Multiple sequence alignment - TraesCS4B01G196600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G196600 chr4B 100.000 6775 0 0 1 6775 423363789 423357015 0.000000e+00 12512.0
1 TraesCS4B01G196600 chr4B 88.845 251 21 5 1985 2231 447455470 447455223 1.100000e-77 302.0
2 TraesCS4B01G196600 chr4D 95.017 3452 117 25 287 3695 341527477 341524038 0.000000e+00 5371.0
3 TraesCS4B01G196600 chr4D 97.328 1684 36 6 3637 5317 341524038 341522361 0.000000e+00 2852.0
4 TraesCS4B01G196600 chr4D 87.226 822 52 25 5310 6099 341522144 341521344 0.000000e+00 887.0
5 TraesCS4B01G196600 chr4D 82.337 368 57 8 1 361 440278943 440279309 5.100000e-81 313.0
6 TraesCS4B01G196600 chr4D 88.710 248 20 6 1987 2228 51076346 51076101 5.140000e-76 296.0
7 TraesCS4B01G196600 chr4D 91.748 206 11 5 3667 3869 355283523 355283725 1.440000e-71 281.0
8 TraesCS4B01G196600 chr4A 90.408 2158 123 42 1 2125 125377449 125379555 0.000000e+00 2761.0
9 TraesCS4B01G196600 chr4A 90.854 995 58 18 3877 4851 125382789 125383770 0.000000e+00 1303.0
10 TraesCS4B01G196600 chr4A 93.373 830 25 9 2540 3344 125379980 125380804 0.000000e+00 1201.0
11 TraesCS4B01G196600 chr4A 88.889 801 57 22 5310 6093 125384583 125385368 0.000000e+00 957.0
12 TraesCS4B01G196600 chr4A 94.907 432 22 0 4848 5279 125383842 125384273 0.000000e+00 676.0
13 TraesCS4B01G196600 chr4A 91.053 380 23 2 2161 2529 125379545 125379924 2.820000e-138 503.0
14 TraesCS4B01G196600 chr4A 86.010 386 27 11 3343 3703 125382423 125382806 8.240000e-104 388.0
15 TraesCS4B01G196600 chr4A 87.333 150 16 3 550 697 352481898 352481750 1.170000e-37 169.0
16 TraesCS4B01G196600 chr1B 84.463 354 48 5 15 361 573580182 573579829 6.510000e-90 342.0
17 TraesCS4B01G196600 chr1B 93.035 201 6 7 3686 3883 246770895 246770700 3.090000e-73 287.0
18 TraesCS4B01G196600 chr6D 82.337 368 59 3 1 362 61019902 61019535 1.420000e-81 315.0
19 TraesCS4B01G196600 chr3A 82.086 374 58 7 1 366 640842467 640842095 1.830000e-80 311.0
20 TraesCS4B01G196600 chr3A 82.016 367 61 4 1 363 8608422 8608057 2.370000e-79 307.0
21 TraesCS4B01G196600 chr3A 96.629 178 5 1 3698 3875 57159278 57159454 1.850000e-75 294.0
22 TraesCS4B01G196600 chr3A 81.053 380 60 8 1 372 25577594 25577219 6.650000e-75 292.0
23 TraesCS4B01G196600 chr3A 88.983 236 20 3 1992 2224 501225640 501225872 3.090000e-73 287.0
24 TraesCS4B01G196600 chr3A 84.177 158 19 5 529 682 19358633 19358478 1.520000e-31 148.0
25 TraesCS4B01G196600 chrUn 96.133 181 5 2 3701 3880 112608251 112608430 1.850000e-75 294.0
26 TraesCS4B01G196600 chr2A 96.133 181 5 2 3689 3869 133338600 133338778 1.850000e-75 294.0
27 TraesCS4B01G196600 chr2A 86.792 159 20 1 532 689 69311054 69311212 6.980000e-40 176.0
28 TraesCS4B01G196600 chr2A 84.277 159 20 5 542 697 1304410 1304566 4.230000e-32 150.0
29 TraesCS4B01G196600 chr2A 85.897 78 9 2 412 488 101832915 101832839 1.570000e-11 82.4
30 TraesCS4B01G196600 chr2A 78.704 108 18 5 406 512 69311212 69311109 4.390000e-07 67.6
31 TraesCS4B01G196600 chr2A 79.091 110 14 6 406 512 168839259 168839362 4.390000e-07 67.6
32 TraesCS4B01G196600 chr7D 81.667 360 59 4 9 362 3103733 3104091 6.650000e-75 292.0
33 TraesCS4B01G196600 chr7D 81.667 360 59 4 9 362 3160035 3159677 6.650000e-75 292.0
34 TraesCS4B01G196600 chr7D 80.000 110 11 8 407 512 439997153 439997255 3.390000e-08 71.3
35 TraesCS4B01G196600 chr5D 96.610 177 5 1 3703 3879 319691588 319691413 6.650000e-75 292.0
36 TraesCS4B01G196600 chr3D 81.117 376 60 9 1 366 501309368 501308994 2.390000e-74 291.0
37 TraesCS4B01G196600 chr3D 84.615 156 21 3 529 682 17531796 17531950 1.180000e-32 152.0
38 TraesCS4B01G196600 chr7A 95.604 182 5 2 3697 3876 426576415 426576595 8.600000e-74 289.0
39 TraesCS4B01G196600 chr3B 96.067 178 6 1 3703 3880 106897761 106897585 8.600000e-74 289.0
40 TraesCS4B01G196600 chr3B 84.270 267 32 9 1982 2245 739874457 739874198 1.130000e-62 252.0
41 TraesCS4B01G196600 chr3B 80.000 115 18 4 406 519 331237176 331237286 5.630000e-11 80.5
42 TraesCS4B01G196600 chr1D 87.967 241 27 2 1991 2229 464601167 464601407 4.000000e-72 283.0
43 TraesCS4B01G196600 chr1D 78.037 214 26 18 406 610 18986172 18985971 1.540000e-21 115.0
44 TraesCS4B01G196600 chr5A 86.822 258 25 8 1982 2233 631868079 631868333 5.170000e-71 279.0
45 TraesCS4B01G196600 chr5A 84.884 258 33 6 1982 2236 26949428 26949682 8.720000e-64 255.0
46 TraesCS4B01G196600 chr5A 88.406 69 8 0 406 474 624799182 624799114 4.350000e-12 84.2
47 TraesCS4B01G196600 chr2B 85.714 168 22 2 529 694 438744087 438743920 6.980000e-40 176.0
48 TraesCS4B01G196600 chr2B 84.516 155 17 7 545 697 166665483 166665334 5.480000e-31 147.0
49 TraesCS4B01G196600 chr1A 85.294 170 20 5 535 701 511603324 511603157 3.250000e-38 171.0
50 TraesCS4B01G196600 chr6A 85.882 85 8 4 406 488 585347995 585348077 3.370000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G196600 chr4B 423357015 423363789 6774 True 12512.000000 12512 100.000000 1 6775 1 chr4B.!!$R1 6774
1 TraesCS4B01G196600 chr4D 341521344 341527477 6133 True 3036.666667 5371 93.190333 287 6099 3 chr4D.!!$R2 5812
2 TraesCS4B01G196600 chr4A 125377449 125385368 7919 False 1112.714286 2761 90.784857 1 6093 7 chr4A.!!$F1 6092

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
177 181 0.110147 ACTGACTCGAAGAAGCGTCG 60.110 55.0 0.00 0.0 39.88 5.12 F
956 986 0.635009 ACCCCGTCTCCTCTCCATTA 59.365 55.0 0.00 0.0 0.00 1.90 F
2049 2096 1.386533 TGGCAACCCGAACGTTTTTA 58.613 45.0 0.46 0.0 0.00 1.52 F
2410 2472 0.373716 CTCGGTGCGAACATAAAGCC 59.626 55.0 0.00 0.0 34.74 4.35 F
3753 5587 0.625849 CCCCACTTATGCCAAGAGGT 59.374 55.0 9.67 0.0 37.19 3.85 F
4437 6271 0.104620 ACTATCCCCGCCCATTAGGT 60.105 55.0 0.00 0.0 38.26 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2141 2192 0.179043 TAGTTGACGCAAGGTGGCAA 60.179 50.000 0.00 0.0 38.85 4.52 R
2323 2377 0.321122 AGCAGCTAGGCTCACACAAC 60.321 55.000 0.00 0.0 41.05 3.32 R
3837 5671 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.0 34.99 3.82 R
4409 6243 1.296727 GCGGGGATAGTACAGCAAAC 58.703 55.000 0.00 0.0 0.00 2.93 R
4703 6557 0.099436 GCAGGCATGACAAACCGATC 59.901 55.000 0.62 0.0 0.00 3.69 R
6160 8435 0.034896 TTTGCCTCGTCAAGTCTCCC 59.965 55.000 0.00 0.0 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 7.679783 TCTAAAGAATCTGACACCAAATCTCA 58.320 34.615 0.00 0.00 0.00 3.27
36 37 4.583871 AGAATCTGACACCAAATCTCACC 58.416 43.478 0.00 0.00 0.00 4.02
42 43 0.110238 CACCAAATCTCACCGTTGCG 60.110 55.000 0.00 0.00 0.00 4.85
45 46 2.006888 CCAAATCTCACCGTTGCGTAT 58.993 47.619 0.00 0.00 0.00 3.06
100 101 1.069978 GAGCTGGCAGGAATCTAGACC 59.930 57.143 17.64 0.00 0.00 3.85
101 102 0.249657 GCTGGCAGGAATCTAGACCG 60.250 60.000 17.64 0.00 0.00 4.79
108 109 0.963225 GGAATCTAGACCGGAGCTCC 59.037 60.000 23.79 23.79 0.00 4.70
125 126 1.198637 CTCCGTATAATCCGTCCCGAC 59.801 57.143 0.00 0.00 0.00 4.79
146 147 2.094700 CGAACGAACTTGAGGAGGATCA 60.095 50.000 0.00 0.00 36.25 2.92
147 148 3.614150 CGAACGAACTTGAGGAGGATCAA 60.614 47.826 0.00 0.00 37.60 2.57
150 151 3.578716 ACGAACTTGAGGAGGATCAAAGA 59.421 43.478 0.00 0.00 38.66 2.52
152 153 3.990959 ACTTGAGGAGGATCAAAGACC 57.009 47.619 0.00 0.00 38.66 3.85
164 165 4.561105 GATCAAAGACCGAAAGACTGACT 58.439 43.478 0.00 0.00 0.00 3.41
165 166 3.978687 TCAAAGACCGAAAGACTGACTC 58.021 45.455 0.00 0.00 0.00 3.36
175 179 1.240256 AGACTGACTCGAAGAAGCGT 58.760 50.000 0.00 0.00 34.09 5.07
177 181 0.110147 ACTGACTCGAAGAAGCGTCG 60.110 55.000 0.00 0.00 39.88 5.12
184 188 1.447838 GAAGAAGCGTCGCCATCCA 60.448 57.895 14.86 0.00 0.00 3.41
188 192 4.592192 AGCGTCGCCATCCATCCG 62.592 66.667 14.86 0.00 0.00 4.18
189 193 4.585526 GCGTCGCCATCCATCCGA 62.586 66.667 5.75 0.00 0.00 4.55
190 194 2.355126 CGTCGCCATCCATCCGAG 60.355 66.667 0.00 0.00 0.00 4.63
191 195 2.663188 GTCGCCATCCATCCGAGC 60.663 66.667 0.00 0.00 0.00 5.03
195 199 4.240103 CCATCCATCCGAGCGCCA 62.240 66.667 2.29 0.00 0.00 5.69
196 200 2.969238 CATCCATCCGAGCGCCAC 60.969 66.667 2.29 0.00 0.00 5.01
201 206 4.162690 ATCCGAGCGCCACCCTTC 62.163 66.667 2.29 0.00 0.00 3.46
214 219 4.399303 CGCCACCCTTCTGAGAATTAAAAT 59.601 41.667 0.00 0.00 0.00 1.82
215 220 5.449177 CGCCACCCTTCTGAGAATTAAAATC 60.449 44.000 0.00 0.00 0.00 2.17
219 224 7.283354 CCACCCTTCTGAGAATTAAAATCCTAC 59.717 40.741 0.00 0.00 0.00 3.18
221 226 6.773200 CCCTTCTGAGAATTAAAATCCTACCC 59.227 42.308 0.00 0.00 0.00 3.69
234 239 1.497716 TCCTACCCATCTAAGCCGAGA 59.502 52.381 0.00 0.00 0.00 4.04
245 251 4.215908 TCTAAGCCGAGACACAGGAATAT 58.784 43.478 0.00 0.00 0.00 1.28
250 256 3.226777 CCGAGACACAGGAATATCCTCT 58.773 50.000 0.00 0.00 45.66 3.69
252 258 3.254657 CGAGACACAGGAATATCCTCTCC 59.745 52.174 0.00 0.00 45.66 3.71
254 260 1.689273 ACACAGGAATATCCTCTCCGC 59.311 52.381 0.00 0.00 45.66 5.54
293 299 3.231736 GCGGAGGGGAGGCGAATA 61.232 66.667 0.00 0.00 0.00 1.75
300 306 1.623542 GGGGAGGCGAATACACAGGT 61.624 60.000 0.00 0.00 0.00 4.00
308 314 2.793933 CGAATACACAGGTTCGTCGAT 58.206 47.619 0.00 0.00 41.52 3.59
316 322 1.405463 CAGGTTCGTCGATGGAGATCA 59.595 52.381 4.48 0.00 0.00 2.92
327 333 4.410228 TCGATGGAGATCAAAGGGAAGAAT 59.590 41.667 0.00 0.00 0.00 2.40
370 378 4.319839 CGAGGAGAAAGAAAAACTTGGCTC 60.320 45.833 0.00 0.00 38.98 4.70
377 385 2.695147 AGAAAAACTTGGCTCTTGGGTG 59.305 45.455 0.00 0.00 0.00 4.61
379 387 1.402787 AAACTTGGCTCTTGGGTGTG 58.597 50.000 0.00 0.00 0.00 3.82
403 411 1.079819 CCTCGGCAGAATCACGTGT 60.080 57.895 16.51 0.00 0.00 4.49
447 456 8.995220 ACTTCACATATTAGCTTTGACGTAAAA 58.005 29.630 0.00 0.00 0.00 1.52
450 459 8.941977 TCACATATTAGCTTTGACGTAAAACAT 58.058 29.630 0.00 0.00 0.00 2.71
481 490 6.633500 AAAGTTTGATCAAGTTCATCGGAA 57.367 33.333 8.41 0.00 0.00 4.30
482 491 6.633500 AAGTTTGATCAAGTTCATCGGAAA 57.367 33.333 8.41 0.00 34.13 3.13
483 492 6.633500 AGTTTGATCAAGTTCATCGGAAAA 57.367 33.333 8.41 0.00 34.13 2.29
484 493 7.038154 AGTTTGATCAAGTTCATCGGAAAAA 57.962 32.000 8.41 0.00 34.13 1.94
650 671 6.975772 TGGTCAAATTTTAGAAGTTTGAACCG 59.024 34.615 18.04 0.00 44.74 4.44
659 680 7.562454 TTAGAAGTTTGAACCGAGACAAATT 57.438 32.000 0.00 0.00 38.09 1.82
666 687 9.840427 AGTTTGAACCGAGACAAATTTAATATG 57.160 29.630 0.00 0.00 38.09 1.78
687 708 5.890424 TGCGAAGTAAATAAAAAGGGAGG 57.110 39.130 0.00 0.00 0.00 4.30
688 709 4.703093 TGCGAAGTAAATAAAAAGGGAGGG 59.297 41.667 0.00 0.00 0.00 4.30
689 710 4.097437 GCGAAGTAAATAAAAAGGGAGGGG 59.903 45.833 0.00 0.00 0.00 4.79
690 711 4.643334 CGAAGTAAATAAAAAGGGAGGGGG 59.357 45.833 0.00 0.00 0.00 5.40
691 712 5.586877 GAAGTAAATAAAAAGGGAGGGGGT 58.413 41.667 0.00 0.00 0.00 4.95
692 713 6.578841 CGAAGTAAATAAAAAGGGAGGGGGTA 60.579 42.308 0.00 0.00 0.00 3.69
709 730 3.488553 GGGGTACGTTAGCATGCATTTTC 60.489 47.826 21.98 4.49 0.00 2.29
956 986 0.635009 ACCCCGTCTCCTCTCCATTA 59.365 55.000 0.00 0.00 0.00 1.90
1027 1061 4.148825 GGAGGCAGTGATCGGCGT 62.149 66.667 6.85 0.00 35.70 5.68
1190 1233 1.595058 GGAGGAGGAGGAGGGGAAGA 61.595 65.000 0.00 0.00 0.00 2.87
1651 1696 1.974236 ACTAGAGTCCTGTGCTGCTTT 59.026 47.619 0.00 0.00 0.00 3.51
1737 1782 4.725556 TTTCCGAATGTTGACGAGAAAG 57.274 40.909 0.00 0.00 31.24 2.62
1868 1914 2.933056 GCCAAACAGTCTAGTCCTGAGC 60.933 54.545 15.85 10.26 34.04 4.26
2018 2065 5.065474 GGAAATCATAAATCCCGAACGTTCA 59.935 40.000 26.71 9.14 0.00 3.18
2024 2071 4.680171 AAATCCCGAACGTTCAGATTTC 57.320 40.909 31.23 9.87 36.14 2.17
2049 2096 1.386533 TGGCAACCCGAACGTTTTTA 58.613 45.000 0.46 0.00 0.00 1.52
2084 2131 2.252260 CGCGAGGTTGGCAAACAG 59.748 61.111 18.93 12.02 38.10 3.16
2085 2132 2.050077 GCGAGGTTGGCAAACAGC 60.050 61.111 18.93 18.06 44.65 4.40
2092 2139 1.933181 GGTTGGCAAACAGCAGTTTTC 59.067 47.619 11.10 0.00 45.32 2.29
2094 2141 2.582728 TGGCAAACAGCAGTTTTCTG 57.417 45.000 4.24 0.00 45.32 3.02
2095 2142 3.675775 GTTGGCAAACAGCAGTTTTCTGA 60.676 43.478 4.24 0.00 45.32 3.27
2096 2143 5.723578 GTTGGCAAACAGCAGTTTTCTGAC 61.724 45.833 4.24 0.00 45.32 3.51
2211 2262 8.889717 AGTGATATGATTAAAATCCGAACGTTT 58.110 29.630 0.46 0.00 34.50 3.60
2224 2275 2.931325 CGAACGTTTGGGATTTATCGGA 59.069 45.455 7.72 0.00 0.00 4.55
2249 2303 7.582719 AGTCCTAAATATAAAAGCCACCATGA 58.417 34.615 0.00 0.00 0.00 3.07
2315 2369 6.824196 TGAATAATGTTACGGGCAGTCAATTA 59.176 34.615 0.00 0.00 0.00 1.40
2323 2377 5.560966 ACGGGCAGTCAATTATTTTACTG 57.439 39.130 10.98 10.98 39.19 2.74
2410 2472 0.373716 CTCGGTGCGAACATAAAGCC 59.626 55.000 0.00 0.00 34.74 4.35
2795 2927 4.698304 CCGAAGAAACTTTACATAAGCCCA 59.302 41.667 0.00 0.00 0.00 5.36
3402 5154 1.825090 TTGTGATTGCGCCTTCTGAT 58.175 45.000 4.18 0.00 0.00 2.90
3582 5357 5.007823 ACATCGTCTAATACTGTCTTCGAGG 59.992 44.000 0.00 0.00 34.83 4.63
3753 5587 0.625849 CCCCACTTATGCCAAGAGGT 59.374 55.000 9.67 0.00 37.19 3.85
3789 5623 1.271656 GCCTCTCTGCATTGCACTTTT 59.728 47.619 7.38 0.00 33.79 2.27
3804 5638 4.015872 CACTTTTGCAGGGGTAAGACTA 57.984 45.455 0.00 0.00 0.00 2.59
3817 5651 7.513091 CAGGGGTAAGACTAGGTTCCTATAATT 59.487 40.741 0.00 0.00 0.00 1.40
3837 5671 4.675303 TCCCCAGACCCCACCCTG 62.675 72.222 0.00 0.00 0.00 4.45
3888 5722 7.782049 TGTCCTGTCCTTTATAGTAATGACTG 58.218 38.462 0.00 0.00 36.28 3.51
4357 6191 4.826733 TGTACAATCTTCAGGTGCAAATGT 59.173 37.500 0.00 0.00 0.00 2.71
4437 6271 0.104620 ACTATCCCCGCCCATTAGGT 60.105 55.000 0.00 0.00 38.26 3.08
4543 6382 2.371841 ACAAGAGTAGGCCATGTGTTGA 59.628 45.455 5.01 0.00 0.00 3.18
4580 6431 9.883142 AGAGAAACTTGTGATCTTTATAGGAAG 57.117 33.333 0.00 0.00 0.00 3.46
4788 6642 4.439153 CCGTAATTGCAGCATCAGTTTCAT 60.439 41.667 0.00 0.00 0.00 2.57
4804 6658 8.213518 TCAGTTTCATAAAGGATAGCAACATC 57.786 34.615 0.00 0.00 0.00 3.06
4817 6673 3.233507 AGCAACATCCTCACCATTGTTT 58.766 40.909 0.00 0.00 30.23 2.83
4818 6674 3.642848 AGCAACATCCTCACCATTGTTTT 59.357 39.130 0.00 0.00 30.23 2.43
4819 6675 3.742369 GCAACATCCTCACCATTGTTTTG 59.258 43.478 0.00 0.00 30.23 2.44
4820 6676 4.740334 GCAACATCCTCACCATTGTTTTGT 60.740 41.667 0.00 0.00 30.23 2.83
4833 6689 3.883830 TGTTTTGTTGCATGGAAGTGT 57.116 38.095 0.00 0.00 0.00 3.55
5166 7097 2.354003 CCAATCCACATTTGGCAGGTTC 60.354 50.000 0.00 0.00 43.56 3.62
5170 7101 0.387622 CACATTTGGCAGGTTCGCAG 60.388 55.000 0.00 0.00 0.00 5.18
5178 7109 0.235926 GCAGGTTCGCAGTCTGTTTC 59.764 55.000 0.93 0.00 0.00 2.78
5324 7567 7.500559 ACAAAAGAGAATGAAGCACTAAACTCT 59.499 33.333 0.00 0.00 35.44 3.24
5330 7573 6.939163 AGAATGAAGCACTAAACTCTGTTCAT 59.061 34.615 0.00 0.00 35.25 2.57
5413 7656 3.324108 GTTCCGGGGGCCACTGTA 61.324 66.667 14.25 0.00 0.00 2.74
5536 7779 2.615227 ATCCTGCACCGGAATCCAGC 62.615 60.000 9.46 2.43 36.49 4.85
5578 7821 2.164422 GGAAGAAACAAGCCCTGCATAC 59.836 50.000 0.00 0.00 0.00 2.39
5664 7907 8.586879 TCAGGATCATGAGTATAGATACAAGG 57.413 38.462 5.84 0.00 35.74 3.61
5696 7940 5.184711 AGACGTTACTAGTAGGAACCTCAG 58.815 45.833 17.92 7.78 0.00 3.35
5738 7982 1.152860 TTGCCGCCAGTGGAGAAAA 60.153 52.632 15.20 4.69 0.00 2.29
5739 7983 0.539438 TTGCCGCCAGTGGAGAAAAT 60.539 50.000 15.20 0.00 0.00 1.82
5740 7984 1.243342 TGCCGCCAGTGGAGAAAATG 61.243 55.000 15.20 0.00 0.00 2.32
5741 7985 1.508088 CCGCCAGTGGAGAAAATGC 59.492 57.895 15.20 0.00 0.00 3.56
5742 7986 0.962356 CCGCCAGTGGAGAAAATGCT 60.962 55.000 15.20 0.00 0.00 3.79
5743 7987 0.169672 CGCCAGTGGAGAAAATGCTG 59.830 55.000 15.20 0.00 0.00 4.41
5744 7988 1.538047 GCCAGTGGAGAAAATGCTGA 58.462 50.000 15.20 0.00 0.00 4.26
5751 8019 1.734465 GGAGAAAATGCTGACCGAGTG 59.266 52.381 0.00 0.00 0.00 3.51
5758 8026 2.605837 TGCTGACCGAGTGTAAAACA 57.394 45.000 0.00 0.00 0.00 2.83
5767 8035 3.560068 CCGAGTGTAAAACAAAGCTCTGT 59.440 43.478 0.00 0.00 0.00 3.41
5775 8043 0.109342 ACAAAGCTCTGTGTCTGGGG 59.891 55.000 0.00 0.00 0.00 4.96
5781 8049 0.542938 CTCTGTGTCTGGGGTCTGGA 60.543 60.000 0.00 0.00 0.00 3.86
5825 8093 6.071051 TGTGCTGGTTCAGTATAATGTACAGA 60.071 38.462 18.34 0.00 33.43 3.41
5831 8099 8.726988 TGGTTCAGTATAATGTACAGAAAAAGC 58.273 33.333 11.28 1.91 0.00 3.51
5896 8164 2.112475 CGTAGCTCTCTCGATGTTGG 57.888 55.000 0.00 0.00 0.00 3.77
5897 8165 1.268794 CGTAGCTCTCTCGATGTTGGG 60.269 57.143 0.00 0.00 0.00 4.12
5898 8166 0.747255 TAGCTCTCTCGATGTTGGGC 59.253 55.000 0.00 0.00 0.00 5.36
5904 8176 0.534873 TCTCGATGTTGGGCATTCGA 59.465 50.000 0.00 0.00 38.06 3.71
5916 8188 1.027357 GCATTCGATTGGCCTGTGAT 58.973 50.000 3.32 0.00 0.00 3.06
5917 8189 1.406539 GCATTCGATTGGCCTGTGATT 59.593 47.619 3.32 0.00 0.00 2.57
5918 8190 2.797087 GCATTCGATTGGCCTGTGATTG 60.797 50.000 3.32 5.01 0.00 2.67
5946 8219 1.651987 GCTTGCGTACCTATTCTGCA 58.348 50.000 0.00 0.00 0.00 4.41
6009 8282 2.609350 GCTCTCTCAGCTATGCTATGC 58.391 52.381 0.00 0.00 45.83 3.14
6010 8283 2.029200 GCTCTCTCAGCTATGCTATGCA 60.029 50.000 0.00 0.00 45.83 3.96
6011 8284 3.840468 CTCTCTCAGCTATGCTATGCAG 58.160 50.000 0.00 0.00 43.65 4.41
6012 8285 3.494332 TCTCTCAGCTATGCTATGCAGA 58.506 45.455 0.00 0.00 43.65 4.26
6013 8286 3.893813 TCTCTCAGCTATGCTATGCAGAA 59.106 43.478 0.00 0.00 43.65 3.02
6014 8287 4.022155 TCTCTCAGCTATGCTATGCAGAAG 60.022 45.833 0.00 0.00 43.65 2.85
6015 8288 3.640498 TCTCAGCTATGCTATGCAGAAGT 59.360 43.478 0.00 0.00 43.65 3.01
6016 8289 4.829492 TCTCAGCTATGCTATGCAGAAGTA 59.171 41.667 0.00 0.00 43.65 2.24
6022 8295 7.439356 CAGCTATGCTATGCAGAAGTAAAGTAA 59.561 37.037 0.00 0.00 43.65 2.24
6023 8296 7.439655 AGCTATGCTATGCAGAAGTAAAGTAAC 59.560 37.037 0.00 0.00 43.65 2.50
6027 8300 6.371548 TGCTATGCAGAAGTAAAGTAACCTTG 59.628 38.462 0.00 0.00 33.32 3.61
6052 8325 1.695597 CCAGCCCCTCCTGATTCCT 60.696 63.158 0.00 0.00 34.77 3.36
6093 8368 1.134220 TCTCGTGTGTTGCCTTTTCCT 60.134 47.619 0.00 0.00 0.00 3.36
6094 8369 1.676006 CTCGTGTGTTGCCTTTTCCTT 59.324 47.619 0.00 0.00 0.00 3.36
6122 8397 6.820470 TTTTGTTTTTGAAGAACGCCATAG 57.180 33.333 0.00 0.00 0.00 2.23
6123 8398 4.497473 TGTTTTTGAAGAACGCCATAGG 57.503 40.909 0.00 0.00 0.00 2.57
6124 8399 3.886505 TGTTTTTGAAGAACGCCATAGGT 59.113 39.130 0.00 0.00 0.00 3.08
6125 8400 4.339814 TGTTTTTGAAGAACGCCATAGGTT 59.660 37.500 0.00 0.00 0.00 3.50
6126 8401 4.759516 TTTTGAAGAACGCCATAGGTTC 57.240 40.909 0.00 0.00 43.15 3.62
6127 8402 2.004583 TGAAGAACGCCATAGGTTCG 57.995 50.000 0.00 0.00 46.40 3.95
6128 8403 1.546923 TGAAGAACGCCATAGGTTCGA 59.453 47.619 0.00 0.00 46.40 3.71
6129 8404 2.167693 TGAAGAACGCCATAGGTTCGAT 59.832 45.455 0.00 0.00 46.40 3.59
6130 8405 2.510768 AGAACGCCATAGGTTCGATC 57.489 50.000 0.00 0.00 46.40 3.69
6131 8406 2.032620 AGAACGCCATAGGTTCGATCT 58.967 47.619 0.00 0.00 46.40 2.75
6132 8407 2.128035 GAACGCCATAGGTTCGATCTG 58.872 52.381 0.00 0.00 35.00 2.90
6133 8408 0.389391 ACGCCATAGGTTCGATCTGG 59.611 55.000 0.00 0.00 0.00 3.86
6134 8409 2.919971 GCCATAGGTTCGATCTGGC 58.080 57.895 8.86 8.86 44.91 4.85
6135 8410 0.603975 GCCATAGGTTCGATCTGGCC 60.604 60.000 12.12 0.00 45.26 5.36
6136 8411 1.051812 CCATAGGTTCGATCTGGCCT 58.948 55.000 3.32 4.62 35.28 5.19
6137 8412 1.001406 CCATAGGTTCGATCTGGCCTC 59.999 57.143 3.32 0.00 32.90 4.70
6138 8413 1.001406 CATAGGTTCGATCTGGCCTCC 59.999 57.143 3.32 0.00 32.90 4.30
6139 8414 0.759436 TAGGTTCGATCTGGCCTCCC 60.759 60.000 3.32 0.00 32.90 4.30
6140 8415 2.066999 GGTTCGATCTGGCCTCCCT 61.067 63.158 3.32 0.00 0.00 4.20
6141 8416 1.627297 GGTTCGATCTGGCCTCCCTT 61.627 60.000 3.32 0.00 0.00 3.95
6142 8417 1.120530 GTTCGATCTGGCCTCCCTTA 58.879 55.000 3.32 0.00 0.00 2.69
6143 8418 1.694696 GTTCGATCTGGCCTCCCTTAT 59.305 52.381 3.32 0.00 0.00 1.73
6144 8419 1.342074 TCGATCTGGCCTCCCTTATG 58.658 55.000 3.32 0.00 0.00 1.90
6145 8420 1.051812 CGATCTGGCCTCCCTTATGT 58.948 55.000 3.32 0.00 0.00 2.29
6146 8421 1.001406 CGATCTGGCCTCCCTTATGTC 59.999 57.143 3.32 0.00 0.00 3.06
6147 8422 2.050144 GATCTGGCCTCCCTTATGTCA 58.950 52.381 3.32 0.00 0.00 3.58
6148 8423 1.204146 TCTGGCCTCCCTTATGTCAC 58.796 55.000 3.32 0.00 0.00 3.67
6149 8424 0.181350 CTGGCCTCCCTTATGTCACC 59.819 60.000 3.32 0.00 0.00 4.02
6150 8425 1.146263 GGCCTCCCTTATGTCACCG 59.854 63.158 0.00 0.00 0.00 4.94
6151 8426 1.623542 GGCCTCCCTTATGTCACCGT 61.624 60.000 0.00 0.00 0.00 4.83
6152 8427 0.252197 GCCTCCCTTATGTCACCGTT 59.748 55.000 0.00 0.00 0.00 4.44
6153 8428 1.483415 GCCTCCCTTATGTCACCGTTA 59.517 52.381 0.00 0.00 0.00 3.18
6154 8429 2.483188 GCCTCCCTTATGTCACCGTTAG 60.483 54.545 0.00 0.00 0.00 2.34
6155 8430 2.102588 CCTCCCTTATGTCACCGTTAGG 59.897 54.545 0.00 0.00 45.13 2.69
6156 8431 3.028850 CTCCCTTATGTCACCGTTAGGA 58.971 50.000 0.00 0.00 41.02 2.94
6157 8432 3.028850 TCCCTTATGTCACCGTTAGGAG 58.971 50.000 0.00 0.00 41.02 3.69
6158 8433 2.483188 CCCTTATGTCACCGTTAGGAGC 60.483 54.545 0.00 0.00 41.02 4.70
6159 8434 2.167693 CCTTATGTCACCGTTAGGAGCA 59.832 50.000 0.00 0.00 41.02 4.26
6160 8435 3.448686 CTTATGTCACCGTTAGGAGCAG 58.551 50.000 0.00 0.00 41.02 4.24
6161 8436 0.537188 ATGTCACCGTTAGGAGCAGG 59.463 55.000 0.00 0.00 41.02 4.85
6162 8437 1.218316 GTCACCGTTAGGAGCAGGG 59.782 63.158 0.00 0.00 41.02 4.45
6163 8438 1.077805 TCACCGTTAGGAGCAGGGA 59.922 57.895 0.00 0.00 41.02 4.20
6164 8439 0.970937 TCACCGTTAGGAGCAGGGAG 60.971 60.000 0.00 0.00 41.02 4.30
6165 8440 0.970937 CACCGTTAGGAGCAGGGAGA 60.971 60.000 0.00 0.00 41.02 3.71
6166 8441 0.971447 ACCGTTAGGAGCAGGGAGAC 60.971 60.000 0.00 0.00 41.02 3.36
6167 8442 0.684805 CCGTTAGGAGCAGGGAGACT 60.685 60.000 0.00 0.00 41.02 3.24
6168 8443 1.187087 CGTTAGGAGCAGGGAGACTT 58.813 55.000 0.00 0.00 0.00 3.01
6169 8444 1.134965 CGTTAGGAGCAGGGAGACTTG 60.135 57.143 0.00 0.00 41.09 3.16
6170 8445 2.180276 GTTAGGAGCAGGGAGACTTGA 58.820 52.381 0.00 0.00 40.48 3.02
6171 8446 1.853963 TAGGAGCAGGGAGACTTGAC 58.146 55.000 0.00 0.00 40.48 3.18
6172 8447 1.216710 GGAGCAGGGAGACTTGACG 59.783 63.158 0.00 0.00 40.48 4.35
6173 8448 1.251527 GGAGCAGGGAGACTTGACGA 61.252 60.000 0.00 0.00 40.48 4.20
6174 8449 0.172352 GAGCAGGGAGACTTGACGAG 59.828 60.000 0.00 0.00 40.48 4.18
6175 8450 1.216710 GCAGGGAGACTTGACGAGG 59.783 63.158 0.00 0.00 40.48 4.63
6176 8451 1.216710 CAGGGAGACTTGACGAGGC 59.783 63.158 0.00 0.00 40.48 4.70
6177 8452 1.228894 AGGGAGACTTGACGAGGCA 60.229 57.895 0.00 0.00 35.01 4.75
6178 8453 0.832135 AGGGAGACTTGACGAGGCAA 60.832 55.000 0.00 0.00 35.01 4.52
6179 8454 0.034896 GGGAGACTTGACGAGGCAAA 59.965 55.000 0.00 0.00 35.01 3.68
6180 8455 1.433534 GGAGACTTGACGAGGCAAAG 58.566 55.000 0.00 0.00 35.01 2.77
6181 8456 1.433534 GAGACTTGACGAGGCAAAGG 58.566 55.000 0.00 0.00 35.01 3.11
6182 8457 0.603975 AGACTTGACGAGGCAAAGGC 60.604 55.000 0.00 0.00 35.01 4.35
6228 8503 4.110493 GGAGACGGCGAATTGGAG 57.890 61.111 16.62 0.00 0.00 3.86
6229 8504 1.515954 GGAGACGGCGAATTGGAGA 59.484 57.895 16.62 0.00 0.00 3.71
6230 8505 0.528684 GGAGACGGCGAATTGGAGAG 60.529 60.000 16.62 0.00 0.00 3.20
6231 8506 1.148759 GAGACGGCGAATTGGAGAGC 61.149 60.000 16.62 0.00 0.00 4.09
6232 8507 2.509336 ACGGCGAATTGGAGAGCG 60.509 61.111 16.62 0.00 0.00 5.03
6238 8513 1.606606 CGAATTGGAGAGCGCAAAAC 58.393 50.000 11.47 0.00 0.00 2.43
6240 8515 0.240945 AATTGGAGAGCGCAAAACGG 59.759 50.000 11.47 0.00 43.93 4.44
6241 8516 0.605319 ATTGGAGAGCGCAAAACGGA 60.605 50.000 11.47 0.00 43.93 4.69
6242 8517 1.227999 TTGGAGAGCGCAAAACGGAG 61.228 55.000 11.47 0.00 43.93 4.63
6243 8518 1.374252 GGAGAGCGCAAAACGGAGA 60.374 57.895 11.47 0.00 43.93 3.71
6244 8519 1.355066 GGAGAGCGCAAAACGGAGAG 61.355 60.000 11.47 0.00 43.93 3.20
6245 8520 0.388649 GAGAGCGCAAAACGGAGAGA 60.389 55.000 11.47 0.00 43.93 3.10
6246 8521 0.389166 AGAGCGCAAAACGGAGAGAG 60.389 55.000 11.47 0.00 43.93 3.20
6247 8522 0.388649 GAGCGCAAAACGGAGAGAGA 60.389 55.000 11.47 0.00 43.93 3.10
6248 8523 0.389166 AGCGCAAAACGGAGAGAGAG 60.389 55.000 11.47 0.00 43.93 3.20
6249 8524 1.355066 GCGCAAAACGGAGAGAGAGG 61.355 60.000 0.30 0.00 43.93 3.69
6250 8525 0.737715 CGCAAAACGGAGAGAGAGGG 60.738 60.000 0.00 0.00 38.44 4.30
6251 8526 0.321996 GCAAAACGGAGAGAGAGGGT 59.678 55.000 0.00 0.00 0.00 4.34
6252 8527 1.673329 GCAAAACGGAGAGAGAGGGTC 60.673 57.143 0.00 0.00 0.00 4.46
6253 8528 1.896465 CAAAACGGAGAGAGAGGGTCT 59.104 52.381 0.00 0.00 38.71 3.85
6263 8538 2.797177 GAGAGGGTCTCTTTTGCCAT 57.203 50.000 0.00 0.00 41.35 4.40
6264 8539 2.637947 GAGAGGGTCTCTTTTGCCATC 58.362 52.381 0.00 0.00 41.35 3.51
6265 8540 2.238395 GAGAGGGTCTCTTTTGCCATCT 59.762 50.000 0.00 0.00 44.75 2.90
6266 8541 2.646798 AGAGGGTCTCTTTTGCCATCTT 59.353 45.455 0.00 0.00 40.01 2.40
6267 8542 3.846588 AGAGGGTCTCTTTTGCCATCTTA 59.153 43.478 0.00 0.00 40.01 2.10
6268 8543 3.942115 GAGGGTCTCTTTTGCCATCTTAC 59.058 47.826 0.00 0.00 31.21 2.34
6269 8544 3.330701 AGGGTCTCTTTTGCCATCTTACA 59.669 43.478 0.00 0.00 0.00 2.41
6270 8545 3.691609 GGGTCTCTTTTGCCATCTTACAG 59.308 47.826 0.00 0.00 0.00 2.74
6271 8546 3.691609 GGTCTCTTTTGCCATCTTACAGG 59.308 47.826 0.00 0.00 0.00 4.00
6276 8551 2.203209 GCCATCTTACAGGCGGGG 60.203 66.667 0.00 0.00 41.70 5.73
6277 8552 2.203209 CCATCTTACAGGCGGGGC 60.203 66.667 0.00 0.00 0.00 5.80
6289 8564 3.518068 CGGGGCCCGCTTGAATTC 61.518 66.667 34.87 0.00 41.17 2.17
6290 8565 3.147595 GGGGCCCGCTTGAATTCC 61.148 66.667 17.79 0.00 0.00 3.01
6291 8566 3.147595 GGGCCCGCTTGAATTCCC 61.148 66.667 5.69 0.00 0.00 3.97
6292 8567 3.518068 GGCCCGCTTGAATTCCCG 61.518 66.667 2.27 3.31 0.00 5.14
6293 8568 3.518068 GCCCGCTTGAATTCCCGG 61.518 66.667 17.45 17.45 40.39 5.73
6294 8569 2.045340 CCCGCTTGAATTCCCGGT 60.045 61.111 20.67 0.00 39.12 5.28
6295 8570 1.677633 CCCGCTTGAATTCCCGGTT 60.678 57.895 20.67 0.00 39.12 4.44
6296 8571 1.248101 CCCGCTTGAATTCCCGGTTT 61.248 55.000 20.67 0.00 39.12 3.27
6297 8572 0.601057 CCGCTTGAATTCCCGGTTTT 59.399 50.000 16.60 0.00 36.18 2.43
6298 8573 1.668628 CCGCTTGAATTCCCGGTTTTG 60.669 52.381 16.60 0.00 36.18 2.44
6299 8574 1.428448 GCTTGAATTCCCGGTTTTGC 58.572 50.000 0.00 0.00 0.00 3.68
6300 8575 1.939381 GCTTGAATTCCCGGTTTTGCC 60.939 52.381 0.00 0.00 0.00 4.52
6301 8576 0.682292 TTGAATTCCCGGTTTTGCCC 59.318 50.000 0.00 0.00 0.00 5.36
6302 8577 1.188871 TGAATTCCCGGTTTTGCCCC 61.189 55.000 0.00 0.00 0.00 5.80
6303 8578 0.902984 GAATTCCCGGTTTTGCCCCT 60.903 55.000 0.00 0.00 0.00 4.79
6304 8579 1.191489 AATTCCCGGTTTTGCCCCTG 61.191 55.000 0.00 0.00 0.00 4.45
6305 8580 4.986708 TCCCGGTTTTGCCCCTGC 62.987 66.667 0.00 0.00 38.26 4.85
6308 8583 3.230245 CGGTTTTGCCCCTGCCAA 61.230 61.111 0.00 0.00 36.33 4.52
6309 8584 2.743060 GGTTTTGCCCCTGCCAAG 59.257 61.111 0.00 0.00 36.33 3.61
6310 8585 2.140138 GGTTTTGCCCCTGCCAAGT 61.140 57.895 0.00 0.00 36.33 3.16
6311 8586 1.367471 GTTTTGCCCCTGCCAAGTC 59.633 57.895 0.00 0.00 36.33 3.01
6312 8587 1.075674 TTTTGCCCCTGCCAAGTCA 60.076 52.632 0.00 0.00 36.33 3.41
6313 8588 0.689080 TTTTGCCCCTGCCAAGTCAA 60.689 50.000 0.00 0.00 36.33 3.18
6314 8589 0.471591 TTTGCCCCTGCCAAGTCAAT 60.472 50.000 0.00 0.00 36.33 2.57
6315 8590 0.471591 TTGCCCCTGCCAAGTCAATT 60.472 50.000 0.00 0.00 36.33 2.32
6316 8591 1.186917 TGCCCCTGCCAAGTCAATTG 61.187 55.000 0.00 0.00 38.74 2.32
6317 8592 0.899717 GCCCCTGCCAAGTCAATTGA 60.900 55.000 3.38 3.38 41.83 2.57
6318 8593 0.890683 CCCCTGCCAAGTCAATTGAC 59.109 55.000 27.69 27.69 41.83 3.18
6319 8594 0.890683 CCCTGCCAAGTCAATTGACC 59.109 55.000 30.34 17.77 45.85 4.02
6320 8595 1.619654 CCTGCCAAGTCAATTGACCA 58.380 50.000 30.34 20.86 45.85 4.02
6321 8596 1.542915 CCTGCCAAGTCAATTGACCAG 59.457 52.381 30.34 26.92 45.85 4.00
6322 8597 1.542915 CTGCCAAGTCAATTGACCAGG 59.457 52.381 30.34 29.73 45.85 4.45
6323 8598 1.144708 TGCCAAGTCAATTGACCAGGA 59.855 47.619 34.09 22.96 45.85 3.86
6324 8599 1.815003 GCCAAGTCAATTGACCAGGAG 59.185 52.381 34.09 21.48 45.85 3.69
6325 8600 2.553028 GCCAAGTCAATTGACCAGGAGA 60.553 50.000 34.09 3.52 45.85 3.71
6326 8601 3.341823 CCAAGTCAATTGACCAGGAGAG 58.658 50.000 29.58 15.80 45.85 3.20
6327 8602 3.341823 CAAGTCAATTGACCAGGAGAGG 58.658 50.000 30.34 10.81 45.85 3.69
6328 8603 1.912043 AGTCAATTGACCAGGAGAGGG 59.088 52.381 30.34 0.00 45.85 4.30
6329 8604 1.909302 GTCAATTGACCAGGAGAGGGA 59.091 52.381 25.26 0.00 39.07 4.20
6330 8605 1.909302 TCAATTGACCAGGAGAGGGAC 59.091 52.381 3.38 0.00 0.00 4.46
6331 8606 0.905357 AATTGACCAGGAGAGGGACG 59.095 55.000 0.00 0.00 0.00 4.79
6332 8607 1.617947 ATTGACCAGGAGAGGGACGC 61.618 60.000 0.00 0.00 0.00 5.19
6333 8608 3.827898 GACCAGGAGAGGGACGCG 61.828 72.222 3.53 3.53 0.00 6.01
6334 8609 4.680537 ACCAGGAGAGGGACGCGT 62.681 66.667 13.85 13.85 0.00 6.01
6335 8610 3.382832 CCAGGAGAGGGACGCGTT 61.383 66.667 15.53 0.00 0.00 4.84
6336 8611 2.182030 CAGGAGAGGGACGCGTTC 59.818 66.667 15.53 12.55 0.00 3.95
6337 8612 3.441290 AGGAGAGGGACGCGTTCG 61.441 66.667 15.53 0.00 42.43 3.95
6347 8622 4.072088 CGCGTTCGTGTTCCCTGC 62.072 66.667 0.00 0.00 0.00 4.85
6348 8623 2.665185 GCGTTCGTGTTCCCTGCT 60.665 61.111 0.00 0.00 0.00 4.24
6349 8624 2.668280 GCGTTCGTGTTCCCTGCTC 61.668 63.158 0.00 0.00 0.00 4.26
6350 8625 1.006102 CGTTCGTGTTCCCTGCTCT 60.006 57.895 0.00 0.00 0.00 4.09
6351 8626 0.600255 CGTTCGTGTTCCCTGCTCTT 60.600 55.000 0.00 0.00 0.00 2.85
6352 8627 1.149148 GTTCGTGTTCCCTGCTCTTC 58.851 55.000 0.00 0.00 0.00 2.87
6353 8628 0.319555 TTCGTGTTCCCTGCTCTTCG 60.320 55.000 0.00 0.00 0.00 3.79
6354 8629 1.006102 CGTGTTCCCTGCTCTTCGT 60.006 57.895 0.00 0.00 0.00 3.85
6355 8630 1.009389 CGTGTTCCCTGCTCTTCGTC 61.009 60.000 0.00 0.00 0.00 4.20
6356 8631 1.009389 GTGTTCCCTGCTCTTCGTCG 61.009 60.000 0.00 0.00 0.00 5.12
6357 8632 1.176619 TGTTCCCTGCTCTTCGTCGA 61.177 55.000 0.00 0.00 0.00 4.20
6358 8633 0.733223 GTTCCCTGCTCTTCGTCGAC 60.733 60.000 5.18 5.18 0.00 4.20
6359 8634 2.196382 TTCCCTGCTCTTCGTCGACG 62.196 60.000 31.30 31.30 41.45 5.12
6360 8635 2.876645 CCTGCTCTTCGTCGACGC 60.877 66.667 32.19 18.40 39.60 5.19
6361 8636 2.876645 CTGCTCTTCGTCGACGCC 60.877 66.667 32.19 17.00 39.60 5.68
6362 8637 4.753877 TGCTCTTCGTCGACGCCG 62.754 66.667 32.19 23.52 39.60 6.46
6363 8638 4.456253 GCTCTTCGTCGACGCCGA 62.456 66.667 32.19 26.02 43.35 5.54
6385 8660 3.771160 GGGTCTCCACGGCGACAT 61.771 66.667 16.62 0.00 32.07 3.06
6386 8661 2.420568 GGGTCTCCACGGCGACATA 61.421 63.158 16.62 0.00 32.07 2.29
6387 8662 1.226888 GGTCTCCACGGCGACATAC 60.227 63.158 16.62 4.71 32.07 2.39
6388 8663 1.226888 GTCTCCACGGCGACATACC 60.227 63.158 16.62 0.00 30.95 2.73
6418 8693 2.762459 CGGATCCCTCCCGGTGAA 60.762 66.667 6.06 0.00 43.05 3.18
6419 8694 2.797278 CGGATCCCTCCCGGTGAAG 61.797 68.421 6.06 0.00 43.05 3.02
6420 8695 2.444256 GGATCCCTCCCGGTGAAGG 61.444 68.421 0.00 4.09 35.28 3.46
6421 8696 3.090532 ATCCCTCCCGGTGAAGGC 61.091 66.667 0.00 0.00 0.00 4.35
6424 8699 4.452733 CCTCCCGGTGAAGGCGAC 62.453 72.222 0.00 0.00 0.00 5.19
6425 8700 4.796231 CTCCCGGTGAAGGCGACG 62.796 72.222 0.00 0.00 0.00 5.12
6429 8704 4.351938 CGGTGAAGGCGACGGTGA 62.352 66.667 0.00 0.00 0.00 4.02
6430 8705 2.432628 GGTGAAGGCGACGGTGAG 60.433 66.667 0.00 0.00 0.00 3.51
6431 8706 2.338984 GTGAAGGCGACGGTGAGT 59.661 61.111 0.00 0.00 0.00 3.41
6432 8707 1.733399 GTGAAGGCGACGGTGAGTC 60.733 63.158 0.00 0.00 46.16 3.36
6440 8715 3.562397 GACGGTGAGTCTCCTCTCT 57.438 57.895 9.48 0.00 46.13 3.10
6441 8716 1.828979 GACGGTGAGTCTCCTCTCTT 58.171 55.000 9.48 0.00 46.13 2.85
6442 8717 1.741145 GACGGTGAGTCTCCTCTCTTC 59.259 57.143 9.48 0.00 46.13 2.87
6443 8718 1.353022 ACGGTGAGTCTCCTCTCTTCT 59.647 52.381 9.48 0.00 38.61 2.85
6444 8719 2.014128 CGGTGAGTCTCCTCTCTTCTC 58.986 57.143 9.48 0.00 38.61 2.87
6445 8720 2.375146 GGTGAGTCTCCTCTCTTCTCC 58.625 57.143 3.90 0.00 38.61 3.71
6446 8721 2.375146 GTGAGTCTCCTCTCTTCTCCC 58.625 57.143 0.00 0.00 38.61 4.30
6447 8722 1.286553 TGAGTCTCCTCTCTTCTCCCC 59.713 57.143 0.00 0.00 38.61 4.81
6448 8723 1.569072 GAGTCTCCTCTCTTCTCCCCT 59.431 57.143 0.00 0.00 34.69 4.79
6449 8724 1.569072 AGTCTCCTCTCTTCTCCCCTC 59.431 57.143 0.00 0.00 0.00 4.30
6450 8725 1.569072 GTCTCCTCTCTTCTCCCCTCT 59.431 57.143 0.00 0.00 0.00 3.69
6451 8726 2.024369 GTCTCCTCTCTTCTCCCCTCTT 60.024 54.545 0.00 0.00 0.00 2.85
6452 8727 2.243736 TCTCCTCTCTTCTCCCCTCTTC 59.756 54.545 0.00 0.00 0.00 2.87
6453 8728 1.064314 TCCTCTCTTCTCCCCTCTTCG 60.064 57.143 0.00 0.00 0.00 3.79
6454 8729 0.744281 CTCTCTTCTCCCCTCTTCGC 59.256 60.000 0.00 0.00 0.00 4.70
6455 8730 0.684805 TCTCTTCTCCCCTCTTCGCC 60.685 60.000 0.00 0.00 0.00 5.54
6456 8731 0.972983 CTCTTCTCCCCTCTTCGCCA 60.973 60.000 0.00 0.00 0.00 5.69
6457 8732 0.544357 TCTTCTCCCCTCTTCGCCAA 60.544 55.000 0.00 0.00 0.00 4.52
6458 8733 0.107945 CTTCTCCCCTCTTCGCCAAG 60.108 60.000 0.00 0.00 0.00 3.61
6459 8734 0.836400 TTCTCCCCTCTTCGCCAAGT 60.836 55.000 0.00 0.00 0.00 3.16
6460 8735 1.219393 CTCCCCTCTTCGCCAAGTC 59.781 63.158 0.00 0.00 0.00 3.01
6461 8736 2.245438 CTCCCCTCTTCGCCAAGTCC 62.245 65.000 0.00 0.00 0.00 3.85
6462 8737 2.269241 CCCTCTTCGCCAAGTCCC 59.731 66.667 0.00 0.00 0.00 4.46
6463 8738 2.269241 CCTCTTCGCCAAGTCCCC 59.731 66.667 0.00 0.00 0.00 4.81
6464 8739 2.592993 CCTCTTCGCCAAGTCCCCA 61.593 63.158 0.00 0.00 0.00 4.96
6465 8740 1.604378 CTCTTCGCCAAGTCCCCAT 59.396 57.895 0.00 0.00 0.00 4.00
6466 8741 0.745845 CTCTTCGCCAAGTCCCCATG 60.746 60.000 0.00 0.00 0.00 3.66
6467 8742 1.002134 CTTCGCCAAGTCCCCATGT 60.002 57.895 0.00 0.00 0.00 3.21
6468 8743 1.002624 TTCGCCAAGTCCCCATGTC 60.003 57.895 0.00 0.00 0.00 3.06
6469 8744 2.438434 CGCCAAGTCCCCATGTCC 60.438 66.667 0.00 0.00 0.00 4.02
6470 8745 2.043953 GCCAAGTCCCCATGTCCC 60.044 66.667 0.00 0.00 0.00 4.46
6471 8746 2.917897 GCCAAGTCCCCATGTCCCA 61.918 63.158 0.00 0.00 0.00 4.37
6472 8747 1.000896 CCAAGTCCCCATGTCCCAC 60.001 63.158 0.00 0.00 0.00 4.61
6473 8748 1.377202 CAAGTCCCCATGTCCCACG 60.377 63.158 0.00 0.00 0.00 4.94
6474 8749 2.602676 AAGTCCCCATGTCCCACGG 61.603 63.158 0.00 0.00 0.00 4.94
6475 8750 4.796495 GTCCCCATGTCCCACGGC 62.796 72.222 0.00 0.00 0.00 5.68
6491 8766 3.979739 GCGGCGACCTAGGGCTAG 61.980 72.222 14.26 4.70 0.00 3.42
6501 8776 2.047830 CCTAGGGCTAGGTTTAGGTGG 58.952 57.143 0.00 0.00 45.93 4.61
6502 8777 2.628829 CCTAGGGCTAGGTTTAGGTGGT 60.629 54.545 0.00 0.00 45.93 4.16
6503 8778 1.581223 AGGGCTAGGTTTAGGTGGTC 58.419 55.000 0.00 0.00 0.00 4.02
6504 8779 0.177373 GGGCTAGGTTTAGGTGGTCG 59.823 60.000 0.00 0.00 0.00 4.79
6505 8780 0.461516 GGCTAGGTTTAGGTGGTCGC 60.462 60.000 0.00 0.00 0.00 5.19
6506 8781 0.461516 GCTAGGTTTAGGTGGTCGCC 60.462 60.000 0.00 0.00 0.00 5.54
6507 8782 0.179119 CTAGGTTTAGGTGGTCGCCG 60.179 60.000 0.00 0.00 0.00 6.46
6508 8783 2.229690 TAGGTTTAGGTGGTCGCCGC 62.230 60.000 1.37 1.37 0.00 6.53
6573 8848 4.803426 CTGGCCGTCTCCTGCGTC 62.803 72.222 0.00 0.00 0.00 5.19
6576 8851 4.500116 GCCGTCTCCTGCGTCCTC 62.500 72.222 0.00 0.00 0.00 3.71
6577 8852 4.180946 CCGTCTCCTGCGTCCTCG 62.181 72.222 0.00 0.00 40.37 4.63
6578 8853 4.180946 CGTCTCCTGCGTCCTCGG 62.181 72.222 0.00 0.00 37.56 4.63
6579 8854 4.500116 GTCTCCTGCGTCCTCGGC 62.500 72.222 0.00 0.00 37.56 5.54
6604 8879 4.452733 CCGCCCCTTGGTCGTCTC 62.453 72.222 0.00 0.00 31.78 3.36
6605 8880 4.452733 CGCCCCTTGGTCGTCTCC 62.453 72.222 0.00 0.00 0.00 3.71
6606 8881 4.097361 GCCCCTTGGTCGTCTCCC 62.097 72.222 0.00 0.00 0.00 4.30
6607 8882 3.771160 CCCCTTGGTCGTCTCCCG 61.771 72.222 0.00 0.00 38.13 5.14
6608 8883 4.452733 CCCTTGGTCGTCTCCCGC 62.453 72.222 0.00 0.00 36.19 6.13
6609 8884 4.796231 CCTTGGTCGTCTCCCGCG 62.796 72.222 0.00 0.00 36.19 6.46
6610 8885 4.052229 CTTGGTCGTCTCCCGCGT 62.052 66.667 4.92 0.00 36.19 6.01
6611 8886 3.966026 CTTGGTCGTCTCCCGCGTC 62.966 68.421 4.92 0.00 36.19 5.19
6614 8889 4.773117 GTCGTCTCCCGCGTCCAC 62.773 72.222 4.92 0.00 36.19 4.02
6617 8892 4.773117 GTCTCCCGCGTCCACGAC 62.773 72.222 4.92 0.29 43.02 4.34
6619 8894 4.129737 CTCCCGCGTCCACGACAT 62.130 66.667 4.92 0.00 43.02 3.06
6620 8895 4.429212 TCCCGCGTCCACGACATG 62.429 66.667 4.92 0.00 43.02 3.21
6629 8904 3.490759 CACGACATGGACGCTGCC 61.491 66.667 12.98 0.00 0.00 4.85
6630 8905 4.760047 ACGACATGGACGCTGCCC 62.760 66.667 12.98 0.00 0.00 5.36
6632 8907 4.101448 GACATGGACGCTGCCCCT 62.101 66.667 0.00 0.00 0.00 4.79
6633 8908 4.415150 ACATGGACGCTGCCCCTG 62.415 66.667 0.00 3.62 0.00 4.45
6647 8922 3.749064 CCTGGCTTGCTGCTGCTG 61.749 66.667 17.00 10.41 42.39 4.41
6648 8923 4.421479 CTGGCTTGCTGCTGCTGC 62.421 66.667 22.51 22.51 42.39 5.25
6649 8924 4.968766 TGGCTTGCTGCTGCTGCT 62.969 61.111 27.67 0.00 42.39 4.24
6650 8925 3.681835 GGCTTGCTGCTGCTGCTT 61.682 61.111 27.67 0.00 42.39 3.91
6651 8926 2.430921 GCTTGCTGCTGCTGCTTG 60.431 61.111 27.67 20.94 40.48 4.01
6652 8927 3.039988 CTTGCTGCTGCTGCTTGT 58.960 55.556 27.67 0.00 40.48 3.16
6653 8928 1.371758 CTTGCTGCTGCTGCTTGTG 60.372 57.895 27.67 13.68 40.48 3.33
6654 8929 2.749110 CTTGCTGCTGCTGCTTGTGG 62.749 60.000 27.67 12.19 40.48 4.17
6655 8930 4.052229 GCTGCTGCTGCTTGTGGG 62.052 66.667 22.10 1.89 40.48 4.61
6656 8931 3.371063 CTGCTGCTGCTTGTGGGG 61.371 66.667 17.00 0.00 40.48 4.96
6657 8932 3.855503 CTGCTGCTGCTTGTGGGGA 62.856 63.158 17.00 0.00 40.48 4.81
6658 8933 3.060615 GCTGCTGCTTGTGGGGAG 61.061 66.667 8.53 0.00 36.03 4.30
6663 8938 4.100479 TGCTTGTGGGGAGCAATG 57.900 55.556 0.00 0.00 46.35 2.82
6664 8939 1.607178 TGCTTGTGGGGAGCAATGG 60.607 57.895 0.00 0.00 46.35 3.16
6665 8940 2.353610 GCTTGTGGGGAGCAATGGG 61.354 63.158 0.00 0.00 39.89 4.00
6666 8941 1.683365 CTTGTGGGGAGCAATGGGG 60.683 63.158 0.00 0.00 0.00 4.96
6667 8942 2.153898 CTTGTGGGGAGCAATGGGGA 62.154 60.000 0.00 0.00 0.00 4.81
6668 8943 2.153898 TTGTGGGGAGCAATGGGGAG 62.154 60.000 0.00 0.00 0.00 4.30
6669 8944 3.743017 TGGGGAGCAATGGGGAGC 61.743 66.667 0.00 0.00 0.00 4.70
6670 8945 3.743017 GGGGAGCAATGGGGAGCA 61.743 66.667 0.00 0.00 0.00 4.26
6671 8946 2.123982 GGGAGCAATGGGGAGCAG 60.124 66.667 0.00 0.00 0.00 4.24
6672 8947 2.832201 GGAGCAATGGGGAGCAGC 60.832 66.667 0.00 0.00 0.00 5.25
6673 8948 2.044650 GAGCAATGGGGAGCAGCA 60.045 61.111 0.00 0.00 0.00 4.41
6674 8949 1.679977 GAGCAATGGGGAGCAGCAA 60.680 57.895 0.00 0.00 0.00 3.91
6675 8950 1.664321 GAGCAATGGGGAGCAGCAAG 61.664 60.000 0.00 0.00 0.00 4.01
6676 8951 2.890371 CAATGGGGAGCAGCAAGC 59.110 61.111 0.00 0.00 46.19 4.01
6705 8980 4.079850 CGCCAGAGAGCTGCAGGT 62.080 66.667 20.31 20.31 40.91 4.00
6706 8981 2.436292 GCCAGAGAGCTGCAGGTG 60.436 66.667 25.60 9.62 40.91 4.00
6707 8982 2.436292 CCAGAGAGCTGCAGGTGC 60.436 66.667 25.60 14.96 40.91 5.01
6708 8983 2.814341 CAGAGAGCTGCAGGTGCG 60.814 66.667 25.60 4.58 45.83 5.34
6726 9001 2.126965 GCAACGAGCAGCAGCAAG 60.127 61.111 3.17 0.00 45.49 4.01
6727 9002 2.559840 CAACGAGCAGCAGCAAGG 59.440 61.111 3.17 0.00 45.49 3.61
6728 9003 2.111878 AACGAGCAGCAGCAAGGT 59.888 55.556 3.17 0.00 45.49 3.50
6755 9030 3.730761 GGGAGCAGCAGCAACGTG 61.731 66.667 3.17 0.00 45.49 4.49
6756 9031 4.395583 GGAGCAGCAGCAACGTGC 62.396 66.667 3.17 0.00 45.49 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 8.503458 AGATTTGGTGTCAGATTCTTTAGATG 57.497 34.615 0.00 0.00 0.00 2.90
12 13 5.474876 GGTGAGATTTGGTGTCAGATTCTTT 59.525 40.000 0.00 0.00 29.63 2.52
42 43 0.997196 GGGTTTCTCGTCGTGCATAC 59.003 55.000 0.00 0.00 0.00 2.39
45 46 0.675083 TTAGGGTTTCTCGTCGTGCA 59.325 50.000 0.00 0.00 0.00 4.57
50 51 2.274920 CGAGGTTAGGGTTTCTCGTC 57.725 55.000 0.00 0.00 42.61 4.20
101 102 1.201880 GGACGGATTATACGGAGCTCC 59.798 57.143 23.79 23.79 35.23 4.70
118 119 0.318107 TCAAGTTCGTTCGTCGGGAC 60.318 55.000 0.00 0.00 40.32 4.46
125 126 2.094700 TGATCCTCCTCAAGTTCGTTCG 60.095 50.000 0.00 0.00 0.00 3.95
146 147 2.621998 TCGAGTCAGTCTTTCGGTCTTT 59.378 45.455 0.00 0.00 35.21 2.52
147 148 2.228059 TCGAGTCAGTCTTTCGGTCTT 58.772 47.619 0.00 0.00 35.21 3.01
150 151 2.228059 TCTTCGAGTCAGTCTTTCGGT 58.772 47.619 0.00 0.00 35.21 4.69
152 153 2.659279 GCTTCTTCGAGTCAGTCTTTCG 59.341 50.000 0.00 0.00 35.76 3.46
164 165 1.516386 GATGGCGACGCTTCTTCGA 60.516 57.895 20.77 0.00 38.85 3.71
165 166 2.517450 GGATGGCGACGCTTCTTCG 61.517 63.158 20.77 0.00 39.56 3.79
184 188 4.162690 GAAGGGTGGCGCTCGGAT 62.163 66.667 7.64 0.00 0.00 4.18
188 192 2.125350 CTCAGAAGGGTGGCGCTC 60.125 66.667 7.64 0.23 0.00 5.03
189 193 1.557269 ATTCTCAGAAGGGTGGCGCT 61.557 55.000 7.64 0.00 0.00 5.92
190 194 0.678048 AATTCTCAGAAGGGTGGCGC 60.678 55.000 0.00 0.00 0.00 6.53
191 195 2.691409 TAATTCTCAGAAGGGTGGCG 57.309 50.000 0.00 0.00 0.00 5.69
192 196 5.163509 GGATTTTAATTCTCAGAAGGGTGGC 60.164 44.000 0.00 0.00 0.00 5.01
193 197 6.190587 AGGATTTTAATTCTCAGAAGGGTGG 58.809 40.000 0.00 0.00 0.00 4.61
195 199 7.347252 GGTAGGATTTTAATTCTCAGAAGGGT 58.653 38.462 0.00 0.00 0.00 4.34
196 200 6.773200 GGGTAGGATTTTAATTCTCAGAAGGG 59.227 42.308 0.00 0.00 0.00 3.95
214 219 1.497716 TCTCGGCTTAGATGGGTAGGA 59.502 52.381 0.00 0.00 0.00 2.94
215 220 1.614413 GTCTCGGCTTAGATGGGTAGG 59.386 57.143 0.00 0.00 0.00 3.18
219 224 0.824109 TGTGTCTCGGCTTAGATGGG 59.176 55.000 0.00 0.00 0.00 4.00
221 226 1.751351 TCCTGTGTCTCGGCTTAGATG 59.249 52.381 0.00 0.00 0.00 2.90
276 282 3.231736 TATTCGCCTCCCCTCCGC 61.232 66.667 0.00 0.00 0.00 5.54
277 283 2.131709 TGTATTCGCCTCCCCTCCG 61.132 63.158 0.00 0.00 0.00 4.63
278 284 1.335132 TGTGTATTCGCCTCCCCTCC 61.335 60.000 0.00 0.00 0.00 4.30
279 285 0.105039 CTGTGTATTCGCCTCCCCTC 59.895 60.000 0.00 0.00 0.00 4.30
280 286 1.338136 CCTGTGTATTCGCCTCCCCT 61.338 60.000 0.00 0.00 0.00 4.79
281 287 1.146263 CCTGTGTATTCGCCTCCCC 59.854 63.158 0.00 0.00 0.00 4.81
282 288 0.252197 AACCTGTGTATTCGCCTCCC 59.748 55.000 0.00 0.00 0.00 4.30
283 289 1.653151 GAACCTGTGTATTCGCCTCC 58.347 55.000 0.00 0.00 0.00 4.30
284 290 1.278238 CGAACCTGTGTATTCGCCTC 58.722 55.000 0.00 0.00 41.00 4.70
285 291 3.436001 CGAACCTGTGTATTCGCCT 57.564 52.632 0.00 0.00 41.00 5.52
293 299 0.243907 CTCCATCGACGAACCTGTGT 59.756 55.000 0.00 0.00 0.00 3.72
300 306 2.159099 CCCTTTGATCTCCATCGACGAA 60.159 50.000 0.00 0.00 0.00 3.85
308 314 6.642733 AAGTATTCTTCCCTTTGATCTCCA 57.357 37.500 0.00 0.00 0.00 3.86
316 322 6.504279 TGACTAGGGAAAGTATTCTTCCCTTT 59.496 38.462 24.38 14.12 42.78 3.11
327 333 2.232941 CGCAAGGTGACTAGGGAAAGTA 59.767 50.000 0.00 0.00 42.68 2.24
377 385 0.250513 ATTCTGCCGAGGGTTCTCAC 59.749 55.000 0.00 0.00 39.95 3.51
379 387 0.537188 TGATTCTGCCGAGGGTTCTC 59.463 55.000 0.00 0.00 36.69 2.87
403 411 5.706833 GTGAAGTAAATAAAAACGGAGGGGA 59.293 40.000 0.00 0.00 0.00 4.81
633 653 6.988622 TTGTCTCGGTTCAAACTTCTAAAA 57.011 33.333 0.00 0.00 0.00 1.52
638 658 8.797266 ATTAAATTTGTCTCGGTTCAAACTTC 57.203 30.769 0.00 0.00 36.58 3.01
647 668 6.315393 ACTTCGCATATTAAATTTGTCTCGGT 59.685 34.615 0.00 0.00 0.00 4.69
648 669 6.715464 ACTTCGCATATTAAATTTGTCTCGG 58.285 36.000 0.00 0.00 0.00 4.63
666 687 4.097437 CCCCTCCCTTTTTATTTACTTCGC 59.903 45.833 0.00 0.00 0.00 4.70
677 698 1.151760 AACGTACCCCCTCCCTTTTT 58.848 50.000 0.00 0.00 0.00 1.94
682 703 1.052694 ATGCTAACGTACCCCCTCCC 61.053 60.000 0.00 0.00 0.00 4.30
686 707 0.179029 ATGCATGCTAACGTACCCCC 60.179 55.000 20.33 0.00 0.00 5.40
687 708 1.675552 AATGCATGCTAACGTACCCC 58.324 50.000 20.33 0.00 0.00 4.95
688 709 3.488553 GGAAAATGCATGCTAACGTACCC 60.489 47.826 20.33 6.23 0.00 3.69
689 710 3.691498 GGAAAATGCATGCTAACGTACC 58.309 45.455 20.33 9.77 0.00 3.34
690 711 3.350912 CGGAAAATGCATGCTAACGTAC 58.649 45.455 20.33 3.13 0.00 3.67
691 712 2.353269 CCGGAAAATGCATGCTAACGTA 59.647 45.455 20.33 0.00 0.00 3.57
692 713 1.132262 CCGGAAAATGCATGCTAACGT 59.868 47.619 20.33 0.00 0.00 3.99
709 730 3.439540 CCCCATCGTTTGCACCGG 61.440 66.667 0.00 0.00 0.00 5.28
821 846 0.106918 TGTTCTGGGGTTGCTTTCGT 60.107 50.000 0.00 0.00 0.00 3.85
956 986 2.992114 AGCGAGGAGTGGCGAGTT 60.992 61.111 0.00 0.00 31.47 3.01
1539 1582 2.583319 ATGATGCGCGAGGACACG 60.583 61.111 12.10 0.00 0.00 4.49
1626 1671 1.813786 AGCACAGGACTCTAGTTCGAC 59.186 52.381 0.00 0.00 0.00 4.20
1737 1782 0.397114 GGATCCCACATTGGAACCCC 60.397 60.000 0.00 0.00 40.96 4.95
1868 1914 2.308866 ACCAACCCAAAGTCCTCCTATG 59.691 50.000 0.00 0.00 0.00 2.23
2000 2047 5.734855 AATCTGAACGTTCGGGATTTATG 57.265 39.130 31.38 10.33 32.44 1.90
2018 2065 1.551883 GGGTTGCCATGCTTGAAATCT 59.448 47.619 0.22 0.00 0.00 2.40
2024 2071 1.080569 GTTCGGGTTGCCATGCTTG 60.081 57.895 0.00 0.00 0.00 4.01
2049 2096 2.350388 CGCGTGAACTAAAGTTGCCATT 60.350 45.455 0.00 0.00 38.56 3.16
2084 2131 3.434637 TCGCTTTTTGTCAGAAAACTGC 58.565 40.909 0.00 0.00 0.00 4.40
2085 2132 5.095490 AGTTCGCTTTTTGTCAGAAAACTG 58.905 37.500 0.00 0.00 0.00 3.16
2086 2133 5.310720 AGTTCGCTTTTTGTCAGAAAACT 57.689 34.783 0.00 0.00 0.00 2.66
2087 2134 5.220209 CCAAGTTCGCTTTTTGTCAGAAAAC 60.220 40.000 0.00 0.00 34.74 2.43
2088 2135 4.862018 CCAAGTTCGCTTTTTGTCAGAAAA 59.138 37.500 0.00 0.00 34.74 2.29
2089 2136 4.156922 TCCAAGTTCGCTTTTTGTCAGAAA 59.843 37.500 0.00 0.00 34.74 2.52
2092 2139 3.181501 TGTCCAAGTTCGCTTTTTGTCAG 60.182 43.478 0.00 0.00 34.74 3.51
2094 2141 3.414549 TGTCCAAGTTCGCTTTTTGTC 57.585 42.857 0.00 0.00 34.74 3.18
2095 2142 3.859411 TTGTCCAAGTTCGCTTTTTGT 57.141 38.095 0.00 0.00 34.74 2.83
2096 2143 4.173256 ACTTTGTCCAAGTTCGCTTTTTG 58.827 39.130 0.00 0.00 43.89 2.44
2141 2192 0.179043 TAGTTGACGCAAGGTGGCAA 60.179 50.000 0.00 0.00 38.85 4.52
2185 2236 8.433421 AACGTTCGGATTTTAATCATATCACT 57.567 30.769 0.00 0.00 37.15 3.41
2211 2262 7.808279 ATATTTAGGACTCCGATAAATCCCA 57.192 36.000 5.85 0.00 32.75 4.37
2224 2275 7.582719 TCATGGTGGCTTTTATATTTAGGACT 58.417 34.615 0.00 0.00 0.00 3.85
2241 2295 8.526147 ACAGAATTTTAAAAGAGATCATGGTGG 58.474 33.333 6.79 0.00 0.00 4.61
2315 2369 4.455877 GCTAGGCTCACACAACAGTAAAAT 59.544 41.667 0.00 0.00 0.00 1.82
2323 2377 0.321122 AGCAGCTAGGCTCACACAAC 60.321 55.000 0.00 0.00 41.05 3.32
2377 2439 1.200252 CACCGAGACCTGACACTACAG 59.800 57.143 0.00 0.00 37.61 2.74
2410 2472 3.181476 ACCTGCCACTTAACAAGCAAAAG 60.181 43.478 0.00 0.00 34.26 2.27
2795 2927 6.670695 AGTTGGAATCTTTTAGCATTTGGT 57.329 33.333 0.00 0.00 0.00 3.67
3392 5144 2.672961 TACCAGACAATCAGAAGGCG 57.327 50.000 0.00 0.00 0.00 5.52
3602 5378 6.209391 AGCATATCCTGTTGTTTTGCTTAACT 59.791 34.615 0.00 0.00 35.57 2.24
3789 5623 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
3804 5638 4.077387 TCTGGGGAGGAATTATAGGAACCT 60.077 45.833 0.00 0.00 0.00 3.50
3817 5651 4.348495 GGTGGGGTCTGGGGAGGA 62.348 72.222 0.00 0.00 0.00 3.71
3837 5671 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
4030 5864 5.382303 CAATGTGTCACCGACAAGAATTAC 58.618 41.667 0.00 0.00 44.49 1.89
4409 6243 1.296727 GCGGGGATAGTACAGCAAAC 58.703 55.000 0.00 0.00 0.00 2.93
4437 6271 3.159213 ACAAATCCTGCATCTGGTTCA 57.841 42.857 0.00 0.00 0.00 3.18
4543 6382 8.753497 ATCACAAGTTTCTCTTTTCCTAACTT 57.247 30.769 0.00 0.00 39.03 2.66
4683 6537 7.070821 ACCGATCCCACTAACAGTAATTATTCT 59.929 37.037 0.00 0.00 0.00 2.40
4703 6557 0.099436 GCAGGCATGACAAACCGATC 59.901 55.000 0.62 0.00 0.00 3.69
4804 6658 3.176552 TGCAACAAAACAATGGTGAGG 57.823 42.857 0.00 0.00 40.55 3.86
4817 6673 5.825679 AGTTACTAACACTTCCATGCAACAA 59.174 36.000 0.00 0.00 0.00 2.83
4818 6674 5.238432 CAGTTACTAACACTTCCATGCAACA 59.762 40.000 0.00 0.00 0.00 3.33
4819 6675 5.468746 TCAGTTACTAACACTTCCATGCAAC 59.531 40.000 0.00 0.00 0.00 4.17
4820 6676 5.616270 TCAGTTACTAACACTTCCATGCAA 58.384 37.500 0.00 0.00 0.00 4.08
4833 6689 8.547967 AGCTTCGAAAATGAATCAGTTACTAA 57.452 30.769 0.00 0.00 0.00 2.24
5166 7097 6.910536 ATTATTTCTAGGAAACAGACTGCG 57.089 37.500 1.25 0.00 0.00 5.18
5324 7567 6.780031 TCCATTCCCTGTTAAAAGAATGAACA 59.220 34.615 11.99 0.00 45.41 3.18
5330 7573 5.714806 GGTCATCCATTCCCTGTTAAAAGAA 59.285 40.000 0.00 0.00 0.00 2.52
5401 7644 1.303317 CTTGTGTACAGTGGCCCCC 60.303 63.158 0.00 0.00 0.00 5.40
5404 7647 0.875059 GAAGCTTGTGTACAGTGGCC 59.125 55.000 2.10 0.00 0.00 5.36
5578 7821 0.436531 GCTCTGCAACTTCTTCGTCG 59.563 55.000 0.00 0.00 0.00 5.12
5664 7907 6.149474 TCCTACTAGTAACGTCTTGTTGTACC 59.851 42.308 3.76 0.00 42.01 3.34
5738 7982 3.120321 TGTTTTACACTCGGTCAGCAT 57.880 42.857 0.00 0.00 0.00 3.79
5739 7983 2.605837 TGTTTTACACTCGGTCAGCA 57.394 45.000 0.00 0.00 0.00 4.41
5740 7984 3.848554 GCTTTGTTTTACACTCGGTCAGC 60.849 47.826 0.00 0.00 0.00 4.26
5741 7985 3.560068 AGCTTTGTTTTACACTCGGTCAG 59.440 43.478 0.00 0.00 0.00 3.51
5742 7986 3.537580 AGCTTTGTTTTACACTCGGTCA 58.462 40.909 0.00 0.00 0.00 4.02
5743 7987 3.808174 AGAGCTTTGTTTTACACTCGGTC 59.192 43.478 0.00 0.00 0.00 4.79
5744 7988 3.560068 CAGAGCTTTGTTTTACACTCGGT 59.440 43.478 0.00 0.00 0.00 4.69
5751 8019 4.261197 CCCAGACACAGAGCTTTGTTTTAC 60.261 45.833 7.25 0.07 0.00 2.01
5758 8026 0.398318 GACCCCAGACACAGAGCTTT 59.602 55.000 0.00 0.00 0.00 3.51
5767 8035 1.616327 CCCATCCAGACCCCAGACA 60.616 63.158 0.00 0.00 0.00 3.41
5799 8067 6.106003 TGTACATTATACTGAACCAGCACAG 58.894 40.000 0.00 0.00 39.65 3.66
5892 8160 1.141665 GGCCAATCGAATGCCCAAC 59.858 57.895 11.08 0.00 39.30 3.77
5896 8164 1.031571 TCACAGGCCAATCGAATGCC 61.032 55.000 5.01 13.59 45.70 4.40
5897 8165 1.027357 ATCACAGGCCAATCGAATGC 58.973 50.000 5.01 0.00 0.00 3.56
5898 8166 2.797087 GCAATCACAGGCCAATCGAATG 60.797 50.000 5.01 0.04 0.00 2.67
5904 8176 2.887360 GCGCAATCACAGGCCAAT 59.113 55.556 5.01 0.00 0.00 3.16
5927 8199 1.327764 GTGCAGAATAGGTACGCAAGC 59.672 52.381 0.00 0.00 45.62 4.01
5946 8219 6.832520 TTACATCACATGGTAAGCAAATGT 57.167 33.333 0.00 0.00 34.92 2.71
5957 8230 3.836146 ACCATCCCATTACATCACATGG 58.164 45.455 0.00 0.00 39.92 3.66
5962 8235 4.022603 CAACCAACCATCCCATTACATCA 58.977 43.478 0.00 0.00 0.00 3.07
5963 8236 4.023291 ACAACCAACCATCCCATTACATC 58.977 43.478 0.00 0.00 0.00 3.06
5964 8237 4.059773 ACAACCAACCATCCCATTACAT 57.940 40.909 0.00 0.00 0.00 2.29
6005 8278 5.646360 GCCAAGGTTACTTTACTTCTGCATA 59.354 40.000 0.00 0.00 33.81 3.14
6006 8279 4.459337 GCCAAGGTTACTTTACTTCTGCAT 59.541 41.667 0.00 0.00 33.81 3.96
6007 8280 3.818773 GCCAAGGTTACTTTACTTCTGCA 59.181 43.478 0.00 0.00 33.81 4.41
6008 8281 4.072839 AGCCAAGGTTACTTTACTTCTGC 58.927 43.478 0.00 0.00 33.81 4.26
6009 8282 5.049405 CACAGCCAAGGTTACTTTACTTCTG 60.049 44.000 0.00 0.00 33.81 3.02
6010 8283 5.063880 CACAGCCAAGGTTACTTTACTTCT 58.936 41.667 0.00 0.00 33.81 2.85
6011 8284 4.320275 GCACAGCCAAGGTTACTTTACTTC 60.320 45.833 0.00 0.00 33.81 3.01
6012 8285 3.568430 GCACAGCCAAGGTTACTTTACTT 59.432 43.478 0.00 0.00 33.81 2.24
6013 8286 3.146847 GCACAGCCAAGGTTACTTTACT 58.853 45.455 0.00 0.00 33.81 2.24
6014 8287 3.554259 GCACAGCCAAGGTTACTTTAC 57.446 47.619 0.00 0.00 33.81 2.01
6038 8311 5.572475 GCTATATTTCAGGAATCAGGAGGGG 60.572 48.000 0.00 0.00 0.00 4.79
6041 8314 8.512956 CAAATGCTATATTTCAGGAATCAGGAG 58.487 37.037 0.00 0.00 0.00 3.69
6076 8349 2.577449 AAAGGAAAAGGCAACACACG 57.423 45.000 0.00 0.00 41.41 4.49
6099 8374 5.751028 CCTATGGCGTTCTTCAAAAACAAAA 59.249 36.000 0.00 0.00 0.00 2.44
6100 8375 5.163499 ACCTATGGCGTTCTTCAAAAACAAA 60.163 36.000 0.00 0.00 0.00 2.83
6101 8376 4.339814 ACCTATGGCGTTCTTCAAAAACAA 59.660 37.500 0.00 0.00 0.00 2.83
6102 8377 3.886505 ACCTATGGCGTTCTTCAAAAACA 59.113 39.130 0.00 0.00 0.00 2.83
6103 8378 4.499037 ACCTATGGCGTTCTTCAAAAAC 57.501 40.909 0.00 0.00 0.00 2.43
6104 8379 4.319911 CGAACCTATGGCGTTCTTCAAAAA 60.320 41.667 8.17 0.00 37.96 1.94
6105 8380 3.187637 CGAACCTATGGCGTTCTTCAAAA 59.812 43.478 8.17 0.00 37.96 2.44
6106 8381 2.739913 CGAACCTATGGCGTTCTTCAAA 59.260 45.455 8.17 0.00 37.96 2.69
6107 8382 2.028839 TCGAACCTATGGCGTTCTTCAA 60.029 45.455 8.17 0.00 37.96 2.69
6108 8383 1.546923 TCGAACCTATGGCGTTCTTCA 59.453 47.619 8.17 0.00 37.96 3.02
6109 8384 2.288961 TCGAACCTATGGCGTTCTTC 57.711 50.000 8.17 0.00 37.96 2.87
6110 8385 2.431057 AGATCGAACCTATGGCGTTCTT 59.569 45.455 0.00 0.00 37.96 2.52
6111 8386 2.032620 AGATCGAACCTATGGCGTTCT 58.967 47.619 0.00 0.00 37.96 3.01
6112 8387 2.128035 CAGATCGAACCTATGGCGTTC 58.872 52.381 0.00 0.00 36.97 3.95
6113 8388 1.202533 CCAGATCGAACCTATGGCGTT 60.203 52.381 0.00 0.00 0.00 4.84
6114 8389 0.389391 CCAGATCGAACCTATGGCGT 59.611 55.000 0.00 0.00 0.00 5.68
6115 8390 0.946221 GCCAGATCGAACCTATGGCG 60.946 60.000 7.35 0.00 46.19 5.69
6117 8392 1.001406 GAGGCCAGATCGAACCTATGG 59.999 57.143 5.01 0.00 30.95 2.74
6118 8393 1.001406 GGAGGCCAGATCGAACCTATG 59.999 57.143 5.01 0.00 30.95 2.23
6119 8394 1.343069 GGAGGCCAGATCGAACCTAT 58.657 55.000 5.01 0.00 30.95 2.57
6120 8395 0.759436 GGGAGGCCAGATCGAACCTA 60.759 60.000 5.01 0.00 30.95 3.08
6121 8396 2.066999 GGGAGGCCAGATCGAACCT 61.067 63.158 5.01 3.45 34.43 3.50
6122 8397 1.627297 AAGGGAGGCCAGATCGAACC 61.627 60.000 5.01 0.00 0.00 3.62
6123 8398 1.120530 TAAGGGAGGCCAGATCGAAC 58.879 55.000 5.01 0.00 0.00 3.95
6124 8399 1.694150 CATAAGGGAGGCCAGATCGAA 59.306 52.381 5.01 0.00 0.00 3.71
6125 8400 1.342074 CATAAGGGAGGCCAGATCGA 58.658 55.000 5.01 0.00 0.00 3.59
6126 8401 1.001406 GACATAAGGGAGGCCAGATCG 59.999 57.143 5.01 0.00 0.00 3.69
6127 8402 2.050144 TGACATAAGGGAGGCCAGATC 58.950 52.381 5.01 0.00 0.00 2.75
6128 8403 1.771255 GTGACATAAGGGAGGCCAGAT 59.229 52.381 5.01 0.00 0.00 2.90
6129 8404 1.204146 GTGACATAAGGGAGGCCAGA 58.796 55.000 5.01 0.00 0.00 3.86
6130 8405 0.181350 GGTGACATAAGGGAGGCCAG 59.819 60.000 5.01 0.00 0.00 4.85
6131 8406 1.622607 CGGTGACATAAGGGAGGCCA 61.623 60.000 5.01 0.00 0.00 5.36
6132 8407 1.146263 CGGTGACATAAGGGAGGCC 59.854 63.158 0.00 0.00 0.00 5.19
6133 8408 0.252197 AACGGTGACATAAGGGAGGC 59.748 55.000 0.00 0.00 0.00 4.70
6134 8409 2.102588 CCTAACGGTGACATAAGGGAGG 59.897 54.545 0.00 0.00 0.00 4.30
6135 8410 3.028850 TCCTAACGGTGACATAAGGGAG 58.971 50.000 0.00 0.00 0.00 4.30
6136 8411 3.028850 CTCCTAACGGTGACATAAGGGA 58.971 50.000 0.00 0.00 0.00 4.20
6137 8412 2.483188 GCTCCTAACGGTGACATAAGGG 60.483 54.545 0.00 0.00 0.00 3.95
6138 8413 2.167693 TGCTCCTAACGGTGACATAAGG 59.832 50.000 0.00 0.00 0.00 2.69
6139 8414 3.448686 CTGCTCCTAACGGTGACATAAG 58.551 50.000 0.00 0.00 0.00 1.73
6140 8415 2.167693 CCTGCTCCTAACGGTGACATAA 59.832 50.000 0.00 0.00 0.00 1.90
6141 8416 1.754803 CCTGCTCCTAACGGTGACATA 59.245 52.381 0.00 0.00 0.00 2.29
6142 8417 0.537188 CCTGCTCCTAACGGTGACAT 59.463 55.000 0.00 0.00 0.00 3.06
6143 8418 1.541310 CCCTGCTCCTAACGGTGACA 61.541 60.000 0.00 0.00 0.00 3.58
6144 8419 1.218316 CCCTGCTCCTAACGGTGAC 59.782 63.158 0.00 0.00 0.00 3.67
6145 8420 0.970937 CTCCCTGCTCCTAACGGTGA 60.971 60.000 0.00 0.00 0.00 4.02
6146 8421 0.970937 TCTCCCTGCTCCTAACGGTG 60.971 60.000 0.00 0.00 0.00 4.94
6147 8422 0.971447 GTCTCCCTGCTCCTAACGGT 60.971 60.000 0.00 0.00 0.00 4.83
6148 8423 0.684805 AGTCTCCCTGCTCCTAACGG 60.685 60.000 0.00 0.00 0.00 4.44
6149 8424 1.134965 CAAGTCTCCCTGCTCCTAACG 60.135 57.143 0.00 0.00 0.00 3.18
6150 8425 2.093921 GTCAAGTCTCCCTGCTCCTAAC 60.094 54.545 0.00 0.00 0.00 2.34
6151 8426 2.180276 GTCAAGTCTCCCTGCTCCTAA 58.820 52.381 0.00 0.00 0.00 2.69
6152 8427 1.853963 GTCAAGTCTCCCTGCTCCTA 58.146 55.000 0.00 0.00 0.00 2.94
6153 8428 1.254284 CGTCAAGTCTCCCTGCTCCT 61.254 60.000 0.00 0.00 0.00 3.69
6154 8429 1.216710 CGTCAAGTCTCCCTGCTCC 59.783 63.158 0.00 0.00 0.00 4.70
6155 8430 0.172352 CTCGTCAAGTCTCCCTGCTC 59.828 60.000 0.00 0.00 0.00 4.26
6156 8431 1.254284 CCTCGTCAAGTCTCCCTGCT 61.254 60.000 0.00 0.00 0.00 4.24
6157 8432 1.216710 CCTCGTCAAGTCTCCCTGC 59.783 63.158 0.00 0.00 0.00 4.85
6158 8433 1.216710 GCCTCGTCAAGTCTCCCTG 59.783 63.158 0.00 0.00 0.00 4.45
6159 8434 0.832135 TTGCCTCGTCAAGTCTCCCT 60.832 55.000 0.00 0.00 0.00 4.20
6160 8435 0.034896 TTTGCCTCGTCAAGTCTCCC 59.965 55.000 0.00 0.00 0.00 4.30
6161 8436 1.433534 CTTTGCCTCGTCAAGTCTCC 58.566 55.000 0.00 0.00 0.00 3.71
6162 8437 1.433534 CCTTTGCCTCGTCAAGTCTC 58.566 55.000 0.00 0.00 0.00 3.36
6163 8438 0.603975 GCCTTTGCCTCGTCAAGTCT 60.604 55.000 0.00 0.00 0.00 3.24
6164 8439 1.869690 GCCTTTGCCTCGTCAAGTC 59.130 57.895 0.00 0.00 0.00 3.01
6165 8440 4.065110 GCCTTTGCCTCGTCAAGT 57.935 55.556 0.00 0.00 0.00 3.16
6175 8450 2.659016 GGCTCCTTTGGCCTTTGC 59.341 61.111 3.32 0.00 45.57 3.68
6210 8485 1.878522 CTCCAATTCGCCGTCTCCG 60.879 63.158 0.00 0.00 0.00 4.63
6211 8486 0.528684 CTCTCCAATTCGCCGTCTCC 60.529 60.000 0.00 0.00 0.00 3.71
6212 8487 1.148759 GCTCTCCAATTCGCCGTCTC 61.149 60.000 0.00 0.00 0.00 3.36
6213 8488 1.153549 GCTCTCCAATTCGCCGTCT 60.154 57.895 0.00 0.00 0.00 4.18
6214 8489 2.517450 CGCTCTCCAATTCGCCGTC 61.517 63.158 0.00 0.00 0.00 4.79
6215 8490 2.509336 CGCTCTCCAATTCGCCGT 60.509 61.111 0.00 0.00 0.00 5.68
6216 8491 3.929948 GCGCTCTCCAATTCGCCG 61.930 66.667 0.00 0.00 41.53 6.46
6217 8492 1.922135 TTTGCGCTCTCCAATTCGCC 61.922 55.000 9.73 0.00 46.14 5.54
6218 8493 0.109781 TTTTGCGCTCTCCAATTCGC 60.110 50.000 9.73 0.43 46.78 4.70
6219 8494 1.606606 GTTTTGCGCTCTCCAATTCG 58.393 50.000 9.73 0.00 0.00 3.34
6220 8495 1.606606 CGTTTTGCGCTCTCCAATTC 58.393 50.000 9.73 0.00 0.00 2.17
6221 8496 0.240945 CCGTTTTGCGCTCTCCAATT 59.759 50.000 9.73 0.00 39.71 2.32
6222 8497 0.605319 TCCGTTTTGCGCTCTCCAAT 60.605 50.000 9.73 0.00 39.71 3.16
6223 8498 1.227704 TCCGTTTTGCGCTCTCCAA 60.228 52.632 9.73 0.00 39.71 3.53
6224 8499 1.667830 CTCCGTTTTGCGCTCTCCA 60.668 57.895 9.73 0.00 39.71 3.86
6225 8500 1.355066 CTCTCCGTTTTGCGCTCTCC 61.355 60.000 9.73 0.00 39.71 3.71
6226 8501 0.388649 TCTCTCCGTTTTGCGCTCTC 60.389 55.000 9.73 0.00 39.71 3.20
6227 8502 0.389166 CTCTCTCCGTTTTGCGCTCT 60.389 55.000 9.73 0.00 39.71 4.09
6228 8503 0.388649 TCTCTCTCCGTTTTGCGCTC 60.389 55.000 9.73 0.00 39.71 5.03
6229 8504 0.389166 CTCTCTCTCCGTTTTGCGCT 60.389 55.000 9.73 0.00 39.71 5.92
6230 8505 1.355066 CCTCTCTCTCCGTTTTGCGC 61.355 60.000 0.00 0.00 39.71 6.09
6231 8506 0.737715 CCCTCTCTCTCCGTTTTGCG 60.738 60.000 0.00 0.00 40.95 4.85
6232 8507 0.321996 ACCCTCTCTCTCCGTTTTGC 59.678 55.000 0.00 0.00 0.00 3.68
6233 8508 1.896465 AGACCCTCTCTCTCCGTTTTG 59.104 52.381 0.00 0.00 0.00 2.44
6234 8509 2.172679 GAGACCCTCTCTCTCCGTTTT 58.827 52.381 0.00 0.00 42.23 2.43
6235 8510 1.842052 GAGACCCTCTCTCTCCGTTT 58.158 55.000 0.00 0.00 42.23 3.60
6236 8511 3.581163 GAGACCCTCTCTCTCCGTT 57.419 57.895 0.00 0.00 42.23 4.44
6244 8519 2.238395 AGATGGCAAAAGAGACCCTCTC 59.762 50.000 0.00 0.00 40.28 3.20
6245 8520 2.273619 AGATGGCAAAAGAGACCCTCT 58.726 47.619 0.00 0.00 43.37 3.69
6246 8521 2.797177 AGATGGCAAAAGAGACCCTC 57.203 50.000 0.00 0.00 0.00 4.30
6247 8522 3.330701 TGTAAGATGGCAAAAGAGACCCT 59.669 43.478 0.00 0.00 0.00 4.34
6248 8523 3.686016 TGTAAGATGGCAAAAGAGACCC 58.314 45.455 0.00 0.00 0.00 4.46
6249 8524 3.691609 CCTGTAAGATGGCAAAAGAGACC 59.308 47.826 0.00 0.00 34.07 3.85
6250 8525 4.954092 CCTGTAAGATGGCAAAAGAGAC 57.046 45.455 0.00 0.00 34.07 3.36
6259 8534 2.203209 CCCCGCCTGTAAGATGGC 60.203 66.667 0.00 0.00 45.25 4.40
6260 8535 2.203209 GCCCCGCCTGTAAGATGG 60.203 66.667 0.00 0.00 34.07 3.51
6261 8536 2.203209 GGCCCCGCCTGTAAGATG 60.203 66.667 0.00 0.00 46.69 2.90
6273 8548 3.147595 GGAATTCAAGCGGGCCCC 61.148 66.667 18.66 9.47 0.00 5.80
6274 8549 3.147595 GGGAATTCAAGCGGGCCC 61.148 66.667 13.57 13.57 0.00 5.80
6275 8550 3.518068 CGGGAATTCAAGCGGGCC 61.518 66.667 7.93 0.00 0.00 5.80
6276 8551 3.518068 CCGGGAATTCAAGCGGGC 61.518 66.667 7.93 0.00 0.00 6.13
6277 8552 1.248101 AAACCGGGAATTCAAGCGGG 61.248 55.000 6.32 6.52 0.00 6.13
6278 8553 0.601057 AAAACCGGGAATTCAAGCGG 59.399 50.000 6.32 0.00 0.00 5.52
6279 8554 1.696988 CAAAACCGGGAATTCAAGCG 58.303 50.000 6.32 0.00 0.00 4.68
6280 8555 1.428448 GCAAAACCGGGAATTCAAGC 58.572 50.000 6.32 0.24 0.00 4.01
6281 8556 1.337728 GGGCAAAACCGGGAATTCAAG 60.338 52.381 6.32 0.00 40.62 3.02
6282 8557 0.682292 GGGCAAAACCGGGAATTCAA 59.318 50.000 6.32 0.00 40.62 2.69
6283 8558 1.188871 GGGGCAAAACCGGGAATTCA 61.189 55.000 6.32 0.00 40.62 2.57
6284 8559 0.902984 AGGGGCAAAACCGGGAATTC 60.903 55.000 6.32 0.00 40.62 2.17
6285 8560 1.157513 AGGGGCAAAACCGGGAATT 59.842 52.632 6.32 0.00 40.62 2.17
6286 8561 1.609210 CAGGGGCAAAACCGGGAAT 60.609 57.895 6.32 0.00 40.62 3.01
6287 8562 2.203567 CAGGGGCAAAACCGGGAA 60.204 61.111 6.32 0.00 40.62 3.97
6288 8563 4.986708 GCAGGGGCAAAACCGGGA 62.987 66.667 6.32 0.00 40.62 5.14
6291 8566 3.225069 CTTGGCAGGGGCAAAACCG 62.225 63.158 6.67 0.00 46.84 4.44
6292 8567 2.099652 GACTTGGCAGGGGCAAAACC 62.100 60.000 0.44 0.00 46.84 3.27
6293 8568 1.367471 GACTTGGCAGGGGCAAAAC 59.633 57.895 0.44 0.82 46.84 2.43
6294 8569 0.689080 TTGACTTGGCAGGGGCAAAA 60.689 50.000 8.09 0.00 46.84 2.44
6295 8570 0.471591 ATTGACTTGGCAGGGGCAAA 60.472 50.000 13.31 0.00 46.84 3.68
6296 8571 0.471591 AATTGACTTGGCAGGGGCAA 60.472 50.000 12.03 12.03 45.54 4.52
6297 8572 1.155859 AATTGACTTGGCAGGGGCA 59.844 52.632 0.44 0.00 43.71 5.36
6298 8573 0.899717 TCAATTGACTTGGCAGGGGC 60.900 55.000 3.38 0.00 35.43 5.80
6299 8574 0.890683 GTCAATTGACTTGGCAGGGG 59.109 55.000 27.66 0.00 39.36 4.79
6300 8575 0.890683 GGTCAATTGACTTGGCAGGG 59.109 55.000 31.81 0.00 41.44 4.45
6301 8576 1.542915 CTGGTCAATTGACTTGGCAGG 59.457 52.381 31.81 14.53 41.44 4.85
6302 8577 1.542915 CCTGGTCAATTGACTTGGCAG 59.457 52.381 31.81 27.65 41.44 4.85
6303 8578 1.144708 TCCTGGTCAATTGACTTGGCA 59.855 47.619 31.81 21.82 41.44 4.92
6304 8579 1.815003 CTCCTGGTCAATTGACTTGGC 59.185 52.381 31.81 18.87 44.20 4.52
6305 8580 3.341823 CTCTCCTGGTCAATTGACTTGG 58.658 50.000 31.81 29.84 44.20 3.61
6306 8581 3.341823 CCTCTCCTGGTCAATTGACTTG 58.658 50.000 31.81 24.20 44.20 3.16
6307 8582 2.307098 CCCTCTCCTGGTCAATTGACTT 59.693 50.000 31.81 0.00 44.20 3.01
6308 8583 1.912043 CCCTCTCCTGGTCAATTGACT 59.088 52.381 31.81 0.00 44.20 3.41
6309 8584 1.909302 TCCCTCTCCTGGTCAATTGAC 59.091 52.381 27.16 27.16 44.04 3.18
6310 8585 1.909302 GTCCCTCTCCTGGTCAATTGA 59.091 52.381 3.38 3.38 0.00 2.57
6311 8586 1.406069 CGTCCCTCTCCTGGTCAATTG 60.406 57.143 0.00 0.00 0.00 2.32
6312 8587 0.905357 CGTCCCTCTCCTGGTCAATT 59.095 55.000 0.00 0.00 0.00 2.32
6313 8588 1.617947 GCGTCCCTCTCCTGGTCAAT 61.618 60.000 0.00 0.00 0.00 2.57
6314 8589 2.283529 GCGTCCCTCTCCTGGTCAA 61.284 63.158 0.00 0.00 0.00 3.18
6315 8590 2.680352 GCGTCCCTCTCCTGGTCA 60.680 66.667 0.00 0.00 0.00 4.02
6316 8591 3.827898 CGCGTCCCTCTCCTGGTC 61.828 72.222 0.00 0.00 0.00 4.02
6317 8592 4.680537 ACGCGTCCCTCTCCTGGT 62.681 66.667 5.58 0.00 0.00 4.00
6318 8593 3.358076 GAACGCGTCCCTCTCCTGG 62.358 68.421 14.44 0.00 0.00 4.45
6319 8594 2.182030 GAACGCGTCCCTCTCCTG 59.818 66.667 14.44 0.00 0.00 3.86
6320 8595 3.441290 CGAACGCGTCCCTCTCCT 61.441 66.667 14.44 0.00 0.00 3.69
6330 8605 4.072088 GCAGGGAACACGAACGCG 62.072 66.667 3.53 3.53 44.79 6.01
6331 8606 2.665185 AGCAGGGAACACGAACGC 60.665 61.111 0.00 0.00 0.00 4.84
6332 8607 0.600255 AAGAGCAGGGAACACGAACG 60.600 55.000 0.00 0.00 0.00 3.95
6333 8608 1.149148 GAAGAGCAGGGAACACGAAC 58.851 55.000 0.00 0.00 0.00 3.95
6334 8609 0.319555 CGAAGAGCAGGGAACACGAA 60.320 55.000 0.00 0.00 0.00 3.85
6335 8610 1.289066 CGAAGAGCAGGGAACACGA 59.711 57.895 0.00 0.00 0.00 4.35
6336 8611 1.006102 ACGAAGAGCAGGGAACACG 60.006 57.895 0.00 0.00 0.00 4.49
6337 8612 1.009389 CGACGAAGAGCAGGGAACAC 61.009 60.000 0.00 0.00 0.00 3.32
6338 8613 1.176619 TCGACGAAGAGCAGGGAACA 61.177 55.000 0.00 0.00 0.00 3.18
6339 8614 0.733223 GTCGACGAAGAGCAGGGAAC 60.733 60.000 0.00 0.00 0.00 3.62
6340 8615 1.585006 GTCGACGAAGAGCAGGGAA 59.415 57.895 0.00 0.00 0.00 3.97
6341 8616 2.687805 CGTCGACGAAGAGCAGGGA 61.688 63.158 33.35 0.00 43.02 4.20
6342 8617 2.202492 CGTCGACGAAGAGCAGGG 60.202 66.667 33.35 0.00 43.02 4.45
6343 8618 2.876645 GCGTCGACGAAGAGCAGG 60.877 66.667 39.74 9.55 43.02 4.85
6344 8619 2.876645 GGCGTCGACGAAGAGCAG 60.877 66.667 39.74 10.32 43.02 4.24
6345 8620 4.753877 CGGCGTCGACGAAGAGCA 62.754 66.667 39.74 0.00 43.02 4.26
6346 8621 4.456253 TCGGCGTCGACGAAGAGC 62.456 66.667 39.74 21.79 41.42 4.09
6368 8643 2.420568 TATGTCGCCGTGGAGACCC 61.421 63.158 18.28 0.00 42.82 4.46
6369 8644 1.226888 GTATGTCGCCGTGGAGACC 60.227 63.158 18.28 1.68 42.82 3.85
6370 8645 1.226888 GGTATGTCGCCGTGGAGAC 60.227 63.158 14.90 14.90 43.56 3.36
6371 8646 2.767445 CGGTATGTCGCCGTGGAGA 61.767 63.158 0.00 0.00 43.84 3.71
6372 8647 2.278596 CGGTATGTCGCCGTGGAG 60.279 66.667 0.00 0.00 43.84 3.86
6408 8683 4.796231 CGTCGCCTTCACCGGGAG 62.796 72.222 6.32 0.00 0.00 4.30
6412 8687 4.351938 TCACCGTCGCCTTCACCG 62.352 66.667 0.00 0.00 0.00 4.94
6413 8688 2.432628 CTCACCGTCGCCTTCACC 60.433 66.667 0.00 0.00 0.00 4.02
6414 8689 1.733399 GACTCACCGTCGCCTTCAC 60.733 63.158 0.00 0.00 32.04 3.18
6415 8690 2.649034 GACTCACCGTCGCCTTCA 59.351 61.111 0.00 0.00 32.04 3.02
6430 8705 1.569072 AGAGGGGAGAAGAGAGGAGAC 59.431 57.143 0.00 0.00 0.00 3.36
6431 8706 1.994399 AGAGGGGAGAAGAGAGGAGA 58.006 55.000 0.00 0.00 0.00 3.71
6432 8707 2.666317 GAAGAGGGGAGAAGAGAGGAG 58.334 57.143 0.00 0.00 0.00 3.69
6433 8708 1.064314 CGAAGAGGGGAGAAGAGAGGA 60.064 57.143 0.00 0.00 0.00 3.71
6434 8709 1.398692 CGAAGAGGGGAGAAGAGAGG 58.601 60.000 0.00 0.00 0.00 3.69
6435 8710 0.744281 GCGAAGAGGGGAGAAGAGAG 59.256 60.000 0.00 0.00 0.00 3.20
6436 8711 0.684805 GGCGAAGAGGGGAGAAGAGA 60.685 60.000 0.00 0.00 0.00 3.10
6437 8712 0.972983 TGGCGAAGAGGGGAGAAGAG 60.973 60.000 0.00 0.00 0.00 2.85
6438 8713 0.544357 TTGGCGAAGAGGGGAGAAGA 60.544 55.000 0.00 0.00 0.00 2.87
6439 8714 0.107945 CTTGGCGAAGAGGGGAGAAG 60.108 60.000 1.62 0.00 0.00 2.85
6440 8715 0.836400 ACTTGGCGAAGAGGGGAGAA 60.836 55.000 16.00 0.00 32.98 2.87
6441 8716 1.229209 ACTTGGCGAAGAGGGGAGA 60.229 57.895 16.00 0.00 32.98 3.71
6442 8717 1.219393 GACTTGGCGAAGAGGGGAG 59.781 63.158 16.00 0.00 32.98 4.30
6443 8718 2.291043 GGACTTGGCGAAGAGGGGA 61.291 63.158 16.00 0.00 32.98 4.81
6444 8719 2.269241 GGACTTGGCGAAGAGGGG 59.731 66.667 16.00 0.00 32.98 4.79
6445 8720 2.269241 GGGACTTGGCGAAGAGGG 59.731 66.667 16.00 0.00 32.98 4.30
6446 8721 1.915078 ATGGGGACTTGGCGAAGAGG 61.915 60.000 16.00 0.00 32.98 3.69
6447 8722 0.745845 CATGGGGACTTGGCGAAGAG 60.746 60.000 16.00 0.00 32.98 2.85
6448 8723 1.299648 CATGGGGACTTGGCGAAGA 59.700 57.895 16.00 0.00 32.98 2.87
6449 8724 1.002134 ACATGGGGACTTGGCGAAG 60.002 57.895 6.95 6.95 39.68 3.79
6450 8725 1.002624 GACATGGGGACTTGGCGAA 60.003 57.895 0.00 0.00 39.68 4.70
6451 8726 2.668632 GACATGGGGACTTGGCGA 59.331 61.111 0.00 0.00 39.68 5.54
6452 8727 2.438434 GGACATGGGGACTTGGCG 60.438 66.667 0.00 0.00 44.28 5.69
6453 8728 2.043953 GGGACATGGGGACTTGGC 60.044 66.667 0.00 0.00 42.66 4.52
6454 8729 1.000896 GTGGGACATGGGGACTTGG 60.001 63.158 0.00 0.00 44.52 3.61
6455 8730 1.377202 CGTGGGACATGGGGACTTG 60.377 63.158 0.00 0.00 44.52 3.16
6456 8731 3.077907 CGTGGGACATGGGGACTT 58.922 61.111 0.00 0.00 44.52 3.01
6474 8749 3.979739 CTAGCCCTAGGTCGCCGC 61.980 72.222 8.29 3.21 0.00 6.53
6475 8750 3.296054 CCTAGCCCTAGGTCGCCG 61.296 72.222 8.29 0.00 45.93 6.46
6482 8757 2.699321 GACCACCTAAACCTAGCCCTAG 59.301 54.545 0.00 0.00 0.00 3.02
6483 8758 2.755686 GACCACCTAAACCTAGCCCTA 58.244 52.381 0.00 0.00 0.00 3.53
6484 8759 1.581223 GACCACCTAAACCTAGCCCT 58.419 55.000 0.00 0.00 0.00 5.19
6485 8760 0.177373 CGACCACCTAAACCTAGCCC 59.823 60.000 0.00 0.00 0.00 5.19
6486 8761 0.461516 GCGACCACCTAAACCTAGCC 60.462 60.000 0.00 0.00 0.00 3.93
6487 8762 0.461516 GGCGACCACCTAAACCTAGC 60.462 60.000 0.00 0.00 0.00 3.42
6488 8763 0.179119 CGGCGACCACCTAAACCTAG 60.179 60.000 0.00 0.00 0.00 3.02
6489 8764 1.892338 CGGCGACCACCTAAACCTA 59.108 57.895 0.00 0.00 0.00 3.08
6490 8765 2.660802 CGGCGACCACCTAAACCT 59.339 61.111 0.00 0.00 0.00 3.50
6491 8766 3.122971 GCGGCGACCACCTAAACC 61.123 66.667 12.98 0.00 0.00 3.27
6492 8767 3.122971 GGCGGCGACCACCTAAAC 61.123 66.667 12.98 0.00 0.00 2.01
6493 8768 4.745751 CGGCGGCGACCACCTAAA 62.746 66.667 29.19 0.00 0.00 1.85
6560 8835 4.180946 CGAGGACGCAGGAGACGG 62.181 72.222 0.00 0.00 34.00 4.79
6561 8836 4.180946 CCGAGGACGCAGGAGACG 62.181 72.222 0.00 0.00 38.29 4.18
6562 8837 4.500116 GCCGAGGACGCAGGAGAC 62.500 72.222 0.00 0.00 38.29 3.36
6589 8864 4.097361 GGGAGACGACCAAGGGGC 62.097 72.222 0.00 0.00 37.90 5.80
6600 8875 4.773117 GTCGTGGACGCGGGAGAC 62.773 72.222 12.47 8.83 39.60 3.36
6602 8877 4.129737 ATGTCGTGGACGCGGGAG 62.130 66.667 12.47 0.00 39.60 4.30
6603 8878 4.429212 CATGTCGTGGACGCGGGA 62.429 66.667 12.47 0.00 39.60 5.14
6612 8887 3.490759 GGCAGCGTCCATGTCGTG 61.491 66.667 8.80 7.27 0.00 4.35
6613 8888 4.760047 GGGCAGCGTCCATGTCGT 62.760 66.667 8.80 0.00 0.00 4.34
6615 8890 4.101448 AGGGGCAGCGTCCATGTC 62.101 66.667 6.24 0.00 0.00 3.06
6616 8891 4.415150 CAGGGGCAGCGTCCATGT 62.415 66.667 5.82 0.00 34.17 3.21
6634 8909 2.430921 CAAGCAGCAGCAGCAAGC 60.431 61.111 12.92 7.16 45.49 4.01
6635 8910 1.371758 CACAAGCAGCAGCAGCAAG 60.372 57.895 12.92 6.26 45.49 4.01
6636 8911 2.725641 CACAAGCAGCAGCAGCAA 59.274 55.556 12.92 0.00 45.49 3.91
6637 8912 3.292159 CCACAAGCAGCAGCAGCA 61.292 61.111 12.92 0.00 45.49 4.41
6638 8913 4.052229 CCCACAAGCAGCAGCAGC 62.052 66.667 3.17 0.46 45.49 5.25
6639 8914 3.371063 CCCCACAAGCAGCAGCAG 61.371 66.667 3.17 0.00 45.49 4.24
6640 8915 3.855503 CTCCCCACAAGCAGCAGCA 62.856 63.158 3.17 0.00 45.49 4.41
6641 8916 3.060615 CTCCCCACAAGCAGCAGC 61.061 66.667 0.00 0.00 42.56 5.25
6642 8917 3.060615 GCTCCCCACAAGCAGCAG 61.061 66.667 0.00 0.00 39.61 4.24
6643 8918 3.888460 TGCTCCCCACAAGCAGCA 61.888 61.111 0.00 0.00 44.51 4.41
6647 8922 2.353610 CCCATTGCTCCCCACAAGC 61.354 63.158 0.00 0.00 40.26 4.01
6648 8923 1.683365 CCCCATTGCTCCCCACAAG 60.683 63.158 0.00 0.00 0.00 3.16
6649 8924 2.153898 CTCCCCATTGCTCCCCACAA 62.154 60.000 0.00 0.00 0.00 3.33
6650 8925 2.534011 TCCCCATTGCTCCCCACA 60.534 61.111 0.00 0.00 0.00 4.17
6651 8926 2.276740 CTCCCCATTGCTCCCCAC 59.723 66.667 0.00 0.00 0.00 4.61
6652 8927 3.743017 GCTCCCCATTGCTCCCCA 61.743 66.667 0.00 0.00 0.00 4.96
6653 8928 3.728292 CTGCTCCCCATTGCTCCCC 62.728 68.421 0.00 0.00 0.00 4.81
6654 8929 2.123982 CTGCTCCCCATTGCTCCC 60.124 66.667 0.00 0.00 0.00 4.30
6655 8930 2.832201 GCTGCTCCCCATTGCTCC 60.832 66.667 0.00 0.00 0.00 4.70
6656 8931 1.664321 CTTGCTGCTCCCCATTGCTC 61.664 60.000 0.00 0.00 0.00 4.26
6657 8932 1.681327 CTTGCTGCTCCCCATTGCT 60.681 57.895 0.00 0.00 0.00 3.91
6658 8933 2.890371 CTTGCTGCTCCCCATTGC 59.110 61.111 0.00 0.00 0.00 3.56
6659 8934 2.890371 GCTTGCTGCTCCCCATTG 59.110 61.111 0.00 0.00 38.95 2.82
6660 8935 2.753043 CGCTTGCTGCTCCCCATT 60.753 61.111 0.00 0.00 40.11 3.16
6688 8963 4.079850 ACCTGCAGCTCTCTGGCG 62.080 66.667 8.66 0.00 40.65 5.69
6689 8964 2.436292 CACCTGCAGCTCTCTGGC 60.436 66.667 8.66 0.00 40.65 4.85
6690 8965 2.436292 GCACCTGCAGCTCTCTGG 60.436 66.667 8.66 0.00 40.65 3.86
6691 8966 2.814341 CGCACCTGCAGCTCTCTG 60.814 66.667 8.66 0.00 42.21 3.35
6692 8967 4.079850 CCGCACCTGCAGCTCTCT 62.080 66.667 8.66 0.00 42.21 3.10
6708 8983 3.606065 CTTGCTGCTGCTCGTTGCC 62.606 63.158 17.00 0.00 42.00 4.52
6709 8984 2.126965 CTTGCTGCTGCTCGTTGC 60.127 61.111 17.00 0.00 40.48 4.17
6710 8985 2.256591 ACCTTGCTGCTGCTCGTTG 61.257 57.895 17.00 3.78 40.48 4.10
6711 8986 2.111878 ACCTTGCTGCTGCTCGTT 59.888 55.556 17.00 0.00 40.48 3.85
6712 8987 2.667536 CACCTTGCTGCTGCTCGT 60.668 61.111 17.00 6.99 40.48 4.18
6713 8988 4.099170 GCACCTTGCTGCTGCTCG 62.099 66.667 17.00 7.34 40.96 5.03
6714 8989 2.979197 CTGCACCTTGCTGCTGCTC 61.979 63.158 17.00 0.00 45.31 4.26
6715 8990 2.984155 CTGCACCTTGCTGCTGCT 60.984 61.111 17.00 0.00 45.31 4.24
6738 9013 3.730761 CACGTTGCTGCTGCTCCC 61.731 66.667 17.00 3.70 40.48 4.30
6739 9014 4.395583 GCACGTTGCTGCTGCTCC 62.396 66.667 17.00 6.11 40.96 4.70
6740 9015 4.731503 CGCACGTTGCTGCTGCTC 62.732 66.667 17.00 8.86 42.25 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.