATTGGAAACATATTCT 57.528 32.000 0.00 0.00 42.32 2.40
66 67 8.538409 AAAGAGCAAACATTGGAAACATATTC 57.462 30.769 0.00 0.00 42.32 1.75
67 68 8.907222 AAAAGAGCAAACATTGGAAACATATT 57.093 26.923 0.00 0.00 42.32 1.28
68 69 8.907222 AAAAAGAGCAAACATTGGAAACATAT 57.093 26.923 0.00 0.00 42.32 1.78
69 70 7.440856 GGAAAAAGAGCAAACATTGGAAACATA 59.559 33.333 0.00 0.00 42.32 2.29
70 71 6.260714 GGAAAAAGAGCAAACATTGGAAACAT 59.739 34.615 0.00 0.00 42.32 2.71
71 72 5.584251 GGAAAAAGAGCAAACATTGGAAACA 59.416 36.000 0.00 0.00 39.83 2.83
72 73 5.584251 TGGAAAAAGAGCAAACATTGGAAAC 59.416 36.000 0.00 0.00 0.00 2.78
73 74 5.738909 TGGAAAAAGAGCAAACATTGGAAA 58.261 33.333 0.00 0.00 0.00 3.13
74 75 5.350504 TGGAAAAAGAGCAAACATTGGAA 57.649 34.783 0.00 0.00 0.00 3.53
75 76 4.740334 GCTGGAAAAAGAGCAAACATTGGA 60.740 41.667 0.00 0.00 35.15 3.53
76 77 3.495753 GCTGGAAAAAGAGCAAACATTGG 59.504 43.478 0.00 0.00 35.15 3.16
77 78 3.495753 GGCTGGAAAAAGAGCAAACATTG 59.504 43.478 0.00 0.00 36.90 2.82
78 79 3.134442 TGGCTGGAAAAAGAGCAAACATT 59.866 39.130 0.00 0.00 36.90 2.71
79 80 2.699846 TGGCTGGAAAAAGAGCAAACAT 59.300 40.909 0.00 0.00 36.90 2.71
80 81 2.101249 CTGGCTGGAAAAAGAGCAAACA 59.899 45.455 0.00 0.00 36.90 2.83
81 82 2.362077 TCTGGCTGGAAAAAGAGCAAAC 59.638 45.455 0.00 0.00 36.90 2.93
82 83 2.665165 TCTGGCTGGAAAAAGAGCAAA 58.335 42.857 0.00 0.00 36.90 3.68
83 84 2.363306 TCTGGCTGGAAAAAGAGCAA 57.637 45.000 0.00 0.00 36.90 3.91
84 85 2.363306 TTCTGGCTGGAAAAAGAGCA 57.637 45.000 0.00 0.00 36.90 4.26
85 86 3.949842 AATTCTGGCTGGAAAAAGAGC 57.050 42.857 0.00 0.00 34.23 4.09
86 87 5.458041 TGAAATTCTGGCTGGAAAAAGAG 57.542 39.130 0.00 0.00 0.00 2.85
87 88 4.262164 GCTGAAATTCTGGCTGGAAAAAGA 60.262 41.667 2.18 0.00 0.00 2.52
88 89 3.992427 GCTGAAATTCTGGCTGGAAAAAG 59.008 43.478 2.18 0.00 0.00 2.27
89 90 3.642848 AGCTGAAATTCTGGCTGGAAAAA 59.357 39.130 11.61 0.00 33.50 1.94
90 91 3.006110 CAGCTGAAATTCTGGCTGGAAAA 59.994 43.478 23.04 0.00 45.59 2.29
91 92 2.559668 CAGCTGAAATTCTGGCTGGAAA 59.440 45.455 23.04 0.00 45.59 3.13
92 93 2.165167 CAGCTGAAATTCTGGCTGGAA 58.835 47.619 23.04 0.00 45.59 3.53
93 94 1.830279 CAGCTGAAATTCTGGCTGGA 58.170 50.000 23.04 0.00 45.59 3.86
98 99 1.805254 CCGGCAGCTGAAATTCTGG 59.195 57.895 20.43 9.95 0.00 3.86
99 100 1.138247 GCCGGCAGCTGAAATTCTG 59.862 57.895 24.80 3.81 38.99 3.02
100 101 0.682209 ATGCCGGCAGCTGAAATTCT 60.682 50.000 35.36 11.04 44.23 2.40
101 102 0.174162 AATGCCGGCAGCTGAAATTC 59.826 50.000 35.36 0.00 44.23 2.17
102 103 1.134946 GTAATGCCGGCAGCTGAAATT 59.865 47.619 35.36 23.41 44.23 1.82
103 104 0.740737 GTAATGCCGGCAGCTGAAAT 59.259 50.000 35.36 13.63 44.23 2.17
104 105 1.312371 GGTAATGCCGGCAGCTGAAA 61.312 55.000 35.36 9.43 44.23 2.69
105 106 1.748879 GGTAATGCCGGCAGCTGAA 60.749 57.895 35.36 14.76 44.23 3.02
106 107 2.124736 GGTAATGCCGGCAGCTGA 60.125 61.111 35.36 16.52 44.23 4.26
107 108 3.211963 GGGTAATGCCGGCAGCTG 61.212 66.667 35.36 10.11 44.23 4.24
108 109 4.506255 GGGGTAATGCCGGCAGCT 62.506 66.667 35.36 25.53 44.23 4.24
109 110 4.506255 AGGGGTAATGCCGGCAGC 62.506 66.667 35.36 25.04 44.14 5.25
110 111 2.203209 GAGGGGTAATGCCGGCAG 60.203 66.667 35.36 0.00 38.44 4.85
111 112 2.265467 GAAGAGGGGTAATGCCGGCA 62.265 60.000 34.80 34.80 38.44 5.69
112 113 1.526225 GAAGAGGGGTAATGCCGGC 60.526 63.158 22.73 22.73 38.44 6.13
113 114 0.474184 ATGAAGAGGGGTAATGCCGG 59.526 55.000 0.00 0.00 38.44 6.13
114 115 1.597742 CATGAAGAGGGGTAATGCCG 58.402 55.000 0.00 0.00 38.44 5.69
115 116 1.215423 ACCATGAAGAGGGGTAATGCC 59.785 52.381 0.00 0.00 31.89 4.40
116 117 2.736670 ACCATGAAGAGGGGTAATGC 57.263 50.000 0.00 0.00 31.89 3.56
117 118 4.887655 GGTTTACCATGAAGAGGGGTAATG 59.112 45.833 0.00 0.00 44.25 1.90
118 119 4.794067 AGGTTTACCATGAAGAGGGGTAAT 59.206 41.667 1.13 0.00 44.25 1.89
119 120 4.180723 AGGTTTACCATGAAGAGGGGTAA 58.819 43.478 1.13 0.00 43.45 2.85
120 121 3.810623 AGGTTTACCATGAAGAGGGGTA 58.189 45.455 1.13 0.00 38.89 3.69
121 122 2.644151 AGGTTTACCATGAAGAGGGGT 58.356 47.619 1.13 0.00 38.89 4.95
122 123 3.245264 ACAAGGTTTACCATGAAGAGGGG 60.245 47.826 10.82 0.00 38.06 4.79
123 124 4.034285 ACAAGGTTTACCATGAAGAGGG 57.966 45.455 10.82 0.00 38.06 4.30
124 125 7.519032 TTTTACAAGGTTTACCATGAAGAGG 57.481 36.000 10.82 0.00 38.06 3.69
137 138 9.397280 GGCTATTCTCTCTTATTTTACAAGGTT 57.603 33.333 0.00 0.00 0.00 3.50
138 139 8.548877 TGGCTATTCTCTCTTATTTTACAAGGT 58.451 33.333 0.00 0.00 0.00 3.50
139 140 8.964476 TGGCTATTCTCTCTTATTTTACAAGG 57.036 34.615 0.00 0.00 0.00 3.61
150 151 9.373450 TCTCAATACTTATGGCTATTCTCTCTT 57.627 33.333 0.00 0.00 0.00 2.85
151 152 8.948401 TCTCAATACTTATGGCTATTCTCTCT 57.052 34.615 0.00 0.00 0.00 3.10
179 180 9.579932 TGCATTATGGGATGTTATTACACATTA 57.420 29.630 0.00 0.00 37.52 1.90
180 181 8.476064 TGCATTATGGGATGTTATTACACATT 57.524 30.769 0.00 0.00 37.52 2.71
181 182 8.476064 TTGCATTATGGGATGTTATTACACAT 57.524 30.769 0.00 0.00 40.25 3.21
182 183 7.888250 TTGCATTATGGGATGTTATTACACA 57.112 32.000 0.00 0.00 37.03 3.72
213 214 9.047371 CCATTTTGCATCATGCTTTTATATCAA 57.953 29.630 11.84 0.00 45.31 2.57
214 215 8.422566 TCCATTTTGCATCATGCTTTTATATCA 58.577 29.630 11.84 0.00 45.31 2.15
215 216 8.706035 GTCCATTTTGCATCATGCTTTTATATC 58.294 33.333 11.84 0.00 45.31 1.63
216 217 7.383029 CGTCCATTTTGCATCATGCTTTTATAT 59.617 33.333 11.84 0.00 45.31 0.86
217 218 6.696583 CGTCCATTTTGCATCATGCTTTTATA 59.303 34.615 11.84 0.00 45.31 0.98
218 219 5.521010 CGTCCATTTTGCATCATGCTTTTAT 59.479 36.000 11.84 0.00 45.31 1.40
219 220 4.863689 CGTCCATTTTGCATCATGCTTTTA 59.136 37.500 11.84 0.00 45.31 1.52
220 221 3.680937 CGTCCATTTTGCATCATGCTTTT 59.319 39.130 11.84 0.00 45.31 2.27
221 222 3.255725 CGTCCATTTTGCATCATGCTTT 58.744 40.909 11.84 0.00 45.31 3.51
222 223 2.231964 ACGTCCATTTTGCATCATGCTT 59.768 40.909 11.84 0.00 45.31 3.91
223 224 1.820519 ACGTCCATTTTGCATCATGCT 59.179 42.857 11.84 0.00 45.31 3.79
224 225 2.282701 ACGTCCATTTTGCATCATGC 57.717 45.000 1.35 1.35 45.29 4.06
225 226 5.172460 TGATACGTCCATTTTGCATCATG 57.828 39.130 0.00 0.00 0.00 3.07
226 227 4.276678 CCTGATACGTCCATTTTGCATCAT 59.723 41.667 0.00 0.00 0.00 2.45
227 228 3.627123 CCTGATACGTCCATTTTGCATCA 59.373 43.478 0.00 0.00 0.00 3.07
228 229 3.548818 GCCTGATACGTCCATTTTGCATC 60.549 47.826 0.00 0.00 0.00 3.91
229 230 2.358898 GCCTGATACGTCCATTTTGCAT 59.641 45.455 0.00 0.00 0.00 3.96
230 231 1.742831 GCCTGATACGTCCATTTTGCA 59.257 47.619 0.00 0.00 0.00 4.08
231 232 1.268032 CGCCTGATACGTCCATTTTGC 60.268 52.381 0.00 0.00 0.00 3.68
232 233 1.268032 GCGCCTGATACGTCCATTTTG 60.268 52.381 0.00 0.00 0.00 2.44
233 234 1.014352 GCGCCTGATACGTCCATTTT 58.986 50.000 0.00 0.00 0.00 1.82
234 235 0.814010 GGCGCCTGATACGTCCATTT 60.814 55.000 22.15 0.00 0.00 2.32
235 236 1.227556 GGCGCCTGATACGTCCATT 60.228 57.895 22.15 0.00 0.00 3.16
236 237 2.421739 GGCGCCTGATACGTCCAT 59.578 61.111 22.15 0.00 0.00 3.41
237 238 4.201679 CGGCGCCTGATACGTCCA 62.202 66.667 26.68 0.00 0.00 4.02
238 239 4.203076 ACGGCGCCTGATACGTCC 62.203 66.667 26.68 0.00 33.92 4.79
239 240 2.654404 GACGGCGCCTGATACGTC 60.654 66.667 26.68 20.84 46.89 4.34
240 241 3.138798 AGACGGCGCCTGATACGT 61.139 61.111 26.68 16.31 42.88 3.57
241 242 2.655364 CAGACGGCGCCTGATACG 60.655 66.667 26.68 12.71 33.65 3.06
242 243 2.279517 CCAGACGGCGCCTGATAC 60.280 66.667 24.98 10.75 33.65 2.24
261 262 4.593864 GATCGAGACCAGGCGGGC 62.594 72.222 2.69 0.00 43.02 6.13
262 263 4.271816 CGATCGAGACCAGGCGGG 62.272 72.222 10.26 0.79 44.81 6.13
263 264 3.471244 GACGATCGAGACCAGGCGG 62.471 68.421 24.34 0.00 38.77 6.13
264 265 2.024871 GACGATCGAGACCAGGCG 59.975 66.667 24.34 0.00 0.00 5.52
265 266 0.596083 CATGACGATCGAGACCAGGC 60.596 60.000 24.34 0.00 0.00 4.85
266 267 0.031314 CCATGACGATCGAGACCAGG 59.969 60.000 24.34 14.27 0.00 4.45
267 268 0.031314 CCCATGACGATCGAGACCAG 59.969 60.000 24.34 5.51 0.00 4.00
268 269 1.391933 CCCCATGACGATCGAGACCA 61.392 60.000 24.34 13.64 0.00 4.02
269 270 1.364171 CCCCATGACGATCGAGACC 59.636 63.158 24.34 8.26 0.00 3.85
270 271 1.267261 CTACCCCATGACGATCGAGAC 59.733 57.143 24.34 12.85 0.00 3.36
271 272 1.605753 CTACCCCATGACGATCGAGA 58.394 55.000 24.34 7.76 0.00 4.04
272 273 0.598562 CCTACCCCATGACGATCGAG 59.401 60.000 24.34 4.83 0.00 4.04
273 274 1.461091 GCCTACCCCATGACGATCGA 61.461 60.000 24.34 0.00 0.00 3.59
274 275 1.006102 GCCTACCCCATGACGATCG 60.006 63.158 14.88 14.88 0.00 3.69
275 276 0.318762 GAGCCTACCCCATGACGATC 59.681 60.000 0.00 0.00 0.00 3.69
276 277 1.464376 CGAGCCTACCCCATGACGAT 61.464 60.000 0.00 0.00 0.00 3.73
277 278 2.125326 CGAGCCTACCCCATGACGA 61.125 63.158 0.00 0.00 0.00 4.20
278 279 2.076622 CTCGAGCCTACCCCATGACG 62.077 65.000 0.00 0.00 0.00 4.35
279 280 1.043673 ACTCGAGCCTACCCCATGAC 61.044 60.000 13.61 0.00 0.00 3.06
280 281 0.325296 AACTCGAGCCTACCCCATGA 60.325 55.000 13.61 0.00 0.00 3.07
281 282 0.541863 AAACTCGAGCCTACCCCATG 59.458 55.000 13.61 0.00 0.00 3.66
282 283 1.761198 GTAAACTCGAGCCTACCCCAT 59.239 52.381 13.61 0.00 0.00 4.00
283 284 1.188863 GTAAACTCGAGCCTACCCCA 58.811 55.000 13.61 0.00 0.00 4.96
284 285 0.101939 CGTAAACTCGAGCCTACCCC 59.898 60.000 13.61 0.00 0.00 4.95
285 286 0.813821 ACGTAAACTCGAGCCTACCC 59.186 55.000 13.61 0.00 34.70 3.69
286 287 1.905449 CACGTAAACTCGAGCCTACC 58.095 55.000 13.61 0.00 34.70 3.18
287 288 1.266466 GCACGTAAACTCGAGCCTAC 58.734 55.000 13.61 12.86 40.36 3.18
288 289 0.883153 TGCACGTAAACTCGAGCCTA 59.117 50.000 13.61 0.61 44.12 3.93
289 290 0.032952 TTGCACGTAAACTCGAGCCT 59.967 50.000 13.61 1.73 44.12 4.58
293 294 2.475818 ACACATTGCACGTAAACTCGA 58.524 42.857 0.00 0.00 34.70 4.04
300 301 4.565166 GTCATAGCTTACACATTGCACGTA 59.435 41.667 0.00 0.00 0.00 3.57
310 311 8.630917 TCACTTCTAATAGGTCATAGCTTACAC 58.369 37.037 0.00 0.00 0.00 2.90
468 471 5.930837 ACCAAACAACAAATGGAGAAGAA 57.069 34.783 0.00 0.00 37.66 2.52
555 591 9.352784 CTTGAAAAGTGTTGAACAAGTATTTGA 57.647 29.630 0.00 0.00 39.70 2.69
556 592 9.352784 TCTTGAAAAGTGTTGAACAAGTATTTG 57.647 29.630 0.00 0.00 46.34 2.32
558 594 9.520204 CATCTTGAAAAGTGTTGAACAAGTATT 57.480 29.630 0.00 0.00 46.34 1.89
560 596 7.416213 CCCATCTTGAAAAGTGTTGAACAAGTA 60.416 37.037 0.00 0.00 46.34 2.24
561 597 6.332630 CCATCTTGAAAAGTGTTGAACAAGT 58.667 36.000 0.00 0.00 46.34 3.16
562 598 5.750067 CCCATCTTGAAAAGTGTTGAACAAG 59.250 40.000 0.00 0.00 46.34 3.16
563 599 5.659463 CCCATCTTGAAAAGTGTTGAACAA 58.341 37.500 0.00 0.00 46.34 2.83
564 600 4.441356 GCCCATCTTGAAAAGTGTTGAACA 60.441 41.667 0.00 0.00 46.34 3.18
565 601 4.051237 GCCCATCTTGAAAAGTGTTGAAC 58.949 43.478 0.00 0.00 46.34 3.18
607 643 2.868196 CTCCACTTCTCGCGTCGA 59.132 61.111 5.77 0.63 0.00 4.20
609 645 1.515304 GAGCTCCACTTCTCGCGTC 60.515 63.158 5.77 0.00 0.00 5.19
610 646 2.569134 GAGCTCCACTTCTCGCGT 59.431 61.111 5.77 0.00 0.00 6.01
615 651 1.589113 GTGCTCGAGCTCCACTTCT 59.411 57.895 35.27 0.00 42.66 2.85
622 658 2.527951 AATGTGGGGTGCTCGAGCTC 62.528 60.000 35.27 31.07 42.66 4.09
638 692 3.539791 GCGGCCCAATCCCCAATG 61.540 66.667 0.00 0.00 0.00 2.82
711 819 2.660064 GGCGTGAGAGATGGTGGGT 61.660 63.158 0.00 0.00 0.00 4.51
1008 1148 2.029844 GAACGGTCCAGTGAGCTGC 61.030 63.158 0.00 0.00 41.26 5.25
1026 1166 2.159156 TGAGAACGGGGACATGATTACG 60.159 50.000 0.00 1.16 0.00 3.18
1242 1382 3.057386 CAGGCATGCAACTTTATCACACA 60.057 43.478 21.36 0.00 0.00 3.72
1260 1400 4.276460 CGTAACAAAGTTTACACACAGGC 58.724 43.478 0.00 0.00 32.32 4.85
1274 1414 7.172532 GCTACCATATCATGATTCCGTAACAAA 59.827 37.037 14.65 0.00 0.00 2.83
1518 1832 1.004044 AGTGATGCAACTGGGAAGAGG 59.996 52.381 0.00 0.00 0.00 3.69
1731 2045 6.535150 GCATACAGCAGACATGAAACTAACTA 59.465 38.462 0.00 0.00 44.79 2.24
1771 2085 6.223120 AGTTATTCCAAAATGAAACAGGTGC 58.777 36.000 0.00 0.00 0.00 5.01
1773 2087 6.705825 GCAAGTTATTCCAAAATGAAACAGGT 59.294 34.615 0.00 0.00 0.00 4.00
1799 2113 6.547141 ACATCTTGGACTTTTCAACAGATGAA 59.453 34.615 12.11 0.00 46.22 2.57
1860 2174 4.081087 GCTAATCTGTCCAAAGTGTAGGGA 60.081 45.833 0.00 0.00 0.00 4.20
1958 2272 9.090692 GATGCAAAACATAACATTTTCTAGCAT 57.909 29.630 0.00 0.00 39.84 3.79
2005 2319 3.533606 AATCAGGATCGGTCAGTTCAG 57.466 47.619 0.00 0.00 0.00 3.02
2025 2339 2.054799 ACCCTCAGCACTTTGACCTAA 58.945 47.619 0.00 0.00 0.00 2.69
2057 2371 9.498176 TTCATATCAGATTGTTGTCCATCATAG 57.502 33.333 0.00 0.00 0.00 2.23
2321 2635 7.600375 CGATATGCAAGTCCAGTTAATCTACAT 59.400 37.037 0.00 0.00 0.00 2.29
2665 3059 2.821969 ACATTGCAAGATGAGGGTTGTC 59.178 45.455 4.94 0.00 0.00 3.18
2940 3335 2.180769 GTTTGCGGGAATTCGGGC 59.819 61.111 11.25 11.25 0.00 6.13
3025 3420 2.033602 GGGAGACGGTTTGGTGGG 59.966 66.667 0.00 0.00 0.00 4.61
3073 3475 2.743928 CTGGAGCGGCTGACCAAC 60.744 66.667 7.50 0.00 34.57 3.77
3074 3476 2.922503 TCTGGAGCGGCTGACCAA 60.923 61.111 7.50 0.00 34.57 3.67
3097 3499 1.726248 CATCAATGTCGTCGAGTTGCA 59.274 47.619 12.97 1.38 0.00 4.08
3138 3543 0.179000 ATCAAGGCCATCGAGTCACC 59.821 55.000 5.01 0.00 0.00 4.02
3140 3545 1.833630 AGAATCAAGGCCATCGAGTCA 59.166 47.619 5.01 0.00 0.00 3.41
3154 3559 2.029918 CACGTCACTCTGACCAGAATCA 60.030 50.000 1.08 0.00 44.20 2.57
3177 3582 4.135153 CGCCACTCTCCCGTCTGG 62.135 72.222 0.00 0.00 0.00 3.86
3215 3620 2.119886 CCGGACTAGGCTTCTCAGG 58.880 63.158 0.00 0.00 0.00 3.86
3240 3645 0.438830 GACACCGCTTCAATGTCGTC 59.561 55.000 0.00 0.00 33.94 4.20
3244 3649 1.512926 GAGTGACACCGCTTCAATGT 58.487 50.000 0.84 0.00 32.40 2.71
3321 3726 1.743252 GGGTTTGCAGAGAGGAGCG 60.743 63.158 0.00 0.00 0.00 5.03
3481 3886 4.724074 ACCGGACGATATTTTGTCTGTA 57.276 40.909 9.46 0.00 39.97 2.74
3601 4006 1.301087 CGTGTGCCCTAAACGTCCA 60.301 57.895 0.00 0.00 32.79 4.02
3652 4057 1.364171 GCACTATCCGTCCGCAGAT 59.636 57.895 0.00 0.00 0.00 2.90
3702 4109 8.037758 GCACTATGATAAATCTAGGCACACTAT 58.962 37.037 0.00 0.00 0.00 2.12
3722 4129 4.402528 TTGCGGGGCGTGCACTAT 62.403 61.111 16.19 0.00 43.10 2.12
3729 4136 2.437716 CCATAAGTTGCGGGGCGT 60.438 61.111 0.00 0.00 0.00 5.68
3730 4137 2.437716 ACCATAAGTTGCGGGGCG 60.438 61.111 0.00 0.00 0.00 6.13
3732 4139 0.106719 ATCCACCATAAGTTGCGGGG 60.107 55.000 0.00 0.00 0.00 5.73
3905 4373 7.309377 CCACAACATGATGTCCAATCTAACTTT 60.309 37.037 5.51 0.00 0.00 2.66
3974 4442 6.045318 ACAGTGTATGCTGCTAGTTCTAATG 58.955 40.000 0.00 0.00 39.96 1.90
3975 4443 6.227298 ACAGTGTATGCTGCTAGTTCTAAT 57.773 37.500 0.00 0.00 39.96 1.73
4016 4487 3.529634 TGAGAAACATGTAAAACGGCG 57.470 42.857 4.80 4.80 0.00 6.46
4115 4586 3.123804 GCGCAGGAATTCTTCTCGATAA 58.876 45.455 0.30 0.00 0.00 1.75
4503 4977 2.457366 ACTGTAAGCTTTCCACGGAG 57.543 50.000 3.20 0.00 37.60 4.63
4555 5030 7.122948 ACAGGTTTTACAGGTGTTTACATTCAA 59.877 33.333 0.00 0.00 0.00 2.69
4569 5044 6.861055 ACATAATCGCAAAACAGGTTTTACAG 59.139 34.615 9.59 5.22 40.45 2.74
4585 5060 6.369065 CCCTGGAGAAAATAGTACATAATCGC 59.631 42.308 0.00 0.00 0.00 4.58
4591 5066 4.721776 TCAGCCCTGGAGAAAATAGTACAT 59.278 41.667 0.00 0.00 0.00 2.29
4595 5070 3.782523 TGATCAGCCCTGGAGAAAATAGT 59.217 43.478 0.00 0.00 0.00 2.12
4602 5080 2.848694 AGAAAATGATCAGCCCTGGAGA 59.151 45.455 0.09 0.00 0.00 3.71
4603 5081 3.294038 AGAAAATGATCAGCCCTGGAG 57.706 47.619 0.09 0.00 0.00 3.86
4606 5084 4.015084 ACTGAAGAAAATGATCAGCCCTG 58.985 43.478 0.09 0.00 43.41 4.45
4609 5087 6.073873 CGATCTACTGAAGAAAATGATCAGCC 60.074 42.308 0.09 0.00 43.41 4.85
4611 5089 6.073873 GGCGATCTACTGAAGAAAATGATCAG 60.074 42.308 0.09 0.00 44.77 2.90
4631 5109 6.122277 TGAGAATTGGAGAATTTTAGGCGAT 58.878 36.000 0.00 0.00 31.58 4.58
4632 5110 5.496556 TGAGAATTGGAGAATTTTAGGCGA 58.503 37.500 0.00 0.00 31.58 5.54
4707 5207 0.468029 CCCACACAGTGCTCCCTTTT 60.468 55.000 0.00 0.00 31.34 2.27
4715 5215 0.530288 AAACAACACCCACACAGTGC 59.470 50.000 0.00 0.00 38.87 4.40
4720 5220 1.336755 CTAGCCAAACAACACCCACAC 59.663 52.381 0.00 0.00 0.00 3.82
4783 5284 8.697846 AATATTTCATTGCAAGACATGAGTTG 57.302 30.769 4.94 3.46 0.00 3.16
4864 5368 7.173907 CAGAACCAGAAACAAAGATCAGTATGT 59.826 37.037 0.00 0.00 37.40 2.29
4869 5373 4.823989 ACCAGAACCAGAAACAAAGATCAG 59.176 41.667 0.00 0.00 0.00 2.90
4914 5418 1.668826 AGATGCACCCCCAGTTTCTA 58.331 50.000 0.00 0.00 0.00 2.10
4924 5428 1.749334 CGGAGGGAGTAGATGCACCC 61.749 65.000 0.00 0.00 42.36 4.61
4930 5434 1.528776 GCGGACGGAGGGAGTAGAT 60.529 63.158 0.00 0.00 0.00 1.98
4936 5440 1.731433 CTTATTCGCGGACGGAGGGA 61.731 60.000 6.13 0.00 40.63 4.20
4937 5441 1.299926 CTTATTCGCGGACGGAGGG 60.300 63.158 6.13 0.00 40.63 4.30
4938 5442 0.870307 CACTTATTCGCGGACGGAGG 60.870 60.000 6.13 0.00 40.63 4.30
4939 5443 0.179145 ACACTTATTCGCGGACGGAG 60.179 55.000 6.13 0.00 40.63 4.63
4940 5444 1.093972 TACACTTATTCGCGGACGGA 58.906 50.000 6.13 0.00 40.63 4.69
4941 5445 1.194495 GTACACTTATTCGCGGACGG 58.806 55.000 6.13 0.00 40.63 4.79
4942 5446 2.184385 AGTACACTTATTCGCGGACG 57.816 50.000 6.13 0.00 42.01 4.79
4943 5447 3.767278 AGAAGTACACTTATTCGCGGAC 58.233 45.455 6.13 0.00 36.11 4.79
4944 5448 4.201950 GGTAGAAGTACACTTATTCGCGGA 60.202 45.833 6.13 0.00 36.11 5.54
4945 5449 4.040376 GGTAGAAGTACACTTATTCGCGG 58.960 47.826 6.13 0.00 36.11 6.46
4946 5450 4.665212 TGGTAGAAGTACACTTATTCGCG 58.335 43.478 0.00 0.00 36.11 5.87
4947 5451 7.535489 AAATGGTAGAAGTACACTTATTCGC 57.465 36.000 0.00 0.00 36.11 4.70
4992 5496 9.586435 CTCTTTTCTAACAAGTTGGTCAAAATT 57.414 29.630 7.96 0.00 0.00 1.82
4993 5497 8.749354 ACTCTTTTCTAACAAGTTGGTCAAAAT 58.251 29.630 7.96 0.00 0.00 1.82
4994 5498 8.117813 ACTCTTTTCTAACAAGTTGGTCAAAA 57.882 30.769 7.96 8.79 0.00 2.44
4995 5499 7.696992 ACTCTTTTCTAACAAGTTGGTCAAA 57.303 32.000 7.96 0.94 0.00 2.69
4996 5500 8.044908 ACTACTCTTTTCTAACAAGTTGGTCAA 58.955 33.333 7.96 0.00 0.00 3.18
4997 5501 7.562135 ACTACTCTTTTCTAACAAGTTGGTCA 58.438 34.615 7.96 0.00 0.00 4.02
4998 5502 9.194271 CTACTACTCTTTTCTAACAAGTTGGTC 57.806 37.037 7.96 0.00 0.00 4.02
4999 5503 8.148999 CCTACTACTCTTTTCTAACAAGTTGGT 58.851 37.037 7.96 2.53 0.00 3.67
5000 5504 8.148999 ACCTACTACTCTTTTCTAACAAGTTGG 58.851 37.037 7.96 0.00 35.58 3.77
5001 5505 9.543783 AACCTACTACTCTTTTCTAACAAGTTG 57.456 33.333 0.00 0.00 0.00 3.16
5020 5524 9.920946 ACCAATTTGATGTCATATAAACCTACT 57.079 29.630 0.00 0.00 0.00 2.57
5082 5586 9.801873 GCACCATTTATGACACAAAATTAGTAT 57.198 29.630 0.00 0.00 0.00 2.12
5083 5587 9.019656 AGCACCATTTATGACACAAAATTAGTA 57.980 29.630 0.00 0.00 0.00 1.82
5084 5588 7.895759 AGCACCATTTATGACACAAAATTAGT 58.104 30.769 0.00 0.00 0.00 2.24
5085 5589 9.289303 GTAGCACCATTTATGACACAAAATTAG 57.711 33.333 0.00 0.00 0.00 1.73
5086 5590 9.019656 AGTAGCACCATTTATGACACAAAATTA 57.980 29.630 0.00 0.00 0.00 1.40
5087 5591 7.895759 AGTAGCACCATTTATGACACAAAATT 58.104 30.769 0.00 0.00 0.00 1.82
5088 5592 7.466746 AGTAGCACCATTTATGACACAAAAT 57.533 32.000 0.00 0.00 0.00 1.82
5089 5593 6.892658 AGTAGCACCATTTATGACACAAAA 57.107 33.333 0.00 0.00 0.00 2.44
5090 5594 6.892658 AAGTAGCACCATTTATGACACAAA 57.107 33.333 0.00 0.00 0.00 2.83
5091 5595 6.892658 AAAGTAGCACCATTTATGACACAA 57.107 33.333 0.00 0.00 0.00 3.33
5092 5596 6.892658 AAAAGTAGCACCATTTATGACACA 57.107 33.333 0.00 0.00 0.00 3.72
5093 5597 7.120726 AGGTAAAAGTAGCACCATTTATGACAC 59.879 37.037 0.00 0.00 34.62 3.67
5094 5598 7.172342 AGGTAAAAGTAGCACCATTTATGACA 58.828 34.615 0.00 0.00 34.62 3.58
5095 5599 7.625828 AGGTAAAAGTAGCACCATTTATGAC 57.374 36.000 0.00 0.00 34.62 3.06
5100 5604 9.749340 ACTTTATAGGTAAAAGTAGCACCATTT 57.251 29.630 0.00 0.00 43.54 2.32
5101 5605 9.749340 AACTTTATAGGTAAAAGTAGCACCATT 57.251 29.630 1.96 0.00 44.35 3.16
5102 5606 9.174166 CAACTTTATAGGTAAAAGTAGCACCAT 57.826 33.333 1.96 0.00 44.35 3.55
5103 5607 7.608761 CCAACTTTATAGGTAAAAGTAGCACCA 59.391 37.037 1.96 0.00 44.35 4.17
5104 5608 7.609146 ACCAACTTTATAGGTAAAAGTAGCACC 59.391 37.037 1.96 0.00 44.35 5.01
5105 5609 8.557592 ACCAACTTTATAGGTAAAAGTAGCAC 57.442 34.615 1.96 0.00 44.35 4.40
5106 5610 8.377034 TGACCAACTTTATAGGTAAAAGTAGCA 58.623 33.333 1.96 0.00 44.35 3.49
5107 5611 8.782339 TGACCAACTTTATAGGTAAAAGTAGC 57.218 34.615 1.96 0.00 44.35 3.58
5114 5618 9.629878 TGAAACTTTGACCAACTTTATAGGTAA 57.370 29.630 0.00 0.00 35.36 2.85
5115 5619 9.629878 TTGAAACTTTGACCAACTTTATAGGTA 57.370 29.630 0.00 0.00 35.36 3.08
5116 5620 8.528044 TTGAAACTTTGACCAACTTTATAGGT 57.472 30.769 0.00 0.00 38.63 3.08
5117 5621 9.810545 TTTTGAAACTTTGACCAACTTTATAGG 57.189 29.630 0.00 0.00 0.00 2.57
5137 5641 8.921670 GCTTTTGTTCTAACTCAAAGTTTTGAA 58.078 29.630 8.48 1.77 45.61 2.69
5138 5642 8.303876 AGCTTTTGTTCTAACTCAAAGTTTTGA 58.696 29.630 7.06 7.06 44.31 2.69
5139 5643 8.466086 AGCTTTTGTTCTAACTCAAAGTTTTG 57.534 30.769 14.34 0.00 39.51 2.44
5140 5644 9.788960 CTAGCTTTTGTTCTAACTCAAAGTTTT 57.211 29.630 0.00 7.66 39.51 2.43
5141 5645 9.174166 TCTAGCTTTTGTTCTAACTCAAAGTTT 57.826 29.630 0.00 0.00 39.51 2.66
5142 5646 8.732746 TCTAGCTTTTGTTCTAACTCAAAGTT 57.267 30.769 0.00 12.26 41.97 2.66
5143 5647 8.778358 CATCTAGCTTTTGTTCTAACTCAAAGT 58.222 33.333 0.00 8.02 35.47 2.66
5144 5648 8.778358 ACATCTAGCTTTTGTTCTAACTCAAAG 58.222 33.333 0.00 11.01 35.47 2.77
5145 5649 8.677148 ACATCTAGCTTTTGTTCTAACTCAAA 57.323 30.769 0.00 0.00 32.75 2.69
5146 5650 9.204570 GTACATCTAGCTTTTGTTCTAACTCAA 57.795 33.333 0.00 0.00 0.00 3.02
5147 5651 8.364894 TGTACATCTAGCTTTTGTTCTAACTCA 58.635 33.333 0.00 0.00 0.00 3.41
5148 5652 8.648968 GTGTACATCTAGCTTTTGTTCTAACTC 58.351 37.037 0.00 0.00 0.00 3.01
5149 5653 8.368668 AGTGTACATCTAGCTTTTGTTCTAACT 58.631 33.333 0.00 0.00 0.00 2.24
5150 5654 8.535690 AGTGTACATCTAGCTTTTGTTCTAAC 57.464 34.615 0.00 0.00 0.00 2.34
5153 5657 9.726438 AATAAGTGTACATCTAGCTTTTGTTCT 57.274 29.630 0.00 0.00 0.00 3.01
5154 5658 9.974750 GAATAAGTGTACATCTAGCTTTTGTTC 57.025 33.333 0.00 0.63 0.00 3.18
5155 5659 8.656849 CGAATAAGTGTACATCTAGCTTTTGTT 58.343 33.333 0.00 0.00 0.00 2.83
5156 5660 7.201530 GCGAATAAGTGTACATCTAGCTTTTGT 60.202 37.037 0.00 0.00 0.00 2.83
5157 5661 7.119997 GCGAATAAGTGTACATCTAGCTTTTG 58.880 38.462 0.00 0.00 0.00 2.44
5158 5662 6.019801 CGCGAATAAGTGTACATCTAGCTTTT 60.020 38.462 0.00 0.00 0.00 2.27
5159 5663 5.459107 CGCGAATAAGTGTACATCTAGCTTT 59.541 40.000 0.00 0.00 0.00 3.51
5160 5664 4.976731 CGCGAATAAGTGTACATCTAGCTT 59.023 41.667 0.00 0.00 0.00 3.74
5161 5665 4.537965 CGCGAATAAGTGTACATCTAGCT 58.462 43.478 0.00 0.00 0.00 3.32
5162 5666 3.669122 CCGCGAATAAGTGTACATCTAGC 59.331 47.826 8.23 0.00 0.00 3.42
5163 5667 4.910456 GTCCGCGAATAAGTGTACATCTAG 59.090 45.833 8.23 0.00 0.00 2.43
5164 5668 4.553351 CGTCCGCGAATAAGTGTACATCTA 60.553 45.833 8.23 0.00 41.33 1.98
5165 5669 3.703420 GTCCGCGAATAAGTGTACATCT 58.297 45.455 8.23 0.00 0.00 2.90
5166 5670 2.466571 CGTCCGCGAATAAGTGTACATC 59.533 50.000 8.23 0.00 41.33 3.06
5167 5671 2.456989 CGTCCGCGAATAAGTGTACAT 58.543 47.619 8.23 0.00 41.33 2.29
5168 5672 1.467883 CCGTCCGCGAATAAGTGTACA 60.468 52.381 8.23 0.00 41.33 2.90
5169 5673 1.194495 CCGTCCGCGAATAAGTGTAC 58.806 55.000 8.23 0.00 41.33 2.90
5170 5674 1.064505 CTCCGTCCGCGAATAAGTGTA 59.935 52.381 8.23 0.00 41.33 2.90
5171 5675 0.179145 CTCCGTCCGCGAATAAGTGT 60.179 55.000 8.23 0.00 41.33 3.55
5172 5676 0.870307 CCTCCGTCCGCGAATAAGTG 60.870 60.000 8.23 0.00 41.33 3.16
5173 5677 1.436336 CCTCCGTCCGCGAATAAGT 59.564 57.895 8.23 0.00 41.33 2.24
5174 5678 1.299926 CCCTCCGTCCGCGAATAAG 60.300 63.158 8.23 0.00 41.33 1.73
5175 5679 1.731433 CTCCCTCCGTCCGCGAATAA 61.731 60.000 8.23 0.00 41.33 1.40
5176 5680 2.124193 TCCCTCCGTCCGCGAATA 60.124 61.111 8.23 0.00 41.33 1.75
5177 5681 2.898920 TACTCCCTCCGTCCGCGAAT 62.899 60.000 8.23 0.00 41.33 3.34
5178 5682 3.626996 TACTCCCTCCGTCCGCGAA 62.627 63.158 8.23 0.00 41.33 4.70
5179 5683 4.100084 TACTCCCTCCGTCCGCGA 62.100 66.667 8.23 0.00 41.33 5.87
5180 5684 3.885521 GTACTCCCTCCGTCCGCG 61.886 72.222 0.00 0.00 37.95 6.46
5181 5685 2.753043 TGTACTCCCTCCGTCCGC 60.753 66.667 0.00 0.00 0.00 5.54
5182 5686 1.676635 TGTGTACTCCCTCCGTCCG 60.677 63.158 0.00 0.00 0.00 4.79
5183 5687 0.611340 AGTGTGTACTCCCTCCGTCC 60.611 60.000 0.00 0.00 28.79 4.79
5184 5688 2.119801 TAGTGTGTACTCCCTCCGTC 57.880 55.000 0.00 0.00 38.36 4.79
5185 5689 2.444421 CTTAGTGTGTACTCCCTCCGT 58.556 52.381 0.00 0.00 38.36 4.69
5186 5690 1.749634 CCTTAGTGTGTACTCCCTCCG 59.250 57.143 0.00 0.00 38.36 4.63
5187 5691 1.481363 GCCTTAGTGTGTACTCCCTCC 59.519 57.143 0.00 0.00 38.36 4.30
5188 5692 1.134560 CGCCTTAGTGTGTACTCCCTC 59.865 57.143 0.00 0.00 38.36 4.30
5189 5693 1.183549 CGCCTTAGTGTGTACTCCCT 58.816 55.000 0.00 0.00 38.36 4.20
5190 5694 1.135170 GTCGCCTTAGTGTGTACTCCC 60.135 57.143 0.00 0.00 38.36 4.30
5191 5695 1.542915 TGTCGCCTTAGTGTGTACTCC 59.457 52.381 0.00 0.00 38.36 3.85
5192 5696 3.293311 TTGTCGCCTTAGTGTGTACTC 57.707 47.619 0.00 0.00 38.36 2.59
5193 5697 3.069158 AGTTTGTCGCCTTAGTGTGTACT 59.931 43.478 0.00 0.00 40.99 2.73
5194 5698 3.387397 AGTTTGTCGCCTTAGTGTGTAC 58.613 45.455 0.00 0.00 0.00 2.90
5195 5699 3.738830 AGTTTGTCGCCTTAGTGTGTA 57.261 42.857 0.00 0.00 0.00 2.90
5196 5700 2.614829 AGTTTGTCGCCTTAGTGTGT 57.385 45.000 0.00 0.00 0.00 3.72
5197 5701 3.805422 TGTTAGTTTGTCGCCTTAGTGTG 59.195 43.478 0.00 0.00 0.00 3.82
5198 5702 4.062677 TGTTAGTTTGTCGCCTTAGTGT 57.937 40.909 0.00 0.00 0.00 3.55
5229 5734 2.693069 ACTCTGCACGAGAAATGGAAG 58.307 47.619 16.81 0.00 42.62 3.46
5232 5737 3.849911 TCTTACTCTGCACGAGAAATGG 58.150 45.455 16.81 5.64 42.62 3.16
5274 5779 1.131883 CAGTCAGTGCTTGCTAATGCC 59.868 52.381 0.00 0.00 38.71 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.