Multiple sequence alignment - TraesCS4B01G194300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G194300 chr4B 100.000 2357 0 0 1 2357 417553089 417550733 0.000000e+00 4353.0
1 TraesCS4B01G194300 chr4B 94.876 644 31 2 1714 2357 261474983 261475624 0.000000e+00 1005.0
2 TraesCS4B01G194300 chr1D 97.423 776 20 0 628 1403 247505757 247504982 0.000000e+00 1323.0
3 TraesCS4B01G194300 chr1D 97.297 777 19 2 628 1403 60171815 60171040 0.000000e+00 1317.0
4 TraesCS4B01G194300 chr1D 97.294 776 21 0 628 1403 205134696 205133921 0.000000e+00 1317.0
5 TraesCS4B01G194300 chr1D 76.427 543 98 23 2 522 415455212 415455746 1.390000e-67 267.0
6 TraesCS4B01G194300 chr2D 97.165 776 22 0 628 1403 73126871 73126096 0.000000e+00 1312.0
7 TraesCS4B01G194300 chr2D 96.782 777 24 1 628 1403 621748803 621749579 0.000000e+00 1295.0
8 TraesCS4B01G194300 chr2D 76.258 497 85 23 28 499 55609389 55608901 1.410000e-57 233.0
9 TraesCS4B01G194300 chr2D 75.787 413 78 17 135 528 137584241 137583832 3.090000e-44 189.0
10 TraesCS4B01G194300 chr3D 96.887 771 24 0 633 1403 613711276 613712046 0.000000e+00 1291.0
11 TraesCS4B01G194300 chr3D 96.521 776 27 0 628 1403 584701391 584700616 0.000000e+00 1284.0
12 TraesCS4B01G194300 chr7B 96.649 776 25 1 628 1403 720163388 720162614 0.000000e+00 1288.0
13 TraesCS4B01G194300 chr7B 80.769 234 40 5 228 459 36891074 36891304 6.690000e-41 178.0
14 TraesCS4B01G194300 chr7D 96.636 773 26 0 631 1403 485220893 485220121 0.000000e+00 1284.0
15 TraesCS4B01G194300 chr7D 84.211 95 13 2 530 623 88890818 88890911 8.970000e-15 91.6
16 TraesCS4B01G194300 chr2A 97.360 644 16 1 1714 2357 389189804 389190446 0.000000e+00 1094.0
17 TraesCS4B01G194300 chr2A 78.339 277 53 6 236 509 431072921 431073193 3.110000e-39 172.0
18 TraesCS4B01G194300 chr2B 96.183 655 18 2 1710 2357 772256316 772255662 0.000000e+00 1064.0
19 TraesCS4B01G194300 chr3B 96.012 652 19 2 1713 2357 462492805 462493456 0.000000e+00 1053.0
20 TraesCS4B01G194300 chr6A 95.406 653 20 3 1712 2357 40647609 40646960 0.000000e+00 1031.0
21 TraesCS4B01G194300 chr3A 95.137 658 19 4 1710 2357 42792457 42791803 0.000000e+00 1026.0
22 TraesCS4B01G194300 chr4A 95.312 640 20 3 1714 2346 591564521 591563885 0.000000e+00 1007.0
23 TraesCS4B01G194300 chr4A 87.266 534 47 11 1 515 133724213 133724744 7.260000e-165 590.0
24 TraesCS4B01G194300 chr4A 77.543 521 87 21 5 500 500126667 500127182 1.070000e-73 287.0
25 TraesCS4B01G194300 chr7A 95.194 645 15 5 1720 2357 724112004 724111369 0.000000e+00 1005.0
26 TraesCS4B01G194300 chr7A 73.783 534 108 24 1 509 68769121 68769647 5.170000e-42 182.0
27 TraesCS4B01G194300 chr5A 94.548 642 19 7 1714 2346 624962942 624962308 0.000000e+00 977.0
28 TraesCS4B01G194300 chr5A 79.303 459 76 15 86 527 662354656 662355112 1.060000e-78 303.0
29 TraesCS4B01G194300 chr5A 82.000 250 41 4 262 509 326281988 326282235 2.370000e-50 209.0
30 TraesCS4B01G194300 chr5D 75.824 546 107 21 1 525 255977658 255978199 1.080000e-63 254.0
31 TraesCS4B01G194300 chr5D 81.000 100 18 1 530 628 397321962 397321863 6.980000e-11 78.7
32 TraesCS4B01G194300 chr6D 90.698 43 1 3 530 572 412723799 412723760 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G194300 chr4B 417550733 417553089 2356 True 4353 4353 100.000 1 2357 1 chr4B.!!$R1 2356
1 TraesCS4B01G194300 chr4B 261474983 261475624 641 False 1005 1005 94.876 1714 2357 1 chr4B.!!$F1 643
2 TraesCS4B01G194300 chr1D 247504982 247505757 775 True 1323 1323 97.423 628 1403 1 chr1D.!!$R3 775
3 TraesCS4B01G194300 chr1D 60171040 60171815 775 True 1317 1317 97.297 628 1403 1 chr1D.!!$R1 775
4 TraesCS4B01G194300 chr1D 205133921 205134696 775 True 1317 1317 97.294 628 1403 1 chr1D.!!$R2 775
5 TraesCS4B01G194300 chr1D 415455212 415455746 534 False 267 267 76.427 2 522 1 chr1D.!!$F1 520
6 TraesCS4B01G194300 chr2D 73126096 73126871 775 True 1312 1312 97.165 628 1403 1 chr2D.!!$R2 775
7 TraesCS4B01G194300 chr2D 621748803 621749579 776 False 1295 1295 96.782 628 1403 1 chr2D.!!$F1 775
8 TraesCS4B01G194300 chr3D 613711276 613712046 770 False 1291 1291 96.887 633 1403 1 chr3D.!!$F1 770
9 TraesCS4B01G194300 chr3D 584700616 584701391 775 True 1284 1284 96.521 628 1403 1 chr3D.!!$R1 775
10 TraesCS4B01G194300 chr7B 720162614 720163388 774 True 1288 1288 96.649 628 1403 1 chr7B.!!$R1 775
11 TraesCS4B01G194300 chr7D 485220121 485220893 772 True 1284 1284 96.636 631 1403 1 chr7D.!!$R1 772
12 TraesCS4B01G194300 chr2A 389189804 389190446 642 False 1094 1094 97.360 1714 2357 1 chr2A.!!$F1 643
13 TraesCS4B01G194300 chr2B 772255662 772256316 654 True 1064 1064 96.183 1710 2357 1 chr2B.!!$R1 647
14 TraesCS4B01G194300 chr3B 462492805 462493456 651 False 1053 1053 96.012 1713 2357 1 chr3B.!!$F1 644
15 TraesCS4B01G194300 chr6A 40646960 40647609 649 True 1031 1031 95.406 1712 2357 1 chr6A.!!$R1 645
16 TraesCS4B01G194300 chr3A 42791803 42792457 654 True 1026 1026 95.137 1710 2357 1 chr3A.!!$R1 647
17 TraesCS4B01G194300 chr4A 591563885 591564521 636 True 1007 1007 95.312 1714 2346 1 chr4A.!!$R1 632
18 TraesCS4B01G194300 chr4A 133724213 133724744 531 False 590 590 87.266 1 515 1 chr4A.!!$F1 514
19 TraesCS4B01G194300 chr4A 500126667 500127182 515 False 287 287 77.543 5 500 1 chr4A.!!$F2 495
20 TraesCS4B01G194300 chr7A 724111369 724112004 635 True 1005 1005 95.194 1720 2357 1 chr7A.!!$R1 637
21 TraesCS4B01G194300 chr5A 624962308 624962942 634 True 977 977 94.548 1714 2346 1 chr5A.!!$R1 632
22 TraesCS4B01G194300 chr5D 255977658 255978199 541 False 254 254 75.824 1 525 1 chr5D.!!$F1 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
543 577 0.034059 GCGATAGGAGGGTGTGGATG 59.966 60.0 0.0 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1549 1585 0.036388 GCCGACCCTCAAATCACTCA 60.036 55.0 0.0 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 8.457238 AAGAAGAAGCAAAACTTATGAACTCT 57.543 30.769 0.00 0.00 39.29 3.24
64 73 1.262417 TGAACTCTATGGTGGTCGCA 58.738 50.000 0.00 0.00 0.00 5.10
80 89 1.510383 GCACGCAATGGCCACATTA 59.490 52.632 8.16 0.00 45.24 1.90
117 127 2.945008 CCGCACCACAATACTTCATGAT 59.055 45.455 0.00 0.00 0.00 2.45
121 131 4.158394 GCACCACAATACTTCATGATGGTT 59.842 41.667 11.37 4.43 36.85 3.67
141 152 1.634960 TTCTGGACGGTGTACCATCA 58.365 50.000 0.00 0.00 35.54 3.07
162 173 9.599866 CCATCAATACACTAAGAACTTGATACA 57.400 33.333 0.00 0.00 33.00 2.29
216 229 4.730324 GCAATGTGTTTTGCCAAAAGAACC 60.730 41.667 2.15 0.00 44.94 3.62
217 230 2.979240 TGTGTTTTGCCAAAAGAACCC 58.021 42.857 2.15 0.00 0.00 4.11
218 231 2.285083 GTGTTTTGCCAAAAGAACCCC 58.715 47.619 2.15 0.00 0.00 4.95
275 307 0.934496 CATATACGGCCAACCACACG 59.066 55.000 2.24 0.00 34.57 4.49
416 450 0.740868 CCACCATGAACAGCGTCGAT 60.741 55.000 0.00 0.00 0.00 3.59
436 470 2.750350 GGGGGCGGATGATACCTG 59.250 66.667 0.00 0.00 0.00 4.00
437 471 2.750350 GGGGCGGATGATACCTGG 59.250 66.667 0.00 0.00 0.00 4.45
438 472 2.032681 GGGCGGATGATACCTGGC 59.967 66.667 0.00 0.00 0.00 4.85
439 473 2.520536 GGGCGGATGATACCTGGCT 61.521 63.158 0.00 0.00 32.92 4.75
440 474 1.302033 GGCGGATGATACCTGGCTG 60.302 63.158 0.00 0.00 0.00 4.85
441 475 1.963338 GCGGATGATACCTGGCTGC 60.963 63.158 0.00 0.00 0.00 5.25
442 476 1.665916 CGGATGATACCTGGCTGCG 60.666 63.158 0.00 0.00 0.00 5.18
443 477 1.302033 GGATGATACCTGGCTGCGG 60.302 63.158 0.00 0.00 0.00 5.69
444 478 1.748403 GATGATACCTGGCTGCGGA 59.252 57.895 0.00 0.00 0.00 5.54
445 479 0.601311 GATGATACCTGGCTGCGGAC 60.601 60.000 0.00 0.00 0.00 4.79
446 480 2.279517 GATACCTGGCTGCGGACG 60.280 66.667 0.00 0.00 0.00 4.79
447 481 3.792053 GATACCTGGCTGCGGACGG 62.792 68.421 0.00 0.00 0.00 4.79
450 484 4.899239 CCTGGCTGCGGACGGATC 62.899 72.222 9.49 0.00 0.00 3.36
451 485 4.899239 CTGGCTGCGGACGGATCC 62.899 72.222 0.00 0.00 42.28 3.36
453 487 4.899239 GGCTGCGGACGGATCCTG 62.899 72.222 10.75 6.11 43.73 3.86
454 488 4.899239 GCTGCGGACGGATCCTGG 62.899 72.222 10.75 0.00 43.73 4.45
455 489 3.461773 CTGCGGACGGATCCTGGT 61.462 66.667 10.75 0.24 43.73 4.00
456 490 3.000819 TGCGGACGGATCCTGGTT 61.001 61.111 10.75 0.00 43.73 3.67
457 491 2.511600 GCGGACGGATCCTGGTTG 60.512 66.667 10.75 0.00 43.73 3.77
458 492 2.186903 CGGACGGATCCTGGTTGG 59.813 66.667 10.75 0.00 43.73 3.77
466 500 3.920817 TCCTGGTTGGATGGTGCT 58.079 55.556 0.00 0.00 40.56 4.40
467 501 1.379916 TCCTGGTTGGATGGTGCTG 59.620 57.895 0.00 0.00 40.56 4.41
468 502 1.075482 CCTGGTTGGATGGTGCTGT 59.925 57.895 0.00 0.00 38.35 4.40
469 503 0.540365 CCTGGTTGGATGGTGCTGTT 60.540 55.000 0.00 0.00 38.35 3.16
470 504 0.599558 CTGGTTGGATGGTGCTGTTG 59.400 55.000 0.00 0.00 0.00 3.33
471 505 0.106268 TGGTTGGATGGTGCTGTTGT 60.106 50.000 0.00 0.00 0.00 3.32
472 506 1.143889 TGGTTGGATGGTGCTGTTGTA 59.856 47.619 0.00 0.00 0.00 2.41
473 507 1.539827 GGTTGGATGGTGCTGTTGTAC 59.460 52.381 0.00 0.00 0.00 2.90
474 508 2.226330 GTTGGATGGTGCTGTTGTACA 58.774 47.619 0.00 0.00 0.00 2.90
475 509 2.621055 GTTGGATGGTGCTGTTGTACAA 59.379 45.455 3.59 3.59 0.00 2.41
476 510 2.503331 TGGATGGTGCTGTTGTACAAG 58.497 47.619 8.98 0.00 0.00 3.16
477 511 2.105649 TGGATGGTGCTGTTGTACAAGA 59.894 45.455 8.98 6.94 0.00 3.02
478 512 2.484264 GGATGGTGCTGTTGTACAAGAC 59.516 50.000 8.98 0.00 0.00 3.01
479 513 1.577468 TGGTGCTGTTGTACAAGACG 58.423 50.000 8.98 3.42 0.00 4.18
480 514 1.137282 TGGTGCTGTTGTACAAGACGA 59.863 47.619 8.98 0.00 0.00 4.20
481 515 1.792949 GGTGCTGTTGTACAAGACGAG 59.207 52.381 8.98 4.21 0.00 4.18
482 516 2.470821 GTGCTGTTGTACAAGACGAGT 58.529 47.619 8.98 0.00 0.00 4.18
483 517 2.218759 GTGCTGTTGTACAAGACGAGTG 59.781 50.000 8.98 0.00 0.00 3.51
484 518 1.792949 GCTGTTGTACAAGACGAGTGG 59.207 52.381 8.98 0.00 0.00 4.00
485 519 2.404215 CTGTTGTACAAGACGAGTGGG 58.596 52.381 8.98 0.00 0.00 4.61
486 520 1.758280 TGTTGTACAAGACGAGTGGGT 59.242 47.619 8.98 0.00 0.00 4.51
487 521 2.132762 GTTGTACAAGACGAGTGGGTG 58.867 52.381 8.98 0.00 0.00 4.61
488 522 1.405872 TGTACAAGACGAGTGGGTGT 58.594 50.000 0.00 0.00 0.00 4.16
489 523 1.067974 TGTACAAGACGAGTGGGTGTG 59.932 52.381 0.00 0.00 0.00 3.82
490 524 1.068127 GTACAAGACGAGTGGGTGTGT 59.932 52.381 0.00 0.00 0.00 3.72
491 525 0.179084 ACAAGACGAGTGGGTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
492 526 0.880278 CAAGACGAGTGGGTGTGTGG 60.880 60.000 0.00 0.00 0.00 4.17
493 527 2.030562 GACGAGTGGGTGTGTGGG 59.969 66.667 0.00 0.00 0.00 4.61
494 528 2.766651 ACGAGTGGGTGTGTGGGT 60.767 61.111 0.00 0.00 0.00 4.51
495 529 2.280797 CGAGTGGGTGTGTGGGTG 60.281 66.667 0.00 0.00 0.00 4.61
496 530 2.915869 GAGTGGGTGTGTGGGTGT 59.084 61.111 0.00 0.00 0.00 4.16
497 531 1.525995 GAGTGGGTGTGTGGGTGTG 60.526 63.158 0.00 0.00 0.00 3.82
498 532 2.518349 GTGGGTGTGTGGGTGTGG 60.518 66.667 0.00 0.00 0.00 4.17
499 533 3.814906 TGGGTGTGTGGGTGTGGG 61.815 66.667 0.00 0.00 0.00 4.61
500 534 3.816090 GGGTGTGTGGGTGTGGGT 61.816 66.667 0.00 0.00 0.00 4.51
501 535 2.277404 GGTGTGTGGGTGTGGGTT 59.723 61.111 0.00 0.00 0.00 4.11
502 536 2.124693 GGTGTGTGGGTGTGGGTTG 61.125 63.158 0.00 0.00 0.00 3.77
503 537 2.441164 TGTGTGGGTGTGGGTTGC 60.441 61.111 0.00 0.00 0.00 4.17
504 538 3.591835 GTGTGGGTGTGGGTTGCG 61.592 66.667 0.00 0.00 0.00 4.85
505 539 4.885270 TGTGGGTGTGGGTTGCGG 62.885 66.667 0.00 0.00 0.00 5.69
506 540 4.572571 GTGGGTGTGGGTTGCGGA 62.573 66.667 0.00 0.00 0.00 5.54
507 541 4.572571 TGGGTGTGGGTTGCGGAC 62.573 66.667 0.00 0.00 0.00 4.79
515 549 4.397832 GGTTGCGGACGCCCCTTA 62.398 66.667 14.61 0.00 41.09 2.69
516 550 2.358984 GTTGCGGACGCCCCTTAA 60.359 61.111 14.61 0.00 41.09 1.85
517 551 1.747745 GTTGCGGACGCCCCTTAAT 60.748 57.895 14.61 0.00 41.09 1.40
518 552 1.747367 TTGCGGACGCCCCTTAATG 60.747 57.895 14.61 0.00 41.09 1.90
519 553 3.583086 GCGGACGCCCCTTAATGC 61.583 66.667 5.20 0.00 34.56 3.56
520 554 2.900337 CGGACGCCCCTTAATGCC 60.900 66.667 0.00 0.00 0.00 4.40
521 555 2.595655 GGACGCCCCTTAATGCCT 59.404 61.111 0.00 0.00 0.00 4.75
522 556 1.823899 GGACGCCCCTTAATGCCTG 60.824 63.158 0.00 0.00 0.00 4.85
523 557 1.823899 GACGCCCCTTAATGCCTGG 60.824 63.158 0.00 0.00 0.00 4.45
524 558 2.519302 CGCCCCTTAATGCCTGGG 60.519 66.667 0.00 0.00 41.23 4.45
526 560 2.519302 CCCCTTAATGCCTGGGCG 60.519 66.667 7.14 0.00 45.51 6.13
527 561 2.595095 CCCTTAATGCCTGGGCGA 59.405 61.111 7.14 0.00 45.51 5.54
528 562 1.151450 CCCTTAATGCCTGGGCGAT 59.849 57.895 7.14 0.98 45.51 4.58
529 563 0.400213 CCCTTAATGCCTGGGCGATA 59.600 55.000 7.14 0.02 45.51 2.92
530 564 1.611673 CCCTTAATGCCTGGGCGATAG 60.612 57.143 7.14 2.23 45.51 2.08
531 565 1.611673 CCTTAATGCCTGGGCGATAGG 60.612 57.143 7.14 7.19 45.51 2.57
532 566 1.347707 CTTAATGCCTGGGCGATAGGA 59.652 52.381 7.14 0.00 45.51 2.94
533 567 0.976641 TAATGCCTGGGCGATAGGAG 59.023 55.000 7.14 0.00 45.51 3.69
534 568 1.772819 AATGCCTGGGCGATAGGAGG 61.773 60.000 7.14 0.00 45.51 4.30
535 569 3.631046 GCCTGGGCGATAGGAGGG 61.631 72.222 5.40 0.00 37.52 4.30
536 570 2.122813 CCTGGGCGATAGGAGGGT 60.123 66.667 0.00 0.00 37.52 4.34
537 571 2.511452 CCTGGGCGATAGGAGGGTG 61.511 68.421 0.00 0.00 37.52 4.61
538 572 1.762460 CTGGGCGATAGGAGGGTGT 60.762 63.158 0.00 0.00 0.00 4.16
539 573 2.032860 CTGGGCGATAGGAGGGTGTG 62.033 65.000 0.00 0.00 0.00 3.82
540 574 2.808206 GGGCGATAGGAGGGTGTGG 61.808 68.421 0.00 0.00 0.00 4.17
541 575 1.760875 GGCGATAGGAGGGTGTGGA 60.761 63.158 0.00 0.00 0.00 4.02
542 576 1.122019 GGCGATAGGAGGGTGTGGAT 61.122 60.000 0.00 0.00 0.00 3.41
543 577 0.034059 GCGATAGGAGGGTGTGGATG 59.966 60.000 0.00 0.00 0.00 3.51
544 578 0.034059 CGATAGGAGGGTGTGGATGC 59.966 60.000 0.00 0.00 0.00 3.91
545 579 1.131638 GATAGGAGGGTGTGGATGCA 58.868 55.000 0.00 0.00 0.00 3.96
546 580 1.490490 GATAGGAGGGTGTGGATGCAA 59.510 52.381 0.00 0.00 0.00 4.08
547 581 1.367346 TAGGAGGGTGTGGATGCAAA 58.633 50.000 0.00 0.00 0.00 3.68
548 582 0.038744 AGGAGGGTGTGGATGCAAAG 59.961 55.000 0.00 0.00 0.00 2.77
549 583 0.251341 GGAGGGTGTGGATGCAAAGT 60.251 55.000 0.00 0.00 0.00 2.66
550 584 1.004277 GGAGGGTGTGGATGCAAAGTA 59.996 52.381 0.00 0.00 0.00 2.24
551 585 2.554344 GGAGGGTGTGGATGCAAAGTAA 60.554 50.000 0.00 0.00 0.00 2.24
552 586 2.749621 GAGGGTGTGGATGCAAAGTAAG 59.250 50.000 0.00 0.00 0.00 2.34
553 587 1.818674 GGGTGTGGATGCAAAGTAAGG 59.181 52.381 0.00 0.00 0.00 2.69
554 588 1.818674 GGTGTGGATGCAAAGTAAGGG 59.181 52.381 0.00 0.00 0.00 3.95
555 589 1.818674 GTGTGGATGCAAAGTAAGGGG 59.181 52.381 0.00 0.00 0.00 4.79
556 590 1.272425 TGTGGATGCAAAGTAAGGGGG 60.272 52.381 0.00 0.00 0.00 5.40
557 591 0.324275 TGGATGCAAAGTAAGGGGGC 60.324 55.000 0.00 0.00 0.00 5.80
558 592 0.324275 GGATGCAAAGTAAGGGGGCA 60.324 55.000 0.00 0.00 39.03 5.36
559 593 1.106285 GATGCAAAGTAAGGGGGCAG 58.894 55.000 0.00 0.00 37.96 4.85
560 594 0.324645 ATGCAAAGTAAGGGGGCAGG 60.325 55.000 0.00 0.00 37.96 4.85
561 595 1.682344 GCAAAGTAAGGGGGCAGGG 60.682 63.158 0.00 0.00 0.00 4.45
562 596 2.083715 CAAAGTAAGGGGGCAGGGA 58.916 57.895 0.00 0.00 0.00 4.20
563 597 0.323451 CAAAGTAAGGGGGCAGGGAC 60.323 60.000 0.00 0.00 0.00 4.46
564 598 0.774491 AAAGTAAGGGGGCAGGGACA 60.774 55.000 0.00 0.00 0.00 4.02
565 599 1.208165 AAGTAAGGGGGCAGGGACAG 61.208 60.000 0.00 0.00 0.00 3.51
566 600 1.615424 GTAAGGGGGCAGGGACAGA 60.615 63.158 0.00 0.00 0.00 3.41
567 601 1.306997 TAAGGGGGCAGGGACAGAG 60.307 63.158 0.00 0.00 0.00 3.35
568 602 2.119847 TAAGGGGGCAGGGACAGAGT 62.120 60.000 0.00 0.00 0.00 3.24
569 603 3.721706 GGGGGCAGGGACAGAGTG 61.722 72.222 0.00 0.00 0.00 3.51
570 604 3.721706 GGGGCAGGGACAGAGTGG 61.722 72.222 0.00 0.00 0.00 4.00
571 605 2.607750 GGGCAGGGACAGAGTGGA 60.608 66.667 0.00 0.00 0.00 4.02
572 606 2.224159 GGGCAGGGACAGAGTGGAA 61.224 63.158 0.00 0.00 0.00 3.53
573 607 1.298014 GGCAGGGACAGAGTGGAAG 59.702 63.158 0.00 0.00 0.00 3.46
574 608 1.194781 GGCAGGGACAGAGTGGAAGA 61.195 60.000 0.00 0.00 0.00 2.87
575 609 0.248843 GCAGGGACAGAGTGGAAGAG 59.751 60.000 0.00 0.00 0.00 2.85
576 610 1.930251 CAGGGACAGAGTGGAAGAGA 58.070 55.000 0.00 0.00 0.00 3.10
577 611 2.251818 CAGGGACAGAGTGGAAGAGAA 58.748 52.381 0.00 0.00 0.00 2.87
578 612 2.836981 CAGGGACAGAGTGGAAGAGAAT 59.163 50.000 0.00 0.00 0.00 2.40
579 613 2.836981 AGGGACAGAGTGGAAGAGAATG 59.163 50.000 0.00 0.00 0.00 2.67
580 614 2.093235 GGGACAGAGTGGAAGAGAATGG 60.093 54.545 0.00 0.00 0.00 3.16
581 615 2.093235 GGACAGAGTGGAAGAGAATGGG 60.093 54.545 0.00 0.00 0.00 4.00
582 616 2.834549 GACAGAGTGGAAGAGAATGGGA 59.165 50.000 0.00 0.00 0.00 4.37
583 617 2.569404 ACAGAGTGGAAGAGAATGGGAC 59.431 50.000 0.00 0.00 0.00 4.46
584 618 2.836981 CAGAGTGGAAGAGAATGGGACT 59.163 50.000 0.00 0.00 0.00 3.85
585 619 2.836981 AGAGTGGAAGAGAATGGGACTG 59.163 50.000 0.00 0.00 0.00 3.51
586 620 1.912043 AGTGGAAGAGAATGGGACTGG 59.088 52.381 0.00 0.00 0.00 4.00
587 621 1.909302 GTGGAAGAGAATGGGACTGGA 59.091 52.381 0.00 0.00 0.00 3.86
588 622 2.305927 GTGGAAGAGAATGGGACTGGAA 59.694 50.000 0.00 0.00 0.00 3.53
589 623 2.573462 TGGAAGAGAATGGGACTGGAAG 59.427 50.000 0.00 0.00 42.29 3.46
590 624 2.840651 GGAAGAGAATGGGACTGGAAGA 59.159 50.000 0.00 0.00 37.43 2.87
591 625 3.264450 GGAAGAGAATGGGACTGGAAGAA 59.736 47.826 0.00 0.00 37.43 2.52
592 626 4.080072 GGAAGAGAATGGGACTGGAAGAAT 60.080 45.833 0.00 0.00 37.43 2.40
593 627 5.131142 GGAAGAGAATGGGACTGGAAGAATA 59.869 44.000 0.00 0.00 37.43 1.75
594 628 6.353082 GGAAGAGAATGGGACTGGAAGAATAA 60.353 42.308 0.00 0.00 37.43 1.40
595 629 6.838401 AGAGAATGGGACTGGAAGAATAAT 57.162 37.500 0.00 0.00 37.43 1.28
596 630 7.218314 AGAGAATGGGACTGGAAGAATAATT 57.782 36.000 0.00 0.00 37.43 1.40
597 631 7.646884 AGAGAATGGGACTGGAAGAATAATTT 58.353 34.615 0.00 0.00 37.43 1.82
598 632 7.559170 AGAGAATGGGACTGGAAGAATAATTTG 59.441 37.037 0.00 0.00 37.43 2.32
599 633 7.413446 AGAATGGGACTGGAAGAATAATTTGA 58.587 34.615 0.00 0.00 37.43 2.69
600 634 7.559170 AGAATGGGACTGGAAGAATAATTTGAG 59.441 37.037 0.00 0.00 37.43 3.02
601 635 6.139679 TGGGACTGGAAGAATAATTTGAGT 57.860 37.500 0.00 0.00 37.43 3.41
602 636 7.265599 TGGGACTGGAAGAATAATTTGAGTA 57.734 36.000 0.00 0.00 37.43 2.59
603 637 7.338710 TGGGACTGGAAGAATAATTTGAGTAG 58.661 38.462 0.00 0.00 37.43 2.57
604 638 6.768381 GGGACTGGAAGAATAATTTGAGTAGG 59.232 42.308 0.00 0.00 37.43 3.18
605 639 6.261158 GGACTGGAAGAATAATTTGAGTAGGC 59.739 42.308 0.00 0.00 37.43 3.93
606 640 6.122964 ACTGGAAGAATAATTTGAGTAGGCC 58.877 40.000 0.00 0.00 37.43 5.19
607 641 5.445964 TGGAAGAATAATTTGAGTAGGCCC 58.554 41.667 0.00 0.00 0.00 5.80
608 642 4.515567 GGAAGAATAATTTGAGTAGGCCCG 59.484 45.833 0.00 0.00 0.00 6.13
609 643 4.086706 AGAATAATTTGAGTAGGCCCGG 57.913 45.455 0.00 0.00 0.00 5.73
610 644 2.951229 ATAATTTGAGTAGGCCCGGG 57.049 50.000 19.09 19.09 0.00 5.73
611 645 0.841289 TAATTTGAGTAGGCCCGGGG 59.159 55.000 25.28 9.31 0.00 5.73
612 646 1.212250 AATTTGAGTAGGCCCGGGGT 61.212 55.000 25.28 0.00 0.00 4.95
613 647 1.921869 ATTTGAGTAGGCCCGGGGTG 61.922 60.000 25.28 0.00 0.00 4.61
614 648 3.857521 TTGAGTAGGCCCGGGGTGT 62.858 63.158 25.28 4.66 0.00 4.16
615 649 3.468140 GAGTAGGCCCGGGGTGTC 61.468 72.222 25.28 4.65 0.00 3.67
624 658 2.044650 CGGGGTGTCGGAGTCCTA 60.045 66.667 7.77 0.00 0.00 2.94
625 659 2.413142 CGGGGTGTCGGAGTCCTAC 61.413 68.421 7.77 7.30 0.00 3.18
626 660 2.413142 GGGGTGTCGGAGTCCTACG 61.413 68.421 7.77 0.00 38.52 3.51
732 766 8.828688 AAAGACCTTACAAAGTAGTACATCAC 57.171 34.615 2.52 0.00 0.00 3.06
806 840 1.302431 CAGTGGTGCCGAATGTCCA 60.302 57.895 0.00 0.00 0.00 4.02
878 912 1.734655 CCCCATCCTAGCCACATACT 58.265 55.000 0.00 0.00 0.00 2.12
923 957 4.007644 CACTCACCGAGGCTGCCA 62.008 66.667 22.65 0.00 33.35 4.92
1026 1061 0.965866 CAGACAGCTCGACCACCCTA 60.966 60.000 0.00 0.00 0.00 3.53
1190 1225 1.842562 CCATCCACAACATCTCTCCCT 59.157 52.381 0.00 0.00 0.00 4.20
1197 1232 2.632996 ACAACATCTCTCCCTCGAACAA 59.367 45.455 0.00 0.00 0.00 2.83
1267 1302 4.569180 CCGCCGCCCAATCCAGAT 62.569 66.667 0.00 0.00 0.00 2.90
1403 1439 1.001181 CGACCAAAGTTTCCTCCGGTA 59.999 52.381 0.00 0.00 0.00 4.02
1404 1440 2.420642 GACCAAAGTTTCCTCCGGTAC 58.579 52.381 0.00 0.00 0.00 3.34
1417 1453 4.994744 GGTACGTAGCGGTGGTTT 57.005 55.556 9.30 0.00 0.00 3.27
1418 1454 2.448477 GGTACGTAGCGGTGGTTTG 58.552 57.895 9.30 0.00 0.00 2.93
1419 1455 1.015607 GGTACGTAGCGGTGGTTTGG 61.016 60.000 9.30 0.00 0.00 3.28
1420 1456 1.015607 GTACGTAGCGGTGGTTTGGG 61.016 60.000 0.00 0.00 0.00 4.12
1421 1457 2.784889 TACGTAGCGGTGGTTTGGGC 62.785 60.000 0.00 0.00 0.00 5.36
1422 1458 2.033602 GTAGCGGTGGTTTGGGCT 59.966 61.111 0.00 0.00 39.44 5.19
1423 1459 1.602605 GTAGCGGTGGTTTGGGCTT 60.603 57.895 0.00 0.00 36.97 4.35
1424 1460 1.302993 TAGCGGTGGTTTGGGCTTC 60.303 57.895 0.00 0.00 36.97 3.86
1425 1461 2.757980 TAGCGGTGGTTTGGGCTTCC 62.758 60.000 0.00 0.00 36.97 3.46
1426 1462 3.361977 CGGTGGTTTGGGCTTCCG 61.362 66.667 0.00 0.00 0.00 4.30
1427 1463 3.680786 GGTGGTTTGGGCTTCCGC 61.681 66.667 0.00 0.00 0.00 5.54
1428 1464 2.909965 GTGGTTTGGGCTTCCGCA 60.910 61.111 0.00 0.00 38.10 5.69
1429 1465 2.123683 TGGTTTGGGCTTCCGCAA 60.124 55.556 0.00 0.00 41.47 4.85
1432 1468 3.133946 TTTGGGCTTCCGCAAACC 58.866 55.556 2.38 0.00 45.39 3.27
1433 1469 1.758514 TTTGGGCTTCCGCAAACCA 60.759 52.632 2.38 0.00 45.39 3.67
1434 1470 2.022240 TTTGGGCTTCCGCAAACCAC 62.022 55.000 2.38 0.00 45.39 4.16
1435 1471 2.909965 GGGCTTCCGCAAACCACA 60.910 61.111 0.00 0.00 38.10 4.17
1436 1472 2.335011 GGCTTCCGCAAACCACAC 59.665 61.111 0.00 0.00 38.10 3.82
1437 1473 2.335011 GCTTCCGCAAACCACACC 59.665 61.111 0.00 0.00 35.78 4.16
1438 1474 3.039134 CTTCCGCAAACCACACCC 58.961 61.111 0.00 0.00 0.00 4.61
1439 1475 2.519780 TTCCGCAAACCACACCCC 60.520 61.111 0.00 0.00 0.00 4.95
1440 1476 4.589675 TCCGCAAACCACACCCCC 62.590 66.667 0.00 0.00 0.00 5.40
1443 1479 2.835895 GCAAACCACACCCCCGTT 60.836 61.111 0.00 0.00 0.00 4.44
1444 1480 2.428085 GCAAACCACACCCCCGTTT 61.428 57.895 0.00 0.00 0.00 3.60
1445 1481 1.962321 GCAAACCACACCCCCGTTTT 61.962 55.000 0.00 0.00 0.00 2.43
1446 1482 0.179097 CAAACCACACCCCCGTTTTG 60.179 55.000 0.00 0.00 0.00 2.44
1447 1483 0.615261 AAACCACACCCCCGTTTTGT 60.615 50.000 0.00 0.00 0.00 2.83
1448 1484 0.615261 AACCACACCCCCGTTTTGTT 60.615 50.000 0.00 0.00 0.00 2.83
1449 1485 0.615261 ACCACACCCCCGTTTTGTTT 60.615 50.000 0.00 0.00 0.00 2.83
1450 1486 0.103390 CCACACCCCCGTTTTGTTTC 59.897 55.000 0.00 0.00 0.00 2.78
1451 1487 0.103390 CACACCCCCGTTTTGTTTCC 59.897 55.000 0.00 0.00 0.00 3.13
1452 1488 0.324460 ACACCCCCGTTTTGTTTCCA 60.324 50.000 0.00 0.00 0.00 3.53
1453 1489 0.824759 CACCCCCGTTTTGTTTCCAA 59.175 50.000 0.00 0.00 0.00 3.53
1454 1490 1.414550 CACCCCCGTTTTGTTTCCAAT 59.585 47.619 0.00 0.00 0.00 3.16
1455 1491 2.120312 ACCCCCGTTTTGTTTCCAATT 58.880 42.857 0.00 0.00 0.00 2.32
1456 1492 2.506231 ACCCCCGTTTTGTTTCCAATTT 59.494 40.909 0.00 0.00 0.00 1.82
1457 1493 3.135225 CCCCCGTTTTGTTTCCAATTTC 58.865 45.455 0.00 0.00 0.00 2.17
1458 1494 3.135225 CCCCGTTTTGTTTCCAATTTCC 58.865 45.455 0.00 0.00 0.00 3.13
1459 1495 2.797719 CCCGTTTTGTTTCCAATTTCCG 59.202 45.455 0.00 0.00 0.00 4.30
1460 1496 3.491104 CCCGTTTTGTTTCCAATTTCCGA 60.491 43.478 0.00 0.00 0.00 4.55
1461 1497 3.487942 CCGTTTTGTTTCCAATTTCCGAC 59.512 43.478 0.00 0.00 0.00 4.79
1462 1498 4.106197 CGTTTTGTTTCCAATTTCCGACA 58.894 39.130 0.00 0.00 0.00 4.35
1463 1499 4.206200 CGTTTTGTTTCCAATTTCCGACAG 59.794 41.667 0.00 0.00 0.00 3.51
1464 1500 5.344884 GTTTTGTTTCCAATTTCCGACAGA 58.655 37.500 0.00 0.00 0.00 3.41
1465 1501 5.584253 TTTGTTTCCAATTTCCGACAGAA 57.416 34.783 0.00 0.00 0.00 3.02
1474 1510 1.821216 TTCCGACAGAAATGGCTTCC 58.179 50.000 0.00 0.00 34.21 3.46
1475 1511 0.391130 TCCGACAGAAATGGCTTCCG 60.391 55.000 0.00 0.00 34.21 4.30
1476 1512 0.391130 CCGACAGAAATGGCTTCCGA 60.391 55.000 0.00 0.00 34.21 4.55
1477 1513 1.438651 CGACAGAAATGGCTTCCGAA 58.561 50.000 0.00 0.00 34.21 4.30
1478 1514 1.128692 CGACAGAAATGGCTTCCGAAC 59.871 52.381 0.00 0.00 34.21 3.95
1479 1515 1.468914 GACAGAAATGGCTTCCGAACC 59.531 52.381 0.00 0.00 34.21 3.62
1480 1516 0.447801 CAGAAATGGCTTCCGAACCG 59.552 55.000 0.00 0.00 34.21 4.44
1481 1517 1.136774 GAAATGGCTTCCGAACCGC 59.863 57.895 0.00 0.00 0.00 5.68
1482 1518 1.303317 AAATGGCTTCCGAACCGCT 60.303 52.632 0.00 0.00 0.00 5.52
1483 1519 1.305930 AAATGGCTTCCGAACCGCTC 61.306 55.000 0.00 0.00 0.00 5.03
1484 1520 3.682292 ATGGCTTCCGAACCGCTCC 62.682 63.158 0.00 0.00 0.00 4.70
1485 1521 4.388499 GGCTTCCGAACCGCTCCA 62.388 66.667 0.00 0.00 0.00 3.86
1486 1522 3.119096 GCTTCCGAACCGCTCCAC 61.119 66.667 0.00 0.00 0.00 4.02
1487 1523 2.342279 CTTCCGAACCGCTCCACA 59.658 61.111 0.00 0.00 0.00 4.17
1488 1524 1.738099 CTTCCGAACCGCTCCACAG 60.738 63.158 0.00 0.00 0.00 3.66
1489 1525 2.154798 CTTCCGAACCGCTCCACAGA 62.155 60.000 0.00 0.00 0.00 3.41
1490 1526 2.430382 TTCCGAACCGCTCCACAGAC 62.430 60.000 0.00 0.00 0.00 3.51
1491 1527 2.432628 CGAACCGCTCCACAGACC 60.433 66.667 0.00 0.00 0.00 3.85
1492 1528 2.432628 GAACCGCTCCACAGACCG 60.433 66.667 0.00 0.00 0.00 4.79
1493 1529 2.915659 AACCGCTCCACAGACCGA 60.916 61.111 0.00 0.00 0.00 4.69
1494 1530 2.227089 GAACCGCTCCACAGACCGAT 62.227 60.000 0.00 0.00 0.00 4.18
1495 1531 0.968901 AACCGCTCCACAGACCGATA 60.969 55.000 0.00 0.00 0.00 2.92
1496 1532 1.065928 CCGCTCCACAGACCGATAC 59.934 63.158 0.00 0.00 0.00 2.24
1497 1533 1.384989 CCGCTCCACAGACCGATACT 61.385 60.000 0.00 0.00 0.00 2.12
1498 1534 0.248661 CGCTCCACAGACCGATACTG 60.249 60.000 0.00 0.00 40.68 2.74
1499 1535 0.103208 GCTCCACAGACCGATACTGG 59.897 60.000 0.00 0.00 39.38 4.00
1500 1536 0.747255 CTCCACAGACCGATACTGGG 59.253 60.000 0.00 0.00 39.38 4.45
1502 1538 1.144057 CACAGACCGATACTGGGGC 59.856 63.158 0.00 0.00 39.38 5.80
1503 1539 2.417516 CAGACCGATACTGGGGCG 59.582 66.667 0.00 0.00 37.77 6.13
1504 1540 3.537874 AGACCGATACTGGGGCGC 61.538 66.667 0.00 0.00 37.77 6.53
1505 1541 4.944372 GACCGATACTGGGGCGCG 62.944 72.222 0.00 0.00 0.00 6.86
1513 1549 4.976925 CTGGGGCGCGCTGGATAG 62.977 72.222 32.29 17.55 0.00 2.08
1528 1564 5.389859 CTGGATAGCAAAACACATTTGGA 57.610 39.130 3.41 0.00 46.93 3.53
1529 1565 5.132897 TGGATAGCAAAACACATTTGGAC 57.867 39.130 3.41 0.00 46.93 4.02
1530 1566 4.021544 TGGATAGCAAAACACATTTGGACC 60.022 41.667 3.41 0.00 46.93 4.46
1531 1567 4.021544 GGATAGCAAAACACATTTGGACCA 60.022 41.667 0.00 0.00 46.93 4.02
1532 1568 3.177997 AGCAAAACACATTTGGACCAC 57.822 42.857 0.00 0.00 46.93 4.16
1533 1569 1.857837 GCAAAACACATTTGGACCACG 59.142 47.619 0.00 0.00 46.93 4.94
1534 1570 2.737039 GCAAAACACATTTGGACCACGT 60.737 45.455 0.00 0.00 46.93 4.49
1535 1571 2.857152 CAAAACACATTTGGACCACGTG 59.143 45.455 9.08 9.08 43.85 4.49
1536 1572 2.045561 AACACATTTGGACCACGTGA 57.954 45.000 19.30 0.00 0.00 4.35
1537 1573 2.270352 ACACATTTGGACCACGTGAT 57.730 45.000 19.30 0.00 0.00 3.06
1538 1574 2.151202 ACACATTTGGACCACGTGATC 58.849 47.619 19.30 9.98 0.00 2.92
1539 1575 1.468520 CACATTTGGACCACGTGATCC 59.531 52.381 23.07 23.07 35.37 3.36
1540 1576 0.726827 CATTTGGACCACGTGATCCG 59.273 55.000 24.05 5.80 44.03 4.18
1541 1577 0.392461 ATTTGGACCACGTGATCCGG 60.392 55.000 24.05 5.84 42.24 5.14
1542 1578 1.473497 TTTGGACCACGTGATCCGGA 61.473 55.000 24.05 12.47 42.24 5.14
1543 1579 2.162338 TTGGACCACGTGATCCGGAC 62.162 60.000 24.05 3.61 42.24 4.79
1544 1580 2.202570 GACCACGTGATCCGGACG 60.203 66.667 19.30 9.94 42.24 4.79
1545 1581 3.695022 GACCACGTGATCCGGACGG 62.695 68.421 19.30 3.96 41.21 4.79
1555 1591 3.813080 TCCGGACGGATATGAGTGA 57.187 52.632 9.76 0.00 39.76 3.41
1556 1592 2.287977 TCCGGACGGATATGAGTGAT 57.712 50.000 9.76 0.00 39.76 3.06
1557 1593 2.594131 TCCGGACGGATATGAGTGATT 58.406 47.619 9.76 0.00 39.76 2.57
1558 1594 2.963101 TCCGGACGGATATGAGTGATTT 59.037 45.455 9.76 0.00 39.76 2.17
1559 1595 3.059884 CCGGACGGATATGAGTGATTTG 58.940 50.000 4.40 0.00 37.50 2.32
1560 1596 3.243737 CCGGACGGATATGAGTGATTTGA 60.244 47.826 4.40 0.00 37.50 2.69
1561 1597 3.983988 CGGACGGATATGAGTGATTTGAG 59.016 47.826 0.00 0.00 0.00 3.02
1562 1598 4.310769 GGACGGATATGAGTGATTTGAGG 58.689 47.826 0.00 0.00 0.00 3.86
1563 1599 4.310769 GACGGATATGAGTGATTTGAGGG 58.689 47.826 0.00 0.00 0.00 4.30
1564 1600 3.711704 ACGGATATGAGTGATTTGAGGGT 59.288 43.478 0.00 0.00 0.00 4.34
1565 1601 4.202264 ACGGATATGAGTGATTTGAGGGTC 60.202 45.833 0.00 0.00 0.00 4.46
1566 1602 4.310769 GGATATGAGTGATTTGAGGGTCG 58.689 47.826 0.00 0.00 0.00 4.79
1567 1603 2.698855 ATGAGTGATTTGAGGGTCGG 57.301 50.000 0.00 0.00 0.00 4.79
1568 1604 0.036388 TGAGTGATTTGAGGGTCGGC 60.036 55.000 0.00 0.00 0.00 5.54
1569 1605 0.744771 GAGTGATTTGAGGGTCGGCC 60.745 60.000 0.00 0.00 0.00 6.13
1570 1606 1.201429 AGTGATTTGAGGGTCGGCCT 61.201 55.000 5.77 0.00 34.45 5.19
1571 1607 0.322546 GTGATTTGAGGGTCGGCCTT 60.323 55.000 5.77 0.00 34.45 4.35
1572 1608 0.322456 TGATTTGAGGGTCGGCCTTG 60.322 55.000 5.77 0.00 34.45 3.61
1573 1609 1.000896 ATTTGAGGGTCGGCCTTGG 60.001 57.895 5.77 0.00 34.45 3.61
1574 1610 1.497309 ATTTGAGGGTCGGCCTTGGA 61.497 55.000 5.77 0.00 34.45 3.53
1575 1611 2.124507 TTTGAGGGTCGGCCTTGGAG 62.125 60.000 5.77 0.00 34.45 3.86
1576 1612 2.683933 GAGGGTCGGCCTTGGAGA 60.684 66.667 5.77 0.00 34.45 3.71
1577 1613 2.041265 AGGGTCGGCCTTGGAGAT 59.959 61.111 5.77 0.00 34.45 2.75
1578 1614 2.190578 GGGTCGGCCTTGGAGATG 59.809 66.667 5.77 0.00 34.45 2.90
1579 1615 2.367202 GGGTCGGCCTTGGAGATGA 61.367 63.158 5.77 0.00 34.45 2.92
1580 1616 1.153349 GGTCGGCCTTGGAGATGAC 60.153 63.158 0.00 0.00 0.00 3.06
1581 1617 1.596934 GTCGGCCTTGGAGATGACA 59.403 57.895 0.00 0.00 0.00 3.58
1582 1618 0.036388 GTCGGCCTTGGAGATGACAA 60.036 55.000 0.00 0.00 0.00 3.18
1583 1619 0.690192 TCGGCCTTGGAGATGACAAA 59.310 50.000 0.00 0.00 0.00 2.83
1584 1620 1.073125 TCGGCCTTGGAGATGACAAAA 59.927 47.619 0.00 0.00 0.00 2.44
1585 1621 1.200020 CGGCCTTGGAGATGACAAAAC 59.800 52.381 0.00 0.00 0.00 2.43
1586 1622 1.546029 GGCCTTGGAGATGACAAAACC 59.454 52.381 0.00 0.00 0.00 3.27
1587 1623 2.238521 GCCTTGGAGATGACAAAACCA 58.761 47.619 0.00 0.00 0.00 3.67
1588 1624 2.627699 GCCTTGGAGATGACAAAACCAA 59.372 45.455 0.00 0.00 38.12 3.67
1589 1625 3.069443 GCCTTGGAGATGACAAAACCAAA 59.931 43.478 0.00 0.00 39.57 3.28
1590 1626 4.442753 GCCTTGGAGATGACAAAACCAAAA 60.443 41.667 0.00 0.00 39.57 2.44
1591 1627 5.669477 CCTTGGAGATGACAAAACCAAAAA 58.331 37.500 0.00 0.00 39.57 1.94
1632 1668 4.611119 GAGCCTCCCTCTACCCTC 57.389 66.667 0.00 0.00 37.60 4.30
1633 1669 1.529713 GAGCCTCCCTCTACCCTCG 60.530 68.421 0.00 0.00 37.60 4.63
1634 1670 2.522193 GCCTCCCTCTACCCTCGG 60.522 72.222 0.00 0.00 0.00 4.63
1635 1671 3.017139 CCTCCCTCTACCCTCGGT 58.983 66.667 0.00 0.00 40.16 4.69
1636 1672 1.152715 CCTCCCTCTACCCTCGGTC 60.153 68.421 0.00 0.00 37.09 4.79
1637 1673 1.647334 CCTCCCTCTACCCTCGGTCT 61.647 65.000 0.00 0.00 37.09 3.85
1638 1674 1.138568 CTCCCTCTACCCTCGGTCTA 58.861 60.000 0.00 0.00 37.09 2.59
1639 1675 1.706305 CTCCCTCTACCCTCGGTCTAT 59.294 57.143 0.00 0.00 37.09 1.98
1640 1676 2.108601 CTCCCTCTACCCTCGGTCTATT 59.891 54.545 0.00 0.00 37.09 1.73
1641 1677 2.517127 TCCCTCTACCCTCGGTCTATTT 59.483 50.000 0.00 0.00 37.09 1.40
1642 1678 2.628657 CCCTCTACCCTCGGTCTATTTG 59.371 54.545 0.00 0.00 37.09 2.32
1643 1679 2.628657 CCTCTACCCTCGGTCTATTTGG 59.371 54.545 0.00 0.00 37.09 3.28
1644 1680 3.563223 CTCTACCCTCGGTCTATTTGGA 58.437 50.000 0.00 0.00 37.09 3.53
1645 1681 3.563223 TCTACCCTCGGTCTATTTGGAG 58.437 50.000 0.00 0.00 37.09 3.86
1646 1682 2.544844 ACCCTCGGTCTATTTGGAGA 57.455 50.000 0.00 0.00 0.00 3.71
1647 1683 3.047695 ACCCTCGGTCTATTTGGAGAT 57.952 47.619 0.00 0.00 0.00 2.75
1648 1684 3.385115 ACCCTCGGTCTATTTGGAGATT 58.615 45.455 0.00 0.00 0.00 2.40
1649 1685 3.388350 ACCCTCGGTCTATTTGGAGATTC 59.612 47.826 0.00 0.00 0.00 2.52
1650 1686 3.244249 CCCTCGGTCTATTTGGAGATTCC 60.244 52.174 0.00 0.00 36.96 3.01
1651 1687 3.553096 CCTCGGTCTATTTGGAGATTCCG 60.553 52.174 0.00 0.00 40.17 4.30
1652 1688 2.364324 TCGGTCTATTTGGAGATTCCGG 59.636 50.000 0.00 0.00 40.17 5.14
1653 1689 2.548067 CGGTCTATTTGGAGATTCCGGG 60.548 54.545 0.00 0.00 40.17 5.73
1654 1690 2.438392 GGTCTATTTGGAGATTCCGGGT 59.562 50.000 0.00 0.00 40.17 5.28
1655 1691 3.467803 GTCTATTTGGAGATTCCGGGTG 58.532 50.000 0.00 0.00 40.17 4.61
1656 1692 3.134081 GTCTATTTGGAGATTCCGGGTGA 59.866 47.826 0.00 0.00 40.17 4.02
1657 1693 3.778075 TCTATTTGGAGATTCCGGGTGAA 59.222 43.478 0.00 0.00 40.17 3.18
1658 1694 2.961531 TTTGGAGATTCCGGGTGAAA 57.038 45.000 0.00 0.00 40.17 2.69
1659 1695 3.449746 TTTGGAGATTCCGGGTGAAAT 57.550 42.857 0.00 0.00 40.17 2.17
1660 1696 2.418368 TGGAGATTCCGGGTGAAATG 57.582 50.000 0.00 0.00 40.17 2.32
1661 1697 1.064758 TGGAGATTCCGGGTGAAATGG 60.065 52.381 0.00 0.00 40.17 3.16
1662 1698 1.025041 GAGATTCCGGGTGAAATGGC 58.975 55.000 0.00 0.00 36.33 4.40
1663 1699 0.748005 AGATTCCGGGTGAAATGGCG 60.748 55.000 0.00 0.00 36.33 5.69
1664 1700 2.336400 GATTCCGGGTGAAATGGCGC 62.336 60.000 0.00 0.00 36.33 6.53
1665 1701 2.837031 ATTCCGGGTGAAATGGCGCT 62.837 55.000 7.64 0.00 36.33 5.92
1666 1702 3.508840 CCGGGTGAAATGGCGCTC 61.509 66.667 7.64 0.00 0.00 5.03
1667 1703 2.745884 CGGGTGAAATGGCGCTCA 60.746 61.111 7.64 3.81 0.00 4.26
1668 1704 2.331893 CGGGTGAAATGGCGCTCAA 61.332 57.895 7.64 0.00 0.00 3.02
1669 1705 1.656818 CGGGTGAAATGGCGCTCAAT 61.657 55.000 7.64 0.00 0.00 2.57
1670 1706 0.532115 GGGTGAAATGGCGCTCAATT 59.468 50.000 7.64 2.82 0.00 2.32
1671 1707 1.632422 GGTGAAATGGCGCTCAATTG 58.368 50.000 7.64 0.00 0.00 2.32
1672 1708 1.202114 GGTGAAATGGCGCTCAATTGA 59.798 47.619 7.64 8.12 0.00 2.57
1673 1709 2.159198 GGTGAAATGGCGCTCAATTGAT 60.159 45.455 8.96 0.00 0.00 2.57
1674 1710 3.514645 GTGAAATGGCGCTCAATTGATT 58.485 40.909 8.96 0.00 0.00 2.57
1675 1711 3.549070 GTGAAATGGCGCTCAATTGATTC 59.451 43.478 8.96 8.49 0.00 2.52
1676 1712 2.877043 AATGGCGCTCAATTGATTCC 57.123 45.000 8.96 10.64 0.00 3.01
1677 1713 1.766494 ATGGCGCTCAATTGATTCCA 58.234 45.000 19.30 19.30 0.00 3.53
1678 1714 0.810648 TGGCGCTCAATTGATTCCAC 59.189 50.000 8.96 0.00 0.00 4.02
1679 1715 0.810648 GGCGCTCAATTGATTCCACA 59.189 50.000 8.96 0.00 0.00 4.17
1680 1716 1.202222 GGCGCTCAATTGATTCCACAG 60.202 52.381 8.96 0.00 0.00 3.66
1681 1717 1.739466 GCGCTCAATTGATTCCACAGA 59.261 47.619 8.96 0.00 0.00 3.41
1682 1718 2.223203 GCGCTCAATTGATTCCACAGAG 60.223 50.000 8.96 0.00 0.00 3.35
1683 1719 2.353889 CGCTCAATTGATTCCACAGAGG 59.646 50.000 8.96 0.00 39.47 3.69
1684 1720 2.686915 GCTCAATTGATTCCACAGAGGG 59.313 50.000 8.96 0.00 38.24 4.30
1685 1721 2.686915 CTCAATTGATTCCACAGAGGGC 59.313 50.000 8.96 0.00 38.24 5.19
1686 1722 1.402968 CAATTGATTCCACAGAGGGCG 59.597 52.381 0.00 0.00 38.24 6.13
1687 1723 0.749454 ATTGATTCCACAGAGGGCGC 60.749 55.000 0.00 0.00 38.24 6.53
1688 1724 1.841302 TTGATTCCACAGAGGGCGCT 61.841 55.000 7.64 1.38 38.24 5.92
1689 1725 1.522580 GATTCCACAGAGGGCGCTC 60.523 63.158 22.44 22.44 38.24 5.03
1690 1726 1.965754 GATTCCACAGAGGGCGCTCT 61.966 60.000 26.38 26.38 38.24 4.09
1691 1727 1.965754 ATTCCACAGAGGGCGCTCTC 61.966 60.000 30.24 30.24 38.24 3.20
1692 1728 4.504916 CCACAGAGGGCGCTCTCG 62.505 72.222 30.60 25.75 38.71 4.04
1693 1729 3.753434 CACAGAGGGCGCTCTCGT 61.753 66.667 30.60 26.38 38.71 4.18
1694 1730 3.753434 ACAGAGGGCGCTCTCGTG 61.753 66.667 30.60 27.64 38.71 4.35
1701 1737 2.127609 GCGCTCTCGTGCAACAAC 60.128 61.111 0.00 0.00 45.76 3.32
1702 1738 2.551270 CGCTCTCGTGCAACAACC 59.449 61.111 0.00 0.00 35.74 3.77
1703 1739 2.243957 CGCTCTCGTGCAACAACCA 61.244 57.895 0.00 0.00 35.74 3.67
1704 1740 1.771073 CGCTCTCGTGCAACAACCAA 61.771 55.000 0.00 0.00 35.74 3.67
1705 1741 0.593128 GCTCTCGTGCAACAACCAAT 59.407 50.000 0.00 0.00 35.74 3.16
1706 1742 1.664016 GCTCTCGTGCAACAACCAATG 60.664 52.381 0.00 0.00 35.74 2.82
1707 1743 1.872952 CTCTCGTGCAACAACCAATGA 59.127 47.619 0.00 0.00 35.74 2.57
1708 1744 1.872952 TCTCGTGCAACAACCAATGAG 59.127 47.619 0.00 0.00 35.74 2.90
1921 1965 2.361610 CCTCGCCAAACCATGCCT 60.362 61.111 0.00 0.00 0.00 4.75
2080 2127 1.202639 TCTTCTTCTTCTGCACGCCAA 60.203 47.619 0.00 0.00 0.00 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 9.387123 GTTCATAAGTTTTGCTTCTTCTTACTG 57.613 33.333 0.00 0.00 38.57 2.74
52 53 1.078778 ATTGCGTGCGACCACCATA 60.079 52.632 0.00 0.00 38.79 2.74
64 73 0.323360 AGGTAATGTGGCCATTGCGT 60.323 50.000 9.72 2.13 42.57 5.24
80 89 2.833957 GGTTGACCGGTTGGAGGT 59.166 61.111 9.42 0.00 46.16 3.85
117 127 1.202675 GGTACACCGTCCAGAAAACCA 60.203 52.381 0.00 0.00 0.00 3.67
162 173 5.045012 ACATGCACATATCCATGAACTCT 57.955 39.130 12.18 0.00 40.92 3.24
217 230 0.267356 AGAAGAGAGATGGGAGGGGG 59.733 60.000 0.00 0.00 0.00 5.40
218 231 1.422531 CAGAAGAGAGATGGGAGGGG 58.577 60.000 0.00 0.00 0.00 4.79
221 234 1.688197 GGAGCAGAAGAGAGATGGGAG 59.312 57.143 0.00 0.00 0.00 4.30
223 236 1.413445 CAGGAGCAGAAGAGAGATGGG 59.587 57.143 0.00 0.00 0.00 4.00
225 238 1.202557 GGCAGGAGCAGAAGAGAGATG 60.203 57.143 0.00 0.00 44.61 2.90
229 260 1.897225 GCAGGCAGGAGCAGAAGAGA 61.897 60.000 0.00 0.00 44.61 3.10
231 262 2.667418 GCAGGCAGGAGCAGAAGA 59.333 61.111 0.00 0.00 44.61 2.87
258 290 0.108709 GACGTGTGGTTGGCCGTATA 60.109 55.000 0.00 0.00 37.67 1.47
275 307 3.932710 TGAAGGATGAGTTGTTATGCGAC 59.067 43.478 0.00 0.00 0.00 5.19
360 393 4.454161 CAGGTGTTCGGTCAAATGTCATTA 59.546 41.667 0.00 0.00 0.00 1.90
405 439 3.217231 CCCCCTATCGACGCTGTT 58.783 61.111 0.00 0.00 0.00 3.16
425 459 1.302033 CCGCAGCCAGGTATCATCC 60.302 63.158 0.00 0.00 0.00 3.51
428 462 2.900273 GTCCGCAGCCAGGTATCA 59.100 61.111 0.00 0.00 0.00 2.15
433 467 4.899239 GATCCGTCCGCAGCCAGG 62.899 72.222 0.00 0.00 0.00 4.45
434 468 4.899239 GGATCCGTCCGCAGCCAG 62.899 72.222 0.00 0.00 34.13 4.85
442 476 3.721868 TCCAACCAGGATCCGTCC 58.278 61.111 5.98 0.00 43.07 4.79
450 484 0.540365 AACAGCACCATCCAACCAGG 60.540 55.000 0.00 0.00 39.47 4.45
451 485 0.599558 CAACAGCACCATCCAACCAG 59.400 55.000 0.00 0.00 0.00 4.00
452 486 0.106268 ACAACAGCACCATCCAACCA 60.106 50.000 0.00 0.00 0.00 3.67
453 487 1.539827 GTACAACAGCACCATCCAACC 59.460 52.381 0.00 0.00 0.00 3.77
454 488 2.226330 TGTACAACAGCACCATCCAAC 58.774 47.619 0.00 0.00 0.00 3.77
455 489 2.647683 TGTACAACAGCACCATCCAA 57.352 45.000 0.00 0.00 0.00 3.53
456 490 2.105649 TCTTGTACAACAGCACCATCCA 59.894 45.455 3.59 0.00 0.00 3.41
457 491 2.484264 GTCTTGTACAACAGCACCATCC 59.516 50.000 3.59 0.00 0.00 3.51
458 492 2.157668 CGTCTTGTACAACAGCACCATC 59.842 50.000 3.59 0.00 0.00 3.51
459 493 2.143122 CGTCTTGTACAACAGCACCAT 58.857 47.619 3.59 0.00 0.00 3.55
460 494 1.137282 TCGTCTTGTACAACAGCACCA 59.863 47.619 3.59 0.00 0.00 4.17
461 495 1.792949 CTCGTCTTGTACAACAGCACC 59.207 52.381 3.59 0.00 0.00 5.01
462 496 2.218759 CACTCGTCTTGTACAACAGCAC 59.781 50.000 3.59 0.00 0.00 4.40
463 497 2.469826 CACTCGTCTTGTACAACAGCA 58.530 47.619 3.59 0.00 0.00 4.41
464 498 1.792949 CCACTCGTCTTGTACAACAGC 59.207 52.381 3.59 0.00 0.00 4.40
465 499 2.223971 ACCCACTCGTCTTGTACAACAG 60.224 50.000 3.59 0.00 0.00 3.16
466 500 1.758280 ACCCACTCGTCTTGTACAACA 59.242 47.619 3.59 0.00 0.00 3.33
467 501 2.132762 CACCCACTCGTCTTGTACAAC 58.867 52.381 3.59 0.00 0.00 3.32
468 502 1.758280 ACACCCACTCGTCTTGTACAA 59.242 47.619 8.28 8.28 0.00 2.41
469 503 1.067974 CACACCCACTCGTCTTGTACA 59.932 52.381 0.00 0.00 0.00 2.90
470 504 1.068127 ACACACCCACTCGTCTTGTAC 59.932 52.381 0.00 0.00 0.00 2.90
471 505 1.067974 CACACACCCACTCGTCTTGTA 59.932 52.381 0.00 0.00 0.00 2.41
472 506 0.179084 CACACACCCACTCGTCTTGT 60.179 55.000 0.00 0.00 0.00 3.16
473 507 0.880278 CCACACACCCACTCGTCTTG 60.880 60.000 0.00 0.00 0.00 3.02
474 508 1.445942 CCACACACCCACTCGTCTT 59.554 57.895 0.00 0.00 0.00 3.01
475 509 2.507854 CCCACACACCCACTCGTCT 61.508 63.158 0.00 0.00 0.00 4.18
476 510 2.030562 CCCACACACCCACTCGTC 59.969 66.667 0.00 0.00 0.00 4.20
477 511 2.766651 ACCCACACACCCACTCGT 60.767 61.111 0.00 0.00 0.00 4.18
478 512 2.280797 CACCCACACACCCACTCG 60.281 66.667 0.00 0.00 0.00 4.18
479 513 1.525995 CACACCCACACACCCACTC 60.526 63.158 0.00 0.00 0.00 3.51
480 514 2.595095 CACACCCACACACCCACT 59.405 61.111 0.00 0.00 0.00 4.00
481 515 2.518349 CCACACCCACACACCCAC 60.518 66.667 0.00 0.00 0.00 4.61
482 516 3.814906 CCCACACCCACACACCCA 61.815 66.667 0.00 0.00 0.00 4.51
483 517 3.367907 AACCCACACCCACACACCC 62.368 63.158 0.00 0.00 0.00 4.61
484 518 2.124693 CAACCCACACCCACACACC 61.125 63.158 0.00 0.00 0.00 4.16
485 519 2.781158 GCAACCCACACCCACACAC 61.781 63.158 0.00 0.00 0.00 3.82
486 520 2.441164 GCAACCCACACCCACACA 60.441 61.111 0.00 0.00 0.00 3.72
487 521 3.591835 CGCAACCCACACCCACAC 61.592 66.667 0.00 0.00 0.00 3.82
488 522 4.885270 CCGCAACCCACACCCACA 62.885 66.667 0.00 0.00 0.00 4.17
489 523 4.572571 TCCGCAACCCACACCCAC 62.573 66.667 0.00 0.00 0.00 4.61
490 524 4.572571 GTCCGCAACCCACACCCA 62.573 66.667 0.00 0.00 0.00 4.51
498 532 3.905437 TTAAGGGGCGTCCGCAACC 62.905 63.158 14.19 14.28 44.11 3.77
499 533 1.747745 ATTAAGGGGCGTCCGCAAC 60.748 57.895 14.19 5.58 44.11 4.17
500 534 1.747367 CATTAAGGGGCGTCCGCAA 60.747 57.895 14.19 0.00 44.11 4.85
501 535 2.124901 CATTAAGGGGCGTCCGCA 60.125 61.111 14.19 0.00 44.11 5.69
502 536 3.583086 GCATTAAGGGGCGTCCGC 61.583 66.667 0.00 2.45 41.52 5.54
503 537 2.900337 GGCATTAAGGGGCGTCCG 60.900 66.667 0.00 0.00 41.52 4.79
504 538 1.823899 CAGGCATTAAGGGGCGTCC 60.824 63.158 0.00 0.00 35.71 4.79
505 539 1.823899 CCAGGCATTAAGGGGCGTC 60.824 63.158 0.00 0.00 35.71 5.19
506 540 2.275418 CCAGGCATTAAGGGGCGT 59.725 61.111 0.00 0.00 35.71 5.68
507 541 2.519302 CCCAGGCATTAAGGGGCG 60.519 66.667 0.00 0.00 38.98 6.13
509 543 2.357593 ATCGCCCAGGCATTAAGGGG 62.358 60.000 9.78 0.00 43.04 4.79
510 544 0.400213 TATCGCCCAGGCATTAAGGG 59.600 55.000 9.78 0.00 45.68 3.95
511 545 1.611673 CCTATCGCCCAGGCATTAAGG 60.612 57.143 9.78 5.79 42.06 2.69
512 546 1.347707 TCCTATCGCCCAGGCATTAAG 59.652 52.381 9.78 0.25 42.06 1.85
513 547 1.347707 CTCCTATCGCCCAGGCATTAA 59.652 52.381 9.78 0.00 42.06 1.40
514 548 0.976641 CTCCTATCGCCCAGGCATTA 59.023 55.000 9.78 0.00 42.06 1.90
515 549 1.757306 CTCCTATCGCCCAGGCATT 59.243 57.895 9.78 0.00 42.06 3.56
516 550 2.219875 CCTCCTATCGCCCAGGCAT 61.220 63.158 9.78 4.35 42.06 4.40
517 551 2.844362 CCTCCTATCGCCCAGGCA 60.844 66.667 9.78 0.00 42.06 4.75
518 552 3.631046 CCCTCCTATCGCCCAGGC 61.631 72.222 0.00 0.00 32.82 4.85
519 553 2.122813 ACCCTCCTATCGCCCAGG 60.123 66.667 0.00 0.00 34.20 4.45
520 554 1.762460 ACACCCTCCTATCGCCCAG 60.762 63.158 0.00 0.00 0.00 4.45
521 555 2.063979 CACACCCTCCTATCGCCCA 61.064 63.158 0.00 0.00 0.00 5.36
522 556 2.808206 CCACACCCTCCTATCGCCC 61.808 68.421 0.00 0.00 0.00 6.13
523 557 1.122019 ATCCACACCCTCCTATCGCC 61.122 60.000 0.00 0.00 0.00 5.54
524 558 0.034059 CATCCACACCCTCCTATCGC 59.966 60.000 0.00 0.00 0.00 4.58
525 559 0.034059 GCATCCACACCCTCCTATCG 59.966 60.000 0.00 0.00 0.00 2.92
526 560 1.131638 TGCATCCACACCCTCCTATC 58.868 55.000 0.00 0.00 0.00 2.08
527 561 1.595311 TTGCATCCACACCCTCCTAT 58.405 50.000 0.00 0.00 0.00 2.57
528 562 1.281867 CTTTGCATCCACACCCTCCTA 59.718 52.381 0.00 0.00 0.00 2.94
529 563 0.038744 CTTTGCATCCACACCCTCCT 59.961 55.000 0.00 0.00 0.00 3.69
530 564 0.251341 ACTTTGCATCCACACCCTCC 60.251 55.000 0.00 0.00 0.00 4.30
531 565 2.489938 TACTTTGCATCCACACCCTC 57.510 50.000 0.00 0.00 0.00 4.30
532 566 2.555227 CCTTACTTTGCATCCACACCCT 60.555 50.000 0.00 0.00 0.00 4.34
533 567 1.818674 CCTTACTTTGCATCCACACCC 59.181 52.381 0.00 0.00 0.00 4.61
534 568 1.818674 CCCTTACTTTGCATCCACACC 59.181 52.381 0.00 0.00 0.00 4.16
535 569 1.818674 CCCCTTACTTTGCATCCACAC 59.181 52.381 0.00 0.00 0.00 3.82
536 570 1.272425 CCCCCTTACTTTGCATCCACA 60.272 52.381 0.00 0.00 0.00 4.17
537 571 1.474330 CCCCCTTACTTTGCATCCAC 58.526 55.000 0.00 0.00 0.00 4.02
538 572 0.324275 GCCCCCTTACTTTGCATCCA 60.324 55.000 0.00 0.00 0.00 3.41
539 573 0.324275 TGCCCCCTTACTTTGCATCC 60.324 55.000 0.00 0.00 0.00 3.51
540 574 1.106285 CTGCCCCCTTACTTTGCATC 58.894 55.000 0.00 0.00 0.00 3.91
541 575 0.324645 CCTGCCCCCTTACTTTGCAT 60.325 55.000 0.00 0.00 0.00 3.96
542 576 1.076549 CCTGCCCCCTTACTTTGCA 59.923 57.895 0.00 0.00 0.00 4.08
543 577 1.682344 CCCTGCCCCCTTACTTTGC 60.682 63.158 0.00 0.00 0.00 3.68
544 578 0.323451 GTCCCTGCCCCCTTACTTTG 60.323 60.000 0.00 0.00 0.00 2.77
545 579 0.774491 TGTCCCTGCCCCCTTACTTT 60.774 55.000 0.00 0.00 0.00 2.66
546 580 1.151677 TGTCCCTGCCCCCTTACTT 60.152 57.895 0.00 0.00 0.00 2.24
547 581 1.616628 CTGTCCCTGCCCCCTTACT 60.617 63.158 0.00 0.00 0.00 2.24
548 582 1.615424 TCTGTCCCTGCCCCCTTAC 60.615 63.158 0.00 0.00 0.00 2.34
549 583 1.306997 CTCTGTCCCTGCCCCCTTA 60.307 63.158 0.00 0.00 0.00 2.69
550 584 2.612115 CTCTGTCCCTGCCCCCTT 60.612 66.667 0.00 0.00 0.00 3.95
551 585 3.947041 ACTCTGTCCCTGCCCCCT 61.947 66.667 0.00 0.00 0.00 4.79
552 586 3.721706 CACTCTGTCCCTGCCCCC 61.722 72.222 0.00 0.00 0.00 5.40
553 587 3.721706 CCACTCTGTCCCTGCCCC 61.722 72.222 0.00 0.00 0.00 5.80
554 588 2.190488 CTTCCACTCTGTCCCTGCCC 62.190 65.000 0.00 0.00 0.00 5.36
555 589 1.194781 TCTTCCACTCTGTCCCTGCC 61.195 60.000 0.00 0.00 0.00 4.85
556 590 0.248843 CTCTTCCACTCTGTCCCTGC 59.751 60.000 0.00 0.00 0.00 4.85
557 591 1.930251 TCTCTTCCACTCTGTCCCTG 58.070 55.000 0.00 0.00 0.00 4.45
558 592 2.704190 TTCTCTTCCACTCTGTCCCT 57.296 50.000 0.00 0.00 0.00 4.20
559 593 2.093235 CCATTCTCTTCCACTCTGTCCC 60.093 54.545 0.00 0.00 0.00 4.46
560 594 2.093235 CCCATTCTCTTCCACTCTGTCC 60.093 54.545 0.00 0.00 0.00 4.02
561 595 2.834549 TCCCATTCTCTTCCACTCTGTC 59.165 50.000 0.00 0.00 0.00 3.51
562 596 2.569404 GTCCCATTCTCTTCCACTCTGT 59.431 50.000 0.00 0.00 0.00 3.41
563 597 2.836981 AGTCCCATTCTCTTCCACTCTG 59.163 50.000 0.00 0.00 0.00 3.35
564 598 2.836981 CAGTCCCATTCTCTTCCACTCT 59.163 50.000 0.00 0.00 0.00 3.24
565 599 2.093235 CCAGTCCCATTCTCTTCCACTC 60.093 54.545 0.00 0.00 0.00 3.51
566 600 1.912043 CCAGTCCCATTCTCTTCCACT 59.088 52.381 0.00 0.00 0.00 4.00
567 601 1.909302 TCCAGTCCCATTCTCTTCCAC 59.091 52.381 0.00 0.00 0.00 4.02
568 602 2.342406 TCCAGTCCCATTCTCTTCCA 57.658 50.000 0.00 0.00 0.00 3.53
569 603 2.840651 TCTTCCAGTCCCATTCTCTTCC 59.159 50.000 0.00 0.00 0.00 3.46
570 604 4.559862 TTCTTCCAGTCCCATTCTCTTC 57.440 45.455 0.00 0.00 0.00 2.87
571 605 6.642733 TTATTCTTCCAGTCCCATTCTCTT 57.357 37.500 0.00 0.00 0.00 2.85
572 606 6.838401 ATTATTCTTCCAGTCCCATTCTCT 57.162 37.500 0.00 0.00 0.00 3.10
573 607 7.557719 TCAAATTATTCTTCCAGTCCCATTCTC 59.442 37.037 0.00 0.00 0.00 2.87
574 608 7.413446 TCAAATTATTCTTCCAGTCCCATTCT 58.587 34.615 0.00 0.00 0.00 2.40
575 609 7.340487 ACTCAAATTATTCTTCCAGTCCCATTC 59.660 37.037 0.00 0.00 0.00 2.67
576 610 7.184862 ACTCAAATTATTCTTCCAGTCCCATT 58.815 34.615 0.00 0.00 0.00 3.16
577 611 6.735556 ACTCAAATTATTCTTCCAGTCCCAT 58.264 36.000 0.00 0.00 0.00 4.00
578 612 6.139679 ACTCAAATTATTCTTCCAGTCCCA 57.860 37.500 0.00 0.00 0.00 4.37
579 613 6.768381 CCTACTCAAATTATTCTTCCAGTCCC 59.232 42.308 0.00 0.00 0.00 4.46
580 614 6.261158 GCCTACTCAAATTATTCTTCCAGTCC 59.739 42.308 0.00 0.00 0.00 3.85
581 615 6.261158 GGCCTACTCAAATTATTCTTCCAGTC 59.739 42.308 0.00 0.00 0.00 3.51
582 616 6.122964 GGCCTACTCAAATTATTCTTCCAGT 58.877 40.000 0.00 0.00 0.00 4.00
583 617 5.532779 GGGCCTACTCAAATTATTCTTCCAG 59.467 44.000 0.84 0.00 0.00 3.86
584 618 5.445964 GGGCCTACTCAAATTATTCTTCCA 58.554 41.667 0.84 0.00 0.00 3.53
585 619 4.515567 CGGGCCTACTCAAATTATTCTTCC 59.484 45.833 0.84 0.00 0.00 3.46
586 620 4.515567 CCGGGCCTACTCAAATTATTCTTC 59.484 45.833 0.84 0.00 0.00 2.87
587 621 4.461198 CCGGGCCTACTCAAATTATTCTT 58.539 43.478 0.84 0.00 0.00 2.52
588 622 3.181443 CCCGGGCCTACTCAAATTATTCT 60.181 47.826 8.08 0.00 0.00 2.40
589 623 3.146847 CCCGGGCCTACTCAAATTATTC 58.853 50.000 8.08 0.00 0.00 1.75
590 624 2.158519 CCCCGGGCCTACTCAAATTATT 60.159 50.000 17.73 0.00 0.00 1.40
591 625 1.423921 CCCCGGGCCTACTCAAATTAT 59.576 52.381 17.73 0.00 0.00 1.28
592 626 0.841289 CCCCGGGCCTACTCAAATTA 59.159 55.000 17.73 0.00 0.00 1.40
593 627 1.212250 ACCCCGGGCCTACTCAAATT 61.212 55.000 17.73 0.00 0.00 1.82
594 628 1.618447 ACCCCGGGCCTACTCAAAT 60.618 57.895 17.73 0.00 0.00 2.32
595 629 2.204029 ACCCCGGGCCTACTCAAA 60.204 61.111 17.73 0.00 0.00 2.69
596 630 3.006728 CACCCCGGGCCTACTCAA 61.007 66.667 17.73 0.00 0.00 3.02
597 631 4.326227 ACACCCCGGGCCTACTCA 62.326 66.667 17.73 0.00 0.00 3.41
598 632 3.468140 GACACCCCGGGCCTACTC 61.468 72.222 17.73 0.01 0.00 2.59
607 641 2.044650 TAGGACTCCGACACCCCG 60.045 66.667 0.00 0.00 0.00 5.73
608 642 2.413142 CGTAGGACTCCGACACCCC 61.413 68.421 8.84 0.00 0.00 4.95
609 643 1.246737 AACGTAGGACTCCGACACCC 61.247 60.000 8.84 0.00 0.00 4.61
610 644 0.600057 AAACGTAGGACTCCGACACC 59.400 55.000 8.84 0.00 0.00 4.16
611 645 2.428888 AAAACGTAGGACTCCGACAC 57.571 50.000 8.84 0.00 0.00 3.67
732 766 1.211457 AGATGGTGGCTTCAGGCTTAG 59.789 52.381 1.64 0.00 41.69 2.18
806 840 4.876107 CGATGTCTGTTTGGTATTAGGCTT 59.124 41.667 0.00 0.00 0.00 4.35
878 912 3.936203 GCGTGTGACCCAGTCCCA 61.936 66.667 0.00 0.00 0.00 4.37
923 957 2.240162 GATCGGTGGAAGAAGGCGGT 62.240 60.000 0.00 0.00 0.00 5.68
1197 1232 2.058675 CCGTCTTGGGAGGAACTGT 58.941 57.895 0.00 0.00 41.55 3.55
1403 1439 2.031465 CCCAAACCACCGCTACGT 59.969 61.111 0.00 0.00 0.00 3.57
1404 1440 3.428282 GCCCAAACCACCGCTACG 61.428 66.667 0.00 0.00 0.00 3.51
1405 1441 1.583495 GAAGCCCAAACCACCGCTAC 61.583 60.000 0.00 0.00 0.00 3.58
1406 1442 1.302993 GAAGCCCAAACCACCGCTA 60.303 57.895 0.00 0.00 0.00 4.26
1407 1443 2.597510 GAAGCCCAAACCACCGCT 60.598 61.111 0.00 0.00 0.00 5.52
1408 1444 3.680786 GGAAGCCCAAACCACCGC 61.681 66.667 0.00 0.00 0.00 5.68
1409 1445 3.361977 CGGAAGCCCAAACCACCG 61.362 66.667 0.00 0.00 34.77 4.94
1421 1457 2.561037 GGGGTGTGGTTTGCGGAAG 61.561 63.158 0.00 0.00 0.00 3.46
1422 1458 2.519780 GGGGTGTGGTTTGCGGAA 60.520 61.111 0.00 0.00 0.00 4.30
1423 1459 4.589675 GGGGGTGTGGTTTGCGGA 62.590 66.667 0.00 0.00 0.00 5.54
1426 1462 1.962321 AAAACGGGGGTGTGGTTTGC 61.962 55.000 0.00 0.00 34.38 3.68
1427 1463 0.179097 CAAAACGGGGGTGTGGTTTG 60.179 55.000 0.00 0.00 34.38 2.93
1428 1464 0.615261 ACAAAACGGGGGTGTGGTTT 60.615 50.000 0.00 0.00 35.54 3.27
1429 1465 0.615261 AACAAAACGGGGGTGTGGTT 60.615 50.000 0.00 0.00 0.00 3.67
1430 1466 0.615261 AAACAAAACGGGGGTGTGGT 60.615 50.000 0.00 0.00 0.00 4.16
1431 1467 0.103390 GAAACAAAACGGGGGTGTGG 59.897 55.000 0.00 0.00 0.00 4.17
1432 1468 0.103390 GGAAACAAAACGGGGGTGTG 59.897 55.000 0.00 0.00 0.00 3.82
1433 1469 0.324460 TGGAAACAAAACGGGGGTGT 60.324 50.000 0.00 0.00 37.44 4.16
1434 1470 2.506065 TGGAAACAAAACGGGGGTG 58.494 52.632 0.00 0.00 37.44 4.61
1454 1490 2.159382 GGAAGCCATTTCTGTCGGAAA 58.841 47.619 9.27 9.27 46.33 3.13
1455 1491 1.821216 GGAAGCCATTTCTGTCGGAA 58.179 50.000 0.00 0.00 36.03 4.30
1456 1492 0.391130 CGGAAGCCATTTCTGTCGGA 60.391 55.000 0.00 0.00 37.39 4.55
1457 1493 0.391130 TCGGAAGCCATTTCTGTCGG 60.391 55.000 0.00 0.00 41.94 4.79
1458 1494 1.128692 GTTCGGAAGCCATTTCTGTCG 59.871 52.381 0.00 0.00 41.94 4.35
1459 1495 1.468914 GGTTCGGAAGCCATTTCTGTC 59.531 52.381 8.71 0.00 41.94 3.51
1460 1496 1.534729 GGTTCGGAAGCCATTTCTGT 58.465 50.000 8.71 0.00 41.94 3.41
1461 1497 0.447801 CGGTTCGGAAGCCATTTCTG 59.552 55.000 13.77 0.00 42.51 3.02
1462 1498 1.305930 GCGGTTCGGAAGCCATTTCT 61.306 55.000 13.77 0.00 36.03 2.52
1463 1499 1.136774 GCGGTTCGGAAGCCATTTC 59.863 57.895 13.77 0.00 34.93 2.17
1464 1500 1.303317 AGCGGTTCGGAAGCCATTT 60.303 52.632 13.77 0.00 0.00 2.32
1465 1501 1.745489 GAGCGGTTCGGAAGCCATT 60.745 57.895 13.77 0.37 0.00 3.16
1466 1502 2.125106 GAGCGGTTCGGAAGCCAT 60.125 61.111 13.77 3.07 0.00 4.40
1467 1503 4.388499 GGAGCGGTTCGGAAGCCA 62.388 66.667 13.77 0.00 0.00 4.75
1468 1504 4.388499 TGGAGCGGTTCGGAAGCC 62.388 66.667 13.77 7.22 0.00 4.35
1469 1505 3.119096 GTGGAGCGGTTCGGAAGC 61.119 66.667 9.80 9.80 0.00 3.86
1470 1506 1.738099 CTGTGGAGCGGTTCGGAAG 60.738 63.158 0.00 0.00 0.00 3.46
1471 1507 2.204461 TCTGTGGAGCGGTTCGGAA 61.204 57.895 0.00 0.00 0.00 4.30
1472 1508 2.599281 TCTGTGGAGCGGTTCGGA 60.599 61.111 0.00 0.00 0.00 4.55
1473 1509 2.432628 GTCTGTGGAGCGGTTCGG 60.433 66.667 0.00 0.00 0.00 4.30
1474 1510 2.432628 GGTCTGTGGAGCGGTTCG 60.433 66.667 0.00 0.00 0.00 3.95
1480 1516 0.103208 CCAGTATCGGTCTGTGGAGC 59.897 60.000 0.00 0.00 36.69 4.70
1481 1517 0.747255 CCCAGTATCGGTCTGTGGAG 59.253 60.000 0.00 0.00 0.00 3.86
1482 1518 0.686441 CCCCAGTATCGGTCTGTGGA 60.686 60.000 0.00 0.00 33.41 4.02
1483 1519 1.823295 CCCCAGTATCGGTCTGTGG 59.177 63.158 0.00 0.00 0.00 4.17
1484 1520 1.144057 GCCCCAGTATCGGTCTGTG 59.856 63.158 0.00 0.00 0.00 3.66
1485 1521 2.423898 CGCCCCAGTATCGGTCTGT 61.424 63.158 0.00 0.00 0.00 3.41
1486 1522 2.417516 CGCCCCAGTATCGGTCTG 59.582 66.667 0.00 0.00 0.00 3.51
1487 1523 3.537874 GCGCCCCAGTATCGGTCT 61.538 66.667 0.00 0.00 0.00 3.85
1488 1524 4.944372 CGCGCCCCAGTATCGGTC 62.944 72.222 0.00 0.00 0.00 4.79
1496 1532 4.976925 CTATCCAGCGCGCCCCAG 62.977 72.222 30.33 15.47 0.00 4.45
1506 1542 5.163513 GTCCAAATGTGTTTTGCTATCCAG 58.836 41.667 0.00 0.00 42.85 3.86
1507 1543 4.021544 GGTCCAAATGTGTTTTGCTATCCA 60.022 41.667 0.00 0.00 42.85 3.41
1508 1544 4.021544 TGGTCCAAATGTGTTTTGCTATCC 60.022 41.667 0.00 0.00 42.85 2.59
1509 1545 4.923281 GTGGTCCAAATGTGTTTTGCTATC 59.077 41.667 0.00 0.00 42.85 2.08
1510 1546 4.558496 CGTGGTCCAAATGTGTTTTGCTAT 60.558 41.667 0.00 0.00 42.85 2.97
1511 1547 3.243234 CGTGGTCCAAATGTGTTTTGCTA 60.243 43.478 0.00 0.00 42.85 3.49
1512 1548 2.481104 CGTGGTCCAAATGTGTTTTGCT 60.481 45.455 0.00 0.00 42.85 3.91
1513 1549 1.857837 CGTGGTCCAAATGTGTTTTGC 59.142 47.619 0.00 0.00 42.85 3.68
1514 1550 2.857152 CACGTGGTCCAAATGTGTTTTG 59.143 45.455 7.95 0.00 43.64 2.44
1515 1551 2.755655 TCACGTGGTCCAAATGTGTTTT 59.244 40.909 17.00 0.00 32.55 2.43
1516 1552 2.370349 TCACGTGGTCCAAATGTGTTT 58.630 42.857 17.00 0.00 32.55 2.83
1517 1553 2.045561 TCACGTGGTCCAAATGTGTT 57.954 45.000 17.00 0.00 32.55 3.32
1518 1554 2.151202 GATCACGTGGTCCAAATGTGT 58.849 47.619 18.33 7.21 32.55 3.72
1519 1555 1.468520 GGATCACGTGGTCCAAATGTG 59.531 52.381 37.31 11.98 34.57 3.21
1520 1556 1.821216 GGATCACGTGGTCCAAATGT 58.179 50.000 37.31 4.29 34.57 2.71
1521 1557 0.726827 CGGATCACGTGGTCCAAATG 59.273 55.000 39.32 23.74 37.93 2.32
1522 1558 0.392461 CCGGATCACGTGGTCCAAAT 60.392 55.000 39.32 16.06 42.24 2.32
1523 1559 1.004320 CCGGATCACGTGGTCCAAA 60.004 57.895 39.32 11.69 42.24 3.28
1524 1560 1.909287 TCCGGATCACGTGGTCCAA 60.909 57.895 39.32 27.27 42.24 3.53
1525 1561 2.283316 TCCGGATCACGTGGTCCA 60.283 61.111 39.32 23.68 42.24 4.02
1526 1562 2.183555 GTCCGGATCACGTGGTCC 59.816 66.667 33.82 33.82 42.24 4.46
1527 1563 2.202570 CGTCCGGATCACGTGGTC 60.203 66.667 20.80 20.80 42.24 4.02
1528 1564 3.755628 CCGTCCGGATCACGTGGT 61.756 66.667 17.00 8.94 42.24 4.16
1529 1565 3.445687 TCCGTCCGGATCACGTGG 61.446 66.667 17.00 3.36 39.76 4.94
1538 1574 3.059884 CAAATCACTCATATCCGTCCGG 58.940 50.000 0.00 0.00 0.00 5.14
1539 1575 3.977427 TCAAATCACTCATATCCGTCCG 58.023 45.455 0.00 0.00 0.00 4.79
1540 1576 4.310769 CCTCAAATCACTCATATCCGTCC 58.689 47.826 0.00 0.00 0.00 4.79
1541 1577 4.202264 ACCCTCAAATCACTCATATCCGTC 60.202 45.833 0.00 0.00 0.00 4.79
1542 1578 3.711704 ACCCTCAAATCACTCATATCCGT 59.288 43.478 0.00 0.00 0.00 4.69
1543 1579 4.310769 GACCCTCAAATCACTCATATCCG 58.689 47.826 0.00 0.00 0.00 4.18
1544 1580 4.310769 CGACCCTCAAATCACTCATATCC 58.689 47.826 0.00 0.00 0.00 2.59
1545 1581 4.310769 CCGACCCTCAAATCACTCATATC 58.689 47.826 0.00 0.00 0.00 1.63
1546 1582 3.495100 GCCGACCCTCAAATCACTCATAT 60.495 47.826 0.00 0.00 0.00 1.78
1547 1583 2.158957 GCCGACCCTCAAATCACTCATA 60.159 50.000 0.00 0.00 0.00 2.15
1548 1584 1.407437 GCCGACCCTCAAATCACTCAT 60.407 52.381 0.00 0.00 0.00 2.90
1549 1585 0.036388 GCCGACCCTCAAATCACTCA 60.036 55.000 0.00 0.00 0.00 3.41
1550 1586 0.744771 GGCCGACCCTCAAATCACTC 60.745 60.000 0.00 0.00 0.00 3.51
1551 1587 1.201429 AGGCCGACCCTCAAATCACT 61.201 55.000 0.00 0.00 41.21 3.41
1552 1588 0.322546 AAGGCCGACCCTCAAATCAC 60.323 55.000 0.00 0.00 45.62 3.06
1553 1589 0.322456 CAAGGCCGACCCTCAAATCA 60.322 55.000 0.00 0.00 45.62 2.57
1554 1590 1.032114 CCAAGGCCGACCCTCAAATC 61.032 60.000 0.00 0.00 45.62 2.17
1555 1591 1.000896 CCAAGGCCGACCCTCAAAT 60.001 57.895 0.00 0.00 45.62 2.32
1556 1592 2.124507 CTCCAAGGCCGACCCTCAAA 62.125 60.000 0.00 0.00 45.62 2.69
1557 1593 2.528127 TCCAAGGCCGACCCTCAA 60.528 61.111 0.00 0.00 45.62 3.02
1558 1594 2.822643 ATCTCCAAGGCCGACCCTCA 62.823 60.000 0.00 0.00 45.62 3.86
1559 1595 2.066999 ATCTCCAAGGCCGACCCTC 61.067 63.158 0.00 0.00 45.62 4.30
1561 1597 2.190578 CATCTCCAAGGCCGACCC 59.809 66.667 0.00 0.00 36.11 4.46
1562 1598 1.153349 GTCATCTCCAAGGCCGACC 60.153 63.158 0.00 0.00 0.00 4.79
1563 1599 0.036388 TTGTCATCTCCAAGGCCGAC 60.036 55.000 0.00 0.00 0.00 4.79
1564 1600 0.690192 TTTGTCATCTCCAAGGCCGA 59.310 50.000 0.00 0.00 0.00 5.54
1565 1601 1.200020 GTTTTGTCATCTCCAAGGCCG 59.800 52.381 0.00 0.00 0.00 6.13
1566 1602 1.546029 GGTTTTGTCATCTCCAAGGCC 59.454 52.381 0.00 0.00 0.00 5.19
1567 1603 2.238521 TGGTTTTGTCATCTCCAAGGC 58.761 47.619 0.00 0.00 0.00 4.35
1568 1604 4.935352 TTTGGTTTTGTCATCTCCAAGG 57.065 40.909 0.00 0.00 38.97 3.61
1610 1646 1.916874 GGGTAGAGGGAGGCTCTTTTT 59.083 52.381 15.23 1.03 32.79 1.94
1611 1647 1.081343 AGGGTAGAGGGAGGCTCTTTT 59.919 52.381 15.23 0.00 32.79 2.27
1612 1648 0.719623 AGGGTAGAGGGAGGCTCTTT 59.280 55.000 15.23 2.52 32.79 2.52
1613 1649 0.263468 GAGGGTAGAGGGAGGCTCTT 59.737 60.000 15.23 2.92 32.79 2.85
1614 1650 1.935191 GAGGGTAGAGGGAGGCTCT 59.065 63.158 15.23 0.00 35.14 4.09
1615 1651 1.529713 CGAGGGTAGAGGGAGGCTC 60.530 68.421 5.78 5.78 0.00 4.70
1616 1652 2.604152 CGAGGGTAGAGGGAGGCT 59.396 66.667 0.00 0.00 0.00 4.58
1617 1653 2.522193 CCGAGGGTAGAGGGAGGC 60.522 72.222 0.00 0.00 0.00 4.70
1618 1654 1.152715 GACCGAGGGTAGAGGGAGG 60.153 68.421 0.00 0.00 35.25 4.30
1619 1655 1.138568 TAGACCGAGGGTAGAGGGAG 58.861 60.000 0.00 0.00 35.25 4.30
1620 1656 1.830486 ATAGACCGAGGGTAGAGGGA 58.170 55.000 0.00 0.00 35.25 4.20
1621 1657 2.628657 CAAATAGACCGAGGGTAGAGGG 59.371 54.545 0.00 0.00 35.25 4.30
1622 1658 2.628657 CCAAATAGACCGAGGGTAGAGG 59.371 54.545 0.00 0.00 35.25 3.69
1623 1659 3.563223 TCCAAATAGACCGAGGGTAGAG 58.437 50.000 0.00 0.00 35.25 2.43
1624 1660 3.203710 TCTCCAAATAGACCGAGGGTAGA 59.796 47.826 0.00 0.00 35.25 2.59
1625 1661 3.563223 TCTCCAAATAGACCGAGGGTAG 58.437 50.000 0.00 0.00 35.25 3.18
1626 1662 3.675348 TCTCCAAATAGACCGAGGGTA 57.325 47.619 0.00 0.00 35.25 3.69
1627 1663 2.544844 TCTCCAAATAGACCGAGGGT 57.455 50.000 0.00 0.00 39.44 4.34
1628 1664 3.244249 GGAATCTCCAAATAGACCGAGGG 60.244 52.174 0.00 0.00 36.28 4.30
1629 1665 3.553096 CGGAATCTCCAAATAGACCGAGG 60.553 52.174 0.00 0.00 37.34 4.63
1630 1666 3.553096 CCGGAATCTCCAAATAGACCGAG 60.553 52.174 0.00 0.00 37.34 4.63
1631 1667 2.364324 CCGGAATCTCCAAATAGACCGA 59.636 50.000 0.00 0.00 37.34 4.69
1632 1668 2.548067 CCCGGAATCTCCAAATAGACCG 60.548 54.545 0.73 0.00 35.91 4.79
1633 1669 2.438392 ACCCGGAATCTCCAAATAGACC 59.562 50.000 0.73 0.00 35.91 3.85
1634 1670 3.134081 TCACCCGGAATCTCCAAATAGAC 59.866 47.826 0.73 0.00 35.91 2.59
1635 1671 3.380393 TCACCCGGAATCTCCAAATAGA 58.620 45.455 0.73 0.00 35.91 1.98
1636 1672 3.838244 TCACCCGGAATCTCCAAATAG 57.162 47.619 0.73 0.00 35.91 1.73
1637 1673 4.577988 TTTCACCCGGAATCTCCAAATA 57.422 40.909 0.73 0.00 35.91 1.40
1638 1674 3.449746 TTTCACCCGGAATCTCCAAAT 57.550 42.857 0.73 0.00 35.91 2.32
1639 1675 2.961531 TTTCACCCGGAATCTCCAAA 57.038 45.000 0.73 0.00 35.91 3.28
1640 1676 2.620367 CCATTTCACCCGGAATCTCCAA 60.620 50.000 0.73 0.00 35.91 3.53
1641 1677 1.064758 CCATTTCACCCGGAATCTCCA 60.065 52.381 0.73 0.00 35.91 3.86
1642 1678 1.680338 CCATTTCACCCGGAATCTCC 58.320 55.000 0.73 0.00 34.91 3.71
1643 1679 1.025041 GCCATTTCACCCGGAATCTC 58.975 55.000 0.73 0.00 34.91 2.75
1644 1680 0.748005 CGCCATTTCACCCGGAATCT 60.748 55.000 0.73 0.00 34.91 2.40
1645 1681 1.727467 CGCCATTTCACCCGGAATC 59.273 57.895 0.73 0.00 34.91 2.52
1646 1682 2.414785 GCGCCATTTCACCCGGAAT 61.415 57.895 0.73 0.00 34.91 3.01
1647 1683 3.059386 GCGCCATTTCACCCGGAA 61.059 61.111 0.73 0.00 0.00 4.30
1648 1684 3.969250 GAGCGCCATTTCACCCGGA 62.969 63.158 0.73 0.00 0.00 5.14
1649 1685 3.508840 GAGCGCCATTTCACCCGG 61.509 66.667 2.29 0.00 0.00 5.73
1650 1686 1.656818 ATTGAGCGCCATTTCACCCG 61.657 55.000 2.29 0.00 0.00 5.28
1651 1687 0.532115 AATTGAGCGCCATTTCACCC 59.468 50.000 2.29 0.00 0.00 4.61
1652 1688 1.202114 TCAATTGAGCGCCATTTCACC 59.798 47.619 2.29 0.00 0.00 4.02
1653 1689 2.634982 TCAATTGAGCGCCATTTCAC 57.365 45.000 2.29 0.00 0.00 3.18
1654 1690 3.429272 GGAATCAATTGAGCGCCATTTCA 60.429 43.478 14.54 0.00 0.00 2.69
1655 1691 3.118542 GGAATCAATTGAGCGCCATTTC 58.881 45.455 14.54 10.20 0.00 2.17
1656 1692 2.496871 TGGAATCAATTGAGCGCCATTT 59.503 40.909 14.54 0.98 0.00 2.32
1657 1693 2.101783 TGGAATCAATTGAGCGCCATT 58.898 42.857 14.54 1.75 0.00 3.16
1658 1694 1.406539 GTGGAATCAATTGAGCGCCAT 59.593 47.619 22.06 1.34 0.00 4.40
1659 1695 0.810648 GTGGAATCAATTGAGCGCCA 59.189 50.000 14.54 16.47 0.00 5.69
1660 1696 0.810648 TGTGGAATCAATTGAGCGCC 59.189 50.000 14.54 14.23 0.00 6.53
1661 1697 1.739466 TCTGTGGAATCAATTGAGCGC 59.261 47.619 14.54 0.00 0.00 5.92
1662 1698 2.353889 CCTCTGTGGAATCAATTGAGCG 59.646 50.000 14.54 0.00 38.35 5.03
1663 1699 2.686915 CCCTCTGTGGAATCAATTGAGC 59.313 50.000 14.54 8.29 38.35 4.26
1664 1700 2.686915 GCCCTCTGTGGAATCAATTGAG 59.313 50.000 14.54 0.00 38.35 3.02
1665 1701 2.726821 GCCCTCTGTGGAATCAATTGA 58.273 47.619 11.26 11.26 38.35 2.57
1666 1702 1.402968 CGCCCTCTGTGGAATCAATTG 59.597 52.381 0.00 0.00 38.35 2.32
1667 1703 1.755179 CGCCCTCTGTGGAATCAATT 58.245 50.000 0.00 0.00 38.35 2.32
1668 1704 0.749454 GCGCCCTCTGTGGAATCAAT 60.749 55.000 0.00 0.00 38.35 2.57
1669 1705 1.377202 GCGCCCTCTGTGGAATCAA 60.377 57.895 0.00 0.00 38.35 2.57
1670 1706 2.244117 GAGCGCCCTCTGTGGAATCA 62.244 60.000 2.29 0.00 38.35 2.57
1671 1707 1.522580 GAGCGCCCTCTGTGGAATC 60.523 63.158 2.29 0.00 38.35 2.52
1672 1708 1.992277 AGAGCGCCCTCTGTGGAAT 60.992 57.895 2.29 0.00 46.51 3.01
1673 1709 2.604686 AGAGCGCCCTCTGTGGAA 60.605 61.111 2.29 0.00 46.51 3.53
1680 1716 4.742201 TTGCACGAGAGCGCCCTC 62.742 66.667 9.18 9.18 42.48 4.30
1683 1719 3.345808 TTGTTGCACGAGAGCGCC 61.346 61.111 2.29 0.00 42.48 6.53
1684 1720 2.127609 GTTGTTGCACGAGAGCGC 60.128 61.111 0.00 0.00 42.48 5.92
1685 1721 1.771073 TTGGTTGTTGCACGAGAGCG 61.771 55.000 0.00 0.00 44.79 5.03
1686 1722 0.593128 ATTGGTTGTTGCACGAGAGC 59.407 50.000 0.00 0.00 0.00 4.09
1687 1723 1.872952 TCATTGGTTGTTGCACGAGAG 59.127 47.619 0.00 0.00 0.00 3.20
1688 1724 1.872952 CTCATTGGTTGTTGCACGAGA 59.127 47.619 0.00 0.00 0.00 4.04
1689 1725 1.603802 ACTCATTGGTTGTTGCACGAG 59.396 47.619 0.00 0.00 0.00 4.18
1690 1726 1.674359 ACTCATTGGTTGTTGCACGA 58.326 45.000 0.00 0.00 0.00 4.35
1691 1727 2.490328 AACTCATTGGTTGTTGCACG 57.510 45.000 0.00 0.00 0.00 5.34
1692 1728 3.309410 CCAAAACTCATTGGTTGTTGCAC 59.691 43.478 0.00 0.00 43.99 4.57
1693 1729 3.529533 CCAAAACTCATTGGTTGTTGCA 58.470 40.909 0.00 0.00 43.99 4.08
1702 1738 1.531149 AGACGCGTCCAAAACTCATTG 59.469 47.619 34.08 0.00 0.00 2.82
1703 1739 1.878953 AGACGCGTCCAAAACTCATT 58.121 45.000 34.08 10.11 0.00 2.57
1704 1740 2.029290 ACTAGACGCGTCCAAAACTCAT 60.029 45.455 34.08 15.74 0.00 2.90
1705 1741 1.338973 ACTAGACGCGTCCAAAACTCA 59.661 47.619 34.08 9.48 0.00 3.41
1706 1742 1.719780 CACTAGACGCGTCCAAAACTC 59.280 52.381 34.08 9.03 0.00 3.01
1707 1743 1.604693 CCACTAGACGCGTCCAAAACT 60.605 52.381 34.08 17.97 0.00 2.66
1708 1744 0.788391 CCACTAGACGCGTCCAAAAC 59.212 55.000 34.08 10.65 0.00 2.43
1738 1774 2.844839 GGCTAGCGATCCCAGGGT 60.845 66.667 9.00 0.00 0.00 4.34
2080 2127 3.564511 CGATTGCGTTTGGATCTGTTTT 58.435 40.909 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.