Multiple sequence alignment - TraesCS4B01G203800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G203800 chr4B 100.000 5621 0 0 1 5621 435442558 435436938 0.000000e+00 10381.0
1 TraesCS4B01G203800 chr4B 87.347 490 48 11 261 743 550438230 550438712 2.960000e-152 549.0
2 TraesCS4B01G203800 chr4B 88.166 338 29 8 33 369 550437822 550438149 5.280000e-105 392.0
3 TraesCS4B01G203800 chr4B 84.706 255 23 14 263 506 136292699 136292450 2.020000e-59 241.0
4 TraesCS4B01G203800 chr4B 97.917 48 1 0 84 131 115082943 115082990 3.610000e-12 84.2
5 TraesCS4B01G203800 chr4D 91.714 1943 108 27 837 2741 352124639 352126566 0.000000e+00 2647.0
6 TraesCS4B01G203800 chr4D 90.812 751 45 11 3363 4095 352127043 352127787 0.000000e+00 983.0
7 TraesCS4B01G203800 chr4D 83.234 501 60 15 2797 3294 352126566 352127045 6.690000e-119 438.0
8 TraesCS4B01G203800 chr4D 85.337 341 23 20 4103 4420 352127889 352128225 1.510000e-85 327.0
9 TraesCS4B01G203800 chr4D 83.333 330 38 7 4933 5254 352128645 352128965 7.130000e-74 289.0
10 TraesCS4B01G203800 chr4D 85.463 227 30 1 4490 4716 352128237 352128460 3.390000e-57 233.0
11 TraesCS4B01G203800 chr4D 87.500 80 8 2 5386 5464 352129108 352129186 2.160000e-14 91.6
12 TraesCS4B01G203800 chr4A 90.376 2047 111 46 746 2741 113325602 113323591 0.000000e+00 2610.0
13 TraesCS4B01G203800 chr4A 85.892 1127 101 27 4158 5254 113321548 113320450 0.000000e+00 1147.0
14 TraesCS4B01G203800 chr4A 92.276 738 37 6 3374 4094 113323063 113322329 0.000000e+00 1029.0
15 TraesCS4B01G203800 chr4A 83.422 561 62 21 2797 3352 113323591 113323057 5.060000e-135 492.0
16 TraesCS4B01G203800 chr4A 94.667 75 4 0 5476 5550 113319951 113319877 3.560000e-22 117.0
17 TraesCS4B01G203800 chr4A 92.683 41 2 1 5283 5322 362108404 362108364 2.190000e-04 58.4
18 TraesCS4B01G203800 chr4A 94.595 37 1 1 5284 5320 25025091 25025126 7.870000e-04 56.5
19 TraesCS4B01G203800 chr5B 88.182 440 32 12 307 742 502142221 502141798 1.810000e-139 507.0
20 TraesCS4B01G203800 chr5B 92.089 316 22 2 82 394 502142670 502142355 5.170000e-120 442.0
21 TraesCS4B01G203800 chr5B 100.000 30 0 0 5293 5322 694367499 694367528 7.870000e-04 56.5
22 TraesCS4B01G203800 chr7B 76.099 523 81 26 263 749 695080349 695080863 3.390000e-57 233.0
23 TraesCS4B01G203800 chr7B 80.603 232 25 7 387 598 395757059 395756828 1.620000e-35 161.0
24 TraesCS4B01G203800 chr6D 77.244 479 58 32 305 743 201537260 201537727 3.390000e-57 233.0
25 TraesCS4B01G203800 chrUn 75.577 520 75 24 265 744 40763538 40764045 5.710000e-50 209.0
26 TraesCS4B01G203800 chrUn 75.577 520 75 24 265 744 235859758 235860265 5.710000e-50 209.0
27 TraesCS4B01G203800 chrUn 75.577 520 75 24 265 744 346911888 346911381 5.710000e-50 209.0
28 TraesCS4B01G203800 chr1A 74.953 527 70 29 263 736 389068543 389069060 9.620000e-43 185.0
29 TraesCS4B01G203800 chr1A 80.612 196 31 7 310 501 29807637 29807445 1.630000e-30 145.0
30 TraesCS4B01G203800 chr1B 82.511 223 25 13 292 506 612037719 612037935 3.460000e-42 183.0
31 TraesCS4B01G203800 chr1B 100.000 30 0 0 5293 5322 262066425 262066454 7.870000e-04 56.5
32 TraesCS4B01G203800 chr5D 79.426 209 35 4 538 743 495558137 495557934 2.110000e-29 141.0
33 TraesCS4B01G203800 chr2D 73.320 506 86 38 261 743 621348028 621347549 2.110000e-29 141.0
34 TraesCS4B01G203800 chr2D 78.414 227 35 10 285 501 193149534 193149756 9.820000e-28 135.0
35 TraesCS4B01G203800 chr7A 77.056 231 35 10 386 598 449470185 449469955 3.560000e-22 117.0
36 TraesCS4B01G203800 chr2B 97.368 38 1 0 5285 5322 768661133 768661096 1.310000e-06 65.8
37 TraesCS4B01G203800 chr3B 100.000 30 0 0 5293 5322 671999123 671999094 7.870000e-04 56.5
38 TraesCS4B01G203800 chr1D 100.000 30 0 0 5293 5322 180738128 180738157 7.870000e-04 56.5
39 TraesCS4B01G203800 chr6B 100.000 28 0 0 5292 5319 152083131 152083158 1.000000e-02 52.8
40 TraesCS4B01G203800 chr6A 100.000 28 0 0 5292 5319 96441952 96441979 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G203800 chr4B 435436938 435442558 5620 True 10381.000000 10381 100.000000 1 5621 1 chr4B.!!$R2 5620
1 TraesCS4B01G203800 chr4B 550437822 550438712 890 False 470.500000 549 87.756500 33 743 2 chr4B.!!$F2 710
2 TraesCS4B01G203800 chr4D 352124639 352129186 4547 False 715.514286 2647 86.770429 837 5464 7 chr4D.!!$F1 4627
3 TraesCS4B01G203800 chr4A 113319877 113325602 5725 True 1079.000000 2610 89.326600 746 5550 5 chr4A.!!$R2 4804
4 TraesCS4B01G203800 chr5B 502141798 502142670 872 True 474.500000 507 90.135500 82 742 2 chr5B.!!$R1 660
5 TraesCS4B01G203800 chr7B 695080349 695080863 514 False 233.000000 233 76.099000 263 749 1 chr7B.!!$F1 486
6 TraesCS4B01G203800 chrUn 40763538 40764045 507 False 209.000000 209 75.577000 265 744 1 chrUn.!!$F1 479
7 TraesCS4B01G203800 chrUn 235859758 235860265 507 False 209.000000 209 75.577000 265 744 1 chrUn.!!$F2 479
8 TraesCS4B01G203800 chrUn 346911381 346911888 507 True 209.000000 209 75.577000 265 744 1 chrUn.!!$R1 479

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
819 1127 0.036164 ACAAGCCCGCATAAGTGACA 59.964 50.0 0.0 0.0 0.0 3.58 F
823 1131 0.304705 GCCCGCATAAGTGACAATCG 59.695 55.0 0.0 0.0 0.0 3.34 F
2193 2546 0.251653 TAAGTCTGGAGGAGTGCGGT 60.252 55.0 0.0 0.0 0.0 5.68 F
2987 3364 0.521291 GCGTCATAGGTTTTGCTGCA 59.479 50.0 0.0 0.0 0.0 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1633 1970 0.615544 CCATTGGCACTGTCCCCATT 60.616 55.0 4.05 0.0 0.00 3.16 R
2765 3140 0.670162 GGCTTTCAGAAAGTGCAGCA 59.330 50.0 21.61 0.0 40.64 4.41 R
3322 3713 0.034337 GTTACGTGTCCAAGGCTCCA 59.966 55.0 0.00 0.0 0.00 3.86 R
4677 5930 0.037605 CCCGTGCCGTCTTTCTAGTT 60.038 55.0 0.00 0.0 0.00 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.087253 TGGACCGGCCCATGTAGG 61.087 66.667 4.87 0.00 34.97 3.18
76 77 3.257133 AAAAAGGGGTGGAGCGGA 58.743 55.556 0.00 0.00 0.00 5.54
80 81 2.499303 AAAGGGGTGGAGCGGATTGG 62.499 60.000 0.00 0.00 0.00 3.16
156 157 4.451096 CACGCACAAGGTAGTGATAAGTTT 59.549 41.667 0.00 0.00 42.05 2.66
416 689 6.545504 TTCGAATTCCTGAAGTTTTCTCAG 57.454 37.500 0.00 0.00 0.00 3.35
582 878 0.909623 TAGGGACTTTGGCCTAGTGC 59.090 55.000 17.61 17.61 41.75 4.40
606 903 4.123506 TGTGTTCGATTGTTACTGCTCAA 58.876 39.130 0.00 0.00 0.00 3.02
607 904 4.572795 TGTGTTCGATTGTTACTGCTCAAA 59.427 37.500 0.00 0.00 0.00 2.69
649 947 4.192317 GTCTCCACCTTATTTTCGAGCAT 58.808 43.478 0.00 0.00 0.00 3.79
762 1070 1.898574 GATGGCGGCGGGAATGAAT 60.899 57.895 9.78 0.00 0.00 2.57
767 1075 0.307760 GCGGCGGGAATGAATTACTG 59.692 55.000 9.78 0.00 0.00 2.74
785 1093 3.340727 GCTTGCAAGCCAGCATAAG 57.659 52.632 36.21 5.21 46.20 1.73
786 1094 0.529378 GCTTGCAAGCCAGCATAAGT 59.471 50.000 36.21 0.00 46.20 2.24
787 1095 1.067354 GCTTGCAAGCCAGCATAAGTT 60.067 47.619 36.21 0.00 46.20 2.66
818 1126 0.727398 GACAAGCCCGCATAAGTGAC 59.273 55.000 0.00 0.00 0.00 3.67
819 1127 0.036164 ACAAGCCCGCATAAGTGACA 59.964 50.000 0.00 0.00 0.00 3.58
820 1128 1.164411 CAAGCCCGCATAAGTGACAA 58.836 50.000 0.00 0.00 0.00 3.18
821 1129 1.745087 CAAGCCCGCATAAGTGACAAT 59.255 47.619 0.00 0.00 0.00 2.71
822 1130 1.668419 AGCCCGCATAAGTGACAATC 58.332 50.000 0.00 0.00 0.00 2.67
823 1131 0.304705 GCCCGCATAAGTGACAATCG 59.695 55.000 0.00 0.00 0.00 3.34
824 1132 1.934589 CCCGCATAAGTGACAATCGA 58.065 50.000 0.00 0.00 0.00 3.59
825 1133 2.483876 CCCGCATAAGTGACAATCGAT 58.516 47.619 0.00 0.00 0.00 3.59
826 1134 2.221749 CCCGCATAAGTGACAATCGATG 59.778 50.000 0.00 0.00 0.00 3.84
827 1135 2.348872 CCGCATAAGTGACAATCGATGC 60.349 50.000 0.00 10.94 37.04 3.91
828 1136 2.284952 CGCATAAGTGACAATCGATGCA 59.715 45.455 17.63 0.00 39.68 3.96
829 1137 3.242381 CGCATAAGTGACAATCGATGCAA 60.242 43.478 17.63 0.00 39.68 4.08
830 1138 4.277258 GCATAAGTGACAATCGATGCAAG 58.723 43.478 14.45 0.00 39.53 4.01
873 1181 2.503061 CCCATCTCCTGCAGTCCG 59.497 66.667 13.81 0.00 0.00 4.79
908 1218 0.898320 CCGTCTCTCACATCCAACCT 59.102 55.000 0.00 0.00 0.00 3.50
997 1320 0.552363 AACCCAAAACCCTACCACGT 59.448 50.000 0.00 0.00 0.00 4.49
1092 1423 2.758089 GGTCGACGCGCTCTTCCTA 61.758 63.158 5.73 0.00 0.00 2.94
1227 1564 1.668294 GGGCGAGTCCGATGATGAT 59.332 57.895 0.00 0.00 38.22 2.45
1315 1652 3.723097 ATGCTCTCGCGGGAGGAGA 62.723 63.158 35.37 15.83 40.85 3.71
1633 1970 3.616219 CTTCGGGATTTGATTGTGGGTA 58.384 45.455 0.00 0.00 0.00 3.69
1704 2041 2.356553 GTGGTGCGCAGGAACGTA 60.357 61.111 12.22 0.00 39.81 3.57
1711 2048 2.414138 GTGCGCAGGAACGTAGTAAATT 59.586 45.455 12.22 0.00 45.00 1.82
2073 2415 8.641498 ATTTGTTCATACTTCACATCCTCTTT 57.359 30.769 0.00 0.00 0.00 2.52
2089 2441 7.773690 ACATCCTCTTTGTTTACTTGTTACTGT 59.226 33.333 0.00 0.00 0.00 3.55
2122 2474 7.968405 CCTGTAAGTGCATTGGAACTTTTATAC 59.032 37.037 0.00 0.00 40.10 1.47
2123 2475 8.630054 TGTAAGTGCATTGGAACTTTTATACT 57.370 30.769 0.00 0.00 40.10 2.12
2142 2494 8.652810 TTATACTTTAGGTTAGCGGTGAAATC 57.347 34.615 0.00 0.00 0.00 2.17
2143 2495 4.901868 ACTTTAGGTTAGCGGTGAAATCA 58.098 39.130 0.00 0.00 0.00 2.57
2178 2531 4.777463 CCACCGGGTGATTATTTCTAAGT 58.223 43.478 28.36 0.00 35.23 2.24
2181 2534 5.523916 CACCGGGTGATTATTTCTAAGTCTG 59.476 44.000 22.77 0.00 35.23 3.51
2184 2537 5.986135 CGGGTGATTATTTCTAAGTCTGGAG 59.014 44.000 0.00 0.00 0.00 3.86
2190 2543 3.963428 TTTCTAAGTCTGGAGGAGTGC 57.037 47.619 0.00 0.00 0.00 4.40
2193 2546 0.251653 TAAGTCTGGAGGAGTGCGGT 60.252 55.000 0.00 0.00 0.00 5.68
2195 2548 2.203640 TCTGGAGGAGTGCGGTGT 60.204 61.111 0.00 0.00 0.00 4.16
2206 2559 2.601763 GAGTGCGGTGTACCTTTAATCG 59.398 50.000 0.00 0.00 0.00 3.34
2207 2560 1.662122 GTGCGGTGTACCTTTAATCGG 59.338 52.381 0.00 0.00 0.00 4.18
2215 2568 4.567159 GTGTACCTTTAATCGGCTCTCTTG 59.433 45.833 0.00 0.00 0.00 3.02
2216 2569 4.464951 TGTACCTTTAATCGGCTCTCTTGA 59.535 41.667 0.00 0.00 0.00 3.02
2249 2604 5.222870 TGTATTTATGGGGATTGGGCAAAT 58.777 37.500 0.00 0.00 0.00 2.32
2250 2605 4.710313 ATTTATGGGGATTGGGCAAATG 57.290 40.909 0.00 0.00 0.00 2.32
2275 2630 7.181305 TGGATCAAACATAGGTAGACCACTTAA 59.819 37.037 0.66 0.00 38.89 1.85
2308 2663 5.112686 TGTTTAATTGTTGTCCACTTTGGC 58.887 37.500 0.00 0.00 37.47 4.52
2329 2684 4.545610 GCGTGATTCAAACTGAATTTCCA 58.454 39.130 3.53 0.00 46.20 3.53
2333 2688 6.697019 CGTGATTCAAACTGAATTTCCACTTT 59.303 34.615 13.42 0.00 46.20 2.66
2334 2689 7.222611 CGTGATTCAAACTGAATTTCCACTTTT 59.777 33.333 13.42 0.00 46.20 2.27
2335 2690 8.882736 GTGATTCAAACTGAATTTCCACTTTTT 58.117 29.630 3.53 0.00 46.20 1.94
2399 2754 7.588497 AGATGGGCCAGAATTATTTCTTAAC 57.412 36.000 13.78 0.00 40.28 2.01
2406 2761 5.069119 CCAGAATTATTTCTTAACCCCCTGC 59.931 44.000 0.00 0.00 40.28 4.85
2407 2762 5.893824 CAGAATTATTTCTTAACCCCCTGCT 59.106 40.000 0.00 0.00 40.28 4.24
2408 2763 7.060421 CAGAATTATTTCTTAACCCCCTGCTA 58.940 38.462 0.00 0.00 40.28 3.49
2409 2764 7.725844 CAGAATTATTTCTTAACCCCCTGCTAT 59.274 37.037 0.00 0.00 40.28 2.97
2410 2765 8.289544 AGAATTATTTCTTAACCCCCTGCTATT 58.710 33.333 0.00 0.00 39.18 1.73
2415 2770 6.584471 TTCTTAACCCCCTGCTATTATTCA 57.416 37.500 0.00 0.00 0.00 2.57
2430 2786 9.034800 TGCTATTATTCAACCTTTGGATTTTCT 57.965 29.630 0.00 0.00 29.81 2.52
2483 2839 5.412904 CCCAAGAAAACTCAGTAGGATTGTC 59.587 44.000 0.00 0.00 0.00 3.18
2485 2841 6.712547 CCAAGAAAACTCAGTAGGATTGTCTT 59.287 38.462 0.00 0.00 0.00 3.01
2489 2845 8.624776 AGAAAACTCAGTAGGATTGTCTTTTTG 58.375 33.333 0.00 0.00 0.00 2.44
2502 2859 5.337578 TGTCTTTTTGTTTGCCTAAAGCT 57.662 34.783 0.00 0.00 44.23 3.74
2504 2861 6.868622 TGTCTTTTTGTTTGCCTAAAGCTTA 58.131 32.000 0.00 0.00 44.23 3.09
2540 2903 5.163488 TGGGTTGCATTTCATCATCTCATTC 60.163 40.000 0.00 0.00 0.00 2.67
2552 2915 5.165961 TCATCTCATTCCTCCTTCGTTTT 57.834 39.130 0.00 0.00 0.00 2.43
2557 2932 7.996098 TCTCATTCCTCCTTCGTTTTATTTT 57.004 32.000 0.00 0.00 0.00 1.82
2566 2941 7.655732 CCTCCTTCGTTTTATTTTGATGGTTTT 59.344 33.333 0.00 0.00 0.00 2.43
2614 2989 8.031277 CCCTAAAATCCTCTTGAATGTTCAAAG 58.969 37.037 9.24 9.12 45.61 2.77
2633 3008 9.026074 GTTCAAAGCTCTATAGTAGTGACAATC 57.974 37.037 0.00 0.00 0.00 2.67
2671 3046 7.369803 AGTCTTACTGAATTGTATTGCACTG 57.630 36.000 0.00 0.00 0.00 3.66
2675 3050 4.144297 ACTGAATTGTATTGCACTGGTGT 58.856 39.130 2.64 0.00 0.00 4.16
2680 3055 5.789643 ATTGTATTGCACTGGTGTTTCTT 57.210 34.783 2.64 0.00 0.00 2.52
2694 3069 6.105333 TGGTGTTTCTTGATTTTTGGAGTTG 58.895 36.000 0.00 0.00 0.00 3.16
2701 3076 7.106439 TCTTGATTTTTGGAGTTGCAACTTA 57.894 32.000 31.58 20.97 39.88 2.24
2704 3079 6.634805 TGATTTTTGGAGTTGCAACTTACAA 58.365 32.000 30.56 30.56 39.88 2.41
2726 3101 8.773404 ACAATTGCTACTAGTTAGTGTAAAGG 57.227 34.615 5.05 0.00 37.10 3.11
2735 3110 7.588512 ACTAGTTAGTGTAAAGGTTAGTGACG 58.411 38.462 0.00 0.00 34.72 4.35
2757 3132 7.463961 ACGAAGTCTTAATCTTCTAACCTCA 57.536 36.000 14.35 0.00 29.74 3.86
2758 3133 8.068892 ACGAAGTCTTAATCTTCTAACCTCAT 57.931 34.615 14.35 0.00 29.74 2.90
2759 3134 9.186837 ACGAAGTCTTAATCTTCTAACCTCATA 57.813 33.333 14.35 0.00 29.74 2.15
2760 3135 9.672086 CGAAGTCTTAATCTTCTAACCTCATAG 57.328 37.037 14.35 0.00 39.08 2.23
2761 3136 9.471084 GAAGTCTTAATCTTCTAACCTCATAGC 57.529 37.037 11.08 0.00 38.45 2.97
2762 3137 8.776061 AGTCTTAATCTTCTAACCTCATAGCT 57.224 34.615 0.00 0.00 0.00 3.32
2763 3138 9.207868 AGTCTTAATCTTCTAACCTCATAGCTT 57.792 33.333 0.00 0.00 0.00 3.74
2764 3139 9.825109 GTCTTAATCTTCTAACCTCATAGCTTT 57.175 33.333 0.00 0.00 0.00 3.51
2779 3154 2.497107 GCTTTTGCTGCACTTTCTGA 57.503 45.000 0.00 0.00 43.35 3.27
2780 3155 2.813061 GCTTTTGCTGCACTTTCTGAA 58.187 42.857 0.00 0.00 43.35 3.02
2781 3156 3.189285 GCTTTTGCTGCACTTTCTGAAA 58.811 40.909 0.00 2.44 43.35 2.69
2782 3157 3.244579 GCTTTTGCTGCACTTTCTGAAAG 59.755 43.478 24.58 24.58 42.40 2.62
2783 3158 2.497107 TTGCTGCACTTTCTGAAAGC 57.503 45.000 25.76 16.41 42.27 3.51
2784 3159 0.670162 TGCTGCACTTTCTGAAAGCC 59.330 50.000 25.76 18.32 42.27 4.35
2785 3160 0.957362 GCTGCACTTTCTGAAAGCCT 59.043 50.000 25.76 8.49 42.27 4.58
2786 3161 1.335689 GCTGCACTTTCTGAAAGCCTG 60.336 52.381 25.76 19.16 42.27 4.85
2787 3162 2.224606 CTGCACTTTCTGAAAGCCTGA 58.775 47.619 25.76 9.87 42.27 3.86
2788 3163 2.620115 CTGCACTTTCTGAAAGCCTGAA 59.380 45.455 25.76 13.76 42.27 3.02
2789 3164 2.620115 TGCACTTTCTGAAAGCCTGAAG 59.380 45.455 25.76 12.36 42.27 3.02
2790 3165 2.880890 GCACTTTCTGAAAGCCTGAAGA 59.119 45.455 25.76 0.00 42.27 2.87
2791 3166 3.505293 GCACTTTCTGAAAGCCTGAAGAT 59.495 43.478 25.76 5.15 42.27 2.40
2792 3167 4.697352 GCACTTTCTGAAAGCCTGAAGATA 59.303 41.667 25.76 0.00 42.27 1.98
2793 3168 5.356470 GCACTTTCTGAAAGCCTGAAGATAT 59.644 40.000 25.76 3.83 42.27 1.63
2794 3169 6.458070 GCACTTTCTGAAAGCCTGAAGATATC 60.458 42.308 25.76 0.00 42.27 1.63
2795 3170 6.596888 CACTTTCTGAAAGCCTGAAGATATCA 59.403 38.462 25.76 0.00 42.27 2.15
2806 3181 5.455899 GCCTGAAGATATCACCCTTTCTGAT 60.456 44.000 5.32 0.00 33.47 2.90
2823 3198 3.048600 CTGATCCTTATCTTGTGGGGGA 58.951 50.000 0.00 0.00 32.93 4.81
2828 3203 2.104963 CCTTATCTTGTGGGGGAGCTAC 59.895 54.545 0.00 0.00 0.00 3.58
2914 3290 8.621286 TGTTTGACTTTCTTAAATCCTGAAGAC 58.379 33.333 0.00 0.00 31.47 3.01
2929 3305 3.620488 TGAAGACATATGCACCCTTTCC 58.380 45.455 1.58 0.00 0.00 3.13
2945 3321 3.561725 CCTTTCCGATCCTTATCTTGTGC 59.438 47.826 0.00 0.00 0.00 4.57
2946 3322 3.904800 TTCCGATCCTTATCTTGTGCA 57.095 42.857 0.00 0.00 0.00 4.57
2948 3324 3.531538 TCCGATCCTTATCTTGTGCAAC 58.468 45.455 0.00 0.00 37.35 4.17
2969 3345 9.314321 TGCAACAGTTATACTTAATCTTCTAGC 57.686 33.333 0.00 0.00 0.00 3.42
2970 3346 8.480853 GCAACAGTTATACTTAATCTTCTAGCG 58.519 37.037 0.00 0.00 0.00 4.26
2974 3351 9.900710 CAGTTATACTTAATCTTCTAGCGTCAT 57.099 33.333 0.00 0.00 0.00 3.06
2987 3364 0.521291 GCGTCATAGGTTTTGCTGCA 59.479 50.000 0.00 0.00 0.00 4.41
2991 3368 4.236935 CGTCATAGGTTTTGCTGCATTTT 58.763 39.130 1.84 0.00 0.00 1.82
2993 3370 5.473039 GTCATAGGTTTTGCTGCATTTTCT 58.527 37.500 1.84 2.38 0.00 2.52
2995 3372 3.825143 AGGTTTTGCTGCATTTTCTGT 57.175 38.095 1.84 0.00 0.00 3.41
3003 3380 2.416431 GCTGCATTTTCTGTAAGCCTGG 60.416 50.000 0.00 0.00 33.21 4.45
3025 3414 4.464244 GGAGATATATGACTGCTGGCTGTA 59.536 45.833 5.16 0.00 0.00 2.74
3085 3474 5.717119 ATCTTGTTGGAGGGCTATACTTT 57.283 39.130 0.00 0.00 0.00 2.66
3086 3475 5.514500 TCTTGTTGGAGGGCTATACTTTT 57.486 39.130 0.00 0.00 0.00 2.27
3087 3476 5.887754 TCTTGTTGGAGGGCTATACTTTTT 58.112 37.500 0.00 0.00 0.00 1.94
3112 3501 7.404671 TTTTTGAGAATTTGGAGGGCTATAC 57.595 36.000 0.00 0.00 0.00 1.47
3113 3502 5.975988 TTGAGAATTTGGAGGGCTATACT 57.024 39.130 0.00 0.00 0.00 2.12
3114 3503 5.975988 TGAGAATTTGGAGGGCTATACTT 57.024 39.130 0.00 0.00 0.00 2.24
3261 3652 8.662141 GCTGAAAATCAAATAAACATGCATCTT 58.338 29.630 0.00 0.00 0.00 2.40
3277 3668 8.604035 ACATGCATCTTACTTTTTCATAGTACG 58.396 33.333 0.00 0.00 0.00 3.67
3352 3743 5.427036 TGGACACGTAACCAAATTCTTTC 57.573 39.130 9.90 0.00 32.93 2.62
3353 3744 4.882427 TGGACACGTAACCAAATTCTTTCA 59.118 37.500 9.90 0.00 32.93 2.69
3355 3746 6.039941 TGGACACGTAACCAAATTCTTTCAAT 59.960 34.615 9.90 0.00 32.93 2.57
3356 3747 6.362283 GGACACGTAACCAAATTCTTTCAATG 59.638 38.462 5.49 0.00 0.00 2.82
3357 3748 6.212955 ACACGTAACCAAATTCTTTCAATGG 58.787 36.000 0.00 0.00 37.19 3.16
3358 3749 6.039941 ACACGTAACCAAATTCTTTCAATGGA 59.960 34.615 0.00 0.00 35.16 3.41
3359 3750 7.090173 CACGTAACCAAATTCTTTCAATGGAT 58.910 34.615 0.00 0.00 35.16 3.41
3360 3751 7.598493 CACGTAACCAAATTCTTTCAATGGATT 59.402 33.333 0.00 0.00 35.16 3.01
3361 3752 7.812669 ACGTAACCAAATTCTTTCAATGGATTC 59.187 33.333 0.00 0.00 35.16 2.52
3362 3753 8.028938 CGTAACCAAATTCTTTCAATGGATTCT 58.971 33.333 0.00 0.00 35.16 2.40
3363 3754 9.143631 GTAACCAAATTCTTTCAATGGATTCTG 57.856 33.333 0.00 0.00 35.16 3.02
3364 3755 6.168389 ACCAAATTCTTTCAATGGATTCTGC 58.832 36.000 0.00 0.00 35.16 4.26
3367 3758 7.173562 CCAAATTCTTTCAATGGATTCTGCAAA 59.826 33.333 0.00 0.00 32.82 3.68
3374 3765 7.707624 TTCAATGGATTCTGCAAAACTAGAT 57.292 32.000 0.00 0.00 0.00 1.98
3459 3850 6.763715 ATTTATGGTAGGAGGTGCTGATTA 57.236 37.500 0.00 0.00 0.00 1.75
3625 4016 9.014297 CAAGATTCTCTTAACCATAAACCAAGT 57.986 33.333 0.00 0.00 33.78 3.16
3712 4103 4.380233 CCTTGCATCTTCCAAATCTGTGTC 60.380 45.833 0.00 0.00 0.00 3.67
3763 4154 4.601621 TCGAGTCACTTTCGTCTATGAG 57.398 45.455 0.00 0.00 39.05 2.90
3841 4249 0.240945 GTTAGCCTGCACGCAATGTT 59.759 50.000 10.37 0.00 0.00 2.71
3869 4277 1.828595 TGCGGTGGCTTCAGTCTTATA 59.171 47.619 0.00 0.00 40.82 0.98
3895 4303 1.672356 CTTGTGTAGCTTGGGCGCT 60.672 57.895 7.64 0.00 44.37 5.92
3918 4326 1.659098 GGTTGCACTTTCGACTATCCG 59.341 52.381 0.00 0.00 0.00 4.18
3929 4338 2.418976 TCGACTATCCGTGTGAAGTCAG 59.581 50.000 0.00 0.00 38.60 3.51
3933 4342 4.017126 ACTATCCGTGTGAAGTCAGATGA 58.983 43.478 0.00 0.00 0.00 2.92
3941 4350 3.578282 TGTGAAGTCAGATGAGTTAGCCA 59.422 43.478 2.94 0.00 37.79 4.75
3949 4358 2.959030 AGATGAGTTAGCCATCACGCTA 59.041 45.455 0.00 0.00 42.03 4.26
3954 4363 3.198068 AGTTAGCCATCACGCTATGTTG 58.802 45.455 0.00 0.00 40.92 3.33
3961 4370 4.380531 CCATCACGCTATGTTGTTCCTAT 58.619 43.478 0.00 0.00 0.00 2.57
4021 4431 6.101997 TGTCGTCTCGTAGTTAAGTGAGATA 58.898 40.000 4.22 0.00 39.46 1.98
4028 4438 5.078084 CGTAGTTAAGTGAGATATACGCGG 58.922 45.833 12.47 0.00 0.00 6.46
4032 4442 5.528690 AGTTAAGTGAGATATACGCGGTACA 59.471 40.000 12.47 0.00 0.00 2.90
4082 4492 4.406648 TGATCTGTACTGGCAAGGTATG 57.593 45.455 0.00 0.00 0.00 2.39
4095 4505 5.045213 TGGCAAGGTATGATCTACCTGAAAA 60.045 40.000 18.77 8.01 46.52 2.29
4096 4506 5.885912 GGCAAGGTATGATCTACCTGAAAAA 59.114 40.000 18.77 0.00 46.52 1.94
4097 4507 6.547510 GGCAAGGTATGATCTACCTGAAAAAT 59.452 38.462 18.77 5.44 46.52 1.82
4099 4509 8.131731 GCAAGGTATGATCTACCTGAAAAATTC 58.868 37.037 18.77 1.05 46.52 2.17
4100 4510 9.401058 CAAGGTATGATCTACCTGAAAAATTCT 57.599 33.333 18.77 3.88 46.52 2.40
4101 4511 9.981460 AAGGTATGATCTACCTGAAAAATTCTT 57.019 29.630 18.77 3.35 46.52 2.52
4122 4625 1.152830 TCACCTTGTTTCCCCTGGC 59.847 57.895 0.00 0.00 0.00 4.85
4198 5438 0.179004 CACTGGGTTTACCTGCCACA 60.179 55.000 0.00 0.00 41.59 4.17
4199 5439 0.110486 ACTGGGTTTACCTGCCACAG 59.890 55.000 0.00 0.32 41.59 3.66
4201 5441 1.004745 CTGGGTTTACCTGCCACAGAT 59.995 52.381 0.00 0.00 41.11 2.90
4202 5442 1.271871 TGGGTTTACCTGCCACAGATG 60.272 52.381 0.00 0.00 41.11 2.90
4203 5443 1.004277 GGGTTTACCTGCCACAGATGA 59.996 52.381 0.00 0.00 35.85 2.92
4206 5447 3.378427 GGTTTACCTGCCACAGATGAATC 59.622 47.826 0.00 0.00 32.44 2.52
4219 5460 4.347583 ACAGATGAATCCCTGATTCTCCTC 59.652 45.833 15.58 10.53 45.92 3.71
4247 5488 1.001181 TCAGCCAAATGCAAGCTTTCC 59.999 47.619 0.00 0.00 44.83 3.13
4264 5505 1.808411 TCCAGGCACAAGATTTCGAC 58.192 50.000 0.00 0.00 0.00 4.20
4301 5542 3.267974 GGCTCGTTTGCCCTCTTG 58.732 61.111 5.75 0.00 46.82 3.02
4306 5547 0.884704 TCGTTTGCCCTCTTGTGCTC 60.885 55.000 0.00 0.00 0.00 4.26
4311 5552 0.321919 TGCCCTCTTGTGCTCACATC 60.322 55.000 3.31 0.00 41.52 3.06
4333 5578 7.605691 ACATCTTATGTGCATAGATTAGGCTTC 59.394 37.037 0.00 0.00 43.01 3.86
4397 5642 0.611618 TCAATGTGGGGCATGTGTCC 60.612 55.000 0.00 0.00 37.96 4.02
4422 5667 4.633126 TCATTTAGCACTGCTGAATCACTC 59.367 41.667 16.15 0.00 41.71 3.51
4423 5668 3.683365 TTAGCACTGCTGAATCACTCA 57.317 42.857 14.15 0.00 40.10 3.41
4424 5669 1.805869 AGCACTGCTGAATCACTCAC 58.194 50.000 1.67 0.00 37.57 3.51
4425 5670 1.347050 AGCACTGCTGAATCACTCACT 59.653 47.619 1.67 0.00 37.57 3.41
4426 5671 2.564504 AGCACTGCTGAATCACTCACTA 59.435 45.455 1.67 0.00 37.57 2.74
4427 5672 2.670414 GCACTGCTGAATCACTCACTAC 59.330 50.000 0.00 0.00 0.00 2.73
4428 5673 3.616076 GCACTGCTGAATCACTCACTACT 60.616 47.826 0.00 0.00 0.00 2.57
4448 5701 8.015658 CACTACTCTTTGTTGCTTAATTGGTAC 58.984 37.037 0.00 0.00 0.00 3.34
4449 5702 6.952773 ACTCTTTGTTGCTTAATTGGTACA 57.047 33.333 0.00 0.00 0.00 2.90
4450 5703 6.970484 ACTCTTTGTTGCTTAATTGGTACAG 58.030 36.000 0.00 0.00 42.39 2.74
4451 5704 6.546034 ACTCTTTGTTGCTTAATTGGTACAGT 59.454 34.615 0.00 0.00 42.39 3.55
4452 5705 7.717875 ACTCTTTGTTGCTTAATTGGTACAGTA 59.282 33.333 0.00 0.00 42.39 2.74
4453 5706 8.094798 TCTTTGTTGCTTAATTGGTACAGTAG 57.905 34.615 0.00 0.00 42.39 2.57
4454 5707 7.717875 TCTTTGTTGCTTAATTGGTACAGTAGT 59.282 33.333 0.00 0.00 42.39 2.73
4455 5708 8.905660 TTTGTTGCTTAATTGGTACAGTAGTA 57.094 30.769 0.00 0.00 42.39 1.82
4459 5712 7.649533 TGCTTAATTGGTACAGTAGTAGCTA 57.350 36.000 0.00 0.00 46.30 3.32
4467 5720 6.684686 TGGTACAGTAGTAGCTACAAACAAG 58.315 40.000 25.28 18.70 46.30 3.16
4478 5731 0.940126 ACAAACAAGCGAGACTGCTG 59.060 50.000 0.00 0.00 46.60 4.41
4482 5735 2.431601 AAGCGAGACTGCTGCGAC 60.432 61.111 0.00 0.00 46.60 5.19
4483 5736 3.212906 AAGCGAGACTGCTGCGACA 62.213 57.895 0.00 0.00 46.60 4.35
4485 5738 1.226688 GCGAGACTGCTGCGACATA 60.227 57.895 0.00 0.00 0.00 2.29
4486 5739 0.596083 GCGAGACTGCTGCGACATAT 60.596 55.000 0.00 0.00 0.00 1.78
4487 5740 1.403493 CGAGACTGCTGCGACATATC 58.597 55.000 0.00 0.00 0.00 1.63
4526 5779 5.873712 GCGATGAATTGATCCTCTGTGATAT 59.126 40.000 0.00 0.00 0.00 1.63
4541 5794 2.858344 GTGATATCCACAAACCGAGTCG 59.142 50.000 5.29 5.29 45.03 4.18
4547 5800 2.546368 TCCACAAACCGAGTCGAATTTG 59.454 45.455 27.00 27.00 38.09 2.32
4551 5804 4.024725 CACAAACCGAGTCGAATTTGGTTA 60.025 41.667 29.58 0.00 40.63 2.85
4563 5816 8.244113 AGTCGAATTTGGTTATCCATTCTTTTC 58.756 33.333 0.00 0.00 43.91 2.29
4601 5854 2.170187 AGCTTGGTGAAAACAATTGCCA 59.830 40.909 5.05 0.36 0.00 4.92
4627 5880 0.033781 CTGCTGCAGATAGAGGAGGC 59.966 60.000 24.88 0.00 32.44 4.70
4661 5914 1.073216 GCACAGATGTGGACTCGTCG 61.073 60.000 14.44 0.00 45.72 5.12
4665 5918 1.080093 GATGTGGACTCGTCGGCAA 60.080 57.895 0.00 0.00 0.00 4.52
4677 5930 4.157289 ACTCGTCGGCAAGAACTATTCTAA 59.843 41.667 0.00 0.00 39.61 2.10
4794 6047 0.254747 GGACATGGTCGGAAATCCCA 59.745 55.000 0.00 0.00 32.65 4.37
4848 6104 9.185192 CTGAGTTGAAATAAAGTGGTGAAATTC 57.815 33.333 0.00 0.00 0.00 2.17
4873 6129 1.185315 CCAGTTACCATTTGGGGCAG 58.815 55.000 0.96 0.00 42.91 4.85
4886 6142 2.285773 GGGCAGAAAAGGCTTGGGG 61.286 63.158 0.00 0.00 0.00 4.96
4891 6147 2.437413 CAGAAAAGGCTTGGGGTCTAC 58.563 52.381 0.00 0.00 0.00 2.59
4894 6150 0.992695 AAAGGCTTGGGGTCTACTCC 59.007 55.000 0.00 0.00 0.00 3.85
4898 6154 1.338890 GCTTGGGGTCTACTCCCTCC 61.339 65.000 0.00 0.00 46.27 4.30
4911 6179 2.572104 ACTCCCTCCATAAACGCTCTTT 59.428 45.455 0.00 0.00 0.00 2.52
4916 6184 4.941873 CCCTCCATAAACGCTCTTTTACTT 59.058 41.667 0.00 0.00 0.00 2.24
4917 6185 5.064834 CCCTCCATAAACGCTCTTTTACTTC 59.935 44.000 0.00 0.00 0.00 3.01
4921 6189 8.836268 TCCATAAACGCTCTTTTACTTCTTTA 57.164 30.769 0.00 0.00 0.00 1.85
4943 6234 9.411189 CTTTATTACAGAGGGAGTAGTAGTCTT 57.589 37.037 4.99 0.00 0.00 3.01
4946 6237 5.986501 ACAGAGGGAGTAGTAGTCTTTTG 57.013 43.478 4.99 2.99 0.00 2.44
5005 6297 3.066621 TCAACTTGTTGACTTGGTGCATC 59.933 43.478 11.62 0.00 0.00 3.91
5014 6306 4.009675 TGACTTGGTGCATCCTATTTGTC 58.990 43.478 0.00 0.00 37.07 3.18
5027 6319 7.652727 CATCCTATTTGTCGAGTCTGATCTAA 58.347 38.462 0.00 0.00 0.00 2.10
5030 6322 4.451629 TTTGTCGAGTCTGATCTAACCC 57.548 45.455 0.00 0.00 0.00 4.11
5042 6334 4.595986 TGATCTAACCCTTTTTAGCCACC 58.404 43.478 0.00 0.00 0.00 4.61
5043 6335 3.062122 TCTAACCCTTTTTAGCCACCG 57.938 47.619 0.00 0.00 0.00 4.94
5044 6336 1.471287 CTAACCCTTTTTAGCCACCGC 59.529 52.381 0.00 0.00 0.00 5.68
5045 6337 0.468400 AACCCTTTTTAGCCACCGCA 60.468 50.000 0.00 0.00 37.52 5.69
5046 6338 0.468400 ACCCTTTTTAGCCACCGCAA 60.468 50.000 0.00 0.00 37.52 4.85
5047 6339 0.038618 CCCTTTTTAGCCACCGCAAC 60.039 55.000 0.00 0.00 37.52 4.17
5048 6340 0.038618 CCTTTTTAGCCACCGCAACC 60.039 55.000 0.00 0.00 37.52 3.77
5078 6370 2.108700 CGTTTGCGTTTCTTCCACAAG 58.891 47.619 0.00 0.00 0.00 3.16
5139 6433 1.238439 CGCTGAATTTGGAGTGTGGT 58.762 50.000 0.00 0.00 0.00 4.16
5150 6444 0.523966 GAGTGTGGTCGTGAGAGGAG 59.476 60.000 0.00 0.00 43.49 3.69
5170 6468 1.801395 GCGAGCGCCTGTCTATGTTTA 60.801 52.381 2.29 0.00 34.56 2.01
5212 6510 5.622378 GTTTTCGAACAAAACAAAATGGCA 58.378 33.333 0.00 0.00 39.30 4.92
5214 6512 3.452474 TCGAACAAAACAAAATGGCAGG 58.548 40.909 0.00 0.00 0.00 4.85
5218 6516 2.286872 CAAAACAAAATGGCAGGTGCA 58.713 42.857 4.01 0.00 44.36 4.57
5221 6519 1.636148 ACAAAATGGCAGGTGCAGAT 58.364 45.000 4.01 0.00 44.36 2.90
5222 6520 2.806434 ACAAAATGGCAGGTGCAGATA 58.194 42.857 4.01 0.00 44.36 1.98
5223 6521 2.493278 ACAAAATGGCAGGTGCAGATAC 59.507 45.455 4.01 0.00 44.36 2.24
5224 6522 1.767759 AAATGGCAGGTGCAGATACC 58.232 50.000 4.01 0.00 44.36 2.73
5225 6523 0.625316 AATGGCAGGTGCAGATACCA 59.375 50.000 4.01 1.31 43.37 3.25
5226 6524 0.107017 ATGGCAGGTGCAGATACCAC 60.107 55.000 4.01 0.00 43.37 4.16
5227 6525 1.299648 GGCAGGTGCAGATACCACA 59.700 57.895 4.01 0.00 43.37 4.17
5228 6526 0.107017 GGCAGGTGCAGATACCACAT 60.107 55.000 4.01 0.00 43.37 3.21
5231 6536 3.278574 GCAGGTGCAGATACCACATTTA 58.721 45.455 0.00 0.00 43.37 1.40
5236 6541 4.201783 GGTGCAGATACCACATTTACGTTC 60.202 45.833 0.00 0.00 40.54 3.95
5254 6559 1.176527 TCCTGGCTAACAAATGCAGC 58.823 50.000 0.00 0.00 34.48 5.25
5255 6560 0.889994 CCTGGCTAACAAATGCAGCA 59.110 50.000 0.00 0.00 37.02 4.41
5256 6561 1.479323 CCTGGCTAACAAATGCAGCAT 59.521 47.619 0.52 0.52 37.02 3.79
5270 6753 7.223971 ACAAATGCAGCATTATCATTCATGAAC 59.776 33.333 21.15 0.00 35.18 3.18
5271 6754 4.851010 TGCAGCATTATCATTCATGAACG 58.149 39.130 11.07 1.83 40.69 3.95
5273 6756 5.526846 TGCAGCATTATCATTCATGAACGTA 59.473 36.000 11.07 1.34 40.69 3.57
5274 6757 6.205270 TGCAGCATTATCATTCATGAACGTAT 59.795 34.615 11.07 7.21 40.69 3.06
5275 6758 6.740002 GCAGCATTATCATTCATGAACGTATC 59.260 38.462 11.07 0.00 40.69 2.24
5276 6759 7.360691 GCAGCATTATCATTCATGAACGTATCT 60.361 37.037 11.07 0.00 40.69 1.98
5278 6761 8.501580 AGCATTATCATTCATGAACGTATCTTG 58.498 33.333 11.07 3.39 40.69 3.02
5279 6762 8.498358 GCATTATCATTCATGAACGTATCTTGA 58.502 33.333 11.07 9.12 40.69 3.02
5280 6763 9.803130 CATTATCATTCATGAACGTATCTTGAC 57.197 33.333 11.07 0.00 40.71 3.18
5281 6764 6.516478 ATCATTCATGAACGTATCTTGACG 57.484 37.500 11.07 0.00 40.71 4.35
5282 6765 4.267690 TCATTCATGAACGTATCTTGACGC 59.732 41.667 11.07 0.00 46.87 5.19
5283 6766 3.224884 TCATGAACGTATCTTGACGCA 57.775 42.857 0.00 0.00 46.87 5.24
5286 6769 5.344884 TCATGAACGTATCTTGACGCATTA 58.655 37.500 0.00 0.00 46.87 1.90
5287 6770 5.983118 TCATGAACGTATCTTGACGCATTAT 59.017 36.000 0.00 0.00 46.87 1.28
5288 6771 6.478673 TCATGAACGTATCTTGACGCATTATT 59.521 34.615 0.00 0.00 46.87 1.40
5289 6772 7.650104 TCATGAACGTATCTTGACGCATTATTA 59.350 33.333 0.00 0.00 46.87 0.98
5290 6773 7.157050 TGAACGTATCTTGACGCATTATTAC 57.843 36.000 0.00 0.00 46.87 1.89
5291 6774 6.199531 TGAACGTATCTTGACGCATTATTACC 59.800 38.462 0.00 0.00 46.87 2.85
5293 6776 6.973843 ACGTATCTTGACGCATTATTACCTA 58.026 36.000 0.00 0.00 46.87 3.08
5294 6777 6.860023 ACGTATCTTGACGCATTATTACCTAC 59.140 38.462 0.00 0.00 46.87 3.18
5295 6778 7.082602 CGTATCTTGACGCATTATTACCTACT 58.917 38.462 0.00 0.00 35.79 2.57
5296 6779 7.270793 CGTATCTTGACGCATTATTACCTACTC 59.729 40.741 0.00 0.00 35.79 2.59
5297 6780 5.839621 TCTTGACGCATTATTACCTACTCC 58.160 41.667 0.00 0.00 0.00 3.85
5298 6781 4.595762 TGACGCATTATTACCTACTCCC 57.404 45.455 0.00 0.00 0.00 4.30
5299 6782 4.220724 TGACGCATTATTACCTACTCCCT 58.779 43.478 0.00 0.00 0.00 4.20
5300 6783 4.280174 TGACGCATTATTACCTACTCCCTC 59.720 45.833 0.00 0.00 0.00 4.30
5302 6785 3.367087 CGCATTATTACCTACTCCCTCCG 60.367 52.174 0.00 0.00 0.00 4.63
5303 6786 3.577415 GCATTATTACCTACTCCCTCCGT 59.423 47.826 0.00 0.00 0.00 4.69
5304 6787 4.321824 GCATTATTACCTACTCCCTCCGTC 60.322 50.000 0.00 0.00 0.00 4.79
5305 6788 2.378378 ATTACCTACTCCCTCCGTCC 57.622 55.000 0.00 0.00 0.00 4.79
5307 6790 0.920763 TACCTACTCCCTCCGTCCCA 60.921 60.000 0.00 0.00 0.00 4.37
5311 6794 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
5312 6795 0.328258 ACTCCCTCCGTCCCAAAATG 59.672 55.000 0.00 0.00 0.00 2.32
5313 6796 0.618458 CTCCCTCCGTCCCAAAATGA 59.382 55.000 0.00 0.00 0.00 2.57
5314 6797 0.618458 TCCCTCCGTCCCAAAATGAG 59.382 55.000 0.00 0.00 0.00 2.90
5315 6798 0.328258 CCCTCCGTCCCAAAATGAGT 59.672 55.000 0.00 0.00 0.00 3.41
5316 6799 1.453155 CCTCCGTCCCAAAATGAGTG 58.547 55.000 0.00 0.00 0.00 3.51
5317 6800 1.271379 CCTCCGTCCCAAAATGAGTGT 60.271 52.381 0.00 0.00 0.00 3.55
5318 6801 2.076863 CTCCGTCCCAAAATGAGTGTC 58.923 52.381 0.00 0.00 0.00 3.67
5319 6802 1.697432 TCCGTCCCAAAATGAGTGTCT 59.303 47.619 0.00 0.00 0.00 3.41
5320 6803 2.076863 CCGTCCCAAAATGAGTGTCTC 58.923 52.381 0.00 0.00 0.00 3.36
5321 6804 2.549992 CCGTCCCAAAATGAGTGTCTCA 60.550 50.000 1.92 1.92 44.99 3.27
5322 6805 2.738846 CGTCCCAAAATGAGTGTCTCAG 59.261 50.000 5.71 0.00 44.08 3.35
5324 6807 2.040278 TCCCAAAATGAGTGTCTCAGGG 59.960 50.000 12.63 12.63 44.08 4.45
5325 6808 2.040278 CCCAAAATGAGTGTCTCAGGGA 59.960 50.000 13.24 0.00 44.08 4.20
5326 6809 3.077359 CCAAAATGAGTGTCTCAGGGAC 58.923 50.000 0.00 0.00 44.08 4.46
5327 6810 2.738846 CAAAATGAGTGTCTCAGGGACG 59.261 50.000 5.71 0.00 44.08 4.79
5328 6811 0.898320 AATGAGTGTCTCAGGGACGG 59.102 55.000 5.71 0.00 44.08 4.79
5335 6818 2.283966 CTCAGGGACGGAGGGTGT 60.284 66.667 0.00 0.00 46.65 4.16
5336 6819 2.603473 TCAGGGACGGAGGGTGTG 60.603 66.667 0.00 0.00 0.00 3.82
5337 6820 3.706373 CAGGGACGGAGGGTGTGG 61.706 72.222 0.00 0.00 0.00 4.17
5338 6821 3.923645 AGGGACGGAGGGTGTGGA 61.924 66.667 0.00 0.00 0.00 4.02
5339 6822 3.391382 GGGACGGAGGGTGTGGAG 61.391 72.222 0.00 0.00 0.00 3.86
5341 6824 1.304713 GGACGGAGGGTGTGGAGTA 60.305 63.158 0.00 0.00 0.00 2.59
5342 6825 1.321074 GGACGGAGGGTGTGGAGTAG 61.321 65.000 0.00 0.00 0.00 2.57
5343 6826 0.611340 GACGGAGGGTGTGGAGTAGT 60.611 60.000 0.00 0.00 0.00 2.73
5344 6827 0.700564 ACGGAGGGTGTGGAGTAGTA 59.299 55.000 0.00 0.00 0.00 1.82
5345 6828 1.287146 ACGGAGGGTGTGGAGTAGTAT 59.713 52.381 0.00 0.00 0.00 2.12
5360 6843 2.660670 AGTATACTAGCTGCCGGAGT 57.339 50.000 5.05 0.68 0.00 3.85
5361 6844 3.784511 AGTATACTAGCTGCCGGAGTA 57.215 47.619 5.05 3.57 0.00 2.59
5362 6845 4.304048 AGTATACTAGCTGCCGGAGTAT 57.696 45.455 5.05 11.86 39.25 2.12
5363 6846 4.664392 AGTATACTAGCTGCCGGAGTATT 58.336 43.478 15.61 0.00 37.52 1.89
5364 6847 5.813383 AGTATACTAGCTGCCGGAGTATTA 58.187 41.667 15.61 3.05 37.52 0.98
5365 6848 6.424883 AGTATACTAGCTGCCGGAGTATTAT 58.575 40.000 15.61 5.10 37.52 1.28
5395 6950 1.725557 TACTGCGAGGCGAGGTGATC 61.726 60.000 0.00 0.00 0.00 2.92
5441 6996 2.573869 CTTCGAGGCTCCGCTGAA 59.426 61.111 9.32 5.70 0.00 3.02
5459 7014 2.293122 TGAATCCAGCCGTTGAAACTTG 59.707 45.455 0.00 0.00 0.00 3.16
5467 7022 2.450160 CCGTTGAAACTTGACAAGCAC 58.550 47.619 15.24 7.39 0.00 4.40
5471 7026 2.733956 TGAAACTTGACAAGCACCCTT 58.266 42.857 15.24 0.00 0.00 3.95
5472 7027 2.687935 TGAAACTTGACAAGCACCCTTC 59.312 45.455 15.24 10.30 0.00 3.46
5473 7028 1.692411 AACTTGACAAGCACCCTTCC 58.308 50.000 15.24 0.00 0.00 3.46
5484 7069 1.301479 ACCCTTCCTTTGTCGCGAC 60.301 57.895 31.66 31.66 0.00 5.19
5487 7072 1.344942 CCTTCCTTTGTCGCGACGAG 61.345 60.000 31.88 28.76 36.23 4.18
5517 7102 2.726912 CTGCTGTTTTGGCGCACG 60.727 61.111 10.83 0.00 0.00 5.34
5540 7125 2.230750 TGAGCTGTGATGTCTGTCTCAG 59.769 50.000 0.00 0.00 40.74 3.35
5550 7135 3.206150 TGTCTGTCTCAGGAAAACAAGC 58.794 45.455 0.00 0.00 31.51 4.01
5551 7136 3.206150 GTCTGTCTCAGGAAAACAAGCA 58.794 45.455 0.00 0.00 31.51 3.91
5552 7137 3.249559 GTCTGTCTCAGGAAAACAAGCAG 59.750 47.826 0.00 0.00 31.51 4.24
5553 7138 1.949525 TGTCTCAGGAAAACAAGCAGC 59.050 47.619 0.00 0.00 0.00 5.25
5554 7139 1.949525 GTCTCAGGAAAACAAGCAGCA 59.050 47.619 0.00 0.00 0.00 4.41
5555 7140 2.031333 GTCTCAGGAAAACAAGCAGCAG 60.031 50.000 0.00 0.00 0.00 4.24
5556 7141 2.158769 TCTCAGGAAAACAAGCAGCAGA 60.159 45.455 0.00 0.00 0.00 4.26
5557 7142 2.818432 CTCAGGAAAACAAGCAGCAGAT 59.182 45.455 0.00 0.00 0.00 2.90
5558 7143 3.225104 TCAGGAAAACAAGCAGCAGATT 58.775 40.909 0.00 0.00 0.00 2.40
5559 7144 3.254166 TCAGGAAAACAAGCAGCAGATTC 59.746 43.478 0.00 0.00 0.00 2.52
5560 7145 3.255149 CAGGAAAACAAGCAGCAGATTCT 59.745 43.478 0.00 0.00 0.00 2.40
5561 7146 3.505293 AGGAAAACAAGCAGCAGATTCTC 59.495 43.478 0.00 0.00 0.00 2.87
5562 7147 3.254166 GGAAAACAAGCAGCAGATTCTCA 59.746 43.478 0.00 0.00 0.00 3.27
5563 7148 4.261741 GGAAAACAAGCAGCAGATTCTCAA 60.262 41.667 0.00 0.00 0.00 3.02
5564 7149 4.924305 AAACAAGCAGCAGATTCTCAAA 57.076 36.364 0.00 0.00 0.00 2.69
5565 7150 4.924305 AACAAGCAGCAGATTCTCAAAA 57.076 36.364 0.00 0.00 0.00 2.44
5566 7151 4.924305 ACAAGCAGCAGATTCTCAAAAA 57.076 36.364 0.00 0.00 0.00 1.94
5591 7176 5.675684 AAAAGAAGGAAGGAAAACAAGCA 57.324 34.783 0.00 0.00 0.00 3.91
5592 7177 4.926140 AAGAAGGAAGGAAAACAAGCAG 57.074 40.909 0.00 0.00 0.00 4.24
5593 7178 2.625314 AGAAGGAAGGAAAACAAGCAGC 59.375 45.455 0.00 0.00 0.00 5.25
5594 7179 2.371658 AGGAAGGAAAACAAGCAGCT 57.628 45.000 0.00 0.00 0.00 4.24
5595 7180 2.234143 AGGAAGGAAAACAAGCAGCTC 58.766 47.619 0.00 0.00 0.00 4.09
5596 7181 1.956477 GGAAGGAAAACAAGCAGCTCA 59.044 47.619 0.00 0.00 0.00 4.26
5597 7182 2.030451 GGAAGGAAAACAAGCAGCTCAG 60.030 50.000 0.00 0.00 0.00 3.35
5598 7183 0.957362 AGGAAAACAAGCAGCTCAGC 59.043 50.000 0.00 0.00 0.00 4.26
5600 7185 1.068679 GGAAAACAAGCAGCTCAGCTC 60.069 52.381 0.00 0.00 45.89 4.09
5601 7186 1.605710 GAAAACAAGCAGCTCAGCTCA 59.394 47.619 0.00 0.00 45.89 4.26
5602 7187 1.683943 AAACAAGCAGCTCAGCTCAA 58.316 45.000 0.00 0.00 45.89 3.02
5603 7188 1.683943 AACAAGCAGCTCAGCTCAAA 58.316 45.000 0.00 0.00 45.89 2.69
5604 7189 0.950116 ACAAGCAGCTCAGCTCAAAC 59.050 50.000 0.00 0.00 45.89 2.93
5605 7190 0.949397 CAAGCAGCTCAGCTCAAACA 59.051 50.000 0.00 0.00 45.89 2.83
5606 7191 1.069159 CAAGCAGCTCAGCTCAAACAG 60.069 52.381 0.00 0.00 45.89 3.16
5607 7192 0.395686 AGCAGCTCAGCTCAAACAGA 59.604 50.000 0.00 0.00 42.18 3.41
5608 7193 1.202734 AGCAGCTCAGCTCAAACAGAA 60.203 47.619 0.00 0.00 42.18 3.02
5609 7194 1.605710 GCAGCTCAGCTCAAACAGAAA 59.394 47.619 0.00 0.00 36.40 2.52
5610 7195 2.604132 GCAGCTCAGCTCAAACAGAAAC 60.604 50.000 0.00 0.00 36.40 2.78
5611 7196 1.869767 AGCTCAGCTCAAACAGAAACG 59.130 47.619 0.00 0.00 30.62 3.60
5612 7197 1.661460 GCTCAGCTCAAACAGAAACGC 60.661 52.381 0.00 0.00 0.00 4.84
5613 7198 0.581529 TCAGCTCAAACAGAAACGCG 59.418 50.000 3.53 3.53 0.00 6.01
5614 7199 0.581529 CAGCTCAAACAGAAACGCGA 59.418 50.000 15.93 0.00 0.00 5.87
5615 7200 0.582005 AGCTCAAACAGAAACGCGAC 59.418 50.000 15.93 3.56 0.00 5.19
5616 7201 0.718220 GCTCAAACAGAAACGCGACG 60.718 55.000 15.93 0.00 0.00 5.12
5617 7202 0.718220 CTCAAACAGAAACGCGACGC 60.718 55.000 15.93 10.49 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.087253 CCTACATGGGCCGGTCCA 61.087 66.667 33.79 33.79 41.60 4.02
17 18 0.826256 AAGGAAAACTTCGGGCACCC 60.826 55.000 0.00 0.00 37.42 4.61
18 19 0.596577 GAAGGAAAACTTCGGGCACC 59.403 55.000 0.00 0.00 45.51 5.01
31 32 9.661563 TGCGTTCTAAAAATATAGAAGAAGGAA 57.338 29.630 7.13 0.00 41.33 3.36
63 64 3.411517 CCAATCCGCTCCACCCCT 61.412 66.667 0.00 0.00 0.00 4.79
64 65 4.506255 CCCAATCCGCTCCACCCC 62.506 72.222 0.00 0.00 0.00 4.95
65 66 3.407967 TCCCAATCCGCTCCACCC 61.408 66.667 0.00 0.00 0.00 4.61
66 67 2.124695 GTCCCAATCCGCTCCACC 60.125 66.667 0.00 0.00 0.00 4.61
67 68 1.153349 GAGTCCCAATCCGCTCCAC 60.153 63.158 0.00 0.00 0.00 4.02
76 77 0.546747 TCCCAGGTTCGAGTCCCAAT 60.547 55.000 5.32 0.00 0.00 3.16
80 81 1.605971 GAGGTCCCAGGTTCGAGTCC 61.606 65.000 1.17 1.17 0.00 3.85
102 103 3.437795 AGAAGCATGCAGTGGCGC 61.438 61.111 21.98 0.00 45.35 6.53
156 157 9.945904 GAGAGAATAAAAGAGAGGAAAGGTTAA 57.054 33.333 0.00 0.00 0.00 2.01
396 669 7.135467 GTGAACTGAGAAAACTTCAGGAATTC 58.865 38.462 7.13 0.00 44.96 2.17
402 675 5.470845 AACGTGAACTGAGAAAACTTCAG 57.529 39.130 0.00 0.98 45.89 3.02
433 708 8.798402 TCATAAAATTGGAAAGGTTCGTACAAT 58.202 29.630 0.00 0.00 0.00 2.71
582 878 3.067106 AGCAGTAACAATCGAACACAGG 58.933 45.455 0.00 0.00 0.00 4.00
606 903 2.697751 CAGGATTCGATCTCTGACCCTT 59.302 50.000 4.11 0.00 32.66 3.95
607 904 2.315176 CAGGATTCGATCTCTGACCCT 58.685 52.381 4.11 0.00 32.66 4.34
743 1051 2.623094 ATTCATTCCCGCCGCCATCA 62.623 55.000 0.00 0.00 0.00 3.07
744 1052 1.455383 AATTCATTCCCGCCGCCATC 61.455 55.000 0.00 0.00 0.00 3.51
769 1077 3.749665 AAAACTTATGCTGGCTTGCAA 57.250 38.095 9.48 0.00 46.61 4.08
800 1108 0.036164 TGTCACTTATGCGGGCTTGT 59.964 50.000 0.00 0.00 0.00 3.16
801 1109 1.164411 TTGTCACTTATGCGGGCTTG 58.836 50.000 0.00 0.00 0.00 4.01
802 1110 2.017049 GATTGTCACTTATGCGGGCTT 58.983 47.619 0.00 0.00 0.00 4.35
818 1126 4.795278 GCCTTACTTTTCTTGCATCGATTG 59.205 41.667 0.00 0.00 0.00 2.67
819 1127 4.142381 GGCCTTACTTTTCTTGCATCGATT 60.142 41.667 0.00 0.00 0.00 3.34
820 1128 3.378427 GGCCTTACTTTTCTTGCATCGAT 59.622 43.478 0.00 0.00 0.00 3.59
821 1129 2.747446 GGCCTTACTTTTCTTGCATCGA 59.253 45.455 0.00 0.00 0.00 3.59
822 1130 2.159379 GGGCCTTACTTTTCTTGCATCG 60.159 50.000 0.84 0.00 0.00 3.84
823 1131 2.825532 TGGGCCTTACTTTTCTTGCATC 59.174 45.455 4.53 0.00 0.00 3.91
824 1132 2.888212 TGGGCCTTACTTTTCTTGCAT 58.112 42.857 4.53 0.00 0.00 3.96
825 1133 2.364002 GTTGGGCCTTACTTTTCTTGCA 59.636 45.455 4.53 0.00 0.00 4.08
826 1134 2.288825 GGTTGGGCCTTACTTTTCTTGC 60.289 50.000 4.53 0.00 0.00 4.01
827 1135 3.660501 GGTTGGGCCTTACTTTTCTTG 57.339 47.619 4.53 0.00 0.00 3.02
873 1181 5.919755 AGAGACGGGGAGATATTTTTCTTC 58.080 41.667 0.00 0.00 0.00 2.87
908 1218 3.283751 GAAGGGAACGATCAGAGAGAGA 58.716 50.000 0.00 0.00 0.00 3.10
1092 1423 1.078848 GCGGCTCATCAGGTTCTGT 60.079 57.895 0.00 0.00 32.61 3.41
1221 1558 2.159240 CCCTTCTTCGTCGTCATCATCA 60.159 50.000 0.00 0.00 0.00 3.07
1227 1564 1.248785 CCTCCCCTTCTTCGTCGTCA 61.249 60.000 0.00 0.00 0.00 4.35
1315 1652 1.836802 GATCTCCTTCTCCAGCTTGGT 59.163 52.381 0.00 0.00 39.03 3.67
1555 1892 4.673375 CTGCTTGGCCCTGGCAGT 62.673 66.667 24.41 0.00 45.59 4.40
1633 1970 0.615544 CCATTGGCACTGTCCCCATT 60.616 55.000 4.05 0.00 0.00 3.16
1704 2041 1.957113 GCTGCTGCAGGGGAATTTACT 60.957 52.381 29.05 0.00 39.41 2.24
1932 2270 8.279970 AGAAACAGCACATATTTGCACTATTA 57.720 30.769 15.86 0.00 45.62 0.98
1937 2275 5.221880 TCAAGAAACAGCACATATTTGCAC 58.778 37.500 15.86 2.67 45.62 4.57
1978 2316 4.170053 TCCTGGTAGGTTCATATGAGGAGA 59.830 45.833 5.39 0.00 36.53 3.71
1985 2323 7.944554 CCAATTTGTATCCTGGTAGGTTCATAT 59.055 37.037 0.00 0.00 36.53 1.78
2073 2415 5.336744 GCTTGCAACAGTAACAAGTAAACA 58.663 37.500 14.10 0.00 42.20 2.83
2089 2441 3.108292 TGCACTTACAGGCTTGCAA 57.892 47.368 8.28 0.00 41.90 4.08
2122 2474 6.761714 ACTATGATTTCACCGCTAACCTAAAG 59.238 38.462 0.00 0.00 0.00 1.85
2123 2475 6.537301 CACTATGATTTCACCGCTAACCTAAA 59.463 38.462 0.00 0.00 0.00 1.85
2127 2479 3.560068 CCACTATGATTTCACCGCTAACC 59.440 47.826 0.00 0.00 0.00 2.85
2171 2523 1.819288 CGCACTCCTCCAGACTTAGAA 59.181 52.381 0.00 0.00 0.00 2.10
2178 2531 1.076014 TACACCGCACTCCTCCAGA 59.924 57.895 0.00 0.00 0.00 3.86
2181 2534 1.542187 AAGGTACACCGCACTCCTCC 61.542 60.000 0.00 0.00 42.08 4.30
2184 2537 2.460757 TTAAAGGTACACCGCACTCC 57.539 50.000 0.00 0.00 42.08 3.85
2190 2543 2.159142 AGAGCCGATTAAAGGTACACCG 60.159 50.000 0.00 0.00 42.08 4.94
2193 2546 4.464951 TCAAGAGAGCCGATTAAAGGTACA 59.535 41.667 0.00 0.00 0.00 2.90
2195 2548 5.395324 CCTTCAAGAGAGCCGATTAAAGGTA 60.395 44.000 0.00 0.00 0.00 3.08
2206 2559 8.910351 AATACATTATTACCTTCAAGAGAGCC 57.090 34.615 0.00 0.00 0.00 4.70
2240 2595 4.161942 CCTATGTTTGATCCATTTGCCCAA 59.838 41.667 0.00 0.00 0.00 4.12
2241 2596 3.705579 CCTATGTTTGATCCATTTGCCCA 59.294 43.478 0.00 0.00 0.00 5.36
2249 2604 5.030147 AGTGGTCTACCTATGTTTGATCCA 58.970 41.667 0.02 0.00 36.82 3.41
2250 2605 5.615925 AGTGGTCTACCTATGTTTGATCC 57.384 43.478 0.02 0.00 36.82 3.36
2275 2630 6.405397 GGACAACAATTAAACAGTGGTTCACT 60.405 38.462 0.00 0.00 46.51 3.41
2281 2636 5.514274 AGTGGACAACAATTAAACAGTGG 57.486 39.130 0.00 0.00 0.00 4.00
2291 2646 1.066908 CACGCCAAAGTGGACAACAAT 59.933 47.619 0.00 0.00 40.96 2.71
2308 2663 5.762045 AGTGGAAATTCAGTTTGAATCACG 58.238 37.500 4.90 0.00 45.57 4.35
2329 2684 8.918202 TTGTATCAGAATAGGTCACAAAAAGT 57.082 30.769 0.00 0.00 0.00 2.66
2333 2688 7.458397 AGGTTTGTATCAGAATAGGTCACAAA 58.542 34.615 0.00 0.00 33.40 2.83
2334 2689 7.016153 AGGTTTGTATCAGAATAGGTCACAA 57.984 36.000 0.00 0.00 0.00 3.33
2335 2690 6.620877 AGGTTTGTATCAGAATAGGTCACA 57.379 37.500 0.00 0.00 0.00 3.58
2399 2754 3.884037 AGGTTGAATAATAGCAGGGGG 57.116 47.619 0.00 0.00 0.00 5.40
2408 2763 9.093458 AGTCAGAAAATCCAAAGGTTGAATAAT 57.907 29.630 0.00 0.00 0.00 1.28
2409 2764 8.477419 AGTCAGAAAATCCAAAGGTTGAATAA 57.523 30.769 0.00 0.00 0.00 1.40
2410 2765 9.753674 ATAGTCAGAAAATCCAAAGGTTGAATA 57.246 29.630 0.00 0.00 0.00 1.75
2415 2770 8.934023 TTACATAGTCAGAAAATCCAAAGGTT 57.066 30.769 0.00 0.00 0.00 3.50
2430 2786 8.073467 TGATCACCAGTACAATTACATAGTCA 57.927 34.615 0.00 0.00 0.00 3.41
2489 2845 9.599866 AATCCAATATTTAAGCTTTAGGCAAAC 57.400 29.630 3.20 0.00 44.79 2.93
2502 2859 9.171877 GAAATGCAACCCAAATCCAATATTTAA 57.828 29.630 0.00 0.00 0.00 1.52
2504 2861 7.173722 TGAAATGCAACCCAAATCCAATATTT 58.826 30.769 0.00 0.00 0.00 1.40
2509 2866 4.041321 TGATGAAATGCAACCCAAATCCAA 59.959 37.500 0.00 0.00 0.00 3.53
2540 2903 6.267496 ACCATCAAAATAAAACGAAGGAGG 57.733 37.500 0.00 0.00 0.00 4.30
2552 2915 5.247110 TGCAGCCCTAAAAACCATCAAAATA 59.753 36.000 0.00 0.00 0.00 1.40
2557 2932 2.300956 TGCAGCCCTAAAAACCATCA 57.699 45.000 0.00 0.00 0.00 3.07
2566 2941 1.617850 CAACCAACAATGCAGCCCTAA 59.382 47.619 0.00 0.00 0.00 2.69
2570 2945 1.668793 GCCAACCAACAATGCAGCC 60.669 57.895 0.00 0.00 0.00 4.85
2647 3022 6.372659 CCAGTGCAATACAATTCAGTAAGACT 59.627 38.462 0.00 0.00 0.00 3.24
2664 3039 4.734398 AAATCAAGAAACACCAGTGCAA 57.266 36.364 0.00 0.00 0.00 4.08
2671 3046 5.006649 GCAACTCCAAAAATCAAGAAACACC 59.993 40.000 0.00 0.00 0.00 4.16
2675 3050 6.405538 AGTTGCAACTCCAAAAATCAAGAAA 58.594 32.000 26.36 0.00 32.86 2.52
2680 3055 6.214191 TGTAAGTTGCAACTCCAAAAATCA 57.786 33.333 31.20 17.15 38.57 2.57
2694 3069 8.169268 CACTAACTAGTAGCAATTGTAAGTTGC 58.831 37.037 7.40 2.82 42.23 4.17
2701 3076 8.373220 ACCTTTACACTAACTAGTAGCAATTGT 58.627 33.333 7.40 0.00 34.13 2.71
2713 3088 6.639632 TCGTCACTAACCTTTACACTAACT 57.360 37.500 0.00 0.00 0.00 2.24
2715 3090 7.013655 AGACTTCGTCACTAACCTTTACACTAA 59.986 37.037 0.00 0.00 34.60 2.24
2724 3099 6.837471 AGATTAAGACTTCGTCACTAACCT 57.163 37.500 0.00 0.00 34.60 3.50
2726 3101 9.837525 TTAGAAGATTAAGACTTCGTCACTAAC 57.162 33.333 14.95 0.00 45.51 2.34
2735 3110 9.471084 GCTATGAGGTTAGAAGATTAAGACTTC 57.529 37.037 13.77 13.77 42.53 3.01
2741 3116 8.893727 GCAAAAGCTATGAGGTTAGAAGATTAA 58.106 33.333 3.72 0.00 34.42 1.40
2742 3117 8.267894 AGCAAAAGCTATGAGGTTAGAAGATTA 58.732 33.333 3.72 0.00 34.42 1.75
2743 3118 7.066766 CAGCAAAAGCTATGAGGTTAGAAGATT 59.933 37.037 3.72 0.00 34.42 2.40
2744 3119 6.541641 CAGCAAAAGCTATGAGGTTAGAAGAT 59.458 38.462 3.72 0.00 34.42 2.40
2745 3120 5.877012 CAGCAAAAGCTATGAGGTTAGAAGA 59.123 40.000 3.72 0.00 34.42 2.87
2746 3121 5.448360 GCAGCAAAAGCTATGAGGTTAGAAG 60.448 44.000 3.72 0.00 34.42 2.85
2747 3122 4.396166 GCAGCAAAAGCTATGAGGTTAGAA 59.604 41.667 3.72 0.00 34.42 2.10
2748 3123 3.941483 GCAGCAAAAGCTATGAGGTTAGA 59.059 43.478 3.72 0.00 34.42 2.10
2749 3124 3.691118 TGCAGCAAAAGCTATGAGGTTAG 59.309 43.478 0.00 0.00 34.42 2.34
2750 3125 3.440173 GTGCAGCAAAAGCTATGAGGTTA 59.560 43.478 0.00 0.00 34.42 2.85
2751 3126 2.229784 GTGCAGCAAAAGCTATGAGGTT 59.770 45.455 0.00 0.00 37.57 3.50
2752 3127 1.815003 GTGCAGCAAAAGCTATGAGGT 59.185 47.619 0.00 0.00 0.00 3.85
2753 3128 2.089980 AGTGCAGCAAAAGCTATGAGG 58.910 47.619 0.00 0.00 0.00 3.86
2754 3129 3.844577 AAGTGCAGCAAAAGCTATGAG 57.155 42.857 0.00 0.00 0.00 2.90
2755 3130 3.822735 AGAAAGTGCAGCAAAAGCTATGA 59.177 39.130 0.00 0.00 0.00 2.15
2756 3131 3.918591 CAGAAAGTGCAGCAAAAGCTATG 59.081 43.478 0.00 0.00 0.00 2.23
2757 3132 3.822735 TCAGAAAGTGCAGCAAAAGCTAT 59.177 39.130 0.00 0.00 0.00 2.97
2758 3133 3.213506 TCAGAAAGTGCAGCAAAAGCTA 58.786 40.909 0.00 0.00 0.00 3.32
2759 3134 2.026641 TCAGAAAGTGCAGCAAAAGCT 58.973 42.857 0.00 0.00 0.00 3.74
2760 3135 2.497107 TCAGAAAGTGCAGCAAAAGC 57.503 45.000 0.00 0.00 0.00 3.51
2761 3136 3.244579 GCTTTCAGAAAGTGCAGCAAAAG 59.755 43.478 21.61 2.71 40.64 2.27
2762 3137 3.189285 GCTTTCAGAAAGTGCAGCAAAA 58.811 40.909 21.61 0.00 40.64 2.44
2763 3138 2.481795 GGCTTTCAGAAAGTGCAGCAAA 60.482 45.455 21.61 0.00 40.64 3.68
2764 3139 1.067516 GGCTTTCAGAAAGTGCAGCAA 59.932 47.619 21.61 0.00 40.64 3.91
2765 3140 0.670162 GGCTTTCAGAAAGTGCAGCA 59.330 50.000 21.61 0.00 40.64 4.41
2766 3141 0.957362 AGGCTTTCAGAAAGTGCAGC 59.043 50.000 21.61 9.58 40.64 5.25
2767 3142 2.224606 TCAGGCTTTCAGAAAGTGCAG 58.775 47.619 21.61 11.13 40.64 4.41
2768 3143 2.346766 TCAGGCTTTCAGAAAGTGCA 57.653 45.000 21.61 3.89 40.64 4.57
2769 3144 2.880890 TCTTCAGGCTTTCAGAAAGTGC 59.119 45.455 21.61 10.94 40.64 4.40
2770 3145 6.596888 TGATATCTTCAGGCTTTCAGAAAGTG 59.403 38.462 21.61 14.08 40.64 3.16
2771 3146 6.597280 GTGATATCTTCAGGCTTTCAGAAAGT 59.403 38.462 21.61 2.79 36.55 2.66
2772 3147 6.038050 GGTGATATCTTCAGGCTTTCAGAAAG 59.962 42.308 17.46 17.46 36.95 2.62
2773 3148 5.882557 GGTGATATCTTCAGGCTTTCAGAAA 59.117 40.000 3.98 0.00 34.17 2.52
2774 3149 5.431765 GGTGATATCTTCAGGCTTTCAGAA 58.568 41.667 3.98 0.00 34.17 3.02
2775 3150 4.141620 GGGTGATATCTTCAGGCTTTCAGA 60.142 45.833 3.98 0.00 34.17 3.27
2776 3151 4.133078 GGGTGATATCTTCAGGCTTTCAG 58.867 47.826 3.98 0.00 34.17 3.02
2777 3152 3.782523 AGGGTGATATCTTCAGGCTTTCA 59.217 43.478 3.98 0.00 34.17 2.69
2778 3153 4.429854 AGGGTGATATCTTCAGGCTTTC 57.570 45.455 3.98 0.00 34.17 2.62
2779 3154 4.870021 AAGGGTGATATCTTCAGGCTTT 57.130 40.909 3.98 0.00 34.17 3.51
2780 3155 4.476479 AGAAAGGGTGATATCTTCAGGCTT 59.524 41.667 3.98 0.00 34.17 4.35
2781 3156 4.043596 AGAAAGGGTGATATCTTCAGGCT 58.956 43.478 3.98 0.00 34.17 4.58
2782 3157 4.133078 CAGAAAGGGTGATATCTTCAGGC 58.867 47.826 3.98 0.00 34.17 4.85
2783 3158 5.620738 TCAGAAAGGGTGATATCTTCAGG 57.379 43.478 3.98 0.00 34.17 3.86
2784 3159 6.043012 AGGATCAGAAAGGGTGATATCTTCAG 59.957 42.308 3.98 0.00 34.69 3.02
2785 3160 5.907662 AGGATCAGAAAGGGTGATATCTTCA 59.092 40.000 3.98 0.00 34.69 3.02
2786 3161 6.432403 AGGATCAGAAAGGGTGATATCTTC 57.568 41.667 3.98 0.00 34.69 2.87
2787 3162 6.838401 AAGGATCAGAAAGGGTGATATCTT 57.162 37.500 3.98 0.00 34.69 2.40
2788 3163 7.960861 AGATAAGGATCAGAAAGGGTGATATCT 59.039 37.037 3.98 0.00 34.69 1.98
2789 3164 8.144862 AGATAAGGATCAGAAAGGGTGATATC 57.855 38.462 0.00 0.00 34.69 1.63
2790 3165 8.381636 CAAGATAAGGATCAGAAAGGGTGATAT 58.618 37.037 0.00 0.00 34.69 1.63
2791 3166 7.348274 ACAAGATAAGGATCAGAAAGGGTGATA 59.652 37.037 0.00 0.00 34.69 2.15
2792 3167 6.159398 ACAAGATAAGGATCAGAAAGGGTGAT 59.841 38.462 0.00 0.00 37.36 3.06
2793 3168 5.488919 ACAAGATAAGGATCAGAAAGGGTGA 59.511 40.000 0.00 0.00 34.17 4.02
2794 3169 5.587844 CACAAGATAAGGATCAGAAAGGGTG 59.412 44.000 0.00 0.00 34.17 4.61
2795 3170 5.339530 CCACAAGATAAGGATCAGAAAGGGT 60.340 44.000 0.00 0.00 34.17 4.34
2806 3181 1.213296 GCTCCCCCACAAGATAAGGA 58.787 55.000 0.00 0.00 0.00 3.36
2857 3233 4.039004 AGCTGTGGACAACAAATGCAATTA 59.961 37.500 0.00 0.00 38.67 1.40
2863 3239 3.067180 ACAGAAGCTGTGGACAACAAATG 59.933 43.478 0.00 0.00 43.63 2.32
2905 3281 2.481441 AGGGTGCATATGTCTTCAGGA 58.519 47.619 4.29 0.00 0.00 3.86
2910 3286 2.238646 TCGGAAAGGGTGCATATGTCTT 59.761 45.455 4.29 1.41 0.00 3.01
2914 3290 2.154462 GGATCGGAAAGGGTGCATATG 58.846 52.381 0.00 0.00 0.00 1.78
2929 3305 3.935203 ACTGTTGCACAAGATAAGGATCG 59.065 43.478 1.88 0.00 37.15 3.69
2945 3321 9.517609 ACGCTAGAAGATTAAGTATAACTGTTG 57.482 33.333 2.69 0.00 0.00 3.33
2946 3322 9.733219 GACGCTAGAAGATTAAGTATAACTGTT 57.267 33.333 0.00 0.00 0.00 3.16
2948 3324 9.900710 ATGACGCTAGAAGATTAAGTATAACTG 57.099 33.333 0.00 0.00 0.00 3.16
2968 3344 0.521291 TGCAGCAAAACCTATGACGC 59.479 50.000 0.00 0.00 0.00 5.19
2969 3345 3.492421 AATGCAGCAAAACCTATGACG 57.508 42.857 0.00 0.00 0.00 4.35
2970 3346 5.346822 CAGAAAATGCAGCAAAACCTATGAC 59.653 40.000 0.00 0.00 0.00 3.06
2974 3351 4.935352 ACAGAAAATGCAGCAAAACCTA 57.065 36.364 0.00 0.00 0.00 3.08
2987 3364 8.884323 TCATATATCTCCAGGCTTACAGAAAAT 58.116 33.333 0.00 0.00 0.00 1.82
2991 3368 6.435591 CAGTCATATATCTCCAGGCTTACAGA 59.564 42.308 0.00 0.00 0.00 3.41
2993 3370 5.047021 GCAGTCATATATCTCCAGGCTTACA 60.047 44.000 0.00 0.00 0.00 2.41
2995 3372 5.186603 CAGCAGTCATATATCTCCAGGCTTA 59.813 44.000 0.00 0.00 0.00 3.09
3003 3380 4.533919 ACAGCCAGCAGTCATATATCTC 57.466 45.455 0.00 0.00 0.00 2.75
3025 3414 5.537674 ACTTCAACATCTCTGGAAGCAAAAT 59.462 36.000 0.00 0.00 40.21 1.82
3088 3477 7.182060 AGTATAGCCCTCCAAATTCTCAAAAA 58.818 34.615 0.00 0.00 0.00 1.94
3089 3478 6.731467 AGTATAGCCCTCCAAATTCTCAAAA 58.269 36.000 0.00 0.00 0.00 2.44
3090 3479 6.327386 AGTATAGCCCTCCAAATTCTCAAA 57.673 37.500 0.00 0.00 0.00 2.69
3091 3480 5.975988 AGTATAGCCCTCCAAATTCTCAA 57.024 39.130 0.00 0.00 0.00 3.02
3092 3481 5.975988 AAGTATAGCCCTCCAAATTCTCA 57.024 39.130 0.00 0.00 0.00 3.27
3093 3482 7.442666 CACTTAAGTATAGCCCTCCAAATTCTC 59.557 40.741 8.04 0.00 0.00 2.87
3094 3483 7.127339 TCACTTAAGTATAGCCCTCCAAATTCT 59.873 37.037 8.04 0.00 0.00 2.40
3095 3484 7.280356 TCACTTAAGTATAGCCCTCCAAATTC 58.720 38.462 8.04 0.00 0.00 2.17
3096 3485 7.208064 TCACTTAAGTATAGCCCTCCAAATT 57.792 36.000 8.04 0.00 0.00 1.82
3097 3486 6.824958 TCACTTAAGTATAGCCCTCCAAAT 57.175 37.500 8.04 0.00 0.00 2.32
3098 3487 6.214819 AGTTCACTTAAGTATAGCCCTCCAAA 59.785 38.462 8.04 0.00 0.00 3.28
3099 3488 5.724854 AGTTCACTTAAGTATAGCCCTCCAA 59.275 40.000 8.04 0.00 0.00 3.53
3100 3489 5.278061 AGTTCACTTAAGTATAGCCCTCCA 58.722 41.667 8.04 0.00 0.00 3.86
3101 3490 5.873146 AGTTCACTTAAGTATAGCCCTCC 57.127 43.478 8.04 0.00 0.00 4.30
3102 3491 9.833917 AATTTAGTTCACTTAAGTATAGCCCTC 57.166 33.333 8.04 0.00 0.00 4.30
3261 3652 7.172868 TCATGACCCGTACTATGAAAAAGTA 57.827 36.000 0.00 0.00 0.00 2.24
3277 3668 5.300286 ACTTAGCAGCATATTTTCATGACCC 59.700 40.000 0.00 0.00 0.00 4.46
3322 3713 0.034337 GTTACGTGTCCAAGGCTCCA 59.966 55.000 0.00 0.00 0.00 3.86
3325 3716 0.470766 TTGGTTACGTGTCCAAGGCT 59.529 50.000 17.96 0.00 38.57 4.58
3352 3743 8.767478 AAAATCTAGTTTTGCAGAATCCATTG 57.233 30.769 0.00 0.00 38.56 2.82
3381 3772 2.849294 AGTTCACTGAAAGAGGGAGC 57.151 50.000 0.00 0.00 34.74 4.70
3478 3869 8.548877 TCAAGGATAGACTAAATTACCAAAGCT 58.451 33.333 0.00 0.00 0.00 3.74
3614 4005 5.388682 CGATTTGCAAAGCACTTGGTTTATG 60.389 40.000 25.53 2.55 43.02 1.90
3625 4016 6.763135 AGATAAGATACTCGATTTGCAAAGCA 59.237 34.615 25.53 12.61 36.47 3.91
3869 4277 4.884164 GCCCAAGCTACACAAGATAAAGAT 59.116 41.667 0.00 0.00 35.50 2.40
3895 4303 0.675083 TAGTCGAAAGTGCAACCGGA 59.325 50.000 9.46 0.00 37.80 5.14
3918 4326 3.929610 GGCTAACTCATCTGACTTCACAC 59.070 47.826 0.00 0.00 0.00 3.82
3929 4338 2.231215 AGCGTGATGGCTAACTCATC 57.769 50.000 0.00 0.00 42.62 2.92
3941 4350 7.391148 AAAAATAGGAACAACATAGCGTGAT 57.609 32.000 0.00 0.00 0.00 3.06
3991 4401 5.871524 ACTTAACTACGAGACGACAGACATA 59.128 40.000 0.00 0.00 0.00 2.29
4002 4412 6.128982 CGCGTATATCTCACTTAACTACGAGA 60.129 42.308 0.00 0.00 38.78 4.04
4005 4415 5.078084 CCGCGTATATCTCACTTAACTACG 58.922 45.833 4.92 0.00 35.02 3.51
4021 4431 1.272490 CCAGGATGATGTACCGCGTAT 59.728 52.381 4.92 0.00 39.69 3.06
4028 4438 5.186198 ACTAAAACAGCCAGGATGATGTAC 58.814 41.667 12.99 0.00 39.69 2.90
4032 4442 4.463891 CCAAACTAAAACAGCCAGGATGAT 59.536 41.667 12.99 0.00 39.69 2.45
4082 4492 8.884726 GGTGACTAAGAATTTTTCAGGTAGATC 58.115 37.037 0.00 0.00 0.00 2.75
4095 4505 5.077564 GGGGAAACAAGGTGACTAAGAATT 58.922 41.667 0.00 0.00 42.68 2.17
4096 4506 4.354087 AGGGGAAACAAGGTGACTAAGAAT 59.646 41.667 0.00 0.00 42.68 2.40
4097 4507 3.720002 AGGGGAAACAAGGTGACTAAGAA 59.280 43.478 0.00 0.00 42.68 2.52
4099 4509 3.412386 CAGGGGAAACAAGGTGACTAAG 58.588 50.000 0.00 0.00 42.68 2.18
4100 4510 2.107552 CCAGGGGAAACAAGGTGACTAA 59.892 50.000 0.00 0.00 42.68 2.24
4101 4511 1.702957 CCAGGGGAAACAAGGTGACTA 59.297 52.381 0.00 0.00 42.68 2.59
4103 4513 1.179174 GCCAGGGGAAACAAGGTGAC 61.179 60.000 0.00 0.00 0.00 3.67
4104 4514 1.152830 GCCAGGGGAAACAAGGTGA 59.847 57.895 0.00 0.00 0.00 4.02
4105 4515 1.908299 GGCCAGGGGAAACAAGGTG 60.908 63.158 0.00 0.00 0.00 4.00
4122 4625 2.343475 ATATGGAAGCAGGTGGGCGG 62.343 60.000 0.00 0.00 39.27 6.13
4202 5442 1.270571 GCCGAGGAGAATCAGGGATTC 60.271 57.143 10.25 10.25 46.05 2.52
4203 5443 0.761802 GCCGAGGAGAATCAGGGATT 59.238 55.000 0.00 0.00 36.25 3.01
4206 5447 1.333636 ACTGCCGAGGAGAATCAGGG 61.334 60.000 0.00 0.00 36.25 4.45
4247 5488 1.428448 TCGTCGAAATCTTGTGCCTG 58.572 50.000 0.00 0.00 0.00 4.85
4264 5505 0.298707 CAGTGCCGTGATTCGAATCG 59.701 55.000 28.07 19.74 42.86 3.34
4311 5552 6.400579 CGAAGCCTAATCTATGCACATAAG 57.599 41.667 0.00 0.00 0.00 1.73
4366 5611 1.021390 CACATTGACCAGGGCGACTC 61.021 60.000 0.00 0.00 0.00 3.36
4397 5642 3.371898 TGATTCAGCAGTGCTAAATGACG 59.628 43.478 18.48 4.10 36.40 4.35
4422 5667 6.970484 ACCAATTAAGCAACAAAGAGTAGTG 58.030 36.000 0.00 0.00 0.00 2.74
4423 5668 7.717875 TGTACCAATTAAGCAACAAAGAGTAGT 59.282 33.333 0.00 0.00 0.00 2.73
4424 5669 8.094798 TGTACCAATTAAGCAACAAAGAGTAG 57.905 34.615 0.00 0.00 0.00 2.57
4425 5670 7.717875 ACTGTACCAATTAAGCAACAAAGAGTA 59.282 33.333 0.00 0.00 0.00 2.59
4426 5671 6.546034 ACTGTACCAATTAAGCAACAAAGAGT 59.454 34.615 0.00 0.00 0.00 3.24
4427 5672 6.970484 ACTGTACCAATTAAGCAACAAAGAG 58.030 36.000 0.00 0.00 0.00 2.85
4428 5673 6.952773 ACTGTACCAATTAAGCAACAAAGA 57.047 33.333 0.00 0.00 0.00 2.52
4448 5701 4.482386 TCGCTTGTTTGTAGCTACTACTG 58.518 43.478 23.84 17.12 37.78 2.74
4449 5702 4.458295 TCTCGCTTGTTTGTAGCTACTACT 59.542 41.667 23.84 0.00 37.78 2.57
4450 5703 4.558080 GTCTCGCTTGTTTGTAGCTACTAC 59.442 45.833 23.84 20.20 37.46 2.73
4451 5704 4.458295 AGTCTCGCTTGTTTGTAGCTACTA 59.542 41.667 23.84 14.54 36.49 1.82
4452 5705 3.256136 AGTCTCGCTTGTTTGTAGCTACT 59.744 43.478 23.84 0.00 36.49 2.57
4453 5706 3.365220 CAGTCTCGCTTGTTTGTAGCTAC 59.635 47.826 17.30 17.30 36.49 3.58
4454 5707 3.575630 CAGTCTCGCTTGTTTGTAGCTA 58.424 45.455 0.00 0.00 36.49 3.32
4455 5708 2.408050 CAGTCTCGCTTGTTTGTAGCT 58.592 47.619 0.00 0.00 36.49 3.32
4459 5712 0.940126 CAGCAGTCTCGCTTGTTTGT 59.060 50.000 0.00 0.00 41.38 2.83
4467 5720 0.596083 ATATGTCGCAGCAGTCTCGC 60.596 55.000 0.00 0.00 0.00 5.03
4478 5731 5.530519 TGAGAAAACAAGTGATATGTCGC 57.469 39.130 0.00 0.00 35.06 5.19
4482 5735 6.110543 TCGCATGAGAAAACAAGTGATATG 57.889 37.500 0.00 0.00 0.00 1.78
4483 5736 6.539826 TCATCGCATGAGAAAACAAGTGATAT 59.460 34.615 2.39 0.00 36.86 1.63
4485 5738 4.696877 TCATCGCATGAGAAAACAAGTGAT 59.303 37.500 2.39 0.00 38.59 3.06
4486 5739 4.064388 TCATCGCATGAGAAAACAAGTGA 58.936 39.130 2.39 0.00 33.59 3.41
4487 5740 4.408993 TCATCGCATGAGAAAACAAGTG 57.591 40.909 2.39 0.00 33.59 3.16
4526 5779 2.536761 AATTCGACTCGGTTTGTGGA 57.463 45.000 0.00 0.00 0.00 4.02
4547 5800 6.515272 TGCAAGAGAAAAGAATGGATAACC 57.485 37.500 0.00 0.00 0.00 2.85
4551 5804 6.409524 TTGTTGCAAGAGAAAAGAATGGAT 57.590 33.333 0.00 0.00 0.00 3.41
4563 5816 5.100259 CCAAGCTATGATTTGTTGCAAGAG 58.900 41.667 0.00 0.00 0.00 2.85
4601 5854 3.512329 CCTCTATCTGCAGCAGATCAGAT 59.488 47.826 36.24 19.29 46.83 2.90
4639 5892 0.738762 CGAGTCCACATCTGTGCCTG 60.739 60.000 4.77 0.00 44.34 4.85
4661 5914 9.654663 TCTTTCTAGTTTAGAATAGTTCTTGCC 57.345 33.333 0.00 0.00 43.72 4.52
4665 5918 7.975058 GCCGTCTTTCTAGTTTAGAATAGTTCT 59.025 37.037 0.00 0.00 43.72 3.01
4677 5930 0.037605 CCCGTGCCGTCTTTCTAGTT 60.038 55.000 0.00 0.00 0.00 2.24
4731 5984 9.739276 AGTTATGAGAATTTCTCCACACATAAA 57.261 29.630 20.87 2.51 42.73 1.40
4732 5985 9.739276 AAGTTATGAGAATTTCTCCACACATAA 57.261 29.630 20.87 15.25 42.73 1.90
4733 5986 9.166173 CAAGTTATGAGAATTTCTCCACACATA 57.834 33.333 20.87 10.99 42.73 2.29
4734 5987 7.362401 GCAAGTTATGAGAATTTCTCCACACAT 60.362 37.037 20.87 11.84 42.73 3.21
4735 5988 6.072508 GCAAGTTATGAGAATTTCTCCACACA 60.073 38.462 20.87 5.71 42.73 3.72
4736 5989 6.150140 AGCAAGTTATGAGAATTTCTCCACAC 59.850 38.462 20.87 14.50 42.73 3.82
4740 5993 7.912773 GCTTTAGCAAGTTATGAGAATTTCTCC 59.087 37.037 20.87 7.85 40.80 3.71
4772 6025 0.254747 GATTTCCGACCATGTCCCCA 59.745 55.000 0.00 0.00 0.00 4.96
4794 6047 1.210967 TCACCTCAAGTTTTCCGGTGT 59.789 47.619 0.00 0.00 44.15 4.16
4848 6104 2.014128 CCAAATGGTAACTGGTAGCCG 58.986 52.381 0.00 0.00 37.61 5.52
4873 6129 2.618302 GGAGTAGACCCCAAGCCTTTTC 60.618 54.545 0.00 0.00 0.00 2.29
4886 6142 2.694109 AGCGTTTATGGAGGGAGTAGAC 59.306 50.000 0.00 0.00 0.00 2.59
4891 6147 2.990066 AAGAGCGTTTATGGAGGGAG 57.010 50.000 0.00 0.00 0.00 4.30
4894 6150 5.875359 AGAAGTAAAAGAGCGTTTATGGAGG 59.125 40.000 0.00 0.00 0.00 4.30
4911 6179 9.765295 ACTACTCCCTCTGTAATAAAGAAGTAA 57.235 33.333 0.00 0.00 0.00 2.24
4916 6184 8.780003 AGACTACTACTCCCTCTGTAATAAAGA 58.220 37.037 0.00 0.00 0.00 2.52
4917 6185 8.983702 AGACTACTACTCCCTCTGTAATAAAG 57.016 38.462 0.00 0.00 0.00 1.85
4921 6189 7.674772 ACAAAAGACTACTACTCCCTCTGTAAT 59.325 37.037 0.00 0.00 0.00 1.89
4990 6282 4.218417 ACAAATAGGATGCACCAAGTCAAC 59.782 41.667 7.86 0.00 42.04 3.18
5005 6297 6.210078 GGTTAGATCAGACTCGACAAATAGG 58.790 44.000 0.00 0.00 0.00 2.57
5014 6306 5.520649 GCTAAAAAGGGTTAGATCAGACTCG 59.479 44.000 0.00 0.00 33.62 4.18
5027 6319 0.468400 TTGCGGTGGCTAAAAAGGGT 60.468 50.000 0.00 0.00 40.82 4.34
5030 6322 0.386731 CGGTTGCGGTGGCTAAAAAG 60.387 55.000 0.00 0.00 40.82 2.27
5078 6370 2.602211 CGTGCACAGAGACATCAATCTC 59.398 50.000 18.64 0.00 44.76 2.75
5125 6419 2.104111 TCTCACGACCACACTCCAAATT 59.896 45.455 0.00 0.00 0.00 1.82
5130 6424 0.894184 TCCTCTCACGACCACACTCC 60.894 60.000 0.00 0.00 0.00 3.85
5135 6429 2.179517 CGCTCCTCTCACGACCAC 59.820 66.667 0.00 0.00 0.00 4.16
5139 6433 3.500642 CGCTCGCTCCTCTCACGA 61.501 66.667 0.00 0.00 0.00 4.35
5150 6444 1.084370 AAACATAGACAGGCGCTCGC 61.084 55.000 7.64 5.60 41.06 5.03
5207 6505 0.107017 GTGGTATCTGCACCTGCCAT 60.107 55.000 4.24 0.00 39.50 4.40
5210 6508 1.755179 AATGTGGTATCTGCACCTGC 58.245 50.000 0.00 0.00 39.50 4.85
5212 6510 3.055385 ACGTAAATGTGGTATCTGCACCT 60.055 43.478 0.00 0.00 39.50 4.00
5214 6512 4.201783 GGAACGTAAATGTGGTATCTGCAC 60.202 45.833 0.00 0.00 0.00 4.57
5218 6516 4.766375 CCAGGAACGTAAATGTGGTATCT 58.234 43.478 0.00 0.00 0.00 1.98
5221 6519 2.303600 AGCCAGGAACGTAAATGTGGTA 59.696 45.455 0.00 0.00 0.00 3.25
5222 6520 1.073284 AGCCAGGAACGTAAATGTGGT 59.927 47.619 0.00 0.00 0.00 4.16
5223 6521 1.821216 AGCCAGGAACGTAAATGTGG 58.179 50.000 0.00 0.00 0.00 4.17
5224 6522 3.749088 TGTTAGCCAGGAACGTAAATGTG 59.251 43.478 0.00 0.00 0.00 3.21
5225 6523 4.010667 TGTTAGCCAGGAACGTAAATGT 57.989 40.909 0.00 0.00 0.00 2.71
5226 6524 5.365403 TTTGTTAGCCAGGAACGTAAATG 57.635 39.130 0.00 0.00 0.00 2.32
5227 6525 5.621329 GCATTTGTTAGCCAGGAACGTAAAT 60.621 40.000 0.00 0.00 0.00 1.40
5228 6526 4.320641 GCATTTGTTAGCCAGGAACGTAAA 60.321 41.667 0.00 0.00 0.00 2.01
5231 6536 1.539827 GCATTTGTTAGCCAGGAACGT 59.460 47.619 0.00 0.00 0.00 3.99
5236 6541 0.889994 TGCTGCATTTGTTAGCCAGG 59.110 50.000 0.00 0.00 36.64 4.45
5254 6559 9.803130 GTCAAGATACGTTCATGAATGATAATG 57.197 33.333 29.89 20.39 34.09 1.90
5255 6560 8.703336 CGTCAAGATACGTTCATGAATGATAAT 58.297 33.333 29.89 19.82 34.09 1.28
5256 6561 7.306574 GCGTCAAGATACGTTCATGAATGATAA 60.307 37.037 29.89 16.61 44.64 1.75
5270 6753 7.082602 AGTAGGTAATAATGCGTCAAGATACG 58.917 38.462 0.00 0.00 45.58 3.06
5271 6754 7.541437 GGAGTAGGTAATAATGCGTCAAGATAC 59.459 40.741 0.00 0.00 0.00 2.24
5273 6756 6.456501 GGAGTAGGTAATAATGCGTCAAGAT 58.543 40.000 0.00 0.00 0.00 2.40
5274 6757 5.221382 GGGAGTAGGTAATAATGCGTCAAGA 60.221 44.000 0.00 0.00 0.00 3.02
5275 6758 4.989168 GGGAGTAGGTAATAATGCGTCAAG 59.011 45.833 0.00 0.00 0.00 3.02
5276 6759 4.652421 AGGGAGTAGGTAATAATGCGTCAA 59.348 41.667 0.00 0.00 0.00 3.18
5278 6761 4.321824 GGAGGGAGTAGGTAATAATGCGTC 60.322 50.000 0.00 0.00 35.00 5.19
5279 6762 3.577415 GGAGGGAGTAGGTAATAATGCGT 59.423 47.826 0.00 0.00 0.00 5.24
5280 6763 3.367087 CGGAGGGAGTAGGTAATAATGCG 60.367 52.174 0.00 0.00 0.00 4.73
5281 6764 3.577415 ACGGAGGGAGTAGGTAATAATGC 59.423 47.826 0.00 0.00 0.00 3.56
5282 6765 4.220163 GGACGGAGGGAGTAGGTAATAATG 59.780 50.000 0.00 0.00 0.00 1.90
5283 6766 4.414677 GGACGGAGGGAGTAGGTAATAAT 58.585 47.826 0.00 0.00 0.00 1.28
5286 6769 1.133231 GGGACGGAGGGAGTAGGTAAT 60.133 57.143 0.00 0.00 0.00 1.89
5287 6770 0.259938 GGGACGGAGGGAGTAGGTAA 59.740 60.000 0.00 0.00 0.00 2.85
5288 6771 0.920763 TGGGACGGAGGGAGTAGGTA 60.921 60.000 0.00 0.00 0.00 3.08
5289 6772 1.807771 TTGGGACGGAGGGAGTAGGT 61.808 60.000 0.00 0.00 0.00 3.08
5290 6773 0.616679 TTTGGGACGGAGGGAGTAGG 60.617 60.000 0.00 0.00 0.00 3.18
5291 6774 1.272807 TTTTGGGACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
5293 6776 0.328258 CATTTTGGGACGGAGGGAGT 59.672 55.000 0.00 0.00 0.00 3.85
5294 6777 0.618458 TCATTTTGGGACGGAGGGAG 59.382 55.000 0.00 0.00 0.00 4.30
5295 6778 0.618458 CTCATTTTGGGACGGAGGGA 59.382 55.000 0.00 0.00 0.00 4.20
5296 6779 0.328258 ACTCATTTTGGGACGGAGGG 59.672 55.000 0.00 0.00 0.00 4.30
5297 6780 1.271379 ACACTCATTTTGGGACGGAGG 60.271 52.381 0.00 0.00 0.00 4.30
5298 6781 2.076863 GACACTCATTTTGGGACGGAG 58.923 52.381 0.00 0.00 0.00 4.63
5299 6782 1.697432 AGACACTCATTTTGGGACGGA 59.303 47.619 0.00 0.00 0.00 4.69
5300 6783 2.076863 GAGACACTCATTTTGGGACGG 58.923 52.381 0.00 0.00 0.00 4.79
5302 6785 3.077359 CCTGAGACACTCATTTTGGGAC 58.923 50.000 1.92 0.00 39.92 4.46
5303 6786 2.040278 CCCTGAGACACTCATTTTGGGA 59.960 50.000 14.59 0.00 41.78 4.37
5304 6787 2.040278 TCCCTGAGACACTCATTTTGGG 59.960 50.000 13.94 13.94 41.07 4.12
5305 6788 3.077359 GTCCCTGAGACACTCATTTTGG 58.923 50.000 1.92 0.79 45.55 3.28
5307 6790 2.289694 CCGTCCCTGAGACACTCATTTT 60.290 50.000 1.92 0.00 46.69 1.82
5311 6794 0.609406 CTCCGTCCCTGAGACACTCA 60.609 60.000 0.00 0.00 46.69 3.41
5312 6795 1.316706 CCTCCGTCCCTGAGACACTC 61.317 65.000 0.00 0.00 46.69 3.51
5313 6796 1.304547 CCTCCGTCCCTGAGACACT 60.305 63.158 0.00 0.00 46.69 3.55
5314 6797 2.352032 CCCTCCGTCCCTGAGACAC 61.352 68.421 0.00 0.00 46.69 3.67
5315 6798 2.037367 CCCTCCGTCCCTGAGACA 59.963 66.667 0.00 0.00 46.69 3.41
5316 6799 2.037527 ACCCTCCGTCCCTGAGAC 59.962 66.667 0.00 0.00 42.54 3.36
5317 6800 2.037367 CACCCTCCGTCCCTGAGA 59.963 66.667 0.00 0.00 31.26 3.27
5318 6801 2.283966 ACACCCTCCGTCCCTGAG 60.284 66.667 0.00 0.00 0.00 3.35
5319 6802 2.603473 CACACCCTCCGTCCCTGA 60.603 66.667 0.00 0.00 0.00 3.86
5320 6803 3.706373 CCACACCCTCCGTCCCTG 61.706 72.222 0.00 0.00 0.00 4.45
5321 6804 3.907027 CTCCACACCCTCCGTCCCT 62.907 68.421 0.00 0.00 0.00 4.20
5322 6805 2.793317 TACTCCACACCCTCCGTCCC 62.793 65.000 0.00 0.00 0.00 4.46
5324 6807 0.611340 ACTACTCCACACCCTCCGTC 60.611 60.000 0.00 0.00 0.00 4.79
5325 6808 0.700564 TACTACTCCACACCCTCCGT 59.299 55.000 0.00 0.00 0.00 4.69
5326 6809 2.068834 ATACTACTCCACACCCTCCG 57.931 55.000 0.00 0.00 0.00 4.63
5327 6810 4.181799 AGTATACTACTCCACACCCTCC 57.818 50.000 2.75 0.00 32.47 4.30
5328 6811 4.761227 GCTAGTATACTACTCCACACCCTC 59.239 50.000 8.59 0.00 40.14 4.30
5330 6813 4.519730 CAGCTAGTATACTACTCCACACCC 59.480 50.000 8.59 0.00 40.14 4.61
5332 6815 4.023021 GGCAGCTAGTATACTACTCCACAC 60.023 50.000 8.59 0.00 40.14 3.82
5333 6816 4.142790 GGCAGCTAGTATACTACTCCACA 58.857 47.826 8.59 0.00 40.14 4.17
5334 6817 3.188873 CGGCAGCTAGTATACTACTCCAC 59.811 52.174 8.59 0.00 40.14 4.02
5335 6818 3.409570 CGGCAGCTAGTATACTACTCCA 58.590 50.000 8.59 0.00 40.14 3.86
5336 6819 2.748532 CCGGCAGCTAGTATACTACTCC 59.251 54.545 8.59 11.93 40.14 3.85
5337 6820 3.672808 TCCGGCAGCTAGTATACTACTC 58.327 50.000 8.59 4.24 40.14 2.59
5338 6821 3.072768 ACTCCGGCAGCTAGTATACTACT 59.927 47.826 8.59 8.47 42.68 2.57
5339 6822 3.410508 ACTCCGGCAGCTAGTATACTAC 58.589 50.000 8.59 6.47 0.00 2.73
5341 6824 2.660670 ACTCCGGCAGCTAGTATACT 57.339 50.000 10.87 10.87 0.00 2.12
5342 6825 6.696441 ATAATACTCCGGCAGCTAGTATAC 57.304 41.667 11.89 0.00 35.82 1.47
5343 6826 7.713734 AAATAATACTCCGGCAGCTAGTATA 57.286 36.000 11.89 3.69 35.82 1.47
5344 6827 6.607004 AAATAATACTCCGGCAGCTAGTAT 57.393 37.500 6.88 6.88 37.90 2.12
5345 6828 6.415206 AAAATAATACTCCGGCAGCTAGTA 57.585 37.500 0.00 0.00 0.00 1.82
5377 6860 3.069980 GATCACCTCGCCTCGCAGT 62.070 63.158 0.00 0.00 0.00 4.40
5401 6956 2.002127 GCAGATCGCTTGGAAGACG 58.998 57.895 2.84 0.00 37.77 4.18
5441 6996 1.880027 GTCAAGTTTCAACGGCTGGAT 59.120 47.619 0.00 0.00 0.00 3.41
5459 7014 1.609072 GACAAAGGAAGGGTGCTTGTC 59.391 52.381 0.00 0.00 35.28 3.18
5467 7022 2.380410 CGTCGCGACAAAGGAAGGG 61.380 63.158 35.71 14.63 0.00 3.95
5471 7026 1.209383 CTCTCGTCGCGACAAAGGA 59.791 57.895 35.71 23.81 0.00 3.36
5472 7027 2.437343 GCTCTCGTCGCGACAAAGG 61.437 63.158 35.71 23.98 0.00 3.11
5473 7028 1.442857 AGCTCTCGTCGCGACAAAG 60.443 57.895 35.71 29.85 0.00 2.77
5484 7069 4.263209 AGCCGATCGCAGCTCTCG 62.263 66.667 10.32 6.52 41.38 4.04
5517 7102 1.274728 AGACAGACATCACAGCTCACC 59.725 52.381 0.00 0.00 0.00 4.02
5540 7125 3.254166 TGAGAATCTGCTGCTTGTTTTCC 59.746 43.478 0.00 0.00 34.92 3.13
5568 7153 6.048732 TGCTTGTTTTCCTTCCTTCTTTTT 57.951 33.333 0.00 0.00 0.00 1.94
5569 7154 5.664457 CTGCTTGTTTTCCTTCCTTCTTTT 58.336 37.500 0.00 0.00 0.00 2.27
5570 7155 4.442052 GCTGCTTGTTTTCCTTCCTTCTTT 60.442 41.667 0.00 0.00 0.00 2.52
5571 7156 3.068732 GCTGCTTGTTTTCCTTCCTTCTT 59.931 43.478 0.00 0.00 0.00 2.52
5572 7157 2.625314 GCTGCTTGTTTTCCTTCCTTCT 59.375 45.455 0.00 0.00 0.00 2.85
5573 7158 2.625314 AGCTGCTTGTTTTCCTTCCTTC 59.375 45.455 0.00 0.00 0.00 3.46
5574 7159 2.625314 GAGCTGCTTGTTTTCCTTCCTT 59.375 45.455 2.53 0.00 0.00 3.36
5575 7160 2.234143 GAGCTGCTTGTTTTCCTTCCT 58.766 47.619 2.53 0.00 0.00 3.36
5576 7161 1.956477 TGAGCTGCTTGTTTTCCTTCC 59.044 47.619 2.53 0.00 0.00 3.46
5577 7162 2.606551 GCTGAGCTGCTTGTTTTCCTTC 60.607 50.000 2.53 0.00 0.00 3.46
5578 7163 1.339291 GCTGAGCTGCTTGTTTTCCTT 59.661 47.619 2.53 0.00 0.00 3.36
5579 7164 0.957362 GCTGAGCTGCTTGTTTTCCT 59.043 50.000 2.53 0.00 0.00 3.36
5580 7165 0.957362 AGCTGAGCTGCTTGTTTTCC 59.043 50.000 5.97 0.00 40.93 3.13
5581 7166 1.605710 TGAGCTGAGCTGCTTGTTTTC 59.394 47.619 13.71 0.00 44.17 2.29
5582 7167 1.683943 TGAGCTGAGCTGCTTGTTTT 58.316 45.000 13.71 0.00 44.17 2.43
5583 7168 1.683943 TTGAGCTGAGCTGCTTGTTT 58.316 45.000 13.71 0.00 44.17 2.83
5584 7169 1.336125 GTTTGAGCTGAGCTGCTTGTT 59.664 47.619 13.71 0.00 44.17 2.83
5585 7170 0.950116 GTTTGAGCTGAGCTGCTTGT 59.050 50.000 13.71 0.00 44.17 3.16
5586 7171 0.949397 TGTTTGAGCTGAGCTGCTTG 59.051 50.000 13.71 1.13 44.17 4.01
5587 7172 1.202734 TCTGTTTGAGCTGAGCTGCTT 60.203 47.619 13.71 0.00 44.17 3.91
5589 7174 1.233019 TTCTGTTTGAGCTGAGCTGC 58.767 50.000 13.71 4.15 39.88 5.25
5590 7175 2.349249 CGTTTCTGTTTGAGCTGAGCTG 60.349 50.000 13.71 0.00 39.88 4.24
5591 7176 1.869767 CGTTTCTGTTTGAGCTGAGCT 59.130 47.619 6.69 6.69 43.88 4.09
5592 7177 1.661460 GCGTTTCTGTTTGAGCTGAGC 60.661 52.381 0.00 0.00 0.00 4.26
5593 7178 1.397693 CGCGTTTCTGTTTGAGCTGAG 60.398 52.381 0.00 0.00 0.00 3.35
5594 7179 0.581529 CGCGTTTCTGTTTGAGCTGA 59.418 50.000 0.00 0.00 0.00 4.26
5595 7180 0.581529 TCGCGTTTCTGTTTGAGCTG 59.418 50.000 5.77 0.00 0.00 4.24
5596 7181 0.582005 GTCGCGTTTCTGTTTGAGCT 59.418 50.000 5.77 0.00 0.00 4.09
5597 7182 0.718220 CGTCGCGTTTCTGTTTGAGC 60.718 55.000 5.77 0.00 0.00 4.26
5598 7183 0.718220 GCGTCGCGTTTCTGTTTGAG 60.718 55.000 5.77 0.00 0.00 3.02
5599 7184 1.274476 GCGTCGCGTTTCTGTTTGA 59.726 52.632 5.77 0.00 0.00 2.69
5600 7185 3.796709 GCGTCGCGTTTCTGTTTG 58.203 55.556 5.77 0.00 0.00 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.