Multiple sequence alignment - TraesCS4B01G193300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G193300 chr4B 100.000 5255 0 0 1 5255 416441271 416436017 0.000000e+00 9705
1 TraesCS4B01G193300 chr4B 87.121 132 16 1 4730 4860 416307264 416307395 1.180000e-31 148
2 TraesCS4B01G193300 chr4B 92.308 104 7 1 699 801 608669008 608668905 4.240000e-31 147
3 TraesCS4B01G193300 chr4D 93.901 3361 144 29 1519 4858 337259654 337256334 0.000000e+00 5014
4 TraesCS4B01G193300 chr4D 90.559 1324 52 28 1 1312 337261158 337259896 0.000000e+00 1685
5 TraesCS4B01G193300 chr4A 94.083 2180 91 22 2710 4859 135357234 135359405 0.000000e+00 3277
6 TraesCS4B01G193300 chr4A 97.268 1208 29 4 1513 2718 135355761 135356966 0.000000e+00 2045
7 TraesCS4B01G193300 chr4A 89.402 1538 89 34 1 1512 135354242 135355731 0.000000e+00 1869
8 TraesCS4B01G193300 chr4A 97.275 367 10 0 4889 5255 717416958 717416592 1.610000e-174 623
9 TraesCS4B01G193300 chr4A 97.500 360 9 0 4896 5255 717379692 717379333 2.690000e-172 616
10 TraesCS4B01G193300 chr2B 98.333 360 6 0 4896 5255 676039768 676039409 2.670000e-177 632
11 TraesCS4B01G193300 chr2B 97.500 360 9 0 4896 5255 590557450 590557091 2.690000e-172 616
12 TraesCS4B01G193300 chr2B 92.233 103 5 3 699 801 258656170 258656071 5.490000e-30 143
13 TraesCS4B01G193300 chr3B 97.778 360 8 0 4896 5255 155406191 155406550 5.780000e-174 621
14 TraesCS4B01G193300 chr3B 97.500 360 9 0 4896 5255 155394498 155394857 2.690000e-172 616
15 TraesCS4B01G193300 chr7B 97.222 360 10 0 4896 5255 497247886 497247527 1.250000e-170 610
16 TraesCS4B01G193300 chr6B 97.222 360 10 0 4896 5255 616001409 616001050 1.250000e-170 610
17 TraesCS4B01G193300 chr5B 97.222 360 10 0 4896 5255 41541526 41541167 1.250000e-170 610
18 TraesCS4B01G193300 chr5A 89.474 133 13 1 4729 4860 637059890 637060022 3.260000e-37 167
19 TraesCS4B01G193300 chr5A 92.453 106 5 2 699 804 662731561 662731663 1.180000e-31 148
20 TraesCS4B01G193300 chr2A 89.474 133 13 1 4729 4860 697069427 697069559 3.260000e-37 167
21 TraesCS4B01G193300 chr6A 88.722 133 14 1 4729 4860 569685420 569685288 1.510000e-35 161
22 TraesCS4B01G193300 chr1A 94.792 96 5 0 697 792 335544594 335544499 3.280000e-32 150
23 TraesCS4B01G193300 chr1D 92.381 105 6 2 697 801 267593029 267593131 1.180000e-31 148
24 TraesCS4B01G193300 chr5D 93.000 100 6 1 707 805 545224408 545224507 1.530000e-30 145
25 TraesCS4B01G193300 chr6D 92.157 102 3 3 705 806 82588545 82588641 7.100000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G193300 chr4B 416436017 416441271 5254 True 9705.0 9705 100.000000 1 5255 1 chr4B.!!$R1 5254
1 TraesCS4B01G193300 chr4D 337256334 337261158 4824 True 3349.5 5014 92.230000 1 4858 2 chr4D.!!$R1 4857
2 TraesCS4B01G193300 chr4A 135354242 135359405 5163 False 2397.0 3277 93.584333 1 4859 3 chr4A.!!$F1 4858

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
703 718 0.037303 CTGTGTGCCCCTGAACATCT 59.963 55.0 0.0 0.0 0.00 2.90 F
1372 1398 0.250684 TGCCATTGCTTTCCGTCTCA 60.251 50.0 0.0 0.0 38.71 3.27 F
1888 1997 0.035317 AGGTTTGCATCTCACGCTCA 59.965 50.0 0.0 0.0 0.00 4.26 F
3253 3643 0.321653 AAAACGAAGCGAGAGGGCAT 60.322 50.0 0.0 0.0 34.64 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1825 1934 0.378257 CATGCACATCCGCTTGTACC 59.622 55.000 0.0 0.0 33.58 3.34 R
3307 3697 1.069703 CGCTCATGGTGTTGACTTGTG 60.070 52.381 0.0 0.0 0.00 3.33 R
3308 3698 1.229428 CGCTCATGGTGTTGACTTGT 58.771 50.000 0.0 0.0 0.00 3.16 R
5177 5602 0.033601 ACCACGAGATCAGAGAGGCT 60.034 55.000 0.0 0.0 0.00 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 47 2.577059 CGGAGGCGCAGGAAAGTA 59.423 61.111 10.83 0.00 0.00 2.24
45 49 1.295423 GGAGGCGCAGGAAAGTACA 59.705 57.895 10.83 0.00 0.00 2.90
57 61 2.076863 GAAAGTACAACCATCAGCGCT 58.923 47.619 2.64 2.64 0.00 5.92
219 223 2.665603 GCGGACAAGAAGGGCTCT 59.334 61.111 0.00 0.00 35.13 4.09
512 522 4.259810 CGCCATACATTTCAACGAGTACTG 60.260 45.833 0.00 0.00 0.00 2.74
513 523 4.868171 GCCATACATTTCAACGAGTACTGA 59.132 41.667 0.00 0.00 0.00 3.41
514 524 5.523916 GCCATACATTTCAACGAGTACTGAT 59.476 40.000 0.00 0.00 0.00 2.90
515 525 6.037172 GCCATACATTTCAACGAGTACTGATT 59.963 38.462 0.00 0.00 0.00 2.57
516 526 7.223971 GCCATACATTTCAACGAGTACTGATTA 59.776 37.037 0.00 0.00 0.00 1.75
517 527 9.093970 CCATACATTTCAACGAGTACTGATTAA 57.906 33.333 0.00 0.00 0.00 1.40
520 530 8.771920 ACATTTCAACGAGTACTGATTAATCA 57.228 30.769 17.07 17.07 35.16 2.57
521 531 9.214957 ACATTTCAACGAGTACTGATTAATCAA 57.785 29.630 18.47 2.75 36.18 2.57
522 532 9.694520 CATTTCAACGAGTACTGATTAATCAAG 57.305 33.333 18.47 14.30 36.18 3.02
523 533 6.887376 TCAACGAGTACTGATTAATCAAGC 57.113 37.500 18.47 11.33 36.18 4.01
524 534 5.810587 TCAACGAGTACTGATTAATCAAGCC 59.189 40.000 18.47 9.14 36.18 4.35
525 535 5.599999 ACGAGTACTGATTAATCAAGCCT 57.400 39.130 18.47 13.23 36.18 4.58
526 536 5.352284 ACGAGTACTGATTAATCAAGCCTG 58.648 41.667 18.47 9.41 36.18 4.85
527 537 5.105310 ACGAGTACTGATTAATCAAGCCTGT 60.105 40.000 18.47 14.25 36.18 4.00
528 538 5.812642 CGAGTACTGATTAATCAAGCCTGTT 59.187 40.000 18.47 0.08 36.18 3.16
529 539 6.313905 CGAGTACTGATTAATCAAGCCTGTTT 59.686 38.462 18.47 5.67 36.18 2.83
530 540 7.383102 AGTACTGATTAATCAAGCCTGTTTG 57.617 36.000 18.47 6.78 36.18 2.93
554 564 3.462483 TTCTCTGCGTGGTTCTGTAAA 57.538 42.857 0.00 0.00 0.00 2.01
614 628 2.747446 GCACAGGAATACACCGTGATTT 59.253 45.455 5.28 0.00 36.96 2.17
618 632 5.410132 CACAGGAATACACCGTGATTTGTAA 59.590 40.000 5.28 0.00 36.96 2.41
639 653 8.804688 TGTAAGAATTAAACCCAACGATTTTG 57.195 30.769 0.00 0.00 28.70 2.44
640 654 6.779115 AAGAATTAAACCCAACGATTTTGC 57.221 33.333 0.00 0.00 0.00 3.68
658 672 9.651718 CGATTTTGCTGGAGTATTATAGAAAAC 57.348 33.333 0.00 0.00 0.00 2.43
659 673 9.651718 GATTTTGCTGGAGTATTATAGAAAACG 57.348 33.333 0.00 0.00 0.00 3.60
662 676 8.556213 TTGCTGGAGTATTATAGAAAACGTTT 57.444 30.769 7.96 7.96 0.00 3.60
663 677 8.193250 TGCTGGAGTATTATAGAAAACGTTTC 57.807 34.615 15.01 8.08 0.00 2.78
664 678 7.820386 TGCTGGAGTATTATAGAAAACGTTTCA 59.180 33.333 15.01 3.18 0.00 2.69
665 679 8.827677 GCTGGAGTATTATAGAAAACGTTTCAT 58.172 33.333 15.01 10.45 0.00 2.57
691 706 7.639945 AGATGTTAAGTAACTTTTCTGTGTGC 58.360 34.615 3.07 0.00 37.12 4.57
692 707 6.126568 TGTTAAGTAACTTTTCTGTGTGCC 57.873 37.500 3.07 0.00 37.12 5.01
693 708 5.066764 TGTTAAGTAACTTTTCTGTGTGCCC 59.933 40.000 3.07 0.00 37.12 5.36
694 709 2.583143 AGTAACTTTTCTGTGTGCCCC 58.417 47.619 0.00 0.00 0.00 5.80
701 716 0.478072 TTCTGTGTGCCCCTGAACAT 59.522 50.000 0.00 0.00 0.00 2.71
703 718 0.037303 CTGTGTGCCCCTGAACATCT 59.963 55.000 0.00 0.00 0.00 2.90
714 729 3.005554 CCTGAACATCTAAGTGGCTGTG 58.994 50.000 0.00 0.00 0.00 3.66
778 793 2.401766 CGAATCCCAGCAGCCACAC 61.402 63.158 0.00 0.00 0.00 3.82
789 804 2.162681 GCAGCCACACCTCACTATTTT 58.837 47.619 0.00 0.00 0.00 1.82
790 805 2.558359 GCAGCCACACCTCACTATTTTT 59.442 45.455 0.00 0.00 0.00 1.94
817 832 7.936496 TTTTTGCTTTTCCAATCCTTCTTTT 57.064 28.000 0.00 0.00 0.00 2.27
822 837 8.415950 TGCTTTTCCAATCCTTCTTTTACATA 57.584 30.769 0.00 0.00 0.00 2.29
823 838 8.865090 TGCTTTTCCAATCCTTCTTTTACATAA 58.135 29.630 0.00 0.00 0.00 1.90
824 839 9.140286 GCTTTTCCAATCCTTCTTTTACATAAC 57.860 33.333 0.00 0.00 0.00 1.89
825 840 9.341899 CTTTTCCAATCCTTCTTTTACATAACG 57.658 33.333 0.00 0.00 0.00 3.18
826 841 6.431198 TCCAATCCTTCTTTTACATAACGC 57.569 37.500 0.00 0.00 0.00 4.84
827 842 6.177610 TCCAATCCTTCTTTTACATAACGCT 58.822 36.000 0.00 0.00 0.00 5.07
828 843 6.093495 TCCAATCCTTCTTTTACATAACGCTG 59.907 38.462 0.00 0.00 0.00 5.18
853 868 4.051922 CGATTAACGGCTCTGATTAGCTT 58.948 43.478 0.00 0.00 42.37 3.74
854 869 5.220381 CGATTAACGGCTCTGATTAGCTTA 58.780 41.667 0.00 0.00 42.37 3.09
855 870 5.343593 CGATTAACGGCTCTGATTAGCTTAG 59.656 44.000 0.00 0.00 42.37 2.18
856 871 2.517650 ACGGCTCTGATTAGCTTAGC 57.482 50.000 0.00 0.00 42.37 3.09
857 872 2.035632 ACGGCTCTGATTAGCTTAGCT 58.964 47.619 12.67 12.67 42.37 3.32
869 884 1.342819 AGCTTAGCTCTTATGGAGGCG 59.657 52.381 0.00 0.00 42.08 5.52
887 902 2.667418 CTGACAGCCAGACCCCAG 59.333 66.667 0.00 0.00 45.78 4.45
903 918 2.660552 AGACCGTTTGCACGTCGG 60.661 61.111 17.87 17.87 45.62 4.79
922 937 2.287194 CCCCACCCATCCCCTCTT 60.287 66.667 0.00 0.00 0.00 2.85
924 939 1.308216 CCCACCCATCCCCTCTTCT 60.308 63.158 0.00 0.00 0.00 2.85
926 941 1.348775 CCACCCATCCCCTCTTCTCC 61.349 65.000 0.00 0.00 0.00 3.71
983 1008 4.416601 CCCCCGGTCCCTCTCCTT 62.417 72.222 0.00 0.00 0.00 3.36
997 1022 1.160137 CTCCTTTGGAGTTTCTGCGG 58.840 55.000 5.50 0.00 44.25 5.69
1089 1115 2.429610 CCCCTTTTCCTCGTCTAATCGA 59.570 50.000 0.00 0.00 38.19 3.59
1334 1360 1.671328 CGCTCCATTCTCTCTACGTGA 59.329 52.381 0.00 0.00 0.00 4.35
1344 1370 7.095857 CCATTCTCTCTACGTGATAATTTGCTC 60.096 40.741 0.00 0.00 0.00 4.26
1345 1371 6.451064 TCTCTCTACGTGATAATTTGCTCA 57.549 37.500 0.00 0.00 0.00 4.26
1348 1374 3.796717 TCTACGTGATAATTTGCTCAGCG 59.203 43.478 0.00 0.00 0.00 5.18
1349 1375 2.346803 ACGTGATAATTTGCTCAGCGT 58.653 42.857 0.00 0.00 0.00 5.07
1350 1376 2.742053 ACGTGATAATTTGCTCAGCGTT 59.258 40.909 0.00 0.00 30.57 4.84
1351 1377 3.093574 CGTGATAATTTGCTCAGCGTTG 58.906 45.455 0.00 0.00 0.00 4.10
1352 1378 3.429085 GTGATAATTTGCTCAGCGTTGG 58.571 45.455 0.00 0.00 0.00 3.77
1372 1398 0.250684 TGCCATTGCTTTCCGTCTCA 60.251 50.000 0.00 0.00 38.71 3.27
1374 1400 1.813513 CCATTGCTTTCCGTCTCAGT 58.186 50.000 0.00 0.00 0.00 3.41
1392 1425 6.426328 GTCTCAGTTGTGAATTTGATGTCTCT 59.574 38.462 0.00 0.00 30.14 3.10
1434 1467 1.315690 AATGCGGGCTCATCTGATTG 58.684 50.000 0.00 0.00 0.00 2.67
1445 1478 4.142004 GCTCATCTGATTGGGCTTTGAAAT 60.142 41.667 5.16 0.00 40.09 2.17
1449 1482 3.004862 CTGATTGGGCTTTGAAATTGCC 58.995 45.455 0.00 0.00 45.42 4.52
1491 1554 9.974980 TTTTTAATGGATCACTACTTTGAAACC 57.025 29.630 0.00 0.00 0.00 3.27
1576 1685 4.288366 TCCATGAGTAAGTTGGGTGATTCA 59.712 41.667 0.00 0.00 0.00 2.57
1623 1732 6.339194 TGAATGTTAATAACCATGTCGTCG 57.661 37.500 0.18 0.00 0.00 5.12
1633 1742 2.036217 ACCATGTCGTCGACCAAAACTA 59.964 45.455 22.05 2.32 0.00 2.24
1672 1781 5.476945 GGATTCTGTGTGGGTCTTTATTGTT 59.523 40.000 0.00 0.00 0.00 2.83
1759 1868 2.551071 CGCTTTGAAGGAGGGAAAGAGT 60.551 50.000 0.00 0.00 0.00 3.24
1867 1976 3.822735 CTGTTTTCTTGGATCTTCCTGCA 59.177 43.478 0.00 0.00 37.46 4.41
1888 1997 0.035317 AGGTTTGCATCTCACGCTCA 59.965 50.000 0.00 0.00 0.00 4.26
2113 2222 0.962855 GTCAGAAGAGCAAAGGGCCC 60.963 60.000 16.46 16.46 46.50 5.80
2307 2416 5.775195 AGTTGGATAACCTGAAGGAAAAAGG 59.225 40.000 2.62 0.00 37.52 3.11
2380 2489 4.555511 GCATTTCCATCGATTTCTACTGCC 60.556 45.833 0.00 0.00 0.00 4.85
2654 2763 9.541143 CCAACTGGTAATTATTTTTGTCACTTT 57.459 29.630 0.00 0.00 0.00 2.66
2676 2785 3.932710 TCAATTCTTACGATGTGCAGGTC 59.067 43.478 0.00 0.00 0.00 3.85
2813 3203 3.832490 AGCAAAAATTGTTAGGACCCTCC 59.168 43.478 0.00 0.00 36.58 4.30
2815 3205 4.082190 GCAAAAATTGTTAGGACCCTCCTC 60.082 45.833 0.00 0.00 45.66 3.71
3129 3519 6.346120 CGTTCTTCGTGAGGCATATAATTCAG 60.346 42.308 0.00 0.00 34.52 3.02
3253 3643 0.321653 AAAACGAAGCGAGAGGGCAT 60.322 50.000 0.00 0.00 34.64 4.40
3307 3697 7.150783 AGTTGCTTCCATCTATTTTGACTTC 57.849 36.000 0.00 0.00 0.00 3.01
3308 3698 6.716628 AGTTGCTTCCATCTATTTTGACTTCA 59.283 34.615 0.00 0.00 0.00 3.02
3385 3775 1.288188 TGGGTTCATCTGATGCTCCA 58.712 50.000 22.40 19.62 0.00 3.86
3423 3813 4.022849 GGAAGACAACAAGAAGAATGGTGG 60.023 45.833 0.00 0.00 39.84 4.61
3457 3847 2.153898 CTTGGGGATCCTGGGCACAA 62.154 60.000 12.58 6.97 0.00 3.33
3841 4231 7.248743 ACTGCTATAACCCAGTGTTTAACTA 57.751 36.000 0.00 0.00 40.55 2.24
4035 4425 5.987347 CAGTGCATTTTTCCTTGATTCTGTT 59.013 36.000 0.00 0.00 0.00 3.16
4050 4440 2.959516 TCTGTTGATGTCATGGACGAC 58.040 47.619 0.00 0.00 34.95 4.34
4149 4539 1.744320 GCGCCCACCCAAATATTCCC 61.744 60.000 0.00 0.00 0.00 3.97
4169 4559 1.402968 CAAGCTCAAATCCCACATCGG 59.597 52.381 0.00 0.00 0.00 4.18
4235 4625 0.859232 CTGTTGTCAGTTTCGACGGG 59.141 55.000 0.00 0.00 38.84 5.28
4297 4687 7.180079 CACTATCCTTGTAAGCACATTTTACG 58.820 38.462 0.00 0.00 34.51 3.18
4324 4714 2.027385 GCTTTTAGAAGGATGGGCCAG 58.973 52.381 13.78 0.00 40.02 4.85
4347 4737 4.868450 TCGAGGTTTATTTTGTATGGCG 57.132 40.909 0.00 0.00 0.00 5.69
4372 4762 2.611974 ACTTGCGCAAACTTATTCCG 57.388 45.000 25.01 11.34 0.00 4.30
4400 4790 5.978919 TCAGCTGAGCTTTTTGTAAATGTTG 59.021 36.000 13.74 0.00 36.40 3.33
4407 4797 6.223120 AGCTTTTTGTAAATGTTGATGTCCC 58.777 36.000 0.00 0.00 0.00 4.46
4412 4802 8.970859 TTTTGTAAATGTTGATGTCCCATTTT 57.029 26.923 10.84 0.00 39.04 1.82
4432 4822 2.009051 TGCACTCGATATGGTTTGCTG 58.991 47.619 12.09 0.00 0.00 4.41
4472 4863 2.413837 CTTTGGGTTGACCTACTCACG 58.586 52.381 0.00 0.00 41.11 4.35
4492 4883 3.454812 ACGAACATTGTTAGGGATAGCCT 59.545 43.478 13.21 0.00 0.00 4.58
4496 4887 1.200519 TTGTTAGGGATAGCCTGCGT 58.799 50.000 0.00 0.00 0.00 5.24
4504 4895 0.107654 GATAGCCTGCGTGGGAAAGT 60.108 55.000 0.12 0.00 36.00 2.66
4530 4921 1.006832 GAATGACATAGTGGCGCGTT 58.993 50.000 8.43 0.00 0.00 4.84
4635 5039 1.871772 CTGCAAGCCAGGAAGAACG 59.128 57.895 0.00 0.00 37.93 3.95
4636 5040 0.886490 CTGCAAGCCAGGAAGAACGT 60.886 55.000 0.00 0.00 37.93 3.99
4637 5041 0.394938 TGCAAGCCAGGAAGAACGTA 59.605 50.000 0.00 0.00 0.00 3.57
4638 5042 1.079503 GCAAGCCAGGAAGAACGTAG 58.920 55.000 0.00 0.00 0.00 3.51
4639 5043 1.726853 CAAGCCAGGAAGAACGTAGG 58.273 55.000 0.00 0.00 0.00 3.18
4640 5044 1.275291 CAAGCCAGGAAGAACGTAGGA 59.725 52.381 0.00 0.00 0.00 2.94
4641 5045 1.640917 AGCCAGGAAGAACGTAGGAA 58.359 50.000 0.00 0.00 0.00 3.36
4642 5046 1.550976 AGCCAGGAAGAACGTAGGAAG 59.449 52.381 0.00 0.00 0.00 3.46
4662 5066 7.504403 AGGAAGATATGTTCATGTAGGTTCAG 58.496 38.462 14.01 0.00 0.00 3.02
4694 5098 2.028930 CCAGACAGTTCAGTCAGGTACC 60.029 54.545 2.73 2.73 39.54 3.34
4695 5099 2.028930 CAGACAGTTCAGTCAGGTACCC 60.029 54.545 8.74 0.00 40.98 3.69
4696 5100 1.275573 GACAGTTCAGTCAGGTACCCC 59.724 57.143 8.74 0.00 38.40 4.95
4698 5102 1.697432 CAGTTCAGTCAGGTACCCCAA 59.303 52.381 8.74 0.00 0.00 4.12
4699 5103 1.697982 AGTTCAGTCAGGTACCCCAAC 59.302 52.381 8.74 4.48 0.00 3.77
4700 5104 1.697982 GTTCAGTCAGGTACCCCAACT 59.302 52.381 8.74 6.95 31.25 3.16
4702 5106 1.697432 TCAGTCAGGTACCCCAACTTG 59.303 52.381 8.74 0.00 29.30 3.16
4704 5108 0.109723 GTCAGGTACCCCAACTTGCA 59.890 55.000 8.74 0.00 0.00 4.08
4705 5109 1.072266 TCAGGTACCCCAACTTGCAT 58.928 50.000 8.74 0.00 0.00 3.96
4706 5110 1.176527 CAGGTACCCCAACTTGCATG 58.823 55.000 8.74 0.00 0.00 4.06
4708 5112 1.427368 AGGTACCCCAACTTGCATGAA 59.573 47.619 8.74 0.00 0.00 2.57
4709 5113 2.158385 AGGTACCCCAACTTGCATGAAA 60.158 45.455 8.74 0.00 0.00 2.69
4710 5114 2.831526 GGTACCCCAACTTGCATGAAAT 59.168 45.455 6.60 0.00 0.00 2.17
4742 5167 3.030291 AGTTTCAACCCAACTTGCATGA 58.970 40.909 6.60 0.00 29.75 3.07
4795 5220 1.272480 GCAACTTCACCCTACCCCAAT 60.272 52.381 0.00 0.00 0.00 3.16
4801 5226 1.360852 TCACCCTACCCCAATTTGCAT 59.639 47.619 0.00 0.00 0.00 3.96
4846 5271 2.871133 CCTATCACAACGCGACAAGTA 58.129 47.619 15.93 0.00 0.00 2.24
4868 5293 4.988598 CCAGGTGGCGCGACAAGT 62.989 66.667 20.67 2.91 0.00 3.16
4869 5294 3.716006 CAGGTGGCGCGACAAGTG 61.716 66.667 20.67 14.29 0.00 3.16
4870 5295 4.988598 AGGTGGCGCGACAAGTGG 62.989 66.667 20.67 0.00 0.00 4.00
4877 5302 3.730761 GCGACAAGTGGCAGCCAG 61.731 66.667 16.83 5.91 32.34 4.85
4878 5303 3.052082 CGACAAGTGGCAGCCAGG 61.052 66.667 16.83 10.40 32.34 4.45
4879 5304 2.113986 GACAAGTGGCAGCCAGGT 59.886 61.111 16.83 13.96 32.34 4.00
4880 5305 2.203394 ACAAGTGGCAGCCAGGTG 60.203 61.111 16.83 18.20 32.34 4.00
4881 5306 2.987547 CAAGTGGCAGCCAGGTGG 60.988 66.667 16.83 0.00 32.34 4.61
4891 5316 3.252284 CCAGGTGGCCAGACTGGT 61.252 66.667 33.68 5.60 45.21 4.00
4892 5317 2.348998 CAGGTGGCCAGACTGGTC 59.651 66.667 23.58 19.70 43.98 4.02
4897 5322 2.741092 GGCCAGACTGGTCGTTGA 59.259 61.111 22.58 0.00 40.46 3.18
4898 5323 1.374758 GGCCAGACTGGTCGTTGAG 60.375 63.158 22.58 0.00 40.46 3.02
4899 5324 1.374758 GCCAGACTGGTCGTTGAGG 60.375 63.158 22.58 0.00 40.46 3.86
4900 5325 1.293498 CCAGACTGGTCGTTGAGGG 59.707 63.158 13.84 0.00 31.35 4.30
4901 5326 1.185618 CCAGACTGGTCGTTGAGGGA 61.186 60.000 13.84 0.00 31.35 4.20
4902 5327 0.244994 CAGACTGGTCGTTGAGGGAG 59.755 60.000 0.00 0.00 34.09 4.30
4903 5328 0.178958 AGACTGGTCGTTGAGGGAGT 60.179 55.000 0.00 0.00 34.09 3.85
4904 5329 0.244178 GACTGGTCGTTGAGGGAGTC 59.756 60.000 0.00 0.00 0.00 3.36
4905 5330 1.186267 ACTGGTCGTTGAGGGAGTCC 61.186 60.000 0.00 0.00 0.00 3.85
4907 5332 1.185618 TGGTCGTTGAGGGAGTCCTG 61.186 60.000 9.58 0.00 45.05 3.86
4908 5333 1.592223 GTCGTTGAGGGAGTCCTGG 59.408 63.158 9.58 0.00 45.05 4.45
4909 5334 0.898789 GTCGTTGAGGGAGTCCTGGA 60.899 60.000 9.58 0.00 45.05 3.86
4910 5335 0.041238 TCGTTGAGGGAGTCCTGGAT 59.959 55.000 9.58 0.00 45.05 3.41
4911 5336 1.286849 TCGTTGAGGGAGTCCTGGATA 59.713 52.381 9.58 0.00 45.05 2.59
4912 5337 2.108168 CGTTGAGGGAGTCCTGGATAA 58.892 52.381 9.58 0.00 45.05 1.75
4913 5338 2.101582 CGTTGAGGGAGTCCTGGATAAG 59.898 54.545 9.58 0.00 45.05 1.73
4925 5350 3.801034 GGATAAGGGGGTATCCGGA 57.199 57.895 6.61 6.61 40.10 5.14
4926 5351 1.273759 GGATAAGGGGGTATCCGGAC 58.726 60.000 6.12 0.00 40.10 4.79
4927 5352 1.203275 GGATAAGGGGGTATCCGGACT 60.203 57.143 6.12 0.00 40.10 3.85
4928 5353 1.900486 GATAAGGGGGTATCCGGACTG 59.100 57.143 6.12 0.00 36.01 3.51
4929 5354 0.761702 TAAGGGGGTATCCGGACTGC 60.762 60.000 6.12 0.00 36.01 4.40
4930 5355 3.557290 GGGGGTATCCGGACTGCC 61.557 72.222 6.12 9.47 36.01 4.85
4944 5369 4.868314 GGACTGCCGGACTATATACTTT 57.132 45.455 5.05 0.00 0.00 2.66
4945 5370 4.557205 GGACTGCCGGACTATATACTTTG 58.443 47.826 5.05 0.00 0.00 2.77
4946 5371 4.557205 GACTGCCGGACTATATACTTTGG 58.443 47.826 5.05 0.00 0.00 3.28
4947 5372 3.244112 ACTGCCGGACTATATACTTTGGC 60.244 47.826 5.05 0.00 41.56 4.52
4948 5373 2.038033 TGCCGGACTATATACTTTGGCC 59.962 50.000 5.05 0.00 40.49 5.36
4949 5374 2.929592 GCCGGACTATATACTTTGGCCG 60.930 54.545 5.05 6.96 35.24 6.13
4950 5375 2.955614 CGGACTATATACTTTGGCCGG 58.044 52.381 6.17 0.00 34.29 6.13
4951 5376 2.559668 CGGACTATATACTTTGGCCGGA 59.440 50.000 5.05 0.00 34.29 5.14
4952 5377 3.613432 CGGACTATATACTTTGGCCGGAC 60.613 52.174 5.05 0.56 34.29 4.79
4953 5378 3.577415 GGACTATATACTTTGGCCGGACT 59.423 47.826 9.82 0.00 0.00 3.85
4954 5379 4.557205 GACTATATACTTTGGCCGGACTG 58.443 47.826 9.82 0.54 0.00 3.51
4955 5380 3.965347 ACTATATACTTTGGCCGGACTGT 59.035 43.478 9.82 7.70 0.00 3.55
4956 5381 3.926058 ATATACTTTGGCCGGACTGTT 57.074 42.857 9.82 0.00 0.00 3.16
4957 5382 1.821216 ATACTTTGGCCGGACTGTTG 58.179 50.000 9.82 0.00 0.00 3.33
4958 5383 0.250553 TACTTTGGCCGGACTGTTGG 60.251 55.000 9.82 0.00 0.00 3.77
4959 5384 1.228124 CTTTGGCCGGACTGTTGGA 60.228 57.895 9.82 0.00 0.00 3.53
4960 5385 1.515521 CTTTGGCCGGACTGTTGGAC 61.516 60.000 9.82 1.90 0.00 4.02
4961 5386 1.990160 TTTGGCCGGACTGTTGGACT 61.990 55.000 9.82 0.00 33.02 3.85
4962 5387 1.122632 TTGGCCGGACTGTTGGACTA 61.123 55.000 9.82 0.00 33.02 2.59
4963 5388 0.907704 TGGCCGGACTGTTGGACTAT 60.908 55.000 9.82 0.00 33.02 2.12
4964 5389 0.462047 GGCCGGACTGTTGGACTATG 60.462 60.000 5.05 0.00 0.00 2.23
4965 5390 0.535335 GCCGGACTGTTGGACTATGA 59.465 55.000 5.05 0.00 0.00 2.15
4966 5391 1.066430 GCCGGACTGTTGGACTATGAA 60.066 52.381 5.05 0.00 0.00 2.57
4967 5392 2.893637 CCGGACTGTTGGACTATGAAG 58.106 52.381 0.00 0.00 0.00 3.02
4968 5393 2.496070 CCGGACTGTTGGACTATGAAGA 59.504 50.000 0.00 0.00 0.00 2.87
4969 5394 3.133003 CCGGACTGTTGGACTATGAAGAT 59.867 47.826 0.00 0.00 0.00 2.40
4970 5395 4.341235 CCGGACTGTTGGACTATGAAGATA 59.659 45.833 0.00 0.00 0.00 1.98
4971 5396 5.282510 CGGACTGTTGGACTATGAAGATAC 58.717 45.833 0.00 0.00 0.00 2.24
4972 5397 5.163550 CGGACTGTTGGACTATGAAGATACA 60.164 44.000 0.00 0.00 0.00 2.29
4973 5398 6.627287 CGGACTGTTGGACTATGAAGATACAA 60.627 42.308 0.00 0.00 0.00 2.41
4974 5399 6.758886 GGACTGTTGGACTATGAAGATACAAG 59.241 42.308 0.00 0.00 0.00 3.16
4975 5400 7.363880 GGACTGTTGGACTATGAAGATACAAGA 60.364 40.741 0.00 0.00 0.00 3.02
4976 5401 7.324178 ACTGTTGGACTATGAAGATACAAGAC 58.676 38.462 0.00 0.00 0.00 3.01
4977 5402 7.039011 ACTGTTGGACTATGAAGATACAAGACA 60.039 37.037 0.00 0.00 0.00 3.41
4978 5403 7.323420 TGTTGGACTATGAAGATACAAGACAG 58.677 38.462 0.00 0.00 0.00 3.51
4979 5404 7.178451 TGTTGGACTATGAAGATACAAGACAGA 59.822 37.037 0.00 0.00 0.00 3.41
4980 5405 7.718334 TGGACTATGAAGATACAAGACAGAA 57.282 36.000 0.00 0.00 0.00 3.02
4981 5406 7.776107 TGGACTATGAAGATACAAGACAGAAG 58.224 38.462 0.00 0.00 0.00 2.85
4982 5407 7.615757 TGGACTATGAAGATACAAGACAGAAGA 59.384 37.037 0.00 0.00 0.00 2.87
4983 5408 7.918562 GGACTATGAAGATACAAGACAGAAGAC 59.081 40.741 0.00 0.00 0.00 3.01
4984 5409 8.588290 ACTATGAAGATACAAGACAGAAGACT 57.412 34.615 0.00 0.00 0.00 3.24
4985 5410 9.030452 ACTATGAAGATACAAGACAGAAGACTT 57.970 33.333 0.00 0.00 0.00 3.01
4986 5411 9.515020 CTATGAAGATACAAGACAGAAGACTTC 57.485 37.037 7.14 7.14 34.03 3.01
4987 5412 6.382608 TGAAGATACAAGACAGAAGACTTCG 58.617 40.000 9.53 7.40 35.49 3.79
4988 5413 5.968528 AGATACAAGACAGAAGACTTCGT 57.031 39.130 9.53 10.34 34.02 3.85
4989 5414 5.945155 AGATACAAGACAGAAGACTTCGTC 58.055 41.667 22.01 22.01 35.18 4.20
4990 5415 3.372660 ACAAGACAGAAGACTTCGTCC 57.627 47.619 24.06 12.92 35.38 4.79
4991 5416 2.036089 ACAAGACAGAAGACTTCGTCCC 59.964 50.000 24.06 11.63 35.38 4.46
4992 5417 0.882474 AGACAGAAGACTTCGTCCCG 59.118 55.000 24.06 11.03 35.38 5.14
4993 5418 0.597072 GACAGAAGACTTCGTCCCGT 59.403 55.000 20.28 10.89 32.18 5.28
4994 5419 0.314302 ACAGAAGACTTCGTCCCGTG 59.686 55.000 9.53 4.21 32.18 4.94
4995 5420 0.314302 CAGAAGACTTCGTCCCGTGT 59.686 55.000 9.53 0.00 32.18 4.49
4996 5421 0.597072 AGAAGACTTCGTCCCGTGTC 59.403 55.000 9.53 0.00 32.18 3.67
4997 5422 0.388263 GAAGACTTCGTCCCGTGTCC 60.388 60.000 0.00 0.00 34.39 4.02
4998 5423 2.126580 GACTTCGTCCCGTGTCCG 60.127 66.667 0.00 0.00 0.00 4.79
5012 5437 3.440023 TCCGGATGGGACTCTCCT 58.560 61.111 0.00 0.00 40.94 3.69
5013 5438 1.704082 TCCGGATGGGACTCTCCTT 59.296 57.895 0.00 0.00 40.94 3.36
5014 5439 0.687757 TCCGGATGGGACTCTCCTTG 60.688 60.000 0.00 0.00 40.94 3.61
5015 5440 1.690219 CCGGATGGGACTCTCCTTGG 61.690 65.000 0.00 0.00 38.47 3.61
5016 5441 1.529309 GGATGGGACTCTCCTTGGC 59.471 63.158 0.00 0.00 36.57 4.52
5017 5442 1.144936 GATGGGACTCTCCTTGGCG 59.855 63.158 0.00 0.00 36.57 5.69
5018 5443 1.613630 ATGGGACTCTCCTTGGCGT 60.614 57.895 0.00 0.00 36.57 5.68
5019 5444 1.903877 ATGGGACTCTCCTTGGCGTG 61.904 60.000 0.00 0.00 36.57 5.34
5020 5445 2.266055 GGACTCTCCTTGGCGTGG 59.734 66.667 0.00 0.00 32.53 4.94
5021 5446 2.283529 GGACTCTCCTTGGCGTGGA 61.284 63.158 0.00 0.00 32.53 4.02
5022 5447 1.671742 GACTCTCCTTGGCGTGGAA 59.328 57.895 0.17 0.00 32.61 3.53
5023 5448 0.390472 GACTCTCCTTGGCGTGGAAG 60.390 60.000 0.17 3.93 32.61 3.46
5024 5449 1.078848 CTCTCCTTGGCGTGGAAGG 60.079 63.158 0.00 0.00 41.36 3.46
5033 5458 2.956987 CGTGGAAGGCAAGCTTGG 59.043 61.111 27.10 9.80 0.00 3.61
5040 5465 3.880846 GGCAAGCTTGGCGATCCG 61.881 66.667 33.68 4.49 43.97 4.18
5041 5466 3.880846 GCAAGCTTGGCGATCCGG 61.881 66.667 27.10 0.00 34.14 5.14
5042 5467 2.125147 CAAGCTTGGCGATCCGGA 60.125 61.111 19.14 6.61 34.14 5.14
5043 5468 1.524621 CAAGCTTGGCGATCCGGAT 60.525 57.895 19.21 19.21 34.14 4.18
5044 5469 1.524621 AAGCTTGGCGATCCGGATG 60.525 57.895 24.82 15.19 34.14 3.51
5045 5470 2.203070 GCTTGGCGATCCGGATGT 60.203 61.111 24.82 0.00 34.14 3.06
5046 5471 1.069090 GCTTGGCGATCCGGATGTA 59.931 57.895 24.82 1.72 34.14 2.29
5047 5472 0.946221 GCTTGGCGATCCGGATGTAG 60.946 60.000 24.82 14.01 34.14 2.74
5048 5473 0.673985 CTTGGCGATCCGGATGTAGA 59.326 55.000 24.82 0.00 34.14 2.59
5049 5474 1.273606 CTTGGCGATCCGGATGTAGAT 59.726 52.381 24.82 0.00 34.14 1.98
5050 5475 0.888619 TGGCGATCCGGATGTAGATC 59.111 55.000 24.82 5.97 36.38 2.75
5051 5476 1.178276 GGCGATCCGGATGTAGATCT 58.822 55.000 24.82 0.00 37.37 2.75
5052 5477 1.133407 GGCGATCCGGATGTAGATCTC 59.867 57.143 24.82 4.26 37.37 2.75
5053 5478 1.133407 GCGATCCGGATGTAGATCTCC 59.867 57.143 24.82 2.44 37.37 3.71
5054 5479 2.717390 CGATCCGGATGTAGATCTCCT 58.283 52.381 24.82 0.00 37.37 3.69
5055 5480 2.680841 CGATCCGGATGTAGATCTCCTC 59.319 54.545 24.82 1.97 37.37 3.71
5056 5481 2.588464 TCCGGATGTAGATCTCCTCC 57.412 55.000 0.00 3.24 0.00 4.30
5057 5482 2.066592 TCCGGATGTAGATCTCCTCCT 58.933 52.381 0.00 0.00 0.00 3.69
5058 5483 2.040545 TCCGGATGTAGATCTCCTCCTC 59.959 54.545 0.00 0.00 0.00 3.71
5059 5484 2.041081 CCGGATGTAGATCTCCTCCTCT 59.959 54.545 0.00 0.00 0.00 3.69
5060 5485 3.264706 CCGGATGTAGATCTCCTCCTCTA 59.735 52.174 0.00 0.00 0.00 2.43
5061 5486 4.080015 CCGGATGTAGATCTCCTCCTCTAT 60.080 50.000 0.00 0.00 0.00 1.98
5062 5487 5.131308 CCGGATGTAGATCTCCTCCTCTATA 59.869 48.000 0.00 0.00 0.00 1.31
5063 5488 6.353169 CCGGATGTAGATCTCCTCCTCTATAA 60.353 46.154 0.00 0.00 0.00 0.98
5064 5489 7.113437 CGGATGTAGATCTCCTCCTCTATAAA 58.887 42.308 0.00 0.00 0.00 1.40
5065 5490 7.066525 CGGATGTAGATCTCCTCCTCTATAAAC 59.933 44.444 0.00 0.00 0.00 2.01
5066 5491 7.340999 GGATGTAGATCTCCTCCTCTATAAACC 59.659 44.444 0.00 0.00 0.00 3.27
5067 5492 6.239396 TGTAGATCTCCTCCTCTATAAACCG 58.761 44.000 0.00 0.00 0.00 4.44
5068 5493 5.586155 AGATCTCCTCCTCTATAAACCGA 57.414 43.478 0.00 0.00 0.00 4.69
5069 5494 5.318630 AGATCTCCTCCTCTATAAACCGAC 58.681 45.833 0.00 0.00 0.00 4.79
5070 5495 4.792513 TCTCCTCCTCTATAAACCGACT 57.207 45.455 0.00 0.00 0.00 4.18
5071 5496 4.716794 TCTCCTCCTCTATAAACCGACTC 58.283 47.826 0.00 0.00 0.00 3.36
5072 5497 4.412858 TCTCCTCCTCTATAAACCGACTCT 59.587 45.833 0.00 0.00 0.00 3.24
5073 5498 4.462133 TCCTCCTCTATAAACCGACTCTG 58.538 47.826 0.00 0.00 0.00 3.35
5074 5499 4.079901 TCCTCCTCTATAAACCGACTCTGT 60.080 45.833 0.00 0.00 0.00 3.41
5075 5500 4.036971 CCTCCTCTATAAACCGACTCTGTG 59.963 50.000 0.00 0.00 0.00 3.66
5076 5501 4.597004 TCCTCTATAAACCGACTCTGTGT 58.403 43.478 0.00 0.00 0.00 3.72
5077 5502 5.748402 TCCTCTATAAACCGACTCTGTGTA 58.252 41.667 0.00 0.00 0.00 2.90
5078 5503 6.182627 TCCTCTATAAACCGACTCTGTGTAA 58.817 40.000 0.00 0.00 0.00 2.41
5079 5504 6.094603 TCCTCTATAAACCGACTCTGTGTAAC 59.905 42.308 0.00 0.00 37.35 2.50
5080 5505 6.199937 TCTATAAACCGACTCTGTGTAACC 57.800 41.667 0.00 0.00 34.36 2.85
5081 5506 2.538512 AAACCGACTCTGTGTAACCC 57.461 50.000 0.00 0.00 34.36 4.11
5082 5507 1.713297 AACCGACTCTGTGTAACCCT 58.287 50.000 0.00 0.00 34.36 4.34
5083 5508 2.592102 ACCGACTCTGTGTAACCCTA 57.408 50.000 0.00 0.00 34.36 3.53
5084 5509 2.444421 ACCGACTCTGTGTAACCCTAG 58.556 52.381 0.00 0.00 34.36 3.02
5085 5510 1.134560 CCGACTCTGTGTAACCCTAGC 59.865 57.143 0.00 0.00 34.36 3.42
5086 5511 1.134560 CGACTCTGTGTAACCCTAGCC 59.865 57.143 0.00 0.00 34.36 3.93
5087 5512 1.481363 GACTCTGTGTAACCCTAGCCC 59.519 57.143 0.00 0.00 34.36 5.19
5088 5513 0.831307 CTCTGTGTAACCCTAGCCCC 59.169 60.000 0.00 0.00 34.36 5.80
5089 5514 0.619543 TCTGTGTAACCCTAGCCCCC 60.620 60.000 0.00 0.00 34.36 5.40
5090 5515 0.620700 CTGTGTAACCCTAGCCCCCT 60.621 60.000 0.00 0.00 34.36 4.79
5091 5516 0.619543 TGTGTAACCCTAGCCCCCTC 60.620 60.000 0.00 0.00 34.36 4.30
5092 5517 1.003835 TGTAACCCTAGCCCCCTCC 59.996 63.158 0.00 0.00 0.00 4.30
5093 5518 2.138831 GTAACCCTAGCCCCCTCCG 61.139 68.421 0.00 0.00 0.00 4.63
5094 5519 3.399911 TAACCCTAGCCCCCTCCGG 62.400 68.421 0.00 0.00 0.00 5.14
5097 5522 4.798682 CCTAGCCCCCTCCGGTGT 62.799 72.222 0.00 0.00 0.00 4.16
5098 5523 3.155167 CTAGCCCCCTCCGGTGTC 61.155 72.222 0.00 0.00 0.00 3.67
5099 5524 3.680196 TAGCCCCCTCCGGTGTCT 61.680 66.667 0.00 0.00 0.00 3.41
5100 5525 2.294170 CTAGCCCCCTCCGGTGTCTA 62.294 65.000 0.00 0.00 0.00 2.59
5101 5526 1.661990 TAGCCCCCTCCGGTGTCTAT 61.662 60.000 0.00 0.00 0.00 1.98
5102 5527 1.152398 GCCCCCTCCGGTGTCTATA 60.152 63.158 0.00 0.00 0.00 1.31
5103 5528 0.544595 GCCCCCTCCGGTGTCTATAT 60.545 60.000 0.00 0.00 0.00 0.86
5104 5529 1.272872 GCCCCCTCCGGTGTCTATATA 60.273 57.143 0.00 0.00 0.00 0.86
5105 5530 2.824303 GCCCCCTCCGGTGTCTATATAA 60.824 54.545 0.00 0.00 0.00 0.98
5106 5531 3.513517 CCCCCTCCGGTGTCTATATAAA 58.486 50.000 0.00 0.00 0.00 1.40
5107 5532 3.260128 CCCCCTCCGGTGTCTATATAAAC 59.740 52.174 0.00 0.00 0.00 2.01
5108 5533 3.260128 CCCCTCCGGTGTCTATATAAACC 59.740 52.174 0.00 0.68 0.00 3.27
5128 5553 2.674420 CGGAGGGTTTAGTCCATAGGA 58.326 52.381 0.00 0.00 32.55 2.94
5141 5566 3.832527 TCCATAGGACTCACGATCATCA 58.167 45.455 0.00 0.00 0.00 3.07
5142 5567 4.411013 TCCATAGGACTCACGATCATCAT 58.589 43.478 0.00 0.00 0.00 2.45
5143 5568 4.460731 TCCATAGGACTCACGATCATCATC 59.539 45.833 0.00 0.00 0.00 2.92
5144 5569 4.219288 CCATAGGACTCACGATCATCATCA 59.781 45.833 0.00 0.00 0.00 3.07
5145 5570 5.279156 CCATAGGACTCACGATCATCATCAA 60.279 44.000 0.00 0.00 0.00 2.57
5146 5571 4.052159 AGGACTCACGATCATCATCAAC 57.948 45.455 0.00 0.00 0.00 3.18
5147 5572 2.791560 GGACTCACGATCATCATCAACG 59.208 50.000 0.00 0.00 0.00 4.10
5148 5573 3.489229 GGACTCACGATCATCATCAACGA 60.489 47.826 0.00 0.00 0.00 3.85
5149 5574 4.294232 GACTCACGATCATCATCAACGAT 58.706 43.478 0.00 0.00 0.00 3.73
5150 5575 4.294232 ACTCACGATCATCATCAACGATC 58.706 43.478 0.00 0.00 33.66 3.69
5151 5576 4.202050 ACTCACGATCATCATCAACGATCA 60.202 41.667 0.00 0.00 36.20 2.92
5152 5577 4.874970 TCACGATCATCATCAACGATCAT 58.125 39.130 0.00 0.00 36.20 2.45
5153 5578 6.012658 TCACGATCATCATCAACGATCATA 57.987 37.500 0.00 0.00 36.20 2.15
5154 5579 5.858581 TCACGATCATCATCAACGATCATAC 59.141 40.000 0.00 0.00 36.20 2.39
5155 5580 5.061435 CACGATCATCATCAACGATCATACC 59.939 44.000 0.00 0.00 36.20 2.73
5156 5581 5.163513 CGATCATCATCAACGATCATACCA 58.836 41.667 0.00 0.00 36.20 3.25
5157 5582 5.809051 CGATCATCATCAACGATCATACCAT 59.191 40.000 0.00 0.00 36.20 3.55
5158 5583 6.974622 CGATCATCATCAACGATCATACCATA 59.025 38.462 0.00 0.00 36.20 2.74
5159 5584 7.167136 CGATCATCATCAACGATCATACCATAG 59.833 40.741 0.00 0.00 36.20 2.23
5160 5585 6.633856 TCATCATCAACGATCATACCATAGG 58.366 40.000 0.00 0.00 0.00 2.57
5161 5586 4.820897 TCATCAACGATCATACCATAGGC 58.179 43.478 0.00 0.00 0.00 3.93
5162 5587 4.528206 TCATCAACGATCATACCATAGGCT 59.472 41.667 0.00 0.00 0.00 4.58
5163 5588 5.714806 TCATCAACGATCATACCATAGGCTA 59.285 40.000 0.00 0.00 0.00 3.93
5164 5589 5.644977 TCAACGATCATACCATAGGCTAG 57.355 43.478 0.00 0.00 0.00 3.42
5165 5590 4.082190 TCAACGATCATACCATAGGCTAGC 60.082 45.833 6.04 6.04 0.00 3.42
5166 5591 3.702792 ACGATCATACCATAGGCTAGCT 58.297 45.455 15.72 3.22 0.00 3.32
5167 5592 4.090090 ACGATCATACCATAGGCTAGCTT 58.910 43.478 15.72 10.11 0.00 3.74
5168 5593 4.158764 ACGATCATACCATAGGCTAGCTTC 59.841 45.833 15.72 0.00 0.00 3.86
5169 5594 4.400884 CGATCATACCATAGGCTAGCTTCT 59.599 45.833 15.72 6.71 0.00 2.85
5170 5595 5.590663 CGATCATACCATAGGCTAGCTTCTA 59.409 44.000 15.72 8.91 0.00 2.10
5171 5596 6.238621 CGATCATACCATAGGCTAGCTTCTAG 60.239 46.154 15.72 3.93 0.00 2.43
5172 5597 5.265191 TCATACCATAGGCTAGCTTCTAGG 58.735 45.833 15.72 12.08 0.00 3.02
5173 5598 2.896039 ACCATAGGCTAGCTTCTAGGG 58.104 52.381 22.47 22.47 41.57 3.53
5174 5599 2.180308 ACCATAGGCTAGCTTCTAGGGT 59.820 50.000 23.48 23.48 43.27 4.34
5175 5600 3.243724 CCATAGGCTAGCTTCTAGGGTT 58.756 50.000 18.28 0.00 34.00 4.11
5176 5601 3.648545 CCATAGGCTAGCTTCTAGGGTTT 59.351 47.826 18.28 0.00 34.00 3.27
5177 5602 4.838986 CCATAGGCTAGCTTCTAGGGTTTA 59.161 45.833 18.28 0.00 34.00 2.01
5178 5603 5.046950 CCATAGGCTAGCTTCTAGGGTTTAG 60.047 48.000 18.28 0.00 34.00 1.85
5179 5604 2.701423 AGGCTAGCTTCTAGGGTTTAGC 59.299 50.000 15.72 0.00 34.32 3.09
5180 5605 2.224329 GGCTAGCTTCTAGGGTTTAGCC 60.224 54.545 15.72 15.56 44.26 3.93
5181 5606 2.701423 GCTAGCTTCTAGGGTTTAGCCT 59.299 50.000 7.70 5.72 37.43 4.58
5182 5607 3.243941 GCTAGCTTCTAGGGTTTAGCCTC 60.244 52.174 7.70 0.00 37.43 4.70
5183 5608 3.123392 AGCTTCTAGGGTTTAGCCTCT 57.877 47.619 3.32 0.00 37.43 3.69
5184 5609 3.035363 AGCTTCTAGGGTTTAGCCTCTC 58.965 50.000 3.32 0.00 37.43 3.20
5185 5610 3.035363 GCTTCTAGGGTTTAGCCTCTCT 58.965 50.000 3.32 0.00 37.43 3.10
5186 5611 3.181470 GCTTCTAGGGTTTAGCCTCTCTG 60.181 52.174 3.32 0.00 37.43 3.35
5187 5612 4.282496 CTTCTAGGGTTTAGCCTCTCTGA 58.718 47.826 3.32 0.00 37.43 3.27
5188 5613 4.544564 TCTAGGGTTTAGCCTCTCTGAT 57.455 45.455 3.32 0.00 37.43 2.90
5189 5614 4.475345 TCTAGGGTTTAGCCTCTCTGATC 58.525 47.826 3.32 0.00 37.43 2.92
5190 5615 3.413105 AGGGTTTAGCCTCTCTGATCT 57.587 47.619 0.00 0.00 37.43 2.75
5191 5616 3.304829 AGGGTTTAGCCTCTCTGATCTC 58.695 50.000 0.00 0.00 37.43 2.75
5192 5617 2.035321 GGGTTTAGCCTCTCTGATCTCG 59.965 54.545 0.00 0.00 37.43 4.04
5193 5618 2.691011 GGTTTAGCCTCTCTGATCTCGT 59.309 50.000 0.00 0.00 0.00 4.18
5194 5619 3.490078 GGTTTAGCCTCTCTGATCTCGTG 60.490 52.174 0.00 0.00 0.00 4.35
5195 5620 1.974265 TAGCCTCTCTGATCTCGTGG 58.026 55.000 0.00 0.00 0.00 4.94
5196 5621 0.033601 AGCCTCTCTGATCTCGTGGT 60.034 55.000 0.00 0.00 0.00 4.16
5197 5622 1.213182 AGCCTCTCTGATCTCGTGGTA 59.787 52.381 0.00 0.00 0.00 3.25
5198 5623 1.606668 GCCTCTCTGATCTCGTGGTAG 59.393 57.143 0.00 0.00 0.00 3.18
5199 5624 2.746803 GCCTCTCTGATCTCGTGGTAGA 60.747 54.545 0.00 0.00 0.00 2.59
5200 5625 3.750371 CCTCTCTGATCTCGTGGTAGAT 58.250 50.000 0.00 0.00 38.95 1.98
5209 5634 4.703645 TCTCGTGGTAGATCAACTCTTG 57.296 45.455 0.00 0.00 35.28 3.02
5210 5635 4.079970 TCTCGTGGTAGATCAACTCTTGT 58.920 43.478 0.00 0.00 35.28 3.16
5211 5636 5.250982 TCTCGTGGTAGATCAACTCTTGTA 58.749 41.667 0.00 0.00 35.28 2.41
5212 5637 5.708697 TCTCGTGGTAGATCAACTCTTGTAA 59.291 40.000 0.00 0.00 35.28 2.41
5213 5638 6.377429 TCTCGTGGTAGATCAACTCTTGTAAT 59.623 38.462 0.00 0.00 35.28 1.89
5214 5639 7.555195 TCTCGTGGTAGATCAACTCTTGTAATA 59.445 37.037 0.00 0.00 35.28 0.98
5215 5640 7.478322 TCGTGGTAGATCAACTCTTGTAATAC 58.522 38.462 0.00 0.00 35.28 1.89
5216 5641 7.338703 TCGTGGTAGATCAACTCTTGTAATACT 59.661 37.037 0.00 0.00 35.28 2.12
5217 5642 7.644551 CGTGGTAGATCAACTCTTGTAATACTC 59.355 40.741 0.00 0.00 35.28 2.59
5218 5643 8.467598 GTGGTAGATCAACTCTTGTAATACTCA 58.532 37.037 0.00 0.00 35.28 3.41
5219 5644 9.201989 TGGTAGATCAACTCTTGTAATACTCAT 57.798 33.333 0.00 0.00 35.28 2.90
5239 5664 8.325421 ACTCATATCATCAAGATCAATCAAGC 57.675 34.615 0.00 0.00 38.19 4.01
5240 5665 7.937394 ACTCATATCATCAAGATCAATCAAGCA 59.063 33.333 0.00 0.00 38.19 3.91
5241 5666 8.324163 TCATATCATCAAGATCAATCAAGCAG 57.676 34.615 0.00 0.00 38.19 4.24
5242 5667 7.390718 TCATATCATCAAGATCAATCAAGCAGG 59.609 37.037 0.00 0.00 38.19 4.85
5243 5668 5.106876 TCATCAAGATCAATCAAGCAGGA 57.893 39.130 0.00 0.00 0.00 3.86
5244 5669 5.503002 TCATCAAGATCAATCAAGCAGGAA 58.497 37.500 0.00 0.00 0.00 3.36
5245 5670 5.589050 TCATCAAGATCAATCAAGCAGGAAG 59.411 40.000 0.00 0.00 0.00 3.46
5246 5671 4.914983 TCAAGATCAATCAAGCAGGAAGT 58.085 39.130 0.00 0.00 0.00 3.01
5247 5672 6.053632 TCAAGATCAATCAAGCAGGAAGTA 57.946 37.500 0.00 0.00 0.00 2.24
5248 5673 6.111382 TCAAGATCAATCAAGCAGGAAGTAG 58.889 40.000 0.00 0.00 0.00 2.57
5249 5674 5.033589 AGATCAATCAAGCAGGAAGTAGG 57.966 43.478 0.00 0.00 0.00 3.18
5250 5675 3.634397 TCAATCAAGCAGGAAGTAGGG 57.366 47.619 0.00 0.00 0.00 3.53
5251 5676 2.912956 TCAATCAAGCAGGAAGTAGGGT 59.087 45.455 0.00 0.00 0.00 4.34
5252 5677 4.101114 TCAATCAAGCAGGAAGTAGGGTA 58.899 43.478 0.00 0.00 0.00 3.69
5253 5678 4.721776 TCAATCAAGCAGGAAGTAGGGTAT 59.278 41.667 0.00 0.00 0.00 2.73
5254 5679 5.191722 TCAATCAAGCAGGAAGTAGGGTATT 59.808 40.000 0.00 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.162408 GCTGATGGTTGTACTTTCCTGC 59.838 50.000 0.00 0.00 0.00 4.85
42 43 1.745115 GCCAGCGCTGATGGTTGTA 60.745 57.895 38.06 0.00 41.69 2.41
43 47 3.058160 GCCAGCGCTGATGGTTGT 61.058 61.111 38.06 0.00 41.69 3.32
45 49 4.704833 ACGCCAGCGCTGATGGTT 62.705 61.111 38.06 14.49 41.69 3.67
219 223 1.218047 CTCCGGCTTGGACGATGAA 59.782 57.895 0.00 0.00 43.74 2.57
222 226 1.218316 GAACTCCGGCTTGGACGAT 59.782 57.895 0.00 0.00 43.74 3.73
523 533 0.239347 CGCAGAGAAAGCCAAACAGG 59.761 55.000 0.00 0.00 41.84 4.00
524 534 0.947244 ACGCAGAGAAAGCCAAACAG 59.053 50.000 0.00 0.00 0.00 3.16
525 535 0.662619 CACGCAGAGAAAGCCAAACA 59.337 50.000 0.00 0.00 0.00 2.83
526 536 0.040067 CCACGCAGAGAAAGCCAAAC 60.040 55.000 0.00 0.00 0.00 2.93
527 537 0.465460 ACCACGCAGAGAAAGCCAAA 60.465 50.000 0.00 0.00 0.00 3.28
528 538 0.465460 AACCACGCAGAGAAAGCCAA 60.465 50.000 0.00 0.00 0.00 4.52
529 539 0.884704 GAACCACGCAGAGAAAGCCA 60.885 55.000 0.00 0.00 0.00 4.75
530 540 0.603975 AGAACCACGCAGAGAAAGCC 60.604 55.000 0.00 0.00 0.00 4.35
540 550 4.561213 GGCATTATTTTTACAGAACCACGC 59.439 41.667 0.00 0.00 0.00 5.34
614 628 7.382759 GCAAAATCGTTGGGTTTAATTCTTACA 59.617 33.333 0.00 0.00 0.00 2.41
618 632 5.925969 CAGCAAAATCGTTGGGTTTAATTCT 59.074 36.000 0.00 0.00 0.00 2.40
627 641 1.247567 ACTCCAGCAAAATCGTTGGG 58.752 50.000 0.00 0.00 37.81 4.12
639 653 8.193250 TGAAACGTTTTCTATAATACTCCAGC 57.807 34.615 15.89 0.00 0.00 4.85
665 679 8.770828 GCACACAGAAAAGTTACTTAACATCTA 58.229 33.333 0.00 0.00 38.62 1.98
666 680 7.255139 GGCACACAGAAAAGTTACTTAACATCT 60.255 37.037 0.00 0.00 38.62 2.90
667 681 6.856426 GGCACACAGAAAAGTTACTTAACATC 59.144 38.462 0.00 0.00 38.62 3.06
668 682 6.238925 GGGCACACAGAAAAGTTACTTAACAT 60.239 38.462 0.00 0.00 38.62 2.71
682 697 0.478072 ATGTTCAGGGGCACACAGAA 59.522 50.000 0.00 0.00 0.00 3.02
691 706 1.561542 AGCCACTTAGATGTTCAGGGG 59.438 52.381 0.00 0.00 33.76 4.79
692 707 2.026822 ACAGCCACTTAGATGTTCAGGG 60.027 50.000 0.00 0.00 0.00 4.45
693 708 3.005554 CACAGCCACTTAGATGTTCAGG 58.994 50.000 0.00 0.00 0.00 3.86
694 709 3.005554 CCACAGCCACTTAGATGTTCAG 58.994 50.000 0.00 0.00 0.00 3.02
701 716 3.244422 CCACTAAACCACAGCCACTTAGA 60.244 47.826 0.00 0.00 0.00 2.10
703 718 2.440253 ACCACTAAACCACAGCCACTTA 59.560 45.455 0.00 0.00 0.00 2.24
789 804 9.625747 AAGAAGGATTGGAAAAGCAAAAATAAA 57.374 25.926 0.00 0.00 0.00 1.40
790 805 9.625747 AAAGAAGGATTGGAAAAGCAAAAATAA 57.374 25.926 0.00 0.00 0.00 1.40
791 806 9.625747 AAAAGAAGGATTGGAAAAGCAAAAATA 57.374 25.926 0.00 0.00 0.00 1.40
792 807 8.523915 AAAAGAAGGATTGGAAAAGCAAAAAT 57.476 26.923 0.00 0.00 0.00 1.82
793 808 7.936496 AAAAGAAGGATTGGAAAAGCAAAAA 57.064 28.000 0.00 0.00 0.00 1.94
794 809 8.043710 TGTAAAAGAAGGATTGGAAAAGCAAAA 58.956 29.630 0.00 0.00 0.00 2.44
795 810 7.560368 TGTAAAAGAAGGATTGGAAAAGCAAA 58.440 30.769 0.00 0.00 0.00 3.68
799 814 9.341899 CGTTATGTAAAAGAAGGATTGGAAAAG 57.658 33.333 0.00 0.00 0.00 2.27
805 820 7.072177 TCAGCGTTATGTAAAAGAAGGATTG 57.928 36.000 0.00 0.00 0.00 2.67
809 824 5.119588 TCGTTCAGCGTTATGTAAAAGAAGG 59.880 40.000 0.00 0.00 42.13 3.46
810 825 6.148270 TCGTTCAGCGTTATGTAAAAGAAG 57.852 37.500 0.00 0.00 42.13 2.85
813 828 7.159818 CGTTAATCGTTCAGCGTTATGTAAAAG 59.840 37.037 0.00 0.00 42.13 2.27
817 832 4.500117 CCGTTAATCGTTCAGCGTTATGTA 59.500 41.667 0.00 0.00 42.13 2.29
822 837 0.441145 GCCGTTAATCGTTCAGCGTT 59.559 50.000 0.00 0.00 42.13 4.84
823 838 0.389426 AGCCGTTAATCGTTCAGCGT 60.389 50.000 0.00 0.00 42.13 5.07
824 839 0.297820 GAGCCGTTAATCGTTCAGCG 59.702 55.000 0.00 0.00 43.01 5.18
825 840 1.324736 CAGAGCCGTTAATCGTTCAGC 59.675 52.381 0.00 0.00 37.94 4.26
826 841 2.876091 TCAGAGCCGTTAATCGTTCAG 58.124 47.619 0.00 0.00 37.94 3.02
827 842 3.520290 ATCAGAGCCGTTAATCGTTCA 57.480 42.857 0.00 0.00 37.94 3.18
828 843 4.085004 GCTAATCAGAGCCGTTAATCGTTC 60.085 45.833 0.00 0.00 36.38 3.95
853 868 0.676184 CAGCGCCTCCATAAGAGCTA 59.324 55.000 2.29 0.00 41.74 3.32
854 869 1.045350 TCAGCGCCTCCATAAGAGCT 61.045 55.000 2.29 0.00 41.74 4.09
855 870 0.878086 GTCAGCGCCTCCATAAGAGC 60.878 60.000 2.29 0.00 41.74 4.09
856 871 0.461548 TGTCAGCGCCTCCATAAGAG 59.538 55.000 2.29 0.00 42.83 2.85
857 872 0.461548 CTGTCAGCGCCTCCATAAGA 59.538 55.000 2.29 0.00 0.00 2.10
869 884 3.618780 CTGGGGTCTGGCTGTCAGC 62.619 68.421 16.93 16.93 43.06 4.26
887 902 4.364409 GCCGACGTGCAAACGGTC 62.364 66.667 22.04 11.98 46.95 4.79
909 924 1.004891 GGGAGAAGAGGGGATGGGT 59.995 63.158 0.00 0.00 0.00 4.51
910 925 1.772156 GGGGAGAAGAGGGGATGGG 60.772 68.421 0.00 0.00 0.00 4.00
926 941 2.510906 CTATGGCGGAAGTGGGGG 59.489 66.667 0.00 0.00 0.00 5.40
983 1008 1.533625 CATTCCCGCAGAAACTCCAA 58.466 50.000 0.00 0.00 38.21 3.53
997 1022 1.598130 CTTCGCCGGGATCCATTCC 60.598 63.158 15.23 0.00 44.62 3.01
1089 1115 2.351276 GGGTGGCACTGGTTCGAT 59.649 61.111 18.45 0.00 0.00 3.59
1334 1360 2.415893 GCACCAACGCTGAGCAAATTAT 60.416 45.455 4.88 0.00 0.00 1.28
1344 1370 2.424705 AAGCAATGGCACCAACGCTG 62.425 55.000 14.77 2.91 44.61 5.18
1345 1371 1.747325 AAAGCAATGGCACCAACGCT 61.747 50.000 9.70 9.70 44.61 5.07
1348 1374 0.667184 CGGAAAGCAATGGCACCAAC 60.667 55.000 0.00 0.00 44.61 3.77
1349 1375 1.112315 ACGGAAAGCAATGGCACCAA 61.112 50.000 0.00 0.00 44.61 3.67
1350 1376 1.523154 GACGGAAAGCAATGGCACCA 61.523 55.000 0.00 0.00 44.61 4.17
1351 1377 1.212751 GACGGAAAGCAATGGCACC 59.787 57.895 0.00 0.00 44.61 5.01
1352 1378 0.169009 GAGACGGAAAGCAATGGCAC 59.831 55.000 0.00 0.00 44.61 5.01
1372 1398 7.897575 GTCTAGAGACATCAAATTCACAACT 57.102 36.000 4.77 0.00 44.18 3.16
1467 1529 7.446013 ACGGTTTCAAAGTAGTGATCCATTAAA 59.554 33.333 0.00 0.00 0.00 1.52
1471 1533 4.906618 ACGGTTTCAAAGTAGTGATCCAT 58.093 39.130 0.00 0.00 0.00 3.41
1491 1554 4.106197 GCTACCATGAGACTGAAACTACG 58.894 47.826 0.00 0.00 0.00 3.51
1576 1685 3.803368 GCCAAGTAAAAATTGCACTGCCT 60.803 43.478 0.00 0.00 0.00 4.75
1623 1732 4.976116 GTCACAATTGCTGTAGTTTTGGTC 59.024 41.667 5.05 0.00 36.10 4.02
1633 1742 3.504906 CAGAATCCTGTCACAATTGCTGT 59.495 43.478 5.05 0.00 35.61 4.40
1672 1781 5.891551 GCCCTTTCCAATTGTATCCTAGAAA 59.108 40.000 4.43 4.45 0.00 2.52
1759 1868 2.470983 TGCATCGGTCAATGAGAACA 57.529 45.000 0.00 0.00 31.63 3.18
1825 1934 0.378257 CATGCACATCCGCTTGTACC 59.622 55.000 0.00 0.00 33.58 3.34
1867 1976 1.537202 GAGCGTGAGATGCAAACCTTT 59.463 47.619 0.00 0.00 31.07 3.11
1888 1997 1.664321 CGTGGCTAGTCCGGCTAACT 61.664 60.000 0.00 0.00 37.80 2.24
1955 2064 1.754226 GGGTGCCTGTTTGTTCTTCAA 59.246 47.619 0.00 0.00 0.00 2.69
2307 2416 6.546403 AGAAACCCTTTCCTTACTTTGTTCTC 59.454 38.462 0.00 0.00 40.54 2.87
2380 2489 7.810169 CTTTCTCAAGATCGAACTGGAAGTCG 61.810 46.154 1.03 0.00 38.22 4.18
2676 2785 8.944029 CCTGAAAGTATATCTGCATTTGATAGG 58.056 37.037 0.00 0.00 31.03 2.57
2727 3113 6.599638 ACAAGGATAAAGCAGGATTCAAGTAC 59.400 38.462 0.00 0.00 0.00 2.73
2813 3203 1.916506 TCTCGAGGGCCATGATAGAG 58.083 55.000 13.56 3.70 0.00 2.43
2814 3204 2.612285 ATCTCGAGGGCCATGATAGA 57.388 50.000 13.56 0.00 0.00 1.98
2815 3205 6.493115 AGATATTATCTCGAGGGCCATGATAG 59.507 42.308 13.56 0.00 33.42 2.08
3129 3519 6.652245 CAATGGATGCAAAGTTCTCAAAAAC 58.348 36.000 0.00 0.00 0.00 2.43
3155 3545 1.381327 CTTCCCTGGGTAGCTCCGA 60.381 63.158 13.56 0.00 37.00 4.55
3253 3643 4.551702 TTGGTCCTTTCAGAATCATCGA 57.448 40.909 0.00 0.00 0.00 3.59
3307 3697 1.069703 CGCTCATGGTGTTGACTTGTG 60.070 52.381 0.00 0.00 0.00 3.33
3308 3698 1.229428 CGCTCATGGTGTTGACTTGT 58.771 50.000 0.00 0.00 0.00 3.16
3385 3775 3.117888 TGTCTTCCTCTCTTGCTTGGTTT 60.118 43.478 0.00 0.00 0.00 3.27
3423 3813 1.318576 CCAAGTCTTGTTGGTGACCC 58.681 55.000 11.61 0.00 41.96 4.46
3457 3847 6.719148 TGCATGGCAACCTCATAAAGGGAT 62.719 45.833 0.00 0.00 41.08 3.85
3589 3979 4.357325 AGAAGAGCACTAGGAATGAAGGA 58.643 43.478 0.00 0.00 0.00 3.36
3841 4231 9.588096 AAGTTTAGAGACCAGTTGGAAATAAAT 57.412 29.630 4.92 0.00 38.94 1.40
3848 4238 5.104693 TCACAAAGTTTAGAGACCAGTTGGA 60.105 40.000 4.92 0.00 38.94 3.53
4035 4425 1.271102 TCAACGTCGTCCATGACATCA 59.729 47.619 0.00 0.00 38.84 3.07
4050 4440 1.012086 CAGATCCATGCTGGTCAACG 58.988 55.000 0.00 0.00 39.03 4.10
4068 4458 2.101415 CTCATCAGGGTTGATAGTCGCA 59.899 50.000 0.00 0.00 42.12 5.10
4140 4530 5.129320 GTGGGATTTGAGCTTGGGAATATTT 59.871 40.000 0.00 0.00 0.00 1.40
4149 4539 1.402968 CCGATGTGGGATTTGAGCTTG 59.597 52.381 0.00 0.00 0.00 4.01
4239 4629 2.103042 GCTCTAACTGCAGCCCGTG 61.103 63.158 15.27 2.82 0.00 4.94
4297 4687 4.379499 CCCATCCTTCTAAAAGCACGAAAC 60.379 45.833 0.00 0.00 0.00 2.78
4324 4714 5.235616 TCGCCATACAAAATAAACCTCGATC 59.764 40.000 0.00 0.00 0.00 3.69
4347 4737 5.511729 GGAATAAGTTTGCGCAAGTAACATC 59.488 40.000 23.68 17.38 43.20 3.06
4372 4762 1.336125 ACAAAAAGCTCAGCTGACTGC 59.664 47.619 13.74 16.16 44.10 4.40
4407 4797 4.266029 GCAAACCATATCGAGTGCAAAATG 59.734 41.667 0.00 0.00 32.29 2.32
4412 4802 2.009051 CAGCAAACCATATCGAGTGCA 58.991 47.619 0.00 0.00 34.44 4.57
4432 4822 4.946478 AGGTCTGAAGACATGGCTATAC 57.054 45.455 0.00 0.00 46.47 1.47
4472 4863 3.565902 GCAGGCTATCCCTAACAATGTTC 59.434 47.826 0.22 0.00 44.09 3.18
4492 4883 3.916359 TCCATATTACTTTCCCACGCA 57.084 42.857 0.00 0.00 0.00 5.24
4496 4887 8.723365 ACTATGTCATTCCATATTACTTTCCCA 58.277 33.333 0.00 0.00 0.00 4.37
4504 4895 4.935205 GCGCCACTATGTCATTCCATATTA 59.065 41.667 0.00 0.00 0.00 0.98
4530 4921 2.235155 TCTATTTGTGTAAGCGGCTCCA 59.765 45.455 1.45 0.00 0.00 3.86
4594 4987 6.403333 GGTTTCACCTTGTTTTCTTTTGAC 57.597 37.500 0.00 0.00 34.73 3.18
4632 5036 7.069578 ACCTACATGAACATATCTTCCTACGTT 59.930 37.037 0.00 0.00 0.00 3.99
4633 5037 6.550108 ACCTACATGAACATATCTTCCTACGT 59.450 38.462 0.00 0.00 0.00 3.57
4634 5038 6.982852 ACCTACATGAACATATCTTCCTACG 58.017 40.000 0.00 0.00 0.00 3.51
4635 5039 8.421784 TGAACCTACATGAACATATCTTCCTAC 58.578 37.037 0.00 0.00 0.00 3.18
4636 5040 8.547481 TGAACCTACATGAACATATCTTCCTA 57.453 34.615 0.00 0.00 0.00 2.94
4637 5041 7.126421 ACTGAACCTACATGAACATATCTTCCT 59.874 37.037 0.00 0.00 0.00 3.36
4638 5042 7.275920 ACTGAACCTACATGAACATATCTTCC 58.724 38.462 0.00 0.00 0.00 3.46
4639 5043 8.723942 AACTGAACCTACATGAACATATCTTC 57.276 34.615 0.00 0.00 0.00 2.87
4640 5044 8.321353 TGAACTGAACCTACATGAACATATCTT 58.679 33.333 0.00 0.00 0.00 2.40
4641 5045 7.851228 TGAACTGAACCTACATGAACATATCT 58.149 34.615 0.00 0.00 0.00 1.98
4642 5046 8.492673 TTGAACTGAACCTACATGAACATATC 57.507 34.615 0.00 0.00 0.00 1.63
4662 5066 6.675728 GACTGAACTGTCTGGTTCTTTTGAAC 60.676 42.308 8.47 0.74 44.02 3.18
4691 5095 3.257873 CACATTTCATGCAAGTTGGGGTA 59.742 43.478 4.75 0.00 0.00 3.69
4692 5096 2.037511 CACATTTCATGCAAGTTGGGGT 59.962 45.455 4.75 0.00 0.00 4.95
4694 5098 3.663995 TCACATTTCATGCAAGTTGGG 57.336 42.857 4.75 0.00 0.00 4.12
4695 5099 4.811908 TCATCACATTTCATGCAAGTTGG 58.188 39.130 4.75 0.00 0.00 3.77
4696 5100 9.394477 CTATATCATCACATTTCATGCAAGTTG 57.606 33.333 0.00 0.00 0.00 3.16
4698 5102 8.687292 ACTATATCATCACATTTCATGCAAGT 57.313 30.769 0.00 0.00 0.00 3.16
4699 5103 9.961265 AAACTATATCATCACATTTCATGCAAG 57.039 29.630 0.00 0.00 0.00 4.01
4700 5104 9.955208 GAAACTATATCATCACATTTCATGCAA 57.045 29.630 0.00 0.00 0.00 4.08
4702 5106 9.955208 TTGAAACTATATCATCACATTTCATGC 57.045 29.630 0.00 0.00 35.26 4.06
4705 5109 8.902806 GGGTTGAAACTATATCATCACATTTCA 58.097 33.333 0.00 0.00 33.89 2.69
4706 5110 8.902806 TGGGTTGAAACTATATCATCACATTTC 58.097 33.333 0.00 0.00 27.81 2.17
4708 5112 8.686334 GTTGGGTTGAAACTATATCATCACATT 58.314 33.333 0.00 0.00 31.84 2.71
4709 5113 8.055181 AGTTGGGTTGAAACTATATCATCACAT 58.945 33.333 0.00 0.00 36.11 3.21
4710 5114 7.402054 AGTTGGGTTGAAACTATATCATCACA 58.598 34.615 0.00 0.00 36.11 3.58
4713 5117 7.148086 TGCAAGTTGGGTTGAAACTATATCATC 60.148 37.037 4.75 0.00 36.87 2.92
4714 5118 6.663093 TGCAAGTTGGGTTGAAACTATATCAT 59.337 34.615 4.75 0.00 36.87 2.45
4715 5119 6.007076 TGCAAGTTGGGTTGAAACTATATCA 58.993 36.000 4.75 0.00 36.87 2.15
4716 5120 6.509418 TGCAAGTTGGGTTGAAACTATATC 57.491 37.500 4.75 0.00 36.87 1.63
4718 5122 6.007076 TCATGCAAGTTGGGTTGAAACTATA 58.993 36.000 4.75 0.00 36.87 1.31
4719 5123 4.832266 TCATGCAAGTTGGGTTGAAACTAT 59.168 37.500 4.75 0.00 36.87 2.12
4721 5125 3.030291 TCATGCAAGTTGGGTTGAAACT 58.970 40.909 4.75 0.00 39.55 2.66
4722 5126 3.451141 TCATGCAAGTTGGGTTGAAAC 57.549 42.857 4.75 0.00 0.00 2.78
4723 5127 4.478206 TTTCATGCAAGTTGGGTTGAAA 57.522 36.364 4.75 4.22 32.41 2.69
4725 5129 3.387374 ACATTTCATGCAAGTTGGGTTGA 59.613 39.130 4.75 0.00 0.00 3.18
4726 5130 3.495377 CACATTTCATGCAAGTTGGGTTG 59.505 43.478 4.75 0.00 0.00 3.77
4727 5131 3.387374 TCACATTTCATGCAAGTTGGGTT 59.613 39.130 4.75 0.00 0.00 4.11
4781 5206 0.780637 TGCAAATTGGGGTAGGGTGA 59.219 50.000 0.00 0.00 0.00 4.02
4795 5220 5.179533 CCAAATCATCACATCCAATGCAAA 58.820 37.500 0.00 0.00 0.00 3.68
4801 5226 3.364549 GGGACCAAATCATCACATCCAA 58.635 45.455 0.00 0.00 0.00 3.53
4860 5285 3.730761 CTGGCTGCCACTTGTCGC 61.731 66.667 19.30 0.00 0.00 5.19
4861 5286 3.052082 CCTGGCTGCCACTTGTCG 61.052 66.667 19.30 6.84 0.00 4.35
4862 5287 2.113986 ACCTGGCTGCCACTTGTC 59.886 61.111 19.30 0.00 0.00 3.18
4863 5288 2.203394 CACCTGGCTGCCACTTGT 60.203 61.111 19.30 12.40 0.00 3.16
4864 5289 2.987547 CCACCTGGCTGCCACTTG 60.988 66.667 19.30 16.70 0.00 3.16
4875 5300 2.348998 GACCAGTCTGGCCACCTG 59.651 66.667 19.40 17.31 42.67 4.00
4876 5301 3.314331 CGACCAGTCTGGCCACCT 61.314 66.667 19.40 0.00 42.67 4.00
4877 5302 3.178540 AACGACCAGTCTGGCCACC 62.179 63.158 19.40 5.08 42.67 4.61
4878 5303 1.961277 CAACGACCAGTCTGGCCAC 60.961 63.158 19.40 9.67 42.67 5.01
4879 5304 2.099652 CTCAACGACCAGTCTGGCCA 62.100 60.000 19.40 4.71 42.67 5.36
4880 5305 1.374758 CTCAACGACCAGTCTGGCC 60.375 63.158 19.40 7.00 42.67 5.36
4881 5306 1.374758 CCTCAACGACCAGTCTGGC 60.375 63.158 19.40 10.65 42.67 4.85
4882 5307 1.185618 TCCCTCAACGACCAGTCTGG 61.186 60.000 17.88 17.88 45.02 3.86
4883 5308 0.244994 CTCCCTCAACGACCAGTCTG 59.755 60.000 0.00 0.00 0.00 3.51
4884 5309 0.178958 ACTCCCTCAACGACCAGTCT 60.179 55.000 0.00 0.00 0.00 3.24
4885 5310 0.244178 GACTCCCTCAACGACCAGTC 59.756 60.000 0.00 0.00 0.00 3.51
4886 5311 1.186267 GGACTCCCTCAACGACCAGT 61.186 60.000 0.00 0.00 0.00 4.00
4887 5312 0.900647 AGGACTCCCTCAACGACCAG 60.901 60.000 0.00 0.00 38.86 4.00
4888 5313 1.155390 AGGACTCCCTCAACGACCA 59.845 57.895 0.00 0.00 38.86 4.02
4889 5314 1.592223 CAGGACTCCCTCAACGACC 59.408 63.158 0.00 0.00 42.02 4.79
4890 5315 0.898789 TCCAGGACTCCCTCAACGAC 60.899 60.000 0.00 0.00 42.02 4.34
4891 5316 0.041238 ATCCAGGACTCCCTCAACGA 59.959 55.000 0.00 0.00 42.02 3.85
4892 5317 1.776662 TATCCAGGACTCCCTCAACG 58.223 55.000 0.00 0.00 42.02 4.10
4893 5318 3.828875 CTTATCCAGGACTCCCTCAAC 57.171 52.381 0.00 0.00 42.02 3.18
4904 5329 1.276622 CGGATACCCCCTTATCCAGG 58.723 60.000 9.33 0.00 45.68 4.45
4905 5330 1.203262 TCCGGATACCCCCTTATCCAG 60.203 57.143 0.00 0.00 45.68 3.86
4906 5331 0.868894 TCCGGATACCCCCTTATCCA 59.131 55.000 0.00 0.00 45.68 3.41
4907 5332 1.203275 AGTCCGGATACCCCCTTATCC 60.203 57.143 7.81 0.00 43.00 2.59
4908 5333 1.900486 CAGTCCGGATACCCCCTTATC 59.100 57.143 7.81 0.00 0.00 1.75
4909 5334 2.025636 CAGTCCGGATACCCCCTTAT 57.974 55.000 7.81 0.00 0.00 1.73
4910 5335 0.761702 GCAGTCCGGATACCCCCTTA 60.762 60.000 7.81 0.00 0.00 2.69
4911 5336 2.070650 GCAGTCCGGATACCCCCTT 61.071 63.158 7.81 0.00 0.00 3.95
4912 5337 2.446036 GCAGTCCGGATACCCCCT 60.446 66.667 7.81 0.00 0.00 4.79
4913 5338 3.557290 GGCAGTCCGGATACCCCC 61.557 72.222 7.81 0.13 0.00 5.40
4923 5348 4.557205 CAAAGTATATAGTCCGGCAGTCC 58.443 47.826 0.00 0.00 0.00 3.85
4924 5349 4.557205 CCAAAGTATATAGTCCGGCAGTC 58.443 47.826 0.00 0.00 0.00 3.51
4925 5350 3.244112 GCCAAAGTATATAGTCCGGCAGT 60.244 47.826 18.76 0.00 38.20 4.40
4926 5351 3.326747 GCCAAAGTATATAGTCCGGCAG 58.673 50.000 18.76 0.00 38.20 4.85
4927 5352 2.038033 GGCCAAAGTATATAGTCCGGCA 59.962 50.000 22.48 0.00 40.11 5.69
4928 5353 2.696506 GGCCAAAGTATATAGTCCGGC 58.303 52.381 16.68 16.68 37.57 6.13
4929 5354 2.955614 CGGCCAAAGTATATAGTCCGG 58.044 52.381 2.24 0.00 32.75 5.14
4930 5355 2.559668 TCCGGCCAAAGTATATAGTCCG 59.440 50.000 2.24 7.97 35.80 4.79
4931 5356 3.577415 AGTCCGGCCAAAGTATATAGTCC 59.423 47.826 2.24 0.00 0.00 3.85
4932 5357 4.038883 ACAGTCCGGCCAAAGTATATAGTC 59.961 45.833 2.24 0.00 0.00 2.59
4933 5358 3.965347 ACAGTCCGGCCAAAGTATATAGT 59.035 43.478 2.24 0.00 0.00 2.12
4934 5359 4.602340 ACAGTCCGGCCAAAGTATATAG 57.398 45.455 2.24 0.00 0.00 1.31
4935 5360 4.443739 CCAACAGTCCGGCCAAAGTATATA 60.444 45.833 2.24 0.00 0.00 0.86
4936 5361 3.541632 CAACAGTCCGGCCAAAGTATAT 58.458 45.455 2.24 0.00 0.00 0.86
4937 5362 2.355310 CCAACAGTCCGGCCAAAGTATA 60.355 50.000 2.24 0.00 0.00 1.47
4938 5363 1.613255 CCAACAGTCCGGCCAAAGTAT 60.613 52.381 2.24 0.00 0.00 2.12
4939 5364 0.250553 CCAACAGTCCGGCCAAAGTA 60.251 55.000 2.24 0.00 0.00 2.24
4940 5365 1.528309 CCAACAGTCCGGCCAAAGT 60.528 57.895 2.24 0.00 0.00 2.66
4941 5366 1.228124 TCCAACAGTCCGGCCAAAG 60.228 57.895 2.24 0.00 0.00 2.77
4942 5367 1.527380 GTCCAACAGTCCGGCCAAA 60.527 57.895 2.24 0.00 0.00 3.28
4943 5368 1.122632 TAGTCCAACAGTCCGGCCAA 61.123 55.000 2.24 0.00 0.00 4.52
4944 5369 0.907704 ATAGTCCAACAGTCCGGCCA 60.908 55.000 2.24 0.00 0.00 5.36
4945 5370 0.462047 CATAGTCCAACAGTCCGGCC 60.462 60.000 0.00 0.00 0.00 6.13
4946 5371 0.535335 TCATAGTCCAACAGTCCGGC 59.465 55.000 0.00 0.00 0.00 6.13
4947 5372 2.496070 TCTTCATAGTCCAACAGTCCGG 59.504 50.000 0.00 0.00 0.00 5.14
4948 5373 3.868757 TCTTCATAGTCCAACAGTCCG 57.131 47.619 0.00 0.00 0.00 4.79
4949 5374 6.222038 TGTATCTTCATAGTCCAACAGTCC 57.778 41.667 0.00 0.00 0.00 3.85
4950 5375 7.489757 GTCTTGTATCTTCATAGTCCAACAGTC 59.510 40.741 0.00 0.00 0.00 3.51
4951 5376 7.039011 TGTCTTGTATCTTCATAGTCCAACAGT 60.039 37.037 0.00 0.00 0.00 3.55
4952 5377 7.323420 TGTCTTGTATCTTCATAGTCCAACAG 58.677 38.462 0.00 0.00 0.00 3.16
4953 5378 7.178451 TCTGTCTTGTATCTTCATAGTCCAACA 59.822 37.037 0.00 0.00 0.00 3.33
4954 5379 7.548097 TCTGTCTTGTATCTTCATAGTCCAAC 58.452 38.462 0.00 0.00 0.00 3.77
4955 5380 7.718334 TCTGTCTTGTATCTTCATAGTCCAA 57.282 36.000 0.00 0.00 0.00 3.53
4956 5381 7.615757 TCTTCTGTCTTGTATCTTCATAGTCCA 59.384 37.037 0.00 0.00 0.00 4.02
4957 5382 7.918562 GTCTTCTGTCTTGTATCTTCATAGTCC 59.081 40.741 0.00 0.00 0.00 3.85
4958 5383 8.682710 AGTCTTCTGTCTTGTATCTTCATAGTC 58.317 37.037 0.00 0.00 0.00 2.59
4959 5384 8.588290 AGTCTTCTGTCTTGTATCTTCATAGT 57.412 34.615 0.00 0.00 0.00 2.12
4960 5385 9.515020 GAAGTCTTCTGTCTTGTATCTTCATAG 57.485 37.037 5.27 0.00 32.10 2.23
4961 5386 8.184848 CGAAGTCTTCTGTCTTGTATCTTCATA 58.815 37.037 10.81 0.00 32.10 2.15
4962 5387 7.032580 CGAAGTCTTCTGTCTTGTATCTTCAT 58.967 38.462 10.81 0.00 32.10 2.57
4963 5388 6.016192 ACGAAGTCTTCTGTCTTGTATCTTCA 60.016 38.462 10.81 0.00 29.74 3.02
4964 5389 6.383415 ACGAAGTCTTCTGTCTTGTATCTTC 58.617 40.000 10.81 0.00 29.74 2.87
4965 5390 6.334102 ACGAAGTCTTCTGTCTTGTATCTT 57.666 37.500 10.81 0.00 29.74 2.40
4966 5391 5.968528 ACGAAGTCTTCTGTCTTGTATCT 57.031 39.130 10.81 0.00 29.74 1.98
4995 5420 0.687757 CAAGGAGAGTCCCATCCGGA 60.688 60.000 6.61 6.61 40.73 5.14
4996 5421 1.690219 CCAAGGAGAGTCCCATCCGG 61.690 65.000 0.00 0.00 40.73 5.14
4997 5422 1.826024 CCAAGGAGAGTCCCATCCG 59.174 63.158 1.17 0.00 40.73 4.18
4998 5423 1.529309 GCCAAGGAGAGTCCCATCC 59.471 63.158 0.00 0.00 37.19 3.51
4999 5424 1.144936 CGCCAAGGAGAGTCCCATC 59.855 63.158 0.00 0.00 37.19 3.51
5000 5425 1.613630 ACGCCAAGGAGAGTCCCAT 60.614 57.895 0.00 0.00 37.19 4.00
5001 5426 2.203788 ACGCCAAGGAGAGTCCCA 60.204 61.111 0.00 0.00 37.19 4.37
5002 5427 2.266055 CACGCCAAGGAGAGTCCC 59.734 66.667 0.00 0.00 37.19 4.46
5003 5428 1.827399 TTCCACGCCAAGGAGAGTCC 61.827 60.000 0.00 0.00 36.33 3.85
5004 5429 0.390472 CTTCCACGCCAAGGAGAGTC 60.390 60.000 0.00 0.00 36.33 3.36
5005 5430 1.674057 CTTCCACGCCAAGGAGAGT 59.326 57.895 0.00 0.00 36.33 3.24
5006 5431 1.078848 CCTTCCACGCCAAGGAGAG 60.079 63.158 2.12 0.00 42.94 3.20
5007 5432 3.068881 CCTTCCACGCCAAGGAGA 58.931 61.111 2.12 0.00 42.94 3.71
5008 5433 2.747855 GCCTTCCACGCCAAGGAG 60.748 66.667 10.97 0.00 42.94 3.69
5009 5434 3.126703 TTGCCTTCCACGCCAAGGA 62.127 57.895 10.97 0.00 42.94 3.36
5010 5435 2.597217 TTGCCTTCCACGCCAAGG 60.597 61.111 3.73 3.73 43.13 3.61
5011 5436 2.956987 CTTGCCTTCCACGCCAAG 59.043 61.111 0.00 0.00 0.00 3.61
5012 5437 3.294493 GCTTGCCTTCCACGCCAA 61.294 61.111 0.00 0.00 32.93 4.52
5013 5438 3.790416 AAGCTTGCCTTCCACGCCA 62.790 57.895 0.00 0.00 39.36 5.69
5014 5439 2.985847 AAGCTTGCCTTCCACGCC 60.986 61.111 0.00 0.00 39.36 5.68
5015 5440 2.256461 CAAGCTTGCCTTCCACGC 59.744 61.111 14.65 0.00 38.87 5.34
5016 5441 2.956987 CCAAGCTTGCCTTCCACG 59.043 61.111 21.43 0.62 0.00 4.94
5017 5442 2.653115 GCCAAGCTTGCCTTCCAC 59.347 61.111 21.43 0.12 0.00 4.02
5018 5443 2.769652 ATCGCCAAGCTTGCCTTCCA 62.770 55.000 21.43 1.33 0.00 3.53
5019 5444 1.997928 GATCGCCAAGCTTGCCTTCC 61.998 60.000 21.43 5.84 0.00 3.46
5020 5445 1.431036 GATCGCCAAGCTTGCCTTC 59.569 57.895 21.43 10.46 0.00 3.46
5021 5446 2.048603 GGATCGCCAAGCTTGCCTT 61.049 57.895 21.43 5.08 0.00 4.35
5022 5447 2.439156 GGATCGCCAAGCTTGCCT 60.439 61.111 21.43 4.53 0.00 4.75
5023 5448 3.880846 CGGATCGCCAAGCTTGCC 61.881 66.667 21.43 14.67 0.00 4.52
5024 5449 3.880846 CCGGATCGCCAAGCTTGC 61.881 66.667 21.43 14.85 0.00 4.01
5025 5450 1.524621 ATCCGGATCGCCAAGCTTG 60.525 57.895 19.93 19.93 0.00 4.01
5026 5451 1.524621 CATCCGGATCGCCAAGCTT 60.525 57.895 15.88 0.00 0.00 3.74
5027 5452 1.399744 TACATCCGGATCGCCAAGCT 61.400 55.000 15.88 0.00 0.00 3.74
5028 5453 0.946221 CTACATCCGGATCGCCAAGC 60.946 60.000 15.88 0.00 0.00 4.01
5029 5454 0.673985 TCTACATCCGGATCGCCAAG 59.326 55.000 15.88 4.64 0.00 3.61
5030 5455 1.272490 GATCTACATCCGGATCGCCAA 59.728 52.381 15.88 0.00 30.80 4.52
5031 5456 0.888619 GATCTACATCCGGATCGCCA 59.111 55.000 15.88 0.00 30.80 5.69
5032 5457 1.133407 GAGATCTACATCCGGATCGCC 59.867 57.143 15.88 0.86 42.02 5.54
5033 5458 1.133407 GGAGATCTACATCCGGATCGC 59.867 57.143 15.88 4.69 42.02 4.58
5034 5459 2.680841 GAGGAGATCTACATCCGGATCG 59.319 54.545 15.88 12.88 42.02 3.69
5035 5460 3.020984 GGAGGAGATCTACATCCGGATC 58.979 54.545 15.88 2.62 40.73 3.36
5036 5461 2.652348 AGGAGGAGATCTACATCCGGAT 59.348 50.000 12.38 12.38 40.73 4.18
5037 5462 2.040545 GAGGAGGAGATCTACATCCGGA 59.959 54.545 6.61 6.61 40.73 5.14
5038 5463 2.041081 AGAGGAGGAGATCTACATCCGG 59.959 54.545 7.93 0.00 40.73 5.14
5039 5464 3.433306 AGAGGAGGAGATCTACATCCG 57.567 52.381 7.93 0.00 40.73 4.18
5040 5465 7.340999 GGTTTATAGAGGAGGAGATCTACATCC 59.659 44.444 7.93 11.07 31.09 3.51
5041 5466 7.066525 CGGTTTATAGAGGAGGAGATCTACATC 59.933 44.444 7.93 2.21 31.09 3.06
5042 5467 6.887545 CGGTTTATAGAGGAGGAGATCTACAT 59.112 42.308 7.93 0.00 31.09 2.29
5043 5468 6.044054 TCGGTTTATAGAGGAGGAGATCTACA 59.956 42.308 7.93 0.00 31.09 2.74
5044 5469 6.372381 GTCGGTTTATAGAGGAGGAGATCTAC 59.628 46.154 0.00 0.00 31.09 2.59
5045 5470 6.272792 AGTCGGTTTATAGAGGAGGAGATCTA 59.727 42.308 0.00 0.00 32.79 1.98
5046 5471 5.073965 AGTCGGTTTATAGAGGAGGAGATCT 59.926 44.000 0.00 0.00 0.00 2.75
5047 5472 5.318630 AGTCGGTTTATAGAGGAGGAGATC 58.681 45.833 0.00 0.00 0.00 2.75
5048 5473 5.073965 AGAGTCGGTTTATAGAGGAGGAGAT 59.926 44.000 0.00 0.00 0.00 2.75
5049 5474 4.412858 AGAGTCGGTTTATAGAGGAGGAGA 59.587 45.833 0.00 0.00 0.00 3.71
5050 5475 4.517453 CAGAGTCGGTTTATAGAGGAGGAG 59.483 50.000 0.00 0.00 0.00 3.69
5051 5476 4.079901 ACAGAGTCGGTTTATAGAGGAGGA 60.080 45.833 0.00 0.00 0.00 3.71
5052 5477 4.036971 CACAGAGTCGGTTTATAGAGGAGG 59.963 50.000 0.00 0.00 0.00 4.30
5053 5478 4.641094 ACACAGAGTCGGTTTATAGAGGAG 59.359 45.833 0.00 0.00 0.00 3.69
5054 5479 4.597004 ACACAGAGTCGGTTTATAGAGGA 58.403 43.478 0.00 0.00 0.00 3.71
5055 5480 4.985538 ACACAGAGTCGGTTTATAGAGG 57.014 45.455 0.00 0.00 0.00 3.69
5056 5481 6.264088 GGTTACACAGAGTCGGTTTATAGAG 58.736 44.000 0.00 0.00 0.00 2.43
5057 5482 5.126061 GGGTTACACAGAGTCGGTTTATAGA 59.874 44.000 0.00 0.00 0.00 1.98
5058 5483 5.126707 AGGGTTACACAGAGTCGGTTTATAG 59.873 44.000 0.00 0.00 0.00 1.31
5059 5484 5.018809 AGGGTTACACAGAGTCGGTTTATA 58.981 41.667 0.00 0.00 0.00 0.98
5060 5485 3.836562 AGGGTTACACAGAGTCGGTTTAT 59.163 43.478 0.00 0.00 0.00 1.40
5061 5486 3.233507 AGGGTTACACAGAGTCGGTTTA 58.766 45.455 0.00 0.00 0.00 2.01
5062 5487 2.044758 AGGGTTACACAGAGTCGGTTT 58.955 47.619 0.00 0.00 0.00 3.27
5063 5488 1.713297 AGGGTTACACAGAGTCGGTT 58.287 50.000 0.00 0.00 0.00 4.44
5064 5489 2.444421 CTAGGGTTACACAGAGTCGGT 58.556 52.381 0.00 0.00 0.00 4.69
5065 5490 1.134560 GCTAGGGTTACACAGAGTCGG 59.865 57.143 0.00 0.00 0.00 4.79
5066 5491 1.134560 GGCTAGGGTTACACAGAGTCG 59.865 57.143 0.00 0.00 0.00 4.18
5067 5492 1.481363 GGGCTAGGGTTACACAGAGTC 59.519 57.143 0.00 0.00 0.00 3.36
5068 5493 1.569653 GGGCTAGGGTTACACAGAGT 58.430 55.000 0.00 0.00 0.00 3.24
5069 5494 0.831307 GGGGCTAGGGTTACACAGAG 59.169 60.000 0.00 0.00 0.00 3.35
5070 5495 0.619543 GGGGGCTAGGGTTACACAGA 60.620 60.000 0.00 0.00 0.00 3.41
5071 5496 0.620700 AGGGGGCTAGGGTTACACAG 60.621 60.000 0.00 0.00 0.00 3.66
5072 5497 0.619543 GAGGGGGCTAGGGTTACACA 60.620 60.000 0.00 0.00 0.00 3.72
5073 5498 1.343431 GGAGGGGGCTAGGGTTACAC 61.343 65.000 0.00 0.00 0.00 2.90
5074 5499 1.003835 GGAGGGGGCTAGGGTTACA 59.996 63.158 0.00 0.00 0.00 2.41
5075 5500 2.138831 CGGAGGGGGCTAGGGTTAC 61.139 68.421 0.00 0.00 0.00 2.50
5076 5501 2.284493 CGGAGGGGGCTAGGGTTA 59.716 66.667 0.00 0.00 0.00 2.85
5093 5518 3.899980 ACCCTCCGGTTTATATAGACACC 59.100 47.826 0.00 2.59 40.58 4.16
5107 5532 1.692519 CCTATGGACTAAACCCTCCGG 59.307 57.143 0.00 0.00 0.00 5.14
5108 5533 2.674420 TCCTATGGACTAAACCCTCCG 58.326 52.381 0.00 0.00 0.00 4.63
5120 5545 3.832527 TGATGATCGTGAGTCCTATGGA 58.167 45.455 0.00 0.00 0.00 3.41
5121 5546 4.219288 TGATGATGATCGTGAGTCCTATGG 59.781 45.833 0.00 0.00 0.00 2.74
5122 5547 5.382618 TGATGATGATCGTGAGTCCTATG 57.617 43.478 0.00 0.00 0.00 2.23
5123 5548 5.563671 CGTTGATGATGATCGTGAGTCCTAT 60.564 44.000 0.00 0.00 0.00 2.57
5124 5549 4.261197 CGTTGATGATGATCGTGAGTCCTA 60.261 45.833 0.00 0.00 0.00 2.94
5125 5550 3.489908 CGTTGATGATGATCGTGAGTCCT 60.490 47.826 0.00 0.00 0.00 3.85
5126 5551 2.791560 CGTTGATGATGATCGTGAGTCC 59.208 50.000 0.00 0.00 0.00 3.85
5127 5552 3.695816 TCGTTGATGATGATCGTGAGTC 58.304 45.455 0.00 0.00 0.00 3.36
5128 5553 3.782889 TCGTTGATGATGATCGTGAGT 57.217 42.857 0.00 0.00 0.00 3.41
5129 5554 4.882508 GATCGTTGATGATGATCGTGAG 57.117 45.455 0.00 0.00 40.10 3.51
5134 5559 7.437565 CCTATGGTATGATCGTTGATGATGATC 59.562 40.741 0.00 2.13 46.59 2.92
5135 5560 7.270779 CCTATGGTATGATCGTTGATGATGAT 58.729 38.462 0.00 0.00 36.70 2.45
5136 5561 6.633856 CCTATGGTATGATCGTTGATGATGA 58.366 40.000 0.00 0.00 0.00 2.92
5137 5562 5.292834 GCCTATGGTATGATCGTTGATGATG 59.707 44.000 0.00 0.00 0.00 3.07
5138 5563 5.188555 AGCCTATGGTATGATCGTTGATGAT 59.811 40.000 0.00 0.00 0.00 2.45
5139 5564 4.528206 AGCCTATGGTATGATCGTTGATGA 59.472 41.667 0.00 0.00 0.00 2.92
5140 5565 4.825422 AGCCTATGGTATGATCGTTGATG 58.175 43.478 0.00 0.00 0.00 3.07
5141 5566 5.394663 GCTAGCCTATGGTATGATCGTTGAT 60.395 44.000 2.29 0.00 0.00 2.57
5142 5567 4.082190 GCTAGCCTATGGTATGATCGTTGA 60.082 45.833 2.29 0.00 0.00 3.18
5143 5568 4.081972 AGCTAGCCTATGGTATGATCGTTG 60.082 45.833 12.13 0.00 0.00 4.10
5144 5569 4.090090 AGCTAGCCTATGGTATGATCGTT 58.910 43.478 12.13 0.00 0.00 3.85
5145 5570 3.702792 AGCTAGCCTATGGTATGATCGT 58.297 45.455 12.13 0.00 0.00 3.73
5146 5571 4.400884 AGAAGCTAGCCTATGGTATGATCG 59.599 45.833 12.13 0.00 0.00 3.69
5147 5572 5.930837 AGAAGCTAGCCTATGGTATGATC 57.069 43.478 12.13 0.00 0.00 2.92
5148 5573 5.896678 CCTAGAAGCTAGCCTATGGTATGAT 59.103 44.000 12.13 0.00 0.00 2.45
5149 5574 5.265191 CCTAGAAGCTAGCCTATGGTATGA 58.735 45.833 12.13 0.00 0.00 2.15
5150 5575 4.404073 CCCTAGAAGCTAGCCTATGGTATG 59.596 50.000 12.13 0.00 0.00 2.39
5151 5576 4.046103 ACCCTAGAAGCTAGCCTATGGTAT 59.954 45.833 19.36 4.05 33.87 2.73
5152 5577 3.401683 ACCCTAGAAGCTAGCCTATGGTA 59.598 47.826 19.36 2.73 33.87 3.25
5153 5578 2.180308 ACCCTAGAAGCTAGCCTATGGT 59.820 50.000 12.13 15.16 31.76 3.55
5154 5579 2.896039 ACCCTAGAAGCTAGCCTATGG 58.104 52.381 12.13 14.55 0.00 2.74
5155 5580 4.965200 AAACCCTAGAAGCTAGCCTATG 57.035 45.455 12.13 3.90 0.00 2.23
5156 5581 4.528987 GCTAAACCCTAGAAGCTAGCCTAT 59.471 45.833 12.13 0.00 32.18 2.57
5157 5582 3.896272 GCTAAACCCTAGAAGCTAGCCTA 59.104 47.826 12.13 5.82 32.18 3.93
5158 5583 2.701423 GCTAAACCCTAGAAGCTAGCCT 59.299 50.000 12.13 4.79 32.18 4.58
5159 5584 2.224329 GGCTAAACCCTAGAAGCTAGCC 60.224 54.545 12.13 13.65 43.27 3.93
5160 5585 2.701423 AGGCTAAACCCTAGAAGCTAGC 59.299 50.000 6.62 6.62 40.58 3.42
5161 5586 4.219919 AGAGGCTAAACCCTAGAAGCTAG 58.780 47.826 0.00 0.00 40.58 3.42
5162 5587 4.079096 AGAGAGGCTAAACCCTAGAAGCTA 60.079 45.833 0.00 0.00 40.58 3.32
5163 5588 3.035363 GAGAGGCTAAACCCTAGAAGCT 58.965 50.000 0.00 0.00 40.58 3.74
5164 5589 3.035363 AGAGAGGCTAAACCCTAGAAGC 58.965 50.000 0.00 0.00 40.58 3.86
5165 5590 4.282496 TCAGAGAGGCTAAACCCTAGAAG 58.718 47.826 0.00 0.00 40.58 2.85
5166 5591 4.332683 TCAGAGAGGCTAAACCCTAGAA 57.667 45.455 0.00 0.00 40.58 2.10
5167 5592 4.169068 AGATCAGAGAGGCTAAACCCTAGA 59.831 45.833 0.00 0.00 40.58 2.43
5168 5593 4.479158 AGATCAGAGAGGCTAAACCCTAG 58.521 47.826 0.00 0.00 40.58 3.02
5169 5594 4.475345 GAGATCAGAGAGGCTAAACCCTA 58.525 47.826 0.00 0.00 40.58 3.53
5170 5595 3.304829 GAGATCAGAGAGGCTAAACCCT 58.695 50.000 0.00 0.00 40.58 4.34
5171 5596 2.035321 CGAGATCAGAGAGGCTAAACCC 59.965 54.545 0.00 0.00 40.58 4.11
5172 5597 2.691011 ACGAGATCAGAGAGGCTAAACC 59.309 50.000 0.00 0.00 39.61 3.27
5173 5598 3.490078 CCACGAGATCAGAGAGGCTAAAC 60.490 52.174 0.00 0.00 0.00 2.01
5174 5599 2.690497 CCACGAGATCAGAGAGGCTAAA 59.310 50.000 0.00 0.00 0.00 1.85
5175 5600 2.302260 CCACGAGATCAGAGAGGCTAA 58.698 52.381 0.00 0.00 0.00 3.09
5176 5601 1.213182 ACCACGAGATCAGAGAGGCTA 59.787 52.381 0.00 0.00 0.00 3.93
5177 5602 0.033601 ACCACGAGATCAGAGAGGCT 60.034 55.000 0.00 0.00 0.00 4.58
5178 5603 1.606668 CTACCACGAGATCAGAGAGGC 59.393 57.143 0.00 0.00 0.00 4.70
5179 5604 3.201353 TCTACCACGAGATCAGAGAGG 57.799 52.381 0.00 0.00 0.00 3.69
5187 5612 4.707448 ACAAGAGTTGATCTACCACGAGAT 59.293 41.667 3.54 0.00 37.23 2.75
5188 5613 4.079970 ACAAGAGTTGATCTACCACGAGA 58.920 43.478 3.54 0.00 37.23 4.04
5189 5614 4.442375 ACAAGAGTTGATCTACCACGAG 57.558 45.455 3.54 1.07 37.23 4.18
5190 5615 5.970317 TTACAAGAGTTGATCTACCACGA 57.030 39.130 3.54 0.00 37.23 4.35
5191 5616 7.481642 AGTATTACAAGAGTTGATCTACCACG 58.518 38.462 3.54 0.00 37.23 4.94
5192 5617 8.467598 TGAGTATTACAAGAGTTGATCTACCAC 58.532 37.037 3.54 0.00 37.23 4.16
5193 5618 8.589701 TGAGTATTACAAGAGTTGATCTACCA 57.410 34.615 3.54 0.00 37.23 3.25
5213 5638 9.433153 GCTTGATTGATCTTGATGATATGAGTA 57.567 33.333 0.00 0.00 35.14 2.59
5214 5639 7.937394 TGCTTGATTGATCTTGATGATATGAGT 59.063 33.333 0.00 0.00 35.14 3.41
5215 5640 8.324163 TGCTTGATTGATCTTGATGATATGAG 57.676 34.615 0.00 0.00 35.14 2.90
5216 5641 7.390718 CCTGCTTGATTGATCTTGATGATATGA 59.609 37.037 0.00 0.00 35.14 2.15
5217 5642 7.390718 TCCTGCTTGATTGATCTTGATGATATG 59.609 37.037 0.00 0.00 35.14 1.78
5218 5643 7.459234 TCCTGCTTGATTGATCTTGATGATAT 58.541 34.615 0.00 0.00 35.14 1.63
5219 5644 6.834107 TCCTGCTTGATTGATCTTGATGATA 58.166 36.000 0.00 0.00 35.14 2.15
5220 5645 5.691896 TCCTGCTTGATTGATCTTGATGAT 58.308 37.500 0.00 0.00 38.27 2.45
5221 5646 5.106876 TCCTGCTTGATTGATCTTGATGA 57.893 39.130 0.00 0.00 0.00 2.92
5222 5647 5.357314 ACTTCCTGCTTGATTGATCTTGATG 59.643 40.000 0.00 0.00 0.00 3.07
5223 5648 5.507637 ACTTCCTGCTTGATTGATCTTGAT 58.492 37.500 0.00 0.00 0.00 2.57
5224 5649 4.914983 ACTTCCTGCTTGATTGATCTTGA 58.085 39.130 0.00 0.00 0.00 3.02
5225 5650 5.296283 CCTACTTCCTGCTTGATTGATCTTG 59.704 44.000 0.00 0.00 0.00 3.02
5226 5651 5.435291 CCTACTTCCTGCTTGATTGATCTT 58.565 41.667 0.00 0.00 0.00 2.40
5227 5652 4.141528 CCCTACTTCCTGCTTGATTGATCT 60.142 45.833 0.00 0.00 0.00 2.75
5228 5653 4.133078 CCCTACTTCCTGCTTGATTGATC 58.867 47.826 0.00 0.00 0.00 2.92
5229 5654 3.525199 ACCCTACTTCCTGCTTGATTGAT 59.475 43.478 0.00 0.00 0.00 2.57
5230 5655 2.912956 ACCCTACTTCCTGCTTGATTGA 59.087 45.455 0.00 0.00 0.00 2.57
5231 5656 3.356529 ACCCTACTTCCTGCTTGATTG 57.643 47.619 0.00 0.00 0.00 2.67
5232 5657 5.717119 AATACCCTACTTCCTGCTTGATT 57.283 39.130 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.