Multiple sequence alignment - TraesCS4B01G207100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G207100 chr4B 100.000 2816 0 0 801 3616 440927368 440924553 0.000000e+00 5201.0
1 TraesCS4B01G207100 chr4B 100.000 380 0 0 1 380 440928168 440927789 0.000000e+00 702.0
2 TraesCS4B01G207100 chr4B 91.189 227 18 2 1 227 38063262 38063486 1.260000e-79 307.0
3 TraesCS4B01G207100 chr4B 85.714 70 6 1 247 312 440927885 440927816 1.800000e-08 71.3
4 TraesCS4B01G207100 chr4B 85.714 70 6 1 284 353 440927922 440927857 1.800000e-08 71.3
5 TraesCS4B01G207100 chr4B 100.000 30 0 0 3300 3329 197275510 197275481 5.040000e-04 56.5
6 TraesCS4B01G207100 chr4D 92.681 2145 79 30 801 2899 357531589 357529477 0.000000e+00 3020.0
7 TraesCS4B01G207100 chr4D 94.366 71 4 0 3546 3616 357528116 357528046 3.820000e-20 110.0
8 TraesCS4B01G207100 chr4D 93.151 73 1 3 226 294 357533692 357533620 1.780000e-18 104.0
9 TraesCS4B01G207100 chr4D 96.154 52 2 0 284 335 357533671 357533620 6.430000e-13 86.1
10 TraesCS4B01G207100 chr4A 92.756 2126 80 31 823 2898 108369311 108371412 0.000000e+00 3005.0
11 TraesCS4B01G207100 chr4A 90.099 101 6 2 284 380 108368005 108368105 1.050000e-25 128.0
12 TraesCS4B01G207100 chr4A 91.667 72 5 1 3546 3616 108373124 108373195 8.260000e-17 99.0
13 TraesCS4B01G207100 chr4A 94.643 56 3 0 226 281 108367984 108368039 1.790000e-13 87.9
14 TraesCS4B01G207100 chr6B 92.070 227 16 2 1 227 608377373 608377597 5.830000e-83 318.0
15 TraesCS4B01G207100 chr6B 100.000 30 0 0 3300 3329 87396336 87396307 5.040000e-04 56.5
16 TraesCS4B01G207100 chr7B 91.630 227 17 2 1 227 344646707 344646483 2.710000e-81 313.0
17 TraesCS4B01G207100 chr7B 91.189 227 18 2 1 227 501194990 501194766 1.260000e-79 307.0
18 TraesCS4B01G207100 chr3D 91.630 227 17 2 1 227 390579384 390579608 2.710000e-81 313.0
19 TraesCS4B01G207100 chr1B 91.630 227 17 2 1 227 535978867 535978643 2.710000e-81 313.0
20 TraesCS4B01G207100 chr1B 91.630 227 17 2 1 227 536041545 536041321 2.710000e-81 313.0
21 TraesCS4B01G207100 chr1B 91.189 227 18 2 1 227 67781491 67781267 1.260000e-79 307.0
22 TraesCS4B01G207100 chr1B 94.595 37 1 1 3300 3335 549481838 549481802 5.040000e-04 56.5
23 TraesCS4B01G207100 chr1B 100.000 30 0 0 3300 3329 570578573 570578544 5.040000e-04 56.5
24 TraesCS4B01G207100 chr1B 100.000 30 0 0 3300 3329 629503430 629503401 5.040000e-04 56.5
25 TraesCS4B01G207100 chr7D 91.228 228 18 2 1 228 312366251 312366026 3.510000e-80 309.0
26 TraesCS4B01G207100 chr5A 81.467 259 46 2 1306 1563 622224981 622225238 1.020000e-50 211.0
27 TraesCS4B01G207100 chr5A 78.906 256 48 5 1306 1558 622145003 622145255 6.210000e-38 169.0
28 TraesCS4B01G207100 chr5D 80.524 267 38 11 1306 1561 498010470 498010207 3.680000e-45 193.0
29 TraesCS4B01G207100 chr5B 79.923 259 50 2 1306 1563 617284603 617284860 4.770000e-44 189.0
30 TraesCS4B01G207100 chr5B 100.000 30 0 0 3300 3329 160194225 160194254 5.040000e-04 56.5
31 TraesCS4B01G207100 chr5B 100.000 30 0 0 3300 3329 544970256 544970285 5.040000e-04 56.5
32 TraesCS4B01G207100 chr2D 100.000 30 0 0 3300 3329 109906310 109906339 5.040000e-04 56.5
33 TraesCS4B01G207100 chr1A 100.000 30 0 0 3300 3329 200249208 200249237 5.040000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G207100 chr4B 440924553 440928168 3615 True 1511.400 5201 92.85700 1 3616 4 chr4B.!!$R2 3615
1 TraesCS4B01G207100 chr4D 357528046 357533692 5646 True 830.025 3020 94.08800 226 3616 4 chr4D.!!$R1 3390
2 TraesCS4B01G207100 chr4A 108367984 108373195 5211 False 829.975 3005 92.29125 226 3616 4 chr4A.!!$F1 3390

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
277 278 0.036164 TGGTTCAGGATCAACGGTGG 59.964 55.0 0.00 0.0 0.00 4.61 F
294 295 0.036732 TGGGCTTCGAGCAAATCAGT 59.963 50.0 8.71 0.0 44.75 3.41 F
1624 4785 0.248907 CCGGTGTGCACGGTAGATAG 60.249 60.0 13.13 0.0 46.03 2.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2089 5251 0.036952 CTCCATTGACGCTCACCTGT 60.037 55.000 0.00 0.0 0.0 4.00 R
2239 5401 9.947669 GACACTAGATCACGTGTATAAACTAAT 57.052 33.333 16.51 0.0 43.8 1.73 R
2930 6115 0.032403 TGCCAGCAAACATTCAGCAC 59.968 50.000 0.00 0.0 0.0 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.062065 TGGTTTATTGGTTCTCATTGTAATCC 57.938 34.615 0.00 0.00 0.00 3.01
26 27 7.148154 TGGTTTATTGGTTCTCATTGTAATCCG 60.148 37.037 0.00 0.00 0.00 4.18
27 28 7.148137 GGTTTATTGGTTCTCATTGTAATCCGT 60.148 37.037 0.00 0.00 0.00 4.69
28 29 5.818136 ATTGGTTCTCATTGTAATCCGTG 57.182 39.130 0.00 0.00 0.00 4.94
29 30 4.280436 TGGTTCTCATTGTAATCCGTGT 57.720 40.909 0.00 0.00 0.00 4.49
30 31 4.647611 TGGTTCTCATTGTAATCCGTGTT 58.352 39.130 0.00 0.00 0.00 3.32
31 32 5.795972 TGGTTCTCATTGTAATCCGTGTTA 58.204 37.500 0.00 0.00 0.00 2.41
32 33 6.231951 TGGTTCTCATTGTAATCCGTGTTAA 58.768 36.000 0.00 0.00 0.00 2.01
33 34 6.711194 TGGTTCTCATTGTAATCCGTGTTAAA 59.289 34.615 0.00 0.00 0.00 1.52
34 35 7.392113 TGGTTCTCATTGTAATCCGTGTTAAAT 59.608 33.333 0.00 0.00 0.00 1.40
35 36 8.241367 GGTTCTCATTGTAATCCGTGTTAAATT 58.759 33.333 0.00 0.00 0.00 1.82
36 37 9.620660 GTTCTCATTGTAATCCGTGTTAAATTT 57.379 29.630 0.00 0.00 0.00 1.82
38 39 9.619316 TCTCATTGTAATCCGTGTTAAATTTTG 57.381 29.630 0.00 0.00 0.00 2.44
39 40 9.619316 CTCATTGTAATCCGTGTTAAATTTTGA 57.381 29.630 0.00 0.00 0.00 2.69
40 41 9.400638 TCATTGTAATCCGTGTTAAATTTTGAC 57.599 29.630 0.00 0.00 0.00 3.18
41 42 8.643752 CATTGTAATCCGTGTTAAATTTTGACC 58.356 33.333 0.00 0.00 0.00 4.02
42 43 7.273320 TGTAATCCGTGTTAAATTTTGACCA 57.727 32.000 0.00 0.00 0.00 4.02
43 44 7.887381 TGTAATCCGTGTTAAATTTTGACCAT 58.113 30.769 0.00 0.00 0.00 3.55
44 45 9.011095 TGTAATCCGTGTTAAATTTTGACCATA 57.989 29.630 0.00 0.00 0.00 2.74
45 46 9.843334 GTAATCCGTGTTAAATTTTGACCATAA 57.157 29.630 0.00 0.00 0.00 1.90
47 48 9.936759 AATCCGTGTTAAATTTTGACCATAAAT 57.063 25.926 0.00 0.00 0.00 1.40
48 49 9.936759 ATCCGTGTTAAATTTTGACCATAAATT 57.063 25.926 0.00 0.00 36.91 1.82
49 50 9.765795 TCCGTGTTAAATTTTGACCATAAATTT 57.234 25.926 0.00 10.14 43.67 1.82
75 76 7.643569 ACTAATGGAATGTTTATGCATGTCA 57.356 32.000 10.16 6.12 0.00 3.58
76 77 7.483307 ACTAATGGAATGTTTATGCATGTCAC 58.517 34.615 10.16 3.61 0.00 3.67
77 78 4.717233 TGGAATGTTTATGCATGTCACC 57.283 40.909 10.16 4.50 0.00 4.02
78 79 4.085009 TGGAATGTTTATGCATGTCACCA 58.915 39.130 10.16 7.01 0.00 4.17
79 80 4.525874 TGGAATGTTTATGCATGTCACCAA 59.474 37.500 10.16 0.00 0.00 3.67
80 81 5.011431 TGGAATGTTTATGCATGTCACCAAA 59.989 36.000 10.16 0.00 0.00 3.28
81 82 5.931146 GGAATGTTTATGCATGTCACCAAAA 59.069 36.000 10.16 0.00 0.00 2.44
82 83 6.426328 GGAATGTTTATGCATGTCACCAAAAA 59.574 34.615 10.16 0.00 0.00 1.94
83 84 7.119553 GGAATGTTTATGCATGTCACCAAAAAT 59.880 33.333 10.16 0.00 0.00 1.82
84 85 7.982761 ATGTTTATGCATGTCACCAAAAATT 57.017 28.000 10.16 0.00 0.00 1.82
85 86 7.418840 TGTTTATGCATGTCACCAAAAATTC 57.581 32.000 10.16 0.00 0.00 2.17
86 87 7.215789 TGTTTATGCATGTCACCAAAAATTCT 58.784 30.769 10.16 0.00 0.00 2.40
87 88 8.363390 TGTTTATGCATGTCACCAAAAATTCTA 58.637 29.630 10.16 0.00 0.00 2.10
88 89 9.369904 GTTTATGCATGTCACCAAAAATTCTAT 57.630 29.630 10.16 0.00 0.00 1.98
89 90 9.585099 TTTATGCATGTCACCAAAAATTCTATC 57.415 29.630 10.16 0.00 0.00 2.08
90 91 6.587206 TGCATGTCACCAAAAATTCTATCA 57.413 33.333 0.00 0.00 0.00 2.15
91 92 7.172868 TGCATGTCACCAAAAATTCTATCAT 57.827 32.000 0.00 0.00 0.00 2.45
92 93 7.613585 TGCATGTCACCAAAAATTCTATCATT 58.386 30.769 0.00 0.00 0.00 2.57
93 94 8.095792 TGCATGTCACCAAAAATTCTATCATTT 58.904 29.630 0.00 0.00 0.00 2.32
94 95 9.585099 GCATGTCACCAAAAATTCTATCATTTA 57.415 29.630 0.00 0.00 0.00 1.40
121 122 9.537848 AAAACTATGTTGAAATACGAATCGAAC 57.462 29.630 10.55 2.51 0.00 3.95
122 123 7.821595 ACTATGTTGAAATACGAATCGAACA 57.178 32.000 10.55 8.72 0.00 3.18
123 124 8.246908 ACTATGTTGAAATACGAATCGAACAA 57.753 30.769 10.55 5.30 0.00 2.83
124 125 8.879759 ACTATGTTGAAATACGAATCGAACAAT 58.120 29.630 10.55 2.13 0.00 2.71
137 138 9.325150 ACGAATCGAACAATATAACTTTTGTTG 57.675 29.630 10.55 1.78 43.95 3.33
138 139 9.536558 CGAATCGAACAATATAACTTTTGTTGA 57.463 29.630 0.00 5.91 43.95 3.18
142 143 9.605955 TCGAACAATATAACTTTTGTTGACATG 57.394 29.630 6.86 0.00 43.95 3.21
143 144 8.365210 CGAACAATATAACTTTTGTTGACATGC 58.635 33.333 6.86 0.00 43.95 4.06
144 145 9.190858 GAACAATATAACTTTTGTTGACATGCA 57.809 29.630 6.86 0.00 43.95 3.96
145 146 8.519492 ACAATATAACTTTTGTTGACATGCAC 57.481 30.769 0.00 0.00 43.41 4.57
146 147 8.359642 ACAATATAACTTTTGTTGACATGCACT 58.640 29.630 0.00 0.00 43.41 4.40
147 148 9.838975 CAATATAACTTTTGTTGACATGCACTA 57.161 29.630 0.00 0.00 43.41 2.74
149 150 9.840427 ATATAACTTTTGTTGACATGCACTAAC 57.160 29.630 0.00 0.00 43.41 2.34
150 151 5.574891 ACTTTTGTTGACATGCACTAACA 57.425 34.783 0.00 0.00 0.00 2.41
151 152 6.147864 ACTTTTGTTGACATGCACTAACAT 57.852 33.333 0.00 0.00 33.56 2.71
152 153 6.572519 ACTTTTGTTGACATGCACTAACATT 58.427 32.000 0.00 0.00 33.56 2.71
153 154 7.041107 ACTTTTGTTGACATGCACTAACATTT 58.959 30.769 0.00 0.00 33.56 2.32
154 155 7.548780 ACTTTTGTTGACATGCACTAACATTTT 59.451 29.630 0.00 0.00 33.56 1.82
155 156 8.932945 TTTTGTTGACATGCACTAACATTTTA 57.067 26.923 0.00 0.00 33.56 1.52
156 157 9.539825 TTTTGTTGACATGCACTAACATTTTAT 57.460 25.926 0.00 0.00 33.56 1.40
157 158 8.741101 TTGTTGACATGCACTAACATTTTATC 57.259 30.769 0.00 0.00 33.56 1.75
158 159 7.880105 TGTTGACATGCACTAACATTTTATCA 58.120 30.769 0.00 0.00 0.00 2.15
159 160 8.022550 TGTTGACATGCACTAACATTTTATCAG 58.977 33.333 0.00 0.00 0.00 2.90
160 161 7.686438 TGACATGCACTAACATTTTATCAGT 57.314 32.000 0.00 0.00 0.00 3.41
161 162 8.109705 TGACATGCACTAACATTTTATCAGTT 57.890 30.769 0.00 0.00 0.00 3.16
162 163 9.225436 TGACATGCACTAACATTTTATCAGTTA 57.775 29.630 0.00 0.00 0.00 2.24
174 175 9.308000 ACATTTTATCAGTTAAATCTTGGGTCA 57.692 29.630 0.00 0.00 30.03 4.02
188 189 9.898152 AAATCTTGGGTCAAAATTTAGAACAAA 57.102 25.926 0.00 0.00 0.00 2.83
193 194 9.549078 TTGGGTCAAAATTTAGAACAAATTACC 57.451 29.630 0.00 5.09 30.53 2.85
194 195 8.705594 TGGGTCAAAATTTAGAACAAATTACCA 58.294 29.630 11.88 0.00 31.87 3.25
195 196 9.719355 GGGTCAAAATTTAGAACAAATTACCAT 57.281 29.630 11.88 0.00 31.87 3.55
202 203 9.533831 AATTTAGAACAAATTACCATGAGGACT 57.466 29.630 0.00 0.00 38.69 3.85
210 211 9.185680 ACAAATTACCATGAGGACTAATAAACC 57.814 33.333 0.00 0.00 38.69 3.27
211 212 9.184523 CAAATTACCATGAGGACTAATAAACCA 57.815 33.333 0.00 0.00 38.69 3.67
212 213 8.980481 AATTACCATGAGGACTAATAAACCAG 57.020 34.615 0.00 0.00 38.69 4.00
213 214 5.373812 ACCATGAGGACTAATAAACCAGG 57.626 43.478 0.00 0.00 38.69 4.45
214 215 5.036916 ACCATGAGGACTAATAAACCAGGA 58.963 41.667 0.00 0.00 38.69 3.86
215 216 5.672194 ACCATGAGGACTAATAAACCAGGAT 59.328 40.000 0.00 0.00 38.69 3.24
216 217 6.183361 ACCATGAGGACTAATAAACCAGGATC 60.183 42.308 0.00 0.00 38.69 3.36
217 218 5.531122 TGAGGACTAATAAACCAGGATCG 57.469 43.478 0.00 0.00 0.00 3.69
218 219 4.344102 TGAGGACTAATAAACCAGGATCGG 59.656 45.833 0.00 0.00 0.00 4.18
219 220 4.553678 AGGACTAATAAACCAGGATCGGA 58.446 43.478 0.00 0.00 0.00 4.55
220 221 4.589374 AGGACTAATAAACCAGGATCGGAG 59.411 45.833 0.00 0.00 0.00 4.63
221 222 4.262506 GGACTAATAAACCAGGATCGGAGG 60.263 50.000 0.00 0.00 0.00 4.30
222 223 4.296056 ACTAATAAACCAGGATCGGAGGT 58.704 43.478 0.00 0.00 37.20 3.85
223 224 5.461327 ACTAATAAACCAGGATCGGAGGTA 58.539 41.667 0.00 0.00 34.63 3.08
224 225 4.957684 AATAAACCAGGATCGGAGGTAG 57.042 45.455 0.00 0.00 34.63 3.18
265 266 2.886523 TGGAGCAAATCAGTTGGTTCAG 59.113 45.455 0.00 0.00 46.19 3.02
266 267 4.312039 TGGAGCAAATCAGTTGGTTCAGG 61.312 47.826 0.00 0.00 46.19 3.86
267 268 3.228188 AGCAAATCAGTTGGTTCAGGA 57.772 42.857 0.00 0.00 45.71 3.86
268 269 3.771216 AGCAAATCAGTTGGTTCAGGAT 58.229 40.909 0.00 0.00 45.71 3.24
269 270 3.760684 AGCAAATCAGTTGGTTCAGGATC 59.239 43.478 0.00 0.00 45.71 3.36
270 271 3.507233 GCAAATCAGTTGGTTCAGGATCA 59.493 43.478 0.00 0.00 37.73 2.92
271 272 4.022068 GCAAATCAGTTGGTTCAGGATCAA 60.022 41.667 0.00 0.00 37.73 2.57
272 273 5.464168 CAAATCAGTTGGTTCAGGATCAAC 58.536 41.667 0.00 0.00 40.52 3.18
273 274 2.766313 TCAGTTGGTTCAGGATCAACG 58.234 47.619 0.00 0.00 43.70 4.10
274 275 1.806542 CAGTTGGTTCAGGATCAACGG 59.193 52.381 0.00 0.00 43.70 4.44
275 276 1.420138 AGTTGGTTCAGGATCAACGGT 59.580 47.619 0.00 0.00 43.70 4.83
276 277 1.535462 GTTGGTTCAGGATCAACGGTG 59.465 52.381 0.00 0.00 32.78 4.94
277 278 0.036164 TGGTTCAGGATCAACGGTGG 59.964 55.000 0.00 0.00 0.00 4.61
278 279 0.676782 GGTTCAGGATCAACGGTGGG 60.677 60.000 0.00 0.00 0.00 4.61
279 280 1.002624 TTCAGGATCAACGGTGGGC 60.003 57.895 0.00 0.00 0.00 5.36
280 281 1.488705 TTCAGGATCAACGGTGGGCT 61.489 55.000 0.00 0.00 0.00 5.19
281 282 1.002134 CAGGATCAACGGTGGGCTT 60.002 57.895 0.00 0.00 0.00 4.35
282 283 1.026718 CAGGATCAACGGTGGGCTTC 61.027 60.000 0.00 0.00 0.00 3.86
283 284 2.106683 GGATCAACGGTGGGCTTCG 61.107 63.158 0.00 0.00 0.00 3.79
284 285 1.079405 GATCAACGGTGGGCTTCGA 60.079 57.895 0.00 0.00 0.00 3.71
285 286 1.079127 ATCAACGGTGGGCTTCGAG 60.079 57.895 0.00 0.00 0.00 4.04
286 287 3.423154 CAACGGTGGGCTTCGAGC 61.423 66.667 0.00 0.00 41.46 5.03
287 288 3.936203 AACGGTGGGCTTCGAGCA 61.936 61.111 8.71 0.00 44.75 4.26
288 289 3.469863 AACGGTGGGCTTCGAGCAA 62.470 57.895 8.71 0.00 44.75 3.91
289 290 2.668212 CGGTGGGCTTCGAGCAAA 60.668 61.111 8.71 0.00 44.75 3.68
290 291 2.040544 CGGTGGGCTTCGAGCAAAT 61.041 57.895 8.71 0.00 44.75 2.32
291 292 1.803289 GGTGGGCTTCGAGCAAATC 59.197 57.895 8.71 0.00 44.75 2.17
292 293 0.960364 GGTGGGCTTCGAGCAAATCA 60.960 55.000 8.71 0.46 44.75 2.57
293 294 0.449388 GTGGGCTTCGAGCAAATCAG 59.551 55.000 8.71 0.00 44.75 2.90
294 295 0.036732 TGGGCTTCGAGCAAATCAGT 59.963 50.000 8.71 0.00 44.75 3.41
295 296 1.168714 GGGCTTCGAGCAAATCAGTT 58.831 50.000 8.71 0.00 44.75 3.16
296 297 1.135575 GGGCTTCGAGCAAATCAGTTG 60.136 52.381 8.71 0.00 44.75 3.16
297 298 1.135575 GGCTTCGAGCAAATCAGTTGG 60.136 52.381 8.71 0.00 44.75 3.77
323 324 0.392998 ATCAACGGTGGGCTGATGTC 60.393 55.000 0.00 0.00 0.00 3.06
331 332 0.250684 TGGGCTGATGTCGAGCAAAA 60.251 50.000 0.00 0.00 38.27 2.44
361 2329 1.496060 ATGATTAGCGGGTCTCACCA 58.504 50.000 0.00 0.00 41.02 4.17
845 3976 6.515512 TTAGGATTATTGAAAGGGGAGAGG 57.484 41.667 0.00 0.00 0.00 3.69
846 3977 3.724209 AGGATTATTGAAAGGGGAGAGGG 59.276 47.826 0.00 0.00 0.00 4.30
847 3978 3.491342 GATTATTGAAAGGGGAGAGGGC 58.509 50.000 0.00 0.00 0.00 5.19
848 3979 1.222567 TATTGAAAGGGGAGAGGGCC 58.777 55.000 0.00 0.00 0.00 5.80
926 4072 6.798959 ACTATTTCCGATACTATAAACGCGTC 59.201 38.462 14.44 0.00 0.00 5.19
1110 4259 2.464459 GCGGAGGAATGTTCTGCCG 61.464 63.158 16.63 16.63 40.32 5.69
1125 4274 2.108362 CCGGTCATTAGGGCGGTC 59.892 66.667 0.00 0.00 0.00 4.79
1240 4401 0.385473 GGTGCGTGCATGTGTTGTAC 60.385 55.000 7.93 0.00 37.56 2.90
1241 4402 0.306228 GTGCGTGCATGTGTTGTACA 59.694 50.000 7.93 0.00 40.62 2.90
1284 4445 2.693591 TGTGGACTCTGACCGGATATTC 59.306 50.000 9.46 0.00 0.00 1.75
1459 4620 0.465705 GTCCGATCATCCAGGCTTCA 59.534 55.000 0.00 0.00 0.00 3.02
1561 4722 0.456221 CGGTGGTGCTCTTCTCGTAT 59.544 55.000 0.00 0.00 0.00 3.06
1612 4773 2.665519 CGAAATCAAAGAAGCCGGTGTG 60.666 50.000 1.90 0.00 0.00 3.82
1624 4785 0.248907 CCGGTGTGCACGGTAGATAG 60.249 60.000 13.13 0.00 46.03 2.08
1720 4881 8.539117 TTCTCTTGATCTTATGTACATCTCCA 57.461 34.615 12.68 2.22 0.00 3.86
1814 4975 2.103263 ACCTCGAGCTGGTATTTCCATC 59.897 50.000 6.99 0.00 46.12 3.51
1836 4997 1.465777 TGTGTCATTCATCAGCAAGCG 59.534 47.619 0.00 0.00 0.00 4.68
1851 5013 3.057033 AGCAAGCGAGCATTTCAAATTCT 60.057 39.130 6.21 0.00 36.85 2.40
1873 5035 9.847706 ATTCTTTACACTATAGATATCGCACTG 57.152 33.333 6.78 0.00 0.00 3.66
1889 5051 2.884639 GCACTGCCAGAAAGTAGGAAAA 59.115 45.455 0.00 0.00 0.00 2.29
1983 5145 4.133820 TGAAGGAAATCACGAAAGCTTCA 58.866 39.130 0.00 0.00 31.18 3.02
2027 5189 1.618487 TTCAGCACATGCAATCCACA 58.382 45.000 6.64 0.00 45.16 4.17
2089 5251 6.314400 GCATTCTCCAACTTAACCGTATTACA 59.686 38.462 0.00 0.00 0.00 2.41
2134 5296 1.232119 GTCCCCGTGAAAACGTGAAT 58.768 50.000 0.00 0.00 0.00 2.57
2330 5494 2.518349 ACCACGGGTTTGTGCTGG 60.518 61.111 0.00 0.00 38.55 4.85
2436 5602 8.902806 CATATTTAAATTGTGTCCCAAGAGCTA 58.097 33.333 5.91 0.00 36.25 3.32
2489 5656 1.100510 CACATGGACAGATTGCAGGG 58.899 55.000 0.00 0.00 30.36 4.45
2537 5704 0.391130 GTGCGATGGTGAGGCAGTTA 60.391 55.000 0.00 0.00 37.36 2.24
2557 5724 2.112928 TGAAGCAGCTTCGCCCAA 59.887 55.556 26.58 9.12 42.78 4.12
2573 5740 3.255642 CGCCCAAAGAAGGATTGAAAAGA 59.744 43.478 0.00 0.00 0.00 2.52
2634 5801 2.002586 GATGAAGTGTGTGGATGGACG 58.997 52.381 0.00 0.00 0.00 4.79
2647 5814 0.036164 ATGGACGCAGCACCAGTAAA 59.964 50.000 12.85 0.00 40.15 2.01
2665 5832 6.263168 CCAGTAAATAAATTGATCGGAAGCCT 59.737 38.462 0.00 0.00 0.00 4.58
2684 5851 4.523558 AGCCTAGTAATAAAGCTACTCCGG 59.476 45.833 0.00 0.00 31.98 5.14
2688 5855 5.708877 AGTAATAAAGCTACTCCGGCTAG 57.291 43.478 0.00 0.00 39.30 3.42
2689 5856 5.383476 AGTAATAAAGCTACTCCGGCTAGA 58.617 41.667 0.00 0.00 39.30 2.43
2690 5857 6.011481 AGTAATAAAGCTACTCCGGCTAGAT 58.989 40.000 0.00 0.00 39.30 1.98
2691 5858 5.394224 AATAAAGCTACTCCGGCTAGATC 57.606 43.478 0.00 0.00 39.30 2.75
2700 5867 0.805614 CCGGCTAGATCGATCGTCAT 59.194 55.000 19.33 1.37 0.00 3.06
2701 5868 1.202087 CCGGCTAGATCGATCGTCATC 60.202 57.143 19.33 11.65 0.00 2.92
2704 5871 3.309954 CGGCTAGATCGATCGTCATCATA 59.690 47.826 19.33 4.16 0.00 2.15
2709 5876 8.079203 GGCTAGATCGATCGTCATCATATTATT 58.921 37.037 19.33 0.00 0.00 1.40
2739 5906 6.832384 TGTGGAGTTAGAAATCGGAGTACTAT 59.168 38.462 0.00 0.00 0.00 2.12
2740 5907 7.140048 GTGGAGTTAGAAATCGGAGTACTATG 58.860 42.308 0.00 0.00 0.00 2.23
2748 5915 3.541996 TCGGAGTACTATGTACCGTGA 57.458 47.619 16.79 0.00 43.36 4.35
2759 5926 3.755112 TGTACCGTGATTCCAGTTCAA 57.245 42.857 0.00 0.00 0.00 2.69
2791 5958 5.893687 TCGTCATTGTATCGTTAGCCTTTA 58.106 37.500 0.00 0.00 0.00 1.85
2814 5985 1.548719 CGGTGATGGTCCTGAGTAACA 59.451 52.381 0.00 0.00 0.00 2.41
2819 5990 5.063880 GTGATGGTCCTGAGTAACAAGTTT 58.936 41.667 0.00 0.00 0.00 2.66
2893 6078 5.229423 GGCAAATAAAACAAGATGTGCTCA 58.771 37.500 0.00 0.00 36.65 4.26
2894 6079 5.870978 GGCAAATAAAACAAGATGTGCTCAT 59.129 36.000 0.00 0.00 36.65 2.90
2895 6080 6.183360 GGCAAATAAAACAAGATGTGCTCATG 60.183 38.462 5.89 0.00 36.65 3.07
2896 6081 6.671402 GCAAATAAAACAAGATGTGCTCATGC 60.671 38.462 5.89 0.00 34.08 4.06
2897 6082 5.909621 ATAAAACAAGATGTGCTCATGCT 57.090 34.783 5.89 0.89 40.48 3.79
2898 6083 4.595762 AAAACAAGATGTGCTCATGCTT 57.404 36.364 5.89 6.78 40.48 3.91
2899 6084 3.844577 AACAAGATGTGCTCATGCTTC 57.155 42.857 5.89 0.00 40.48 3.86
2900 6085 2.089980 ACAAGATGTGCTCATGCTTCC 58.910 47.619 5.89 0.00 40.48 3.46
2901 6086 1.063616 CAAGATGTGCTCATGCTTCCG 59.936 52.381 5.89 0.00 40.48 4.30
2902 6087 0.251354 AGATGTGCTCATGCTTCCGT 59.749 50.000 5.89 0.00 40.48 4.69
2903 6088 1.089920 GATGTGCTCATGCTTCCGTT 58.910 50.000 5.89 0.00 40.48 4.44
2904 6089 0.806868 ATGTGCTCATGCTTCCGTTG 59.193 50.000 0.00 0.00 40.48 4.10
2905 6090 0.250252 TGTGCTCATGCTTCCGTTGA 60.250 50.000 0.00 0.00 40.48 3.18
2906 6091 1.089920 GTGCTCATGCTTCCGTTGAT 58.910 50.000 0.00 0.00 40.48 2.57
2907 6092 1.089112 TGCTCATGCTTCCGTTGATG 58.911 50.000 0.00 0.00 40.48 3.07
2908 6093 0.248377 GCTCATGCTTCCGTTGATGC 60.248 55.000 0.00 0.00 40.94 3.91
2909 6094 1.376543 CTCATGCTTCCGTTGATGCT 58.623 50.000 0.00 0.00 41.10 3.79
2910 6095 1.741706 CTCATGCTTCCGTTGATGCTT 59.258 47.619 0.00 0.00 41.10 3.91
2911 6096 1.739466 TCATGCTTCCGTTGATGCTTC 59.261 47.619 0.00 0.00 41.10 3.86
2912 6097 1.469703 CATGCTTCCGTTGATGCTTCA 59.530 47.619 0.00 0.00 41.10 3.02
2913 6098 0.874390 TGCTTCCGTTGATGCTTCAC 59.126 50.000 1.02 0.00 41.10 3.18
2914 6099 1.160137 GCTTCCGTTGATGCTTCACT 58.840 50.000 1.02 0.00 38.33 3.41
2915 6100 2.289382 TGCTTCCGTTGATGCTTCACTA 60.289 45.455 1.02 0.00 41.10 2.74
2916 6101 2.939103 GCTTCCGTTGATGCTTCACTAT 59.061 45.455 1.02 0.00 38.33 2.12
2917 6102 3.375299 GCTTCCGTTGATGCTTCACTATT 59.625 43.478 1.02 0.00 38.33 1.73
2918 6103 4.142600 GCTTCCGTTGATGCTTCACTATTT 60.143 41.667 1.02 0.00 38.33 1.40
2919 6104 5.619981 GCTTCCGTTGATGCTTCACTATTTT 60.620 40.000 1.02 0.00 38.33 1.82
2920 6105 5.957842 TCCGTTGATGCTTCACTATTTTT 57.042 34.783 1.02 0.00 0.00 1.94
2921 6106 5.698832 TCCGTTGATGCTTCACTATTTTTG 58.301 37.500 1.02 0.00 0.00 2.44
2922 6107 5.240623 TCCGTTGATGCTTCACTATTTTTGT 59.759 36.000 1.02 0.00 0.00 2.83
2923 6108 5.920273 CCGTTGATGCTTCACTATTTTTGTT 59.080 36.000 1.02 0.00 0.00 2.83
2924 6109 6.088085 CCGTTGATGCTTCACTATTTTTGTTC 59.912 38.462 1.02 0.00 0.00 3.18
2925 6110 6.857964 CGTTGATGCTTCACTATTTTTGTTCT 59.142 34.615 1.02 0.00 0.00 3.01
2926 6111 7.059945 CGTTGATGCTTCACTATTTTTGTTCTC 59.940 37.037 1.02 0.00 0.00 2.87
2927 6112 7.750229 TGATGCTTCACTATTTTTGTTCTCT 57.250 32.000 0.00 0.00 0.00 3.10
2928 6113 7.810658 TGATGCTTCACTATTTTTGTTCTCTC 58.189 34.615 0.00 0.00 0.00 3.20
2929 6114 7.445096 TGATGCTTCACTATTTTTGTTCTCTCA 59.555 33.333 0.00 0.00 0.00 3.27
2930 6115 7.194607 TGCTTCACTATTTTTGTTCTCTCAG 57.805 36.000 0.00 0.00 0.00 3.35
2931 6116 6.767902 TGCTTCACTATTTTTGTTCTCTCAGT 59.232 34.615 0.00 0.00 0.00 3.41
2932 6117 7.074502 GCTTCACTATTTTTGTTCTCTCAGTG 58.925 38.462 0.00 0.00 34.78 3.66
2933 6118 6.545504 TCACTATTTTTGTTCTCTCAGTGC 57.454 37.500 0.00 0.00 33.77 4.40
2934 6119 6.291377 TCACTATTTTTGTTCTCTCAGTGCT 58.709 36.000 0.00 0.00 33.77 4.40
2935 6120 6.203530 TCACTATTTTTGTTCTCTCAGTGCTG 59.796 38.462 0.00 0.00 33.77 4.41
2936 6121 6.203530 CACTATTTTTGTTCTCTCAGTGCTGA 59.796 38.462 1.69 1.69 38.06 4.26
2937 6122 6.767902 ACTATTTTTGTTCTCTCAGTGCTGAA 59.232 34.615 3.36 0.00 39.39 3.02
2938 6123 6.645790 ATTTTTGTTCTCTCAGTGCTGAAT 57.354 33.333 3.36 0.00 39.39 2.57
2939 6124 5.428496 TTTTGTTCTCTCAGTGCTGAATG 57.572 39.130 3.36 0.09 39.39 2.67
2940 6125 3.758755 TGTTCTCTCAGTGCTGAATGT 57.241 42.857 3.36 0.00 39.39 2.71
2941 6126 4.077300 TGTTCTCTCAGTGCTGAATGTT 57.923 40.909 3.36 0.00 39.39 2.71
2942 6127 4.454678 TGTTCTCTCAGTGCTGAATGTTT 58.545 39.130 3.36 0.00 39.39 2.83
2943 6128 4.274214 TGTTCTCTCAGTGCTGAATGTTTG 59.726 41.667 3.36 0.00 39.39 2.93
2944 6129 2.810274 TCTCTCAGTGCTGAATGTTTGC 59.190 45.455 3.36 0.00 39.39 3.68
2945 6130 2.812591 CTCTCAGTGCTGAATGTTTGCT 59.187 45.455 3.36 0.00 39.39 3.91
2946 6131 2.551032 TCTCAGTGCTGAATGTTTGCTG 59.449 45.455 3.36 0.00 39.39 4.41
2947 6132 1.610038 TCAGTGCTGAATGTTTGCTGG 59.390 47.619 0.00 0.00 36.53 4.85
2948 6133 0.316204 AGTGCTGAATGTTTGCTGGC 59.684 50.000 0.00 0.00 0.00 4.85
2949 6134 0.032403 GTGCTGAATGTTTGCTGGCA 59.968 50.000 0.00 0.00 0.00 4.92
2950 6135 0.751452 TGCTGAATGTTTGCTGGCAA 59.249 45.000 3.72 3.72 0.00 4.52
2951 6136 1.138464 TGCTGAATGTTTGCTGGCAAA 59.862 42.857 15.51 15.51 42.77 3.68
2952 6137 2.211806 GCTGAATGTTTGCTGGCAAAA 58.788 42.857 20.10 12.06 45.86 2.44
2953 6138 2.222445 GCTGAATGTTTGCTGGCAAAAG 59.778 45.455 20.10 14.75 45.86 2.27
2954 6139 3.460103 CTGAATGTTTGCTGGCAAAAGT 58.540 40.909 20.10 10.47 45.86 2.66
2955 6140 3.196463 TGAATGTTTGCTGGCAAAAGTG 58.804 40.909 20.10 0.00 45.86 3.16
2956 6141 3.118847 TGAATGTTTGCTGGCAAAAGTGA 60.119 39.130 20.10 7.34 45.86 3.41
2957 6142 2.292103 TGTTTGCTGGCAAAAGTGAC 57.708 45.000 20.10 10.38 45.86 3.67
2958 6143 1.134848 TGTTTGCTGGCAAAAGTGACC 60.135 47.619 20.10 9.09 45.86 4.02
2959 6144 0.102120 TTTGCTGGCAAAAGTGACCG 59.898 50.000 16.87 0.00 42.16 4.79
2960 6145 2.050077 GCTGGCAAAAGTGACCGC 60.050 61.111 0.00 0.00 0.00 5.68
2961 6146 2.252260 CTGGCAAAAGTGACCGCG 59.748 61.111 0.00 0.00 0.00 6.46
2962 6147 3.879351 CTGGCAAAAGTGACCGCGC 62.879 63.158 0.00 0.00 0.00 6.86
2974 6159 2.625906 CCGCGCGGTAACATCATG 59.374 61.111 39.71 11.06 0.00 3.07
2975 6160 1.880796 CCGCGCGGTAACATCATGA 60.881 57.895 39.71 0.00 0.00 3.07
2976 6161 1.559814 CGCGCGGTAACATCATGAG 59.440 57.895 24.84 0.00 0.00 2.90
2977 6162 0.869880 CGCGCGGTAACATCATGAGA 60.870 55.000 24.84 0.00 0.00 3.27
2978 6163 0.577269 GCGCGGTAACATCATGAGAC 59.423 55.000 8.83 0.00 0.00 3.36
2979 6164 0.846401 CGCGGTAACATCATGAGACG 59.154 55.000 0.09 0.65 0.00 4.18
2980 6165 1.797713 CGCGGTAACATCATGAGACGT 60.798 52.381 0.09 0.00 0.00 4.34
2981 6166 1.588404 GCGGTAACATCATGAGACGTG 59.412 52.381 0.09 0.00 0.00 4.49
2982 6167 1.588404 CGGTAACATCATGAGACGTGC 59.412 52.381 0.09 0.00 0.00 5.34
2983 6168 2.616960 GGTAACATCATGAGACGTGCA 58.383 47.619 0.09 0.00 0.00 4.57
2984 6169 3.198068 GGTAACATCATGAGACGTGCAT 58.802 45.455 0.09 0.00 0.00 3.96
2985 6170 3.001634 GGTAACATCATGAGACGTGCATG 59.998 47.826 17.55 17.55 43.39 4.06
2986 6171 1.012086 ACATCATGAGACGTGCATGC 58.988 50.000 11.82 11.82 42.13 4.06
2987 6172 1.296727 CATCATGAGACGTGCATGCT 58.703 50.000 20.33 9.80 42.13 3.79
2988 6173 1.669265 CATCATGAGACGTGCATGCTT 59.331 47.619 20.33 2.66 42.13 3.91
2989 6174 1.081094 TCATGAGACGTGCATGCTTG 58.919 50.000 20.33 13.49 42.13 4.01
3002 6187 0.536687 ATGCTTGATGCTCATCGGGG 60.537 55.000 5.51 0.36 43.37 5.73
3029 6214 7.119605 TCGTTCTACGATTCTAGCTATCTTC 57.880 40.000 0.00 0.00 46.73 2.87
3033 6218 9.176181 GTTCTACGATTCTAGCTATCTTCTTTG 57.824 37.037 0.00 0.00 0.00 2.77
3036 6221 9.522804 CTACGATTCTAGCTATCTTCTTTGTTT 57.477 33.333 0.00 0.00 0.00 2.83
3051 6236 7.975616 TCTTCTTTGTTTATTTCATATGCAGGC 59.024 33.333 0.00 0.00 0.00 4.85
3052 6237 6.572519 TCTTTGTTTATTTCATATGCAGGCC 58.427 36.000 0.00 0.00 0.00 5.19
3055 6240 6.147864 TGTTTATTTCATATGCAGGCCTTC 57.852 37.500 0.00 0.00 0.00 3.46
3056 6241 5.655974 TGTTTATTTCATATGCAGGCCTTCA 59.344 36.000 7.79 7.79 0.00 3.02
3058 6243 7.505248 TGTTTATTTCATATGCAGGCCTTCATA 59.495 33.333 24.61 24.61 0.00 2.15
3061 6246 9.752228 TTATTTCATATGCAGGCCTTCATATAA 57.248 29.630 29.93 23.35 34.97 0.98
3063 6248 7.452880 TTCATATGCAGGCCTTCATATAAAC 57.547 36.000 29.93 2.76 34.97 2.01
3065 6250 6.430925 TCATATGCAGGCCTTCATATAAACAC 59.569 38.462 29.93 0.00 34.97 3.32
3067 6252 3.694072 TGCAGGCCTTCATATAAACACAC 59.306 43.478 0.00 0.00 0.00 3.82
3069 6254 4.339247 GCAGGCCTTCATATAAACACACAT 59.661 41.667 0.00 0.00 0.00 3.21
3070 6255 5.530915 GCAGGCCTTCATATAAACACACATA 59.469 40.000 0.00 0.00 0.00 2.29
3071 6256 6.039270 GCAGGCCTTCATATAAACACACATAA 59.961 38.462 0.00 0.00 0.00 1.90
3072 6257 7.416213 GCAGGCCTTCATATAAACACACATAAA 60.416 37.037 0.00 0.00 0.00 1.40
3074 6259 9.200817 AGGCCTTCATATAAACACACATAAATT 57.799 29.630 0.00 0.00 0.00 1.82
3118 7725 1.155889 TGTCGTCCAACATGTCATGC 58.844 50.000 12.91 0.00 0.00 4.06
3126 7733 5.581605 GTCCAACATGTCATGCGAAATAAT 58.418 37.500 12.91 0.00 0.00 1.28
3159 7766 3.700538 AGGTGGCATCATACATTGTTGT 58.299 40.909 0.00 0.00 39.98 3.32
3184 7791 7.334421 GTCTTCAGCAATTAGTGATGGTAAAGA 59.666 37.037 0.00 0.00 44.11 2.52
3193 7800 8.839310 ATTAGTGATGGTAAAGATGCTATGTC 57.161 34.615 0.00 0.00 0.00 3.06
3211 7818 4.834357 TGTCATCTGAAACCAACATGTG 57.166 40.909 0.00 0.00 0.00 3.21
3212 7819 3.004629 TGTCATCTGAAACCAACATGTGC 59.995 43.478 0.00 0.00 0.00 4.57
3213 7820 2.557924 TCATCTGAAACCAACATGTGCC 59.442 45.455 0.00 0.00 0.00 5.01
3214 7821 1.327303 TCTGAAACCAACATGTGCCC 58.673 50.000 0.00 0.00 0.00 5.36
3215 7822 0.039256 CTGAAACCAACATGTGCCCG 60.039 55.000 0.00 0.00 0.00 6.13
3218 7825 1.680522 AAACCAACATGTGCCCGCAA 61.681 50.000 0.00 0.00 0.00 4.85
3219 7826 1.680522 AACCAACATGTGCCCGCAAA 61.681 50.000 0.00 0.00 0.00 3.68
3220 7827 1.068753 CCAACATGTGCCCGCAAAA 59.931 52.632 0.00 0.00 0.00 2.44
3283 7890 9.903190 AATAAGATATTGGAATGGAGGGATTTT 57.097 29.630 0.00 0.00 0.00 1.82
3284 7891 9.903190 ATAAGATATTGGAATGGAGGGATTTTT 57.097 29.630 0.00 0.00 0.00 1.94
3286 7893 8.946797 AGATATTGGAATGGAGGGATTTTTAG 57.053 34.615 0.00 0.00 0.00 1.85
3287 7894 7.952368 AGATATTGGAATGGAGGGATTTTTAGG 59.048 37.037 0.00 0.00 0.00 2.69
3288 7895 5.544441 TTGGAATGGAGGGATTTTTAGGA 57.456 39.130 0.00 0.00 0.00 2.94
3289 7896 4.867086 TGGAATGGAGGGATTTTTAGGAC 58.133 43.478 0.00 0.00 0.00 3.85
3290 7897 3.883489 GGAATGGAGGGATTTTTAGGACG 59.117 47.826 0.00 0.00 0.00 4.79
3291 7898 4.384868 GGAATGGAGGGATTTTTAGGACGA 60.385 45.833 0.00 0.00 0.00 4.20
3293 7900 4.644163 TGGAGGGATTTTTAGGACGAAA 57.356 40.909 0.00 0.00 0.00 3.46
3296 7903 6.723339 TGGAGGGATTTTTAGGACGAAATTA 58.277 36.000 0.00 0.00 0.00 1.40
3297 7904 6.826741 TGGAGGGATTTTTAGGACGAAATTAG 59.173 38.462 0.00 0.00 0.00 1.73
3298 7905 6.262496 GGAGGGATTTTTAGGACGAAATTAGG 59.738 42.308 0.00 0.00 0.00 2.69
3299 7906 6.965607 AGGGATTTTTAGGACGAAATTAGGA 58.034 36.000 0.00 0.00 0.00 2.94
3300 7907 7.583625 AGGGATTTTTAGGACGAAATTAGGAT 58.416 34.615 0.00 0.00 0.00 3.24
3301 7908 7.502561 AGGGATTTTTAGGACGAAATTAGGATG 59.497 37.037 0.00 0.00 0.00 3.51
3302 7909 7.284716 GGGATTTTTAGGACGAAATTAGGATGT 59.715 37.037 0.00 0.00 0.00 3.06
3304 7911 6.431198 TTTTAGGACGAAATTAGGATGTGC 57.569 37.500 0.00 0.00 0.00 4.57
3305 7912 2.919228 AGGACGAAATTAGGATGTGCC 58.081 47.619 0.00 0.00 0.00 5.01
3316 7923 1.530323 GGATGTGCCTTGGTTAACGT 58.470 50.000 0.00 0.00 0.00 3.99
3320 7927 0.040425 GTGCCTTGGTTAACGTGCTG 60.040 55.000 0.00 0.00 0.00 4.41
3321 7928 0.179043 TGCCTTGGTTAACGTGCTGA 60.179 50.000 0.00 0.00 0.00 4.26
3322 7929 0.948678 GCCTTGGTTAACGTGCTGAA 59.051 50.000 0.00 0.00 0.00 3.02
3323 7930 1.335496 GCCTTGGTTAACGTGCTGAAA 59.665 47.619 0.00 0.00 0.00 2.69
3324 7931 2.223618 GCCTTGGTTAACGTGCTGAAAA 60.224 45.455 0.00 0.00 0.00 2.29
3325 7932 3.552068 GCCTTGGTTAACGTGCTGAAAAT 60.552 43.478 0.00 0.00 0.00 1.82
3326 7933 4.320641 GCCTTGGTTAACGTGCTGAAAATA 60.321 41.667 0.00 0.00 0.00 1.40
3327 7934 5.764131 CCTTGGTTAACGTGCTGAAAATAA 58.236 37.500 0.00 0.00 0.00 1.40
3328 7935 6.386654 CCTTGGTTAACGTGCTGAAAATAAT 58.613 36.000 0.00 0.00 0.00 1.28
3329 7936 6.866248 CCTTGGTTAACGTGCTGAAAATAATT 59.134 34.615 0.00 0.00 0.00 1.40
3330 7937 7.061789 CCTTGGTTAACGTGCTGAAAATAATTC 59.938 37.037 0.00 0.00 0.00 2.17
3331 7938 6.383415 TGGTTAACGTGCTGAAAATAATTCC 58.617 36.000 0.00 0.00 0.00 3.01
3332 7939 6.207810 TGGTTAACGTGCTGAAAATAATTCCT 59.792 34.615 0.00 0.00 0.00 3.36
3333 7940 7.088272 GGTTAACGTGCTGAAAATAATTCCTT 58.912 34.615 0.00 0.00 0.00 3.36
3334 7941 7.597369 GGTTAACGTGCTGAAAATAATTCCTTT 59.403 33.333 0.00 0.00 0.00 3.11
3335 7942 8.635983 GTTAACGTGCTGAAAATAATTCCTTTC 58.364 33.333 0.00 5.58 33.10 2.62
3336 7943 5.709966 ACGTGCTGAAAATAATTCCTTTCC 58.290 37.500 8.81 0.00 31.75 3.13
3337 7944 5.476945 ACGTGCTGAAAATAATTCCTTTCCT 59.523 36.000 8.81 0.00 31.75 3.36
3338 7945 6.657541 ACGTGCTGAAAATAATTCCTTTCCTA 59.342 34.615 8.81 0.00 31.75 2.94
3339 7946 7.148239 ACGTGCTGAAAATAATTCCTTTCCTAG 60.148 37.037 8.81 3.80 31.75 3.02
3340 7947 7.065803 CGTGCTGAAAATAATTCCTTTCCTAGA 59.934 37.037 8.81 0.00 31.75 2.43
3341 7948 8.184848 GTGCTGAAAATAATTCCTTTCCTAGAC 58.815 37.037 8.81 0.57 31.75 2.59
3342 7949 8.109634 TGCTGAAAATAATTCCTTTCCTAGACT 58.890 33.333 8.81 0.00 31.75 3.24
3343 7950 9.614792 GCTGAAAATAATTCCTTTCCTAGACTA 57.385 33.333 8.81 0.00 31.75 2.59
3349 7956 9.954992 AATAATTCCTTTCCTAGACTAGTACCT 57.045 33.333 8.68 0.00 0.00 3.08
3350 7957 9.954992 ATAATTCCTTTCCTAGACTAGTACCTT 57.045 33.333 8.68 0.00 0.00 3.50
3351 7958 8.682297 AATTCCTTTCCTAGACTAGTACCTTT 57.318 34.615 8.68 0.00 0.00 3.11
3352 7959 7.715266 TTCCTTTCCTAGACTAGTACCTTTC 57.285 40.000 8.68 0.00 0.00 2.62
3353 7960 7.042106 TCCTTTCCTAGACTAGTACCTTTCT 57.958 40.000 8.68 0.00 0.00 2.52
3354 7961 7.477008 TCCTTTCCTAGACTAGTACCTTTCTT 58.523 38.462 8.68 0.00 0.00 2.52
3355 7962 8.618385 TCCTTTCCTAGACTAGTACCTTTCTTA 58.382 37.037 8.68 0.00 0.00 2.10
3356 7963 9.423964 CCTTTCCTAGACTAGTACCTTTCTTAT 57.576 37.037 8.68 0.00 0.00 1.73
3358 7965 8.993404 TTCCTAGACTAGTACCTTTCTTATCC 57.007 38.462 8.68 0.00 0.00 2.59
3359 7966 7.525165 TCCTAGACTAGTACCTTTCTTATCCC 58.475 42.308 8.68 0.00 0.00 3.85
3360 7967 6.720748 CCTAGACTAGTACCTTTCTTATCCCC 59.279 46.154 8.68 0.00 0.00 4.81
3361 7968 6.358443 AGACTAGTACCTTTCTTATCCCCT 57.642 41.667 0.00 0.00 0.00 4.79
3362 7969 6.754178 AGACTAGTACCTTTCTTATCCCCTT 58.246 40.000 0.00 0.00 0.00 3.95
3363 7970 7.197616 AGACTAGTACCTTTCTTATCCCCTTT 58.802 38.462 0.00 0.00 0.00 3.11
3364 7971 7.683322 AGACTAGTACCTTTCTTATCCCCTTTT 59.317 37.037 0.00 0.00 0.00 2.27
3365 7972 8.228353 ACTAGTACCTTTCTTATCCCCTTTTT 57.772 34.615 0.00 0.00 0.00 1.94
3397 8004 2.242965 TGCATGAGAATCCACTCCCATT 59.757 45.455 0.00 0.00 36.22 3.16
3398 8005 3.459227 TGCATGAGAATCCACTCCCATTA 59.541 43.478 0.00 0.00 36.22 1.90
3404 8011 9.135189 CATGAGAATCCACTCCCATTATTTTTA 57.865 33.333 0.00 0.00 36.22 1.52
3405 8012 9.887862 ATGAGAATCCACTCCCATTATTTTTAT 57.112 29.630 0.00 0.00 36.22 1.40
3406 8013 9.135189 TGAGAATCCACTCCCATTATTTTTATG 57.865 33.333 0.00 0.00 36.22 1.90
3407 8014 9.136323 GAGAATCCACTCCCATTATTTTTATGT 57.864 33.333 0.00 0.00 0.00 2.29
3411 8018 8.893563 TCCACTCCCATTATTTTTATGTTTCT 57.106 30.769 0.00 0.00 0.00 2.52
3413 8020 8.971073 CCACTCCCATTATTTTTATGTTTCTCT 58.029 33.333 0.00 0.00 0.00 3.10
3415 8022 9.981460 ACTCCCATTATTTTTATGTTTCTCTCT 57.019 29.630 0.00 0.00 0.00 3.10
3431 8038 7.554118 TGTTTCTCTCTTCCATATAGGCAAAAG 59.446 37.037 0.00 0.00 37.29 2.27
3434 8041 6.156949 TCTCTCTTCCATATAGGCAAAAGTGT 59.843 38.462 0.00 0.00 37.29 3.55
3438 8045 6.543465 TCTTCCATATAGGCAAAAGTGTCATG 59.457 38.462 0.00 0.00 37.29 3.07
3439 8046 5.754782 TCCATATAGGCAAAAGTGTCATGT 58.245 37.500 0.00 0.00 37.29 3.21
3442 8049 6.992123 CCATATAGGCAAAAGTGTCATGTAGA 59.008 38.462 0.00 0.00 0.00 2.59
3458 8065 8.215926 GTCATGTAGACGAGATATAAGCCTAT 57.784 38.462 0.00 0.00 37.53 2.57
3477 8084 8.788325 AGCCTATTATATTTATTTGGACCGTC 57.212 34.615 0.00 0.00 0.00 4.79
3478 8085 8.603304 AGCCTATTATATTTATTTGGACCGTCT 58.397 33.333 0.00 0.00 0.00 4.18
3479 8086 8.665685 GCCTATTATATTTATTTGGACCGTCTG 58.334 37.037 0.00 0.00 0.00 3.51
3480 8087 9.720769 CCTATTATATTTATTTGGACCGTCTGT 57.279 33.333 0.00 0.00 0.00 3.41
3501 8108 7.121315 GTCTGTCCCAATTTGCTCTAAACTATT 59.879 37.037 0.00 0.00 0.00 1.73
3539 8305 6.180472 AGGATATGTTCTTGATTTGAACCGT 58.820 36.000 0.00 0.00 42.04 4.83
3551 8335 2.404923 TGAACCGTTTGTCACCTTCA 57.595 45.000 0.00 0.00 0.00 3.02
3564 8348 4.159693 TGTCACCTTCATAACACTCGCTAT 59.840 41.667 0.00 0.00 0.00 2.97
3565 8349 4.504461 GTCACCTTCATAACACTCGCTATG 59.496 45.833 0.00 0.00 0.00 2.23
3572 8356 6.647212 TCATAACACTCGCTATGAAAACTG 57.353 37.500 0.00 0.00 32.80 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.148154 CGGATTACAATGAGAACCAATAAACCA 60.148 37.037 0.00 0.00 0.00 3.67
1 2 7.148137 ACGGATTACAATGAGAACCAATAAACC 60.148 37.037 0.00 0.00 0.00 3.27
2 3 7.696453 CACGGATTACAATGAGAACCAATAAAC 59.304 37.037 0.00 0.00 0.00 2.01
3 4 7.392113 ACACGGATTACAATGAGAACCAATAAA 59.608 33.333 0.00 0.00 0.00 1.40
4 5 6.882140 ACACGGATTACAATGAGAACCAATAA 59.118 34.615 0.00 0.00 0.00 1.40
5 6 6.411376 ACACGGATTACAATGAGAACCAATA 58.589 36.000 0.00 0.00 0.00 1.90
6 7 5.253330 ACACGGATTACAATGAGAACCAAT 58.747 37.500 0.00 0.00 0.00 3.16
7 8 4.647611 ACACGGATTACAATGAGAACCAA 58.352 39.130 0.00 0.00 0.00 3.67
8 9 4.280436 ACACGGATTACAATGAGAACCA 57.720 40.909 0.00 0.00 0.00 3.67
9 10 6.730960 TTAACACGGATTACAATGAGAACC 57.269 37.500 0.00 0.00 0.00 3.62
10 11 9.620660 AAATTTAACACGGATTACAATGAGAAC 57.379 29.630 0.00 0.00 0.00 3.01
12 13 9.619316 CAAAATTTAACACGGATTACAATGAGA 57.381 29.630 0.00 0.00 0.00 3.27
13 14 9.619316 TCAAAATTTAACACGGATTACAATGAG 57.381 29.630 0.00 0.00 0.00 2.90
14 15 9.400638 GTCAAAATTTAACACGGATTACAATGA 57.599 29.630 0.00 0.00 0.00 2.57
15 16 8.643752 GGTCAAAATTTAACACGGATTACAATG 58.356 33.333 0.00 0.00 0.00 2.82
16 17 8.361139 TGGTCAAAATTTAACACGGATTACAAT 58.639 29.630 0.00 0.00 0.00 2.71
17 18 7.713750 TGGTCAAAATTTAACACGGATTACAA 58.286 30.769 0.00 0.00 0.00 2.41
18 19 7.273320 TGGTCAAAATTTAACACGGATTACA 57.727 32.000 0.00 0.00 0.00 2.41
19 20 9.843334 TTATGGTCAAAATTTAACACGGATTAC 57.157 29.630 0.00 0.00 0.00 1.89
21 22 9.936759 ATTTATGGTCAAAATTTAACACGGATT 57.063 25.926 0.00 0.00 0.00 3.01
22 23 9.936759 AATTTATGGTCAAAATTTAACACGGAT 57.063 25.926 0.00 0.00 33.78 4.18
23 24 9.765795 AAATTTATGGTCAAAATTTAACACGGA 57.234 25.926 5.06 0.00 42.05 4.69
49 50 9.183368 TGACATGCATAAACATTCCATTAGTTA 57.817 29.630 0.00 0.00 0.00 2.24
50 51 7.975616 GTGACATGCATAAACATTCCATTAGTT 59.024 33.333 0.00 0.00 0.00 2.24
51 52 7.416664 GGTGACATGCATAAACATTCCATTAGT 60.417 37.037 0.00 0.00 0.00 2.24
52 53 6.919662 GGTGACATGCATAAACATTCCATTAG 59.080 38.462 0.00 0.00 0.00 1.73
53 54 6.379417 TGGTGACATGCATAAACATTCCATTA 59.621 34.615 0.00 0.00 33.40 1.90
54 55 5.187381 TGGTGACATGCATAAACATTCCATT 59.813 36.000 0.00 0.00 33.40 3.16
55 56 4.710865 TGGTGACATGCATAAACATTCCAT 59.289 37.500 0.00 0.00 33.40 3.41
56 57 4.085009 TGGTGACATGCATAAACATTCCA 58.915 39.130 0.00 2.47 33.40 3.53
57 58 4.717233 TGGTGACATGCATAAACATTCC 57.283 40.909 0.00 0.00 33.40 3.01
58 59 7.418840 TTTTTGGTGACATGCATAAACATTC 57.581 32.000 0.00 0.00 42.32 2.67
59 60 7.982761 ATTTTTGGTGACATGCATAAACATT 57.017 28.000 0.00 0.00 42.32 2.71
60 61 7.879160 AGAATTTTTGGTGACATGCATAAACAT 59.121 29.630 0.00 0.00 42.32 2.71
61 62 7.215789 AGAATTTTTGGTGACATGCATAAACA 58.784 30.769 0.00 0.00 42.32 2.83
62 63 7.656707 AGAATTTTTGGTGACATGCATAAAC 57.343 32.000 0.00 0.00 42.32 2.01
63 64 9.585099 GATAGAATTTTTGGTGACATGCATAAA 57.415 29.630 0.00 0.00 42.32 1.40
64 65 8.747471 TGATAGAATTTTTGGTGACATGCATAA 58.253 29.630 0.00 0.00 42.32 1.90
65 66 8.291191 TGATAGAATTTTTGGTGACATGCATA 57.709 30.769 0.00 0.00 42.32 3.14
66 67 7.172868 TGATAGAATTTTTGGTGACATGCAT 57.827 32.000 0.00 0.00 42.32 3.96
67 68 6.587206 TGATAGAATTTTTGGTGACATGCA 57.413 33.333 0.00 0.00 42.32 3.96
68 69 8.483307 AAATGATAGAATTTTTGGTGACATGC 57.517 30.769 0.00 0.00 42.32 4.06
95 96 9.537848 GTTCGATTCGTATTTCAACATAGTTTT 57.462 29.630 5.89 0.00 0.00 2.43
96 97 8.714179 TGTTCGATTCGTATTTCAACATAGTTT 58.286 29.630 5.89 0.00 0.00 2.66
97 98 8.246908 TGTTCGATTCGTATTTCAACATAGTT 57.753 30.769 5.89 0.00 0.00 2.24
98 99 7.821595 TGTTCGATTCGTATTTCAACATAGT 57.178 32.000 5.89 0.00 0.00 2.12
111 112 9.325150 CAACAAAAGTTATATTGTTCGATTCGT 57.675 29.630 5.89 0.00 45.31 3.85
112 113 9.536558 TCAACAAAAGTTATATTGTTCGATTCG 57.463 29.630 0.00 0.00 45.31 3.34
116 117 9.605955 CATGTCAACAAAAGTTATATTGTTCGA 57.394 29.630 1.94 2.22 45.31 3.71
117 118 8.365210 GCATGTCAACAAAAGTTATATTGTTCG 58.635 33.333 1.94 0.37 45.31 3.95
118 119 9.190858 TGCATGTCAACAAAAGTTATATTGTTC 57.809 29.630 1.94 0.00 45.31 3.18
120 121 8.359642 AGTGCATGTCAACAAAAGTTATATTGT 58.640 29.630 0.00 0.00 41.31 2.71
121 122 8.746922 AGTGCATGTCAACAAAAGTTATATTG 57.253 30.769 0.00 0.00 0.00 1.90
123 124 9.840427 GTTAGTGCATGTCAACAAAAGTTATAT 57.160 29.630 0.00 0.00 0.00 0.86
124 125 8.841300 TGTTAGTGCATGTCAACAAAAGTTATA 58.159 29.630 0.00 0.00 0.00 0.98
125 126 7.711846 TGTTAGTGCATGTCAACAAAAGTTAT 58.288 30.769 0.00 0.00 0.00 1.89
126 127 7.089770 TGTTAGTGCATGTCAACAAAAGTTA 57.910 32.000 0.00 0.00 0.00 2.24
127 128 5.960113 TGTTAGTGCATGTCAACAAAAGTT 58.040 33.333 0.00 0.00 0.00 2.66
128 129 5.574891 TGTTAGTGCATGTCAACAAAAGT 57.425 34.783 0.00 0.00 0.00 2.66
129 130 7.467557 AAATGTTAGTGCATGTCAACAAAAG 57.532 32.000 8.71 0.00 34.79 2.27
130 131 7.840342 AAAATGTTAGTGCATGTCAACAAAA 57.160 28.000 8.71 0.00 34.79 2.44
131 132 9.190858 GATAAAATGTTAGTGCATGTCAACAAA 57.809 29.630 8.71 0.00 34.79 2.83
132 133 8.355913 TGATAAAATGTTAGTGCATGTCAACAA 58.644 29.630 8.71 0.00 34.79 2.83
133 134 7.880105 TGATAAAATGTTAGTGCATGTCAACA 58.120 30.769 0.00 0.00 35.53 3.33
134 135 8.023128 ACTGATAAAATGTTAGTGCATGTCAAC 58.977 33.333 0.00 0.00 0.00 3.18
135 136 8.109705 ACTGATAAAATGTTAGTGCATGTCAA 57.890 30.769 0.00 0.00 0.00 3.18
136 137 7.686438 ACTGATAAAATGTTAGTGCATGTCA 57.314 32.000 0.00 0.00 0.00 3.58
148 149 9.308000 TGACCCAAGATTTAACTGATAAAATGT 57.692 29.630 0.00 0.00 37.06 2.71
162 163 9.898152 TTTGTTCTAAATTTTGACCCAAGATTT 57.102 25.926 1.61 11.25 39.95 2.17
167 168 9.549078 GGTAATTTGTTCTAAATTTTGACCCAA 57.451 29.630 1.61 5.97 32.64 4.12
168 169 8.705594 TGGTAATTTGTTCTAAATTTTGACCCA 58.294 29.630 1.61 0.33 30.38 4.51
169 170 9.719355 ATGGTAATTTGTTCTAAATTTTGACCC 57.281 29.630 1.61 0.00 30.38 4.46
176 177 9.533831 AGTCCTCATGGTAATTTGTTCTAAATT 57.466 29.630 0.00 0.00 34.55 1.82
184 185 9.185680 GGTTTATTAGTCCTCATGGTAATTTGT 57.814 33.333 0.00 0.00 34.23 2.83
185 186 9.184523 TGGTTTATTAGTCCTCATGGTAATTTG 57.815 33.333 0.00 0.00 34.23 2.32
186 187 9.408648 CTGGTTTATTAGTCCTCATGGTAATTT 57.591 33.333 0.00 0.00 34.23 1.82
187 188 7.998964 CCTGGTTTATTAGTCCTCATGGTAATT 59.001 37.037 0.00 0.00 34.23 1.40
188 189 7.349859 TCCTGGTTTATTAGTCCTCATGGTAAT 59.650 37.037 0.00 0.00 34.23 1.89
189 190 6.674861 TCCTGGTTTATTAGTCCTCATGGTAA 59.325 38.462 0.00 0.00 34.23 2.85
190 191 6.206787 TCCTGGTTTATTAGTCCTCATGGTA 58.793 40.000 0.00 0.00 34.23 3.25
191 192 5.036916 TCCTGGTTTATTAGTCCTCATGGT 58.963 41.667 0.00 0.00 34.23 3.55
192 193 5.630415 TCCTGGTTTATTAGTCCTCATGG 57.370 43.478 0.00 0.00 0.00 3.66
193 194 5.928839 CGATCCTGGTTTATTAGTCCTCATG 59.071 44.000 0.00 0.00 0.00 3.07
194 195 5.012148 CCGATCCTGGTTTATTAGTCCTCAT 59.988 44.000 0.00 0.00 0.00 2.90
195 196 4.344102 CCGATCCTGGTTTATTAGTCCTCA 59.656 45.833 0.00 0.00 0.00 3.86
196 197 4.587684 TCCGATCCTGGTTTATTAGTCCTC 59.412 45.833 0.00 0.00 0.00 3.71
197 198 4.553678 TCCGATCCTGGTTTATTAGTCCT 58.446 43.478 0.00 0.00 0.00 3.85
198 199 4.262506 CCTCCGATCCTGGTTTATTAGTCC 60.263 50.000 0.00 0.00 0.00 3.85
199 200 4.344390 ACCTCCGATCCTGGTTTATTAGTC 59.656 45.833 0.00 0.00 0.00 2.59
200 201 4.296056 ACCTCCGATCCTGGTTTATTAGT 58.704 43.478 0.00 0.00 0.00 2.24
201 202 4.957684 ACCTCCGATCCTGGTTTATTAG 57.042 45.455 0.00 0.00 0.00 1.73
202 203 5.461327 ACTACCTCCGATCCTGGTTTATTA 58.539 41.667 4.58 0.00 35.48 0.98
203 204 4.296056 ACTACCTCCGATCCTGGTTTATT 58.704 43.478 4.58 0.00 35.48 1.40
204 205 3.924922 ACTACCTCCGATCCTGGTTTAT 58.075 45.455 4.58 0.00 35.48 1.40
205 206 3.393426 ACTACCTCCGATCCTGGTTTA 57.607 47.619 4.58 0.00 35.48 2.01
206 207 2.249309 ACTACCTCCGATCCTGGTTT 57.751 50.000 4.58 0.00 35.48 3.27
207 208 2.024655 TGTACTACCTCCGATCCTGGTT 60.025 50.000 4.58 0.00 35.48 3.67
208 209 1.567649 TGTACTACCTCCGATCCTGGT 59.432 52.381 0.00 4.66 37.83 4.00
209 210 2.359981 TGTACTACCTCCGATCCTGG 57.640 55.000 0.00 0.00 0.00 4.45
210 211 3.487372 TGATGTACTACCTCCGATCCTG 58.513 50.000 0.00 0.00 0.00 3.86
211 212 3.878237 TGATGTACTACCTCCGATCCT 57.122 47.619 0.00 0.00 0.00 3.24
212 213 4.094590 CGTATGATGTACTACCTCCGATCC 59.905 50.000 0.00 0.00 0.00 3.36
213 214 4.094590 CCGTATGATGTACTACCTCCGATC 59.905 50.000 0.00 0.00 0.00 3.69
214 215 4.008330 CCGTATGATGTACTACCTCCGAT 58.992 47.826 0.00 0.00 0.00 4.18
215 216 3.405831 CCGTATGATGTACTACCTCCGA 58.594 50.000 0.00 0.00 0.00 4.55
216 217 2.486982 CCCGTATGATGTACTACCTCCG 59.513 54.545 0.00 0.00 0.00 4.63
217 218 2.230750 GCCCGTATGATGTACTACCTCC 59.769 54.545 0.00 0.00 0.00 4.30
218 219 3.057456 CAGCCCGTATGATGTACTACCTC 60.057 52.174 0.00 0.00 0.00 3.85
219 220 2.891580 CAGCCCGTATGATGTACTACCT 59.108 50.000 0.00 0.00 0.00 3.08
220 221 2.889045 TCAGCCCGTATGATGTACTACC 59.111 50.000 0.00 0.00 0.00 3.18
221 222 4.486090 CATCAGCCCGTATGATGTACTAC 58.514 47.826 11.54 0.00 45.84 2.73
222 223 4.783764 CATCAGCCCGTATGATGTACTA 57.216 45.455 11.54 0.00 45.84 1.82
223 224 3.667497 CATCAGCCCGTATGATGTACT 57.333 47.619 11.54 0.00 45.84 2.73
265 266 2.106683 CGAAGCCCACCGTTGATCC 61.107 63.158 0.00 0.00 0.00 3.36
266 267 1.079405 TCGAAGCCCACCGTTGATC 60.079 57.895 0.00 0.00 0.00 2.92
267 268 1.079127 CTCGAAGCCCACCGTTGAT 60.079 57.895 0.00 0.00 0.00 2.57
268 269 2.342279 CTCGAAGCCCACCGTTGA 59.658 61.111 0.00 0.00 0.00 3.18
269 270 3.423154 GCTCGAAGCCCACCGTTG 61.423 66.667 0.00 0.00 34.48 4.10
270 271 2.951475 TTTGCTCGAAGCCCACCGTT 62.951 55.000 4.73 0.00 41.51 4.44
271 272 2.748058 ATTTGCTCGAAGCCCACCGT 62.748 55.000 4.73 0.00 41.51 4.83
272 273 1.982073 GATTTGCTCGAAGCCCACCG 61.982 60.000 4.73 0.00 41.51 4.94
273 274 0.960364 TGATTTGCTCGAAGCCCACC 60.960 55.000 4.73 0.00 41.51 4.61
274 275 0.449388 CTGATTTGCTCGAAGCCCAC 59.551 55.000 4.73 0.00 41.51 4.61
275 276 0.036732 ACTGATTTGCTCGAAGCCCA 59.963 50.000 4.73 0.00 41.51 5.36
276 277 1.135575 CAACTGATTTGCTCGAAGCCC 60.136 52.381 4.73 0.00 41.51 5.19
277 278 1.135575 CCAACTGATTTGCTCGAAGCC 60.136 52.381 4.73 0.00 41.51 4.35
278 279 1.537202 ACCAACTGATTTGCTCGAAGC 59.463 47.619 0.00 0.00 42.82 3.86
279 280 3.250762 TGAACCAACTGATTTGCTCGAAG 59.749 43.478 0.00 0.00 33.34 3.79
280 281 3.210227 TGAACCAACTGATTTGCTCGAA 58.790 40.909 0.00 0.00 33.34 3.71
281 282 2.807967 CTGAACCAACTGATTTGCTCGA 59.192 45.455 0.00 0.00 33.34 4.04
282 283 2.095567 CCTGAACCAACTGATTTGCTCG 60.096 50.000 0.00 0.00 33.34 5.03
283 284 3.149196 TCCTGAACCAACTGATTTGCTC 58.851 45.455 0.00 0.00 33.34 4.26
284 285 3.228188 TCCTGAACCAACTGATTTGCT 57.772 42.857 0.00 0.00 33.34 3.91
285 286 3.507233 TGATCCTGAACCAACTGATTTGC 59.493 43.478 0.00 0.00 33.34 3.68
286 287 5.464168 GTTGATCCTGAACCAACTGATTTG 58.536 41.667 0.00 0.00 37.69 2.32
287 288 4.216257 CGTTGATCCTGAACCAACTGATTT 59.784 41.667 0.00 0.00 38.32 2.17
288 289 3.753272 CGTTGATCCTGAACCAACTGATT 59.247 43.478 0.00 0.00 38.32 2.57
289 290 3.338249 CGTTGATCCTGAACCAACTGAT 58.662 45.455 0.00 0.00 38.32 2.90
290 291 2.549992 CCGTTGATCCTGAACCAACTGA 60.550 50.000 0.00 0.00 38.32 3.41
291 292 1.806542 CCGTTGATCCTGAACCAACTG 59.193 52.381 0.00 0.00 38.32 3.16
292 293 1.420138 ACCGTTGATCCTGAACCAACT 59.580 47.619 0.00 0.00 38.32 3.16
293 294 1.535462 CACCGTTGATCCTGAACCAAC 59.465 52.381 0.00 0.00 37.42 3.77
294 295 1.544537 CCACCGTTGATCCTGAACCAA 60.545 52.381 0.00 0.00 0.00 3.67
295 296 0.036164 CCACCGTTGATCCTGAACCA 59.964 55.000 0.00 0.00 0.00 3.67
296 297 0.676782 CCCACCGTTGATCCTGAACC 60.677 60.000 0.00 0.00 0.00 3.62
297 298 1.305930 GCCCACCGTTGATCCTGAAC 61.306 60.000 0.00 0.00 0.00 3.18
298 299 1.002624 GCCCACCGTTGATCCTGAA 60.003 57.895 0.00 0.00 0.00 3.02
299 300 1.918293 AGCCCACCGTTGATCCTGA 60.918 57.895 0.00 0.00 0.00 3.86
300 301 1.746615 CAGCCCACCGTTGATCCTG 60.747 63.158 0.00 0.00 0.00 3.86
301 302 1.274703 ATCAGCCCACCGTTGATCCT 61.275 55.000 0.00 0.00 37.89 3.24
323 324 7.801547 AATCATAAATCAACTGTTTTGCTCG 57.198 32.000 0.00 0.00 0.00 5.03
331 332 5.437060 ACCCGCTAATCATAAATCAACTGT 58.563 37.500 0.00 0.00 0.00 3.55
845 3976 1.550976 CATCCTCTAATCTACCCGGCC 59.449 57.143 0.00 0.00 0.00 6.13
846 3977 1.066787 GCATCCTCTAATCTACCCGGC 60.067 57.143 0.00 0.00 0.00 6.13
847 3978 2.028930 GTGCATCCTCTAATCTACCCGG 60.029 54.545 0.00 0.00 0.00 5.73
848 3979 2.628178 TGTGCATCCTCTAATCTACCCG 59.372 50.000 0.00 0.00 0.00 5.28
926 4072 2.780643 CATGAGTTGCGCGTCTGG 59.219 61.111 8.43 0.00 0.00 3.86
974 4123 2.849294 AGCTGACTGAGAAACCTTCC 57.151 50.000 0.00 0.00 0.00 3.46
1110 4259 2.588034 GCGACCGCCCTAATGACC 60.588 66.667 2.55 0.00 34.56 4.02
1190 4339 0.968901 CATGAGCTTGGCCATGGTGT 60.969 55.000 26.25 12.72 35.32 4.16
1218 4367 0.248990 CAACACATGCACGCACCTTT 60.249 50.000 0.00 0.00 0.00 3.11
1459 4620 4.400961 GCCAGAGCCCTCGCACTT 62.401 66.667 0.00 0.00 33.17 3.16
1486 4647 2.742372 AGCACGCCGTCCATTGTC 60.742 61.111 0.00 0.00 0.00 3.18
1543 4704 2.674796 AATACGAGAAGAGCACCACC 57.325 50.000 0.00 0.00 0.00 4.61
1561 4722 3.093814 TCGACACAAGATAGGCCTGTAA 58.906 45.455 17.99 0.00 0.00 2.41
1612 4773 3.124560 GAGAAAAGGCTATCTACCGTGC 58.875 50.000 3.00 0.00 0.00 5.34
1621 4782 8.763984 ATCATCAAATGAAGAGAAAAGGCTAT 57.236 30.769 0.00 0.00 43.50 2.97
1720 4881 2.975489 CAGGCACTATAAGACCTGGGAT 59.025 50.000 0.00 0.00 44.90 3.85
1814 4975 3.435566 GCTTGCTGATGAATGACACATG 58.564 45.455 0.00 0.00 0.00 3.21
1851 5013 6.015772 TGGCAGTGCGATATCTATAGTGTAAA 60.016 38.462 9.45 0.00 0.00 2.01
1873 5035 6.407202 TGATAGAGTTTTCCTACTTTCTGGC 58.593 40.000 0.00 0.00 0.00 4.85
1983 5145 6.697641 TCTACCAGGTAAATGAAACCTTCT 57.302 37.500 0.00 0.00 45.26 2.85
2027 5189 5.067954 AGCTGGTAACTTTAAATGAACGGT 58.932 37.500 0.00 0.00 37.61 4.83
2089 5251 0.036952 CTCCATTGACGCTCACCTGT 60.037 55.000 0.00 0.00 0.00 4.00
2239 5401 9.947669 GACACTAGATCACGTGTATAAACTAAT 57.052 33.333 16.51 0.00 43.80 1.73
2330 5494 3.349488 GGTTTGTCAGTAACCTGCAAC 57.651 47.619 0.00 0.00 41.46 4.17
2410 5576 7.775120 AGCTCTTGGGACACAATTTAAATATG 58.225 34.615 0.01 6.03 39.29 1.78
2436 5602 7.759489 TTGTAATTAAGCTGTGGATCTTGTT 57.241 32.000 0.00 0.00 0.00 2.83
2557 5724 6.176896 GCCTCTAGTCTTTTCAATCCTTCTT 58.823 40.000 0.00 0.00 0.00 2.52
2634 5801 5.682862 CGATCAATTTATTTACTGGTGCTGC 59.317 40.000 0.00 0.00 0.00 5.25
2665 5832 6.537355 TCTAGCCGGAGTAGCTTTATTACTA 58.463 40.000 5.05 0.00 41.83 1.82
2688 5855 8.788409 TGCTAATAATATGATGACGATCGATC 57.212 34.615 24.34 15.68 0.00 3.69
2689 5856 9.189723 CATGCTAATAATATGATGACGATCGAT 57.810 33.333 24.34 5.40 0.00 3.59
2690 5857 8.190784 ACATGCTAATAATATGATGACGATCGA 58.809 33.333 24.34 0.00 0.00 3.59
2691 5858 8.264632 CACATGCTAATAATATGATGACGATCG 58.735 37.037 14.88 14.88 0.00 3.69
2704 5871 8.993121 CGATTTCTAACTCCACATGCTAATAAT 58.007 33.333 0.00 0.00 0.00 1.28
2709 5876 4.404394 TCCGATTTCTAACTCCACATGCTA 59.596 41.667 0.00 0.00 0.00 3.49
2739 5906 3.395639 GTTGAACTGGAATCACGGTACA 58.604 45.455 0.00 0.00 0.00 2.90
2740 5907 2.410730 CGTTGAACTGGAATCACGGTAC 59.589 50.000 0.00 0.00 0.00 3.34
2748 5915 4.673441 CGATCTACTCGTTGAACTGGAAT 58.327 43.478 0.00 0.00 42.56 3.01
2781 5948 1.940613 CATCACCGGCTAAAGGCTAAC 59.059 52.381 0.00 0.00 41.46 2.34
2791 5958 2.284625 TCAGGACCATCACCGGCT 60.285 61.111 0.00 0.00 0.00 5.52
2814 5985 7.875327 ATACACGGCTTATTCCAATAAACTT 57.125 32.000 0.00 0.00 31.03 2.66
2819 5990 9.999660 TTTGTATATACACGGCTTATTCCAATA 57.000 29.630 15.20 0.00 35.64 1.90
2848 6033 2.429610 GAGCCATGGATTCAAGCACATT 59.570 45.455 18.40 0.00 0.00 2.71
2849 6034 2.029623 GAGCCATGGATTCAAGCACAT 58.970 47.619 18.40 0.00 0.00 3.21
2866 6051 4.324402 CACATCTTGTTTTATTTGCCGAGC 59.676 41.667 0.00 0.00 0.00 5.03
2893 6078 1.470098 GTGAAGCATCAACGGAAGCAT 59.530 47.619 0.00 0.00 40.12 3.79
2894 6079 0.874390 GTGAAGCATCAACGGAAGCA 59.126 50.000 0.00 0.00 40.12 3.91
2895 6080 1.160137 AGTGAAGCATCAACGGAAGC 58.840 50.000 0.00 0.00 37.30 3.86
2896 6081 5.551760 AAATAGTGAAGCATCAACGGAAG 57.448 39.130 0.00 0.00 37.30 3.46
2897 6082 5.957842 AAAATAGTGAAGCATCAACGGAA 57.042 34.783 0.00 0.00 37.30 4.30
2898 6083 5.240623 ACAAAAATAGTGAAGCATCAACGGA 59.759 36.000 0.00 0.00 37.30 4.69
2899 6084 5.460646 ACAAAAATAGTGAAGCATCAACGG 58.539 37.500 0.00 0.00 37.30 4.44
2900 6085 6.857964 AGAACAAAAATAGTGAAGCATCAACG 59.142 34.615 0.00 0.00 37.30 4.10
2901 6086 8.078596 AGAGAACAAAAATAGTGAAGCATCAAC 58.921 33.333 0.00 0.00 37.30 3.18
2902 6087 8.169977 AGAGAACAAAAATAGTGAAGCATCAA 57.830 30.769 0.00 0.00 37.30 2.57
2903 6088 7.445096 TGAGAGAACAAAAATAGTGAAGCATCA 59.555 33.333 0.00 0.00 0.00 3.07
2904 6089 7.810658 TGAGAGAACAAAAATAGTGAAGCATC 58.189 34.615 0.00 0.00 0.00 3.91
2905 6090 7.446625 ACTGAGAGAACAAAAATAGTGAAGCAT 59.553 33.333 0.00 0.00 0.00 3.79
2906 6091 6.767902 ACTGAGAGAACAAAAATAGTGAAGCA 59.232 34.615 0.00 0.00 0.00 3.91
2907 6092 7.074502 CACTGAGAGAACAAAAATAGTGAAGC 58.925 38.462 0.00 0.00 37.15 3.86
2908 6093 7.041508 AGCACTGAGAGAACAAAAATAGTGAAG 60.042 37.037 0.00 0.00 37.15 3.02
2909 6094 6.767902 AGCACTGAGAGAACAAAAATAGTGAA 59.232 34.615 0.00 0.00 37.15 3.18
2910 6095 6.203530 CAGCACTGAGAGAACAAAAATAGTGA 59.796 38.462 0.00 0.00 37.15 3.41
2911 6096 6.203530 TCAGCACTGAGAGAACAAAAATAGTG 59.796 38.462 0.00 0.00 37.82 2.74
2912 6097 6.291377 TCAGCACTGAGAGAACAAAAATAGT 58.709 36.000 0.00 0.00 34.14 2.12
2913 6098 6.791887 TCAGCACTGAGAGAACAAAAATAG 57.208 37.500 0.00 0.00 34.14 1.73
2914 6099 7.229306 ACATTCAGCACTGAGAGAACAAAAATA 59.771 33.333 0.00 0.00 41.13 1.40
2915 6100 6.040166 ACATTCAGCACTGAGAGAACAAAAAT 59.960 34.615 0.00 0.00 41.13 1.82
2916 6101 5.357878 ACATTCAGCACTGAGAGAACAAAAA 59.642 36.000 0.00 0.00 41.13 1.94
2917 6102 4.883585 ACATTCAGCACTGAGAGAACAAAA 59.116 37.500 0.00 0.00 41.13 2.44
2918 6103 4.454678 ACATTCAGCACTGAGAGAACAAA 58.545 39.130 0.00 0.00 41.13 2.83
2919 6104 4.077300 ACATTCAGCACTGAGAGAACAA 57.923 40.909 0.00 0.00 41.13 2.83
2920 6105 3.758755 ACATTCAGCACTGAGAGAACA 57.241 42.857 0.00 0.00 41.13 3.18
2921 6106 4.781071 CAAACATTCAGCACTGAGAGAAC 58.219 43.478 0.00 0.00 41.13 3.01
2922 6107 3.251729 GCAAACATTCAGCACTGAGAGAA 59.748 43.478 0.00 0.00 41.13 2.87
2923 6108 2.810274 GCAAACATTCAGCACTGAGAGA 59.190 45.455 0.00 0.00 41.13 3.10
2924 6109 2.812591 AGCAAACATTCAGCACTGAGAG 59.187 45.455 0.00 0.75 41.13 3.20
2925 6110 2.551032 CAGCAAACATTCAGCACTGAGA 59.449 45.455 0.00 0.00 41.13 3.27
2926 6111 2.351447 CCAGCAAACATTCAGCACTGAG 60.351 50.000 0.00 0.00 41.13 3.35
2927 6112 1.610038 CCAGCAAACATTCAGCACTGA 59.390 47.619 0.00 0.00 37.91 3.41
2928 6113 1.933500 GCCAGCAAACATTCAGCACTG 60.934 52.381 0.00 0.00 0.00 3.66
2929 6114 0.316204 GCCAGCAAACATTCAGCACT 59.684 50.000 0.00 0.00 0.00 4.40
2930 6115 0.032403 TGCCAGCAAACATTCAGCAC 59.968 50.000 0.00 0.00 0.00 4.40
2931 6116 0.751452 TTGCCAGCAAACATTCAGCA 59.249 45.000 1.81 0.00 32.44 4.41
2932 6117 1.868469 TTTGCCAGCAAACATTCAGC 58.132 45.000 13.57 0.00 40.51 4.26
2933 6118 3.246699 CACTTTTGCCAGCAAACATTCAG 59.753 43.478 16.95 13.34 44.39 3.02
2934 6119 3.118847 TCACTTTTGCCAGCAAACATTCA 60.119 39.130 16.95 2.10 44.39 2.57
2935 6120 3.245990 GTCACTTTTGCCAGCAAACATTC 59.754 43.478 16.95 4.50 44.39 2.67
2936 6121 3.197265 GTCACTTTTGCCAGCAAACATT 58.803 40.909 16.95 2.33 44.39 2.71
2937 6122 2.483538 GGTCACTTTTGCCAGCAAACAT 60.484 45.455 16.95 5.95 44.39 2.71
2938 6123 1.134848 GGTCACTTTTGCCAGCAAACA 60.135 47.619 16.95 8.19 44.39 2.83
2939 6124 1.570813 GGTCACTTTTGCCAGCAAAC 58.429 50.000 16.95 6.46 44.39 2.93
2940 6125 0.102120 CGGTCACTTTTGCCAGCAAA 59.898 50.000 13.57 13.57 43.23 3.68
2941 6126 1.732917 CGGTCACTTTTGCCAGCAA 59.267 52.632 0.00 0.00 0.00 3.91
2942 6127 2.844451 GCGGTCACTTTTGCCAGCA 61.844 57.895 0.00 0.00 0.00 4.41
2943 6128 2.050077 GCGGTCACTTTTGCCAGC 60.050 61.111 0.00 0.00 0.00 4.85
2944 6129 2.252260 CGCGGTCACTTTTGCCAG 59.748 61.111 0.00 0.00 0.00 4.85
2945 6130 3.959975 GCGCGGTCACTTTTGCCA 61.960 61.111 8.83 0.00 0.00 4.92
2957 6142 1.821241 CTCATGATGTTACCGCGCGG 61.821 60.000 44.88 44.88 42.03 6.46
2958 6143 0.869880 TCTCATGATGTTACCGCGCG 60.870 55.000 25.67 25.67 0.00 6.86
2959 6144 0.577269 GTCTCATGATGTTACCGCGC 59.423 55.000 0.00 0.00 0.00 6.86
2960 6145 0.846401 CGTCTCATGATGTTACCGCG 59.154 55.000 0.00 0.00 0.00 6.46
2961 6146 1.588404 CACGTCTCATGATGTTACCGC 59.412 52.381 0.00 0.00 40.17 5.68
2962 6147 1.588404 GCACGTCTCATGATGTTACCG 59.412 52.381 0.00 0.00 40.17 4.02
2963 6148 2.616960 TGCACGTCTCATGATGTTACC 58.383 47.619 0.00 0.00 40.17 2.85
2964 6149 3.544834 GCATGCACGTCTCATGATGTTAC 60.545 47.826 23.85 7.63 42.84 2.50
2965 6150 2.609002 GCATGCACGTCTCATGATGTTA 59.391 45.455 23.85 0.00 42.84 2.41
2966 6151 1.399440 GCATGCACGTCTCATGATGTT 59.601 47.619 23.85 0.00 42.84 2.71
2967 6152 1.012086 GCATGCACGTCTCATGATGT 58.988 50.000 23.85 0.00 42.84 3.06
2968 6153 1.296727 AGCATGCACGTCTCATGATG 58.703 50.000 21.98 6.73 42.84 3.07
2969 6154 1.669265 CAAGCATGCACGTCTCATGAT 59.331 47.619 21.98 17.87 42.84 2.45
2970 6155 1.081094 CAAGCATGCACGTCTCATGA 58.919 50.000 21.98 0.00 42.84 3.07
2971 6156 1.081094 TCAAGCATGCACGTCTCATG 58.919 50.000 21.98 18.19 43.02 3.07
2972 6157 1.669265 CATCAAGCATGCACGTCTCAT 59.331 47.619 21.98 0.00 0.00 2.90
2973 6158 1.081094 CATCAAGCATGCACGTCTCA 58.919 50.000 21.98 0.00 0.00 3.27
2974 6159 3.891786 CATCAAGCATGCACGTCTC 57.108 52.632 21.98 0.00 0.00 3.36
3029 6214 6.576185 AGGCCTGCATATGAAATAAACAAAG 58.424 36.000 3.11 0.00 29.06 2.77
3033 6218 6.147864 TGAAGGCCTGCATATGAAATAAAC 57.852 37.500 10.33 0.00 29.06 2.01
3036 6221 9.752228 TTTATATGAAGGCCTGCATATGAAATA 57.248 29.630 40.42 25.78 38.00 1.40
3037 6222 8.526147 GTTTATATGAAGGCCTGCATATGAAAT 58.474 33.333 40.42 26.67 38.00 2.17
3038 6223 7.505248 TGTTTATATGAAGGCCTGCATATGAAA 59.495 33.333 40.42 32.11 38.00 2.69
3039 6224 7.003482 TGTTTATATGAAGGCCTGCATATGAA 58.997 34.615 40.42 36.55 38.00 2.57
3040 6225 6.430925 GTGTTTATATGAAGGCCTGCATATGA 59.569 38.462 40.42 34.09 38.00 2.15
3041 6226 6.207221 TGTGTTTATATGAAGGCCTGCATATG 59.793 38.462 40.42 0.00 38.00 1.78
3045 6230 3.694072 GTGTGTTTATATGAAGGCCTGCA 59.306 43.478 18.26 18.26 0.00 4.41
3046 6231 3.694072 TGTGTGTTTATATGAAGGCCTGC 59.306 43.478 5.69 4.07 0.00 4.85
3047 6232 7.566760 TTATGTGTGTTTATATGAAGGCCTG 57.433 36.000 5.69 0.00 0.00 4.85
3048 6233 8.766994 ATTTATGTGTGTTTATATGAAGGCCT 57.233 30.769 0.00 0.00 0.00 5.19
3049 6234 9.463443 GAATTTATGTGTGTTTATATGAAGGCC 57.537 33.333 0.00 0.00 0.00 5.19
3069 6254 7.330946 CGCTCACGAATTATAGGGATGAATTTA 59.669 37.037 0.00 0.00 43.93 1.40
3070 6255 6.147821 CGCTCACGAATTATAGGGATGAATTT 59.852 38.462 0.00 0.00 43.93 1.82
3071 6256 5.639506 CGCTCACGAATTATAGGGATGAATT 59.360 40.000 0.00 0.00 43.93 2.17
3072 6257 5.171476 CGCTCACGAATTATAGGGATGAAT 58.829 41.667 0.00 0.00 43.93 2.57
3074 6259 4.174411 CGCTCACGAATTATAGGGATGA 57.826 45.455 0.00 0.00 43.93 2.92
3106 7713 9.454585 AGAATAATTATTTCGCATGACATGTTG 57.545 29.630 16.62 9.88 0.00 3.33
3136 7743 5.448654 ACAACAATGTATGATGCCACCTAT 58.551 37.500 0.00 0.00 38.24 2.57
3138 7745 3.696051 GACAACAATGTATGATGCCACCT 59.304 43.478 0.00 0.00 40.74 4.00
3139 7746 3.696051 AGACAACAATGTATGATGCCACC 59.304 43.478 0.00 0.00 40.74 4.61
3143 7750 5.032863 GCTGAAGACAACAATGTATGATGC 58.967 41.667 0.00 0.00 40.74 3.91
3148 7755 8.239314 CACTAATTGCTGAAGACAACAATGTAT 58.761 33.333 0.00 0.00 40.47 2.29
3159 7766 7.394016 TCTTTACCATCACTAATTGCTGAAGA 58.606 34.615 0.00 0.00 0.00 2.87
3170 7777 7.360113 TGACATAGCATCTTTACCATCACTA 57.640 36.000 0.00 0.00 0.00 2.74
3184 7791 5.255687 TGTTGGTTTCAGATGACATAGCAT 58.744 37.500 0.00 0.00 0.00 3.79
3193 7800 2.353011 GGGCACATGTTGGTTTCAGATG 60.353 50.000 0.00 0.00 0.00 2.90
3198 7805 1.372872 GCGGGCACATGTTGGTTTC 60.373 57.895 0.00 0.00 0.00 2.78
3257 7864 9.903190 AAAATCCCTCCATTCCAATATCTTATT 57.097 29.630 0.00 0.00 0.00 1.40
3258 7865 9.903190 AAAAATCCCTCCATTCCAATATCTTAT 57.097 29.630 0.00 0.00 0.00 1.73
3261 7868 7.952368 CCTAAAAATCCCTCCATTCCAATATCT 59.048 37.037 0.00 0.00 0.00 1.98
3262 7869 7.950124 TCCTAAAAATCCCTCCATTCCAATATC 59.050 37.037 0.00 0.00 0.00 1.63
3263 7870 7.730332 GTCCTAAAAATCCCTCCATTCCAATAT 59.270 37.037 0.00 0.00 0.00 1.28
3265 7872 5.899547 GTCCTAAAAATCCCTCCATTCCAAT 59.100 40.000 0.00 0.00 0.00 3.16
3267 7874 4.627741 CGTCCTAAAAATCCCTCCATTCCA 60.628 45.833 0.00 0.00 0.00 3.53
3268 7875 3.883489 CGTCCTAAAAATCCCTCCATTCC 59.117 47.826 0.00 0.00 0.00 3.01
3269 7876 4.777463 TCGTCCTAAAAATCCCTCCATTC 58.223 43.478 0.00 0.00 0.00 2.67
3270 7877 4.855298 TCGTCCTAAAAATCCCTCCATT 57.145 40.909 0.00 0.00 0.00 3.16
3271 7878 4.855298 TTCGTCCTAAAAATCCCTCCAT 57.145 40.909 0.00 0.00 0.00 3.41
3273 7880 6.262496 CCTAATTTCGTCCTAAAAATCCCTCC 59.738 42.308 0.00 0.00 0.00 4.30
3274 7881 7.052248 TCCTAATTTCGTCCTAAAAATCCCTC 58.948 38.462 0.00 0.00 0.00 4.30
3275 7882 6.965607 TCCTAATTTCGTCCTAAAAATCCCT 58.034 36.000 0.00 0.00 0.00 4.20
3276 7883 7.284716 ACATCCTAATTTCGTCCTAAAAATCCC 59.715 37.037 0.00 0.00 0.00 3.85
3277 7884 8.129211 CACATCCTAATTTCGTCCTAAAAATCC 58.871 37.037 0.00 0.00 0.00 3.01
3278 7885 7.644157 GCACATCCTAATTTCGTCCTAAAAATC 59.356 37.037 0.00 0.00 0.00 2.17
3279 7886 7.416326 GGCACATCCTAATTTCGTCCTAAAAAT 60.416 37.037 0.00 0.00 0.00 1.82
3280 7887 6.127842 GGCACATCCTAATTTCGTCCTAAAAA 60.128 38.462 0.00 0.00 0.00 1.94
3282 7889 4.879545 GGCACATCCTAATTTCGTCCTAAA 59.120 41.667 0.00 0.00 0.00 1.85
3283 7890 4.163458 AGGCACATCCTAATTTCGTCCTAA 59.837 41.667 0.00 0.00 45.41 2.69
3284 7891 3.709653 AGGCACATCCTAATTTCGTCCTA 59.290 43.478 0.00 0.00 45.41 2.94
3286 7893 2.919228 AGGCACATCCTAATTTCGTCC 58.081 47.619 0.00 0.00 45.41 4.79
3287 7894 3.065371 CCAAGGCACATCCTAATTTCGTC 59.935 47.826 0.00 0.00 46.94 4.20
3288 7895 3.016736 CCAAGGCACATCCTAATTTCGT 58.983 45.455 0.00 0.00 46.94 3.85
3289 7896 3.016736 ACCAAGGCACATCCTAATTTCG 58.983 45.455 0.00 0.00 46.94 3.46
3290 7897 6.330278 GTTAACCAAGGCACATCCTAATTTC 58.670 40.000 0.00 0.00 46.94 2.17
3291 7898 5.105917 CGTTAACCAAGGCACATCCTAATTT 60.106 40.000 0.00 0.00 46.94 1.82
3293 7900 3.945285 CGTTAACCAAGGCACATCCTAAT 59.055 43.478 0.00 0.00 46.94 1.73
3297 7904 1.199097 CACGTTAACCAAGGCACATCC 59.801 52.381 0.00 0.00 0.00 3.51
3298 7905 1.401018 GCACGTTAACCAAGGCACATC 60.401 52.381 0.00 0.00 0.00 3.06
3299 7906 0.596082 GCACGTTAACCAAGGCACAT 59.404 50.000 0.00 0.00 0.00 3.21
3300 7907 0.464735 AGCACGTTAACCAAGGCACA 60.465 50.000 0.00 0.00 0.00 4.57
3301 7908 0.040425 CAGCACGTTAACCAAGGCAC 60.040 55.000 0.00 0.00 0.00 5.01
3302 7909 0.179043 TCAGCACGTTAACCAAGGCA 60.179 50.000 0.00 0.00 0.00 4.75
3304 7911 3.701532 TTTTCAGCACGTTAACCAAGG 57.298 42.857 0.00 0.00 0.00 3.61
3305 7912 7.061789 GGAATTATTTTCAGCACGTTAACCAAG 59.938 37.037 0.00 0.00 0.00 3.61
3306 7913 6.864165 GGAATTATTTTCAGCACGTTAACCAA 59.136 34.615 0.00 0.00 0.00 3.67
3307 7914 6.207810 AGGAATTATTTTCAGCACGTTAACCA 59.792 34.615 0.00 0.00 0.00 3.67
3308 7915 6.617879 AGGAATTATTTTCAGCACGTTAACC 58.382 36.000 0.00 0.00 0.00 2.85
3309 7916 8.515473 AAAGGAATTATTTTCAGCACGTTAAC 57.485 30.769 0.00 0.00 0.00 2.01
3310 7917 7.810759 GGAAAGGAATTATTTTCAGCACGTTAA 59.189 33.333 13.23 0.00 35.51 2.01
3311 7918 7.175990 AGGAAAGGAATTATTTTCAGCACGTTA 59.824 33.333 13.23 0.00 35.51 3.18
3313 7920 5.476945 AGGAAAGGAATTATTTTCAGCACGT 59.523 36.000 13.23 0.00 35.51 4.49
3314 7921 5.954335 AGGAAAGGAATTATTTTCAGCACG 58.046 37.500 13.23 0.00 35.51 5.34
3315 7922 8.184848 GTCTAGGAAAGGAATTATTTTCAGCAC 58.815 37.037 13.23 4.17 35.51 4.40
3316 7923 8.109634 AGTCTAGGAAAGGAATTATTTTCAGCA 58.890 33.333 13.23 1.59 35.51 4.41
3323 7930 9.954992 AGGTACTAGTCTAGGAAAGGAATTATT 57.045 33.333 11.61 0.00 36.02 1.40
3324 7931 9.954992 AAGGTACTAGTCTAGGAAAGGAATTAT 57.045 33.333 11.61 0.00 38.49 1.28
3325 7932 9.779951 AAAGGTACTAGTCTAGGAAAGGAATTA 57.220 33.333 11.61 0.00 38.49 1.40
3326 7933 8.682297 AAAGGTACTAGTCTAGGAAAGGAATT 57.318 34.615 11.61 0.00 38.49 2.17
3327 7934 8.123780 AGAAAGGTACTAGTCTAGGAAAGGAAT 58.876 37.037 11.61 0.00 38.49 3.01
3328 7935 7.477008 AGAAAGGTACTAGTCTAGGAAAGGAA 58.523 38.462 11.61 0.00 38.49 3.36
3329 7936 7.042106 AGAAAGGTACTAGTCTAGGAAAGGA 57.958 40.000 11.61 0.00 38.49 3.36
3330 7937 7.721409 AAGAAAGGTACTAGTCTAGGAAAGG 57.279 40.000 11.61 0.00 38.49 3.11
3332 7939 9.418839 GGATAAGAAAGGTACTAGTCTAGGAAA 57.581 37.037 11.61 0.00 38.49 3.13
3333 7940 8.003629 GGGATAAGAAAGGTACTAGTCTAGGAA 58.996 40.741 11.61 0.00 38.49 3.36
3334 7941 7.422325 GGGGATAAGAAAGGTACTAGTCTAGGA 60.422 44.444 11.61 0.00 38.49 2.94
3335 7942 6.720748 GGGGATAAGAAAGGTACTAGTCTAGG 59.279 46.154 11.61 0.00 38.49 3.02
3336 7943 7.528675 AGGGGATAAGAAAGGTACTAGTCTAG 58.471 42.308 0.00 5.27 38.49 2.43
3337 7944 7.477345 AGGGGATAAGAAAGGTACTAGTCTA 57.523 40.000 0.00 0.00 38.49 2.59
3338 7945 6.358443 AGGGGATAAGAAAGGTACTAGTCT 57.642 41.667 0.00 0.00 38.49 3.24
3339 7946 7.434927 AAAGGGGATAAGAAAGGTACTAGTC 57.565 40.000 0.00 0.00 38.49 2.59
3340 7947 7.825983 AAAAGGGGATAAGAAAGGTACTAGT 57.174 36.000 0.00 0.00 38.49 2.57
3362 7969 1.000618 TCATGCAATGCGCTGGAAAAA 59.999 42.857 9.73 0.00 46.21 1.94
3363 7970 0.602060 TCATGCAATGCGCTGGAAAA 59.398 45.000 9.73 0.00 46.21 2.29
3364 7971 0.171679 CTCATGCAATGCGCTGGAAA 59.828 50.000 9.73 0.00 46.21 3.13
3365 7972 0.677414 TCTCATGCAATGCGCTGGAA 60.677 50.000 9.73 0.00 46.21 3.53
3366 7973 0.677414 TTCTCATGCAATGCGCTGGA 60.677 50.000 9.73 0.00 46.21 3.86
3367 7974 0.384309 ATTCTCATGCAATGCGCTGG 59.616 50.000 9.73 0.00 46.21 4.85
3368 7975 1.599667 GGATTCTCATGCAATGCGCTG 60.600 52.381 9.73 0.00 46.21 5.18
3369 7976 0.666913 GGATTCTCATGCAATGCGCT 59.333 50.000 9.73 0.00 46.21 5.92
3370 7977 0.382873 TGGATTCTCATGCAATGCGC 59.617 50.000 0.00 0.00 46.21 6.09
3371 7978 1.674441 AGTGGATTCTCATGCAATGCG 59.326 47.619 0.00 0.00 46.21 4.73
3372 7979 2.034305 GGAGTGGATTCTCATGCAATGC 59.966 50.000 0.00 0.00 46.21 3.56
3374 7981 2.242965 TGGGAGTGGATTCTCATGCAAT 59.757 45.455 0.00 0.00 36.30 3.56
3377 7984 2.653234 ATGGGAGTGGATTCTCATGC 57.347 50.000 0.00 0.00 36.92 4.06
3379 7986 9.887862 ATAAAAATAATGGGAGTGGATTCTCAT 57.112 29.630 0.00 0.00 39.97 2.90
3385 7992 9.492730 AGAAACATAAAAATAATGGGAGTGGAT 57.507 29.630 0.00 0.00 0.00 3.41
3404 8011 6.753913 TGCCTATATGGAAGAGAGAAACAT 57.246 37.500 0.00 0.00 38.35 2.71
3405 8012 6.560003 TTGCCTATATGGAAGAGAGAAACA 57.440 37.500 0.00 0.00 38.35 2.83
3406 8013 7.554476 ACTTTTGCCTATATGGAAGAGAGAAAC 59.446 37.037 6.77 0.00 38.35 2.78
3407 8014 7.554118 CACTTTTGCCTATATGGAAGAGAGAAA 59.446 37.037 6.77 0.00 38.35 2.52
3409 8016 6.156949 ACACTTTTGCCTATATGGAAGAGAGA 59.843 38.462 6.77 0.00 38.35 3.10
3410 8017 6.352516 ACACTTTTGCCTATATGGAAGAGAG 58.647 40.000 6.77 2.49 38.35 3.20
3411 8018 6.070251 TGACACTTTTGCCTATATGGAAGAGA 60.070 38.462 6.77 0.00 38.35 3.10
3413 8020 6.061022 TGACACTTTTGCCTATATGGAAGA 57.939 37.500 0.00 0.00 38.35 2.87
3415 8022 6.186957 ACATGACACTTTTGCCTATATGGAA 58.813 36.000 0.00 0.00 38.35 3.53
3420 8027 6.040247 CGTCTACATGACACTTTTGCCTATA 58.960 40.000 0.00 0.00 45.60 1.31
3431 8038 6.072397 AGGCTTATATCTCGTCTACATGACAC 60.072 42.308 0.00 0.00 45.60 3.67
3434 8041 8.809468 AATAGGCTTATATCTCGTCTACATGA 57.191 34.615 0.00 0.00 0.00 3.07
3453 8060 8.665685 CAGACGGTCCAAATAAATATAATAGGC 58.334 37.037 4.14 0.00 0.00 3.93
3471 8078 0.521735 GCAAATTGGGACAGACGGTC 59.478 55.000 0.00 0.00 46.20 4.79
3472 8079 0.110486 AGCAAATTGGGACAGACGGT 59.890 50.000 0.00 0.00 42.39 4.83
3473 8080 0.804989 GAGCAAATTGGGACAGACGG 59.195 55.000 0.00 0.00 42.39 4.79
3474 8081 1.813513 AGAGCAAATTGGGACAGACG 58.186 50.000 0.00 0.00 42.39 4.18
3475 8082 4.762251 AGTTTAGAGCAAATTGGGACAGAC 59.238 41.667 0.00 0.00 42.39 3.51
3476 8083 4.985538 AGTTTAGAGCAAATTGGGACAGA 58.014 39.130 0.00 0.00 42.39 3.41
3477 8084 7.396540 AATAGTTTAGAGCAAATTGGGACAG 57.603 36.000 0.00 0.00 42.39 3.51
3478 8085 7.775053 AAATAGTTTAGAGCAAATTGGGACA 57.225 32.000 0.00 0.00 0.00 4.02
3512 8119 7.012704 CGGTTCAAATCAAGAACATATCCTCAT 59.987 37.037 8.15 0.00 45.45 2.90
3516 8123 6.436843 ACGGTTCAAATCAAGAACATATCC 57.563 37.500 8.15 0.00 45.45 2.59
3522 8129 5.229260 GTGACAAACGGTTCAAATCAAGAAC 59.771 40.000 0.00 0.00 43.49 3.01
3539 8305 3.496884 GCGAGTGTTATGAAGGTGACAAA 59.503 43.478 0.00 0.00 0.00 2.83
3551 8335 7.435068 AAACAGTTTTCATAGCGAGTGTTAT 57.565 32.000 0.00 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.