Multiple sequence alignment - TraesCS4B01G189900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G189900 chr4B 100.000 5507 0 0 1 5507 412767381 412772887 0.000000e+00 10170.0
1 TraesCS4B01G189900 chr4D 92.646 2842 114 27 868 3661 334956603 334959397 0.000000e+00 4002.0
2 TraesCS4B01G189900 chr4D 93.111 958 39 15 3660 4600 334959429 334960376 0.000000e+00 1378.0
3 TraesCS4B01G189900 chr4D 100.000 29 0 0 4828 4856 289577946 289577918 3.000000e-03 54.7
4 TraesCS4B01G189900 chr4A 93.346 2119 71 15 1581 3661 138424176 138422090 0.000000e+00 3068.0
5 TraesCS4B01G189900 chr4A 91.675 949 58 12 3660 4600 138422058 138421123 0.000000e+00 1295.0
6 TraesCS4B01G189900 chr4A 97.175 531 15 0 4977 5507 132053892 132053362 0.000000e+00 898.0
7 TraesCS4B01G189900 chr4A 94.810 578 23 6 954 1530 138424954 138424383 0.000000e+00 894.0
8 TraesCS4B01G189900 chr4A 96.448 366 11 1 4615 4978 132054222 132053857 2.190000e-168 603.0
9 TraesCS4B01G189900 chr5B 96.341 574 19 1 248 821 445499369 445499940 0.000000e+00 942.0
10 TraesCS4B01G189900 chr5B 97.782 496 11 0 5012 5507 136414646 136415141 0.000000e+00 856.0
11 TraesCS4B01G189900 chr5B 87.600 250 31 0 1 250 522925745 522925994 1.940000e-74 291.0
12 TraesCS4B01G189900 chr2B 98.120 532 9 1 4976 5507 8558675 8559205 0.000000e+00 926.0
13 TraesCS4B01G189900 chr2B 96.296 378 11 2 4603 4978 8558334 8558710 7.840000e-173 617.0
14 TraesCS4B01G189900 chr2B 83.333 570 93 2 248 816 154192643 154192075 4.890000e-145 525.0
15 TraesCS4B01G189900 chr2B 92.000 250 15 1 1 250 222241611 222241855 4.080000e-91 346.0
16 TraesCS4B01G189900 chr2B 85.141 249 37 0 1 249 463349988 463350236 7.080000e-64 255.0
17 TraesCS4B01G189900 chr7B 97.368 532 13 1 4976 5507 64177718 64177188 0.000000e+00 904.0
18 TraesCS4B01G189900 chr7B 96.825 378 10 1 4603 4978 64178059 64177682 1.010000e-176 630.0
19 TraesCS4B01G189900 chr7B 84.848 528 78 2 248 774 180688621 180689147 1.050000e-146 531.0
20 TraesCS4B01G189900 chr7B 84.000 250 40 0 1 250 1049394 1049643 1.980000e-59 241.0
21 TraesCS4B01G189900 chr6B 97.180 532 15 0 4976 5507 478892566 478892035 0.000000e+00 900.0
22 TraesCS4B01G189900 chr6B 95.778 379 7 3 4603 4978 478892902 478892530 2.190000e-168 603.0
23 TraesCS4B01G189900 chr6B 94.444 378 15 3 4603 4978 372000625 372000998 1.330000e-160 577.0
24 TraesCS4B01G189900 chr6B 84.800 250 36 2 1 249 289513739 289513491 3.290000e-62 250.0
25 TraesCS4B01G189900 chr2D 95.489 532 20 2 4976 5507 53240688 53241215 0.000000e+00 846.0
26 TraesCS4B01G189900 chr2D 81.977 516 87 6 248 761 407953363 407953874 3.050000e-117 433.0
27 TraesCS4B01G189900 chr2D 94.937 237 12 0 4603 4839 53240375 53240611 6.740000e-99 372.0
28 TraesCS4B01G189900 chr2D 96.491 114 2 1 4867 4978 53240611 53240724 2.620000e-43 187.0
29 TraesCS4B01G189900 chr3D 89.850 532 54 0 4976 5507 7506475 7505944 0.000000e+00 684.0
30 TraesCS4B01G189900 chr3D 83.957 561 90 0 251 811 412112914 412113474 6.280000e-149 538.0
31 TraesCS4B01G189900 chr1A 89.163 526 55 2 4976 5501 299265205 299265728 0.000000e+00 654.0
32 TraesCS4B01G189900 chr1A 94.400 250 14 0 1 250 497356797 497356548 8.650000e-103 385.0
33 TraesCS4B01G189900 chr1D 88.973 526 58 0 4976 5501 104296620 104297145 0.000000e+00 651.0
34 TraesCS4B01G189900 chr1B 86.381 514 70 0 248 761 20725360 20725873 3.720000e-156 562.0
35 TraesCS4B01G189900 chr1B 83.730 252 40 1 3 253 296765778 296765527 2.560000e-58 237.0
36 TraesCS4B01G189900 chr2A 84.109 516 81 1 247 761 551712726 551712211 1.070000e-136 497.0
37 TraesCS4B01G189900 chr6D 83.268 514 86 0 248 761 312142855 312143368 1.800000e-129 473.0
38 TraesCS4B01G189900 chr6D 85.603 257 36 1 1 257 28056752 28056497 9.090000e-68 268.0
39 TraesCS4B01G189900 chr3B 96.400 250 9 0 1 250 125935096 125934847 3.970000e-111 412.0
40 TraesCS4B01G189900 chr5D 77.213 531 117 3 246 774 448600457 448600985 1.930000e-79 307.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G189900 chr4B 412767381 412772887 5506 False 10170.000000 10170 100.0000 1 5507 1 chr4B.!!$F1 5506
1 TraesCS4B01G189900 chr4D 334956603 334960376 3773 False 2690.000000 4002 92.8785 868 4600 2 chr4D.!!$F1 3732
2 TraesCS4B01G189900 chr4A 138421123 138424954 3831 True 1752.333333 3068 93.2770 954 4600 3 chr4A.!!$R2 3646
3 TraesCS4B01G189900 chr4A 132053362 132054222 860 True 750.500000 898 96.8115 4615 5507 2 chr4A.!!$R1 892
4 TraesCS4B01G189900 chr5B 445499369 445499940 571 False 942.000000 942 96.3410 248 821 1 chr5B.!!$F2 573
5 TraesCS4B01G189900 chr2B 8558334 8559205 871 False 771.500000 926 97.2080 4603 5507 2 chr2B.!!$F3 904
6 TraesCS4B01G189900 chr2B 154192075 154192643 568 True 525.000000 525 83.3330 248 816 1 chr2B.!!$R1 568
7 TraesCS4B01G189900 chr7B 64177188 64178059 871 True 767.000000 904 97.0965 4603 5507 2 chr7B.!!$R1 904
8 TraesCS4B01G189900 chr7B 180688621 180689147 526 False 531.000000 531 84.8480 248 774 1 chr7B.!!$F2 526
9 TraesCS4B01G189900 chr6B 478892035 478892902 867 True 751.500000 900 96.4790 4603 5507 2 chr6B.!!$R2 904
10 TraesCS4B01G189900 chr2D 53240375 53241215 840 False 468.333333 846 95.6390 4603 5507 3 chr2D.!!$F2 904
11 TraesCS4B01G189900 chr2D 407953363 407953874 511 False 433.000000 433 81.9770 248 761 1 chr2D.!!$F1 513
12 TraesCS4B01G189900 chr3D 7505944 7506475 531 True 684.000000 684 89.8500 4976 5507 1 chr3D.!!$R1 531
13 TraesCS4B01G189900 chr3D 412112914 412113474 560 False 538.000000 538 83.9570 251 811 1 chr3D.!!$F1 560
14 TraesCS4B01G189900 chr1A 299265205 299265728 523 False 654.000000 654 89.1630 4976 5501 1 chr1A.!!$F1 525
15 TraesCS4B01G189900 chr1D 104296620 104297145 525 False 651.000000 651 88.9730 4976 5501 1 chr1D.!!$F1 525
16 TraesCS4B01G189900 chr1B 20725360 20725873 513 False 562.000000 562 86.3810 248 761 1 chr1B.!!$F1 513
17 TraesCS4B01G189900 chr2A 551712211 551712726 515 True 497.000000 497 84.1090 247 761 1 chr2A.!!$R1 514
18 TraesCS4B01G189900 chr6D 312142855 312143368 513 False 473.000000 473 83.2680 248 761 1 chr6D.!!$F1 513
19 TraesCS4B01G189900 chr5D 448600457 448600985 528 False 307.000000 307 77.2130 246 774 1 chr5D.!!$F1 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
187 188 0.034186 TGCATTGGTCACCTCATCCC 60.034 55.000 0.00 0.00 0.00 3.85 F
325 326 0.046242 AAGGGATCATGGGGGAGTCA 59.954 55.000 0.00 0.00 0.00 3.41 F
854 855 0.108585 AGAAAGCTGAAACGAGCCCA 59.891 50.000 0.00 0.00 40.08 5.36 F
855 856 0.238553 GAAAGCTGAAACGAGCCCAC 59.761 55.000 0.00 0.00 40.08 4.61 F
860 861 0.736325 CTGAAACGAGCCCACGGTAG 60.736 60.000 0.00 0.00 37.61 3.18 F
1693 1861 0.950555 TCGTGTGTGCTGCCTCATTC 60.951 55.000 0.00 0.00 0.00 2.67 F
1696 1864 1.135489 GTGTGTGCTGCCTCATTCATG 60.135 52.381 0.00 0.00 0.00 3.07 F
1698 1866 1.135489 GTGTGCTGCCTCATTCATGTG 60.135 52.381 0.00 0.00 0.00 3.21 F
1700 1868 1.135489 GTGCTGCCTCATTCATGTGTG 60.135 52.381 0.00 0.00 0.00 3.82 F
1701 1869 1.171308 GCTGCCTCATTCATGTGTGT 58.829 50.000 0.00 0.00 0.00 3.72 F
2787 2988 1.339438 TGCAGCTTTGAGGATGGTCTC 60.339 52.381 0.00 0.00 0.00 3.36 F
4253 4509 0.099436 GAACATTGGCGCATGAGACC 59.901 55.000 10.83 1.29 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1663 1831 1.464023 GCACACACGATGCACATGTAC 60.464 52.381 0.00 0.00 42.88 2.90 R
1899 2079 2.510613 TGAACATCTTCGGTTTTCCCC 58.489 47.619 0.00 0.00 36.42 4.81 R
2550 2730 1.021968 GGCAATACCTAAAGGCACCG 58.978 55.000 0.00 0.00 39.32 4.94 R
2761 2962 1.250328 TCCTCAAAGCTGCATGTTGG 58.750 50.000 1.02 7.89 0.00 3.77 R
2862 3063 6.461110 AAGAACATGAGCAATCTATTTGGG 57.539 37.500 0.00 0.00 35.75 4.12 R
2974 3175 0.099968 CCACATCCTCATTTGCAGCG 59.900 55.000 0.00 0.00 0.00 5.18 R
3252 3464 2.362077 ACCAGGTTTCACACTTCATTGC 59.638 45.455 0.00 0.00 0.00 3.56 R
3401 3615 3.081061 GTTGTCTGACATATTGCCACCA 58.919 45.455 11.86 0.00 0.00 4.17 R
3559 3773 7.974675 ACAGTATACACAATGTTAGAATGCAC 58.025 34.615 5.50 0.00 0.00 4.57 R
3830 4078 6.332976 AGATTACTGGGATTCTTGGTGATT 57.667 37.500 0.00 0.00 0.00 2.57 R
4504 4774 0.036732 TCAGACAGTGAACCATGGGC 59.963 55.000 18.09 8.37 29.64 5.36 R
5345 5646 0.251341 GTGGATGTGCAAAGGAGGGT 60.251 55.000 0.00 0.00 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.385358 CTTTAACCTGTTTGCCACAACT 57.615 40.909 0.00 0.00 33.87 3.16
22 23 5.508200 CTTTAACCTGTTTGCCACAACTA 57.492 39.130 0.00 0.00 33.87 2.24
23 24 6.084326 CTTTAACCTGTTTGCCACAACTAT 57.916 37.500 0.00 0.00 33.87 2.12
24 25 5.446143 TTAACCTGTTTGCCACAACTATG 57.554 39.130 0.00 0.00 33.87 2.23
25 26 2.238521 ACCTGTTTGCCACAACTATGG 58.761 47.619 0.00 0.00 43.26 2.74
26 27 2.158534 ACCTGTTTGCCACAACTATGGA 60.159 45.455 0.00 0.00 43.02 3.41
27 28 2.228822 CCTGTTTGCCACAACTATGGAC 59.771 50.000 0.00 0.00 43.02 4.02
28 29 1.876799 TGTTTGCCACAACTATGGACG 59.123 47.619 0.00 0.00 43.02 4.79
29 30 0.878416 TTTGCCACAACTATGGACGC 59.122 50.000 0.00 0.00 43.02 5.19
30 31 0.250510 TTGCCACAACTATGGACGCA 60.251 50.000 0.00 0.00 43.02 5.24
31 32 0.250510 TGCCACAACTATGGACGCAA 60.251 50.000 0.00 0.00 43.02 4.85
32 33 1.094785 GCCACAACTATGGACGCAAT 58.905 50.000 0.00 0.00 43.02 3.56
33 34 1.472480 GCCACAACTATGGACGCAATT 59.528 47.619 0.00 0.00 43.02 2.32
34 35 2.094752 GCCACAACTATGGACGCAATTT 60.095 45.455 0.00 0.00 43.02 1.82
35 36 3.613910 GCCACAACTATGGACGCAATTTT 60.614 43.478 0.00 0.00 43.02 1.82
36 37 4.380023 GCCACAACTATGGACGCAATTTTA 60.380 41.667 0.00 0.00 43.02 1.52
37 38 5.678616 GCCACAACTATGGACGCAATTTTAT 60.679 40.000 0.00 0.00 43.02 1.40
38 39 6.459024 GCCACAACTATGGACGCAATTTTATA 60.459 38.462 0.00 0.00 43.02 0.98
39 40 7.132213 CCACAACTATGGACGCAATTTTATAG 58.868 38.462 0.00 0.00 43.02 1.31
40 41 7.011950 CCACAACTATGGACGCAATTTTATAGA 59.988 37.037 0.00 0.00 43.02 1.98
41 42 8.559536 CACAACTATGGACGCAATTTTATAGAT 58.440 33.333 0.00 0.00 0.00 1.98
42 43 8.774586 ACAACTATGGACGCAATTTTATAGATC 58.225 33.333 0.00 0.00 0.00 2.75
43 44 8.773645 CAACTATGGACGCAATTTTATAGATCA 58.226 33.333 0.00 0.00 0.00 2.92
44 45 8.311650 ACTATGGACGCAATTTTATAGATCAC 57.688 34.615 0.00 0.00 0.00 3.06
45 46 5.651172 TGGACGCAATTTTATAGATCACG 57.349 39.130 0.00 0.00 0.00 4.35
46 47 5.113383 TGGACGCAATTTTATAGATCACGT 58.887 37.500 0.00 0.00 0.00 4.49
47 48 5.583061 TGGACGCAATTTTATAGATCACGTT 59.417 36.000 0.00 0.00 0.00 3.99
48 49 6.757478 TGGACGCAATTTTATAGATCACGTTA 59.243 34.615 0.00 0.00 0.00 3.18
49 50 7.061634 GGACGCAATTTTATAGATCACGTTAC 58.938 38.462 0.00 0.00 0.00 2.50
50 51 7.254185 GGACGCAATTTTATAGATCACGTTACA 60.254 37.037 0.00 0.00 0.00 2.41
51 52 7.966111 ACGCAATTTTATAGATCACGTTACAA 58.034 30.769 0.00 0.00 0.00 2.41
52 53 8.444715 ACGCAATTTTATAGATCACGTTACAAA 58.555 29.630 0.00 0.00 0.00 2.83
53 54 8.933955 CGCAATTTTATAGATCACGTTACAAAG 58.066 33.333 0.00 0.00 0.00 2.77
54 55 9.221775 GCAATTTTATAGATCACGTTACAAAGG 57.778 33.333 0.00 0.00 0.00 3.11
55 56 9.221775 CAATTTTATAGATCACGTTACAAAGGC 57.778 33.333 0.00 0.00 0.00 4.35
56 57 8.732746 ATTTTATAGATCACGTTACAAAGGCT 57.267 30.769 0.00 0.00 0.00 4.58
57 58 9.826574 ATTTTATAGATCACGTTACAAAGGCTA 57.173 29.630 0.00 0.00 0.00 3.93
58 59 9.656040 TTTTATAGATCACGTTACAAAGGCTAA 57.344 29.630 0.00 0.00 0.00 3.09
59 60 9.826574 TTTATAGATCACGTTACAAAGGCTAAT 57.173 29.630 0.00 0.00 0.00 1.73
60 61 9.826574 TTATAGATCACGTTACAAAGGCTAATT 57.173 29.630 0.00 0.00 0.00 1.40
61 62 6.422776 AGATCACGTTACAAAGGCTAATTG 57.577 37.500 0.00 0.00 0.00 2.32
62 63 5.354234 AGATCACGTTACAAAGGCTAATTGG 59.646 40.000 4.12 0.00 32.02 3.16
63 64 4.643463 TCACGTTACAAAGGCTAATTGGA 58.357 39.130 4.12 0.00 32.02 3.53
64 65 4.453136 TCACGTTACAAAGGCTAATTGGAC 59.547 41.667 4.12 0.00 32.02 4.02
65 66 3.434299 ACGTTACAAAGGCTAATTGGACG 59.566 43.478 19.41 19.41 42.18 4.79
66 67 3.680937 CGTTACAAAGGCTAATTGGACGA 59.319 43.478 17.62 0.00 40.58 4.20
67 68 4.152759 CGTTACAAAGGCTAATTGGACGAA 59.847 41.667 17.62 1.31 40.58 3.85
68 69 5.334260 CGTTACAAAGGCTAATTGGACGAAA 60.334 40.000 17.62 0.00 40.58 3.46
69 70 6.617879 GTTACAAAGGCTAATTGGACGAAAT 58.382 36.000 4.12 0.00 32.02 2.17
70 71 5.722021 ACAAAGGCTAATTGGACGAAATT 57.278 34.783 4.12 0.00 34.24 1.82
71 72 5.469479 ACAAAGGCTAATTGGACGAAATTG 58.531 37.500 4.12 0.00 32.16 2.32
72 73 5.242838 ACAAAGGCTAATTGGACGAAATTGA 59.757 36.000 10.72 0.00 32.16 2.57
73 74 5.567138 AAGGCTAATTGGACGAAATTGAG 57.433 39.130 0.00 0.00 32.16 3.02
74 75 4.843728 AGGCTAATTGGACGAAATTGAGA 58.156 39.130 0.00 0.00 32.16 3.27
75 76 4.878397 AGGCTAATTGGACGAAATTGAGAG 59.122 41.667 0.00 0.00 32.16 3.20
76 77 4.876107 GGCTAATTGGACGAAATTGAGAGA 59.124 41.667 0.00 0.00 32.16 3.10
77 78 5.007136 GGCTAATTGGACGAAATTGAGAGAG 59.993 44.000 0.00 0.00 32.16 3.20
78 79 5.582665 GCTAATTGGACGAAATTGAGAGAGT 59.417 40.000 0.00 0.00 32.16 3.24
79 80 6.757010 GCTAATTGGACGAAATTGAGAGAGTA 59.243 38.462 0.00 0.00 32.16 2.59
80 81 7.043059 GCTAATTGGACGAAATTGAGAGAGTAG 60.043 40.741 0.00 0.00 32.16 2.57
81 82 5.723672 TTGGACGAAATTGAGAGAGTAGT 57.276 39.130 0.00 0.00 0.00 2.73
82 83 5.060662 TGGACGAAATTGAGAGAGTAGTG 57.939 43.478 0.00 0.00 0.00 2.74
83 84 4.523173 TGGACGAAATTGAGAGAGTAGTGT 59.477 41.667 0.00 0.00 0.00 3.55
84 85 5.708697 TGGACGAAATTGAGAGAGTAGTGTA 59.291 40.000 0.00 0.00 0.00 2.90
85 86 6.127980 TGGACGAAATTGAGAGAGTAGTGTAG 60.128 42.308 0.00 0.00 0.00 2.74
86 87 6.197364 ACGAAATTGAGAGAGTAGTGTAGG 57.803 41.667 0.00 0.00 0.00 3.18
87 88 5.125739 ACGAAATTGAGAGAGTAGTGTAGGG 59.874 44.000 0.00 0.00 0.00 3.53
88 89 5.125739 CGAAATTGAGAGAGTAGTGTAGGGT 59.874 44.000 0.00 0.00 0.00 4.34
89 90 6.350277 CGAAATTGAGAGAGTAGTGTAGGGTT 60.350 42.308 0.00 0.00 0.00 4.11
90 91 6.532988 AATTGAGAGAGTAGTGTAGGGTTC 57.467 41.667 0.00 0.00 0.00 3.62
91 92 4.652679 TGAGAGAGTAGTGTAGGGTTCA 57.347 45.455 0.00 0.00 0.00 3.18
92 93 4.994282 TGAGAGAGTAGTGTAGGGTTCAA 58.006 43.478 0.00 0.00 0.00 2.69
93 94 5.391256 TGAGAGAGTAGTGTAGGGTTCAAA 58.609 41.667 0.00 0.00 0.00 2.69
94 95 5.836898 TGAGAGAGTAGTGTAGGGTTCAAAA 59.163 40.000 0.00 0.00 0.00 2.44
95 96 6.099159 AGAGAGTAGTGTAGGGTTCAAAAC 57.901 41.667 0.00 0.00 0.00 2.43
108 109 4.937201 GTTCAAAACCTTTGGGATGAGT 57.063 40.909 0.00 0.00 36.25 3.41
110 111 5.769367 GTTCAAAACCTTTGGGATGAGTAC 58.231 41.667 0.00 0.00 36.25 2.73
111 112 4.403734 TCAAAACCTTTGGGATGAGTACC 58.596 43.478 0.00 0.00 36.25 3.34
112 113 4.141135 TCAAAACCTTTGGGATGAGTACCA 60.141 41.667 0.00 0.00 36.18 3.25
113 114 3.721087 AACCTTTGGGATGAGTACCAG 57.279 47.619 0.00 0.00 40.26 4.00
114 115 2.915869 ACCTTTGGGATGAGTACCAGA 58.084 47.619 0.00 0.00 40.26 3.86
115 116 3.256704 ACCTTTGGGATGAGTACCAGAA 58.743 45.455 0.00 0.00 40.26 3.02
116 117 3.009143 ACCTTTGGGATGAGTACCAGAAC 59.991 47.826 0.00 0.00 40.26 3.01
117 118 3.610911 CTTTGGGATGAGTACCAGAACC 58.389 50.000 0.00 0.00 40.26 3.62
118 119 1.191535 TGGGATGAGTACCAGAACCG 58.808 55.000 0.00 0.00 31.57 4.44
119 120 1.192428 GGGATGAGTACCAGAACCGT 58.808 55.000 0.00 0.00 0.00 4.83
120 121 1.134788 GGGATGAGTACCAGAACCGTG 60.135 57.143 0.00 0.00 0.00 4.94
121 122 1.641577 GATGAGTACCAGAACCGTGC 58.358 55.000 0.00 0.00 0.00 5.34
122 123 0.249398 ATGAGTACCAGAACCGTGCC 59.751 55.000 0.00 0.00 0.00 5.01
123 124 1.116536 TGAGTACCAGAACCGTGCCA 61.117 55.000 0.00 0.00 0.00 4.92
124 125 0.249398 GAGTACCAGAACCGTGCCAT 59.751 55.000 0.00 0.00 0.00 4.40
125 126 0.690762 AGTACCAGAACCGTGCCATT 59.309 50.000 0.00 0.00 0.00 3.16
126 127 0.802494 GTACCAGAACCGTGCCATTG 59.198 55.000 0.00 0.00 0.00 2.82
127 128 0.687920 TACCAGAACCGTGCCATTGA 59.312 50.000 0.00 0.00 0.00 2.57
128 129 0.038166 ACCAGAACCGTGCCATTGAT 59.962 50.000 0.00 0.00 0.00 2.57
129 130 1.280710 ACCAGAACCGTGCCATTGATA 59.719 47.619 0.00 0.00 0.00 2.15
130 131 1.670811 CCAGAACCGTGCCATTGATAC 59.329 52.381 0.00 0.00 0.00 2.24
131 132 2.355197 CAGAACCGTGCCATTGATACA 58.645 47.619 0.00 0.00 0.00 2.29
132 133 2.095853 CAGAACCGTGCCATTGATACAC 59.904 50.000 0.00 0.00 0.00 2.90
133 134 2.027192 AGAACCGTGCCATTGATACACT 60.027 45.455 0.00 0.00 32.07 3.55
134 135 2.024176 ACCGTGCCATTGATACACTC 57.976 50.000 0.00 0.00 32.07 3.51
135 136 0.930310 CCGTGCCATTGATACACTCG 59.070 55.000 0.00 0.00 32.07 4.18
136 137 0.930310 CGTGCCATTGATACACTCGG 59.070 55.000 0.00 0.00 32.07 4.63
137 138 0.657840 GTGCCATTGATACACTCGGC 59.342 55.000 0.00 0.00 40.02 5.54
138 139 0.541392 TGCCATTGATACACTCGGCT 59.459 50.000 0.00 0.00 40.27 5.52
139 140 1.221414 GCCATTGATACACTCGGCTC 58.779 55.000 0.00 0.00 36.58 4.70
140 141 1.871080 CCATTGATACACTCGGCTCC 58.129 55.000 0.00 0.00 0.00 4.70
141 142 1.414181 CCATTGATACACTCGGCTCCT 59.586 52.381 0.00 0.00 0.00 3.69
142 143 2.158900 CCATTGATACACTCGGCTCCTT 60.159 50.000 0.00 0.00 0.00 3.36
143 144 2.961526 TTGATACACTCGGCTCCTTC 57.038 50.000 0.00 0.00 0.00 3.46
144 145 2.145397 TGATACACTCGGCTCCTTCT 57.855 50.000 0.00 0.00 0.00 2.85
145 146 2.457598 TGATACACTCGGCTCCTTCTT 58.542 47.619 0.00 0.00 0.00 2.52
146 147 2.427453 TGATACACTCGGCTCCTTCTTC 59.573 50.000 0.00 0.00 0.00 2.87
147 148 1.183549 TACACTCGGCTCCTTCTTCC 58.816 55.000 0.00 0.00 0.00 3.46
148 149 1.219393 CACTCGGCTCCTTCTTCCC 59.781 63.158 0.00 0.00 0.00 3.97
149 150 1.990614 ACTCGGCTCCTTCTTCCCC 60.991 63.158 0.00 0.00 0.00 4.81
150 151 1.687493 CTCGGCTCCTTCTTCCCCT 60.687 63.158 0.00 0.00 0.00 4.79
151 152 1.229529 TCGGCTCCTTCTTCCCCTT 60.230 57.895 0.00 0.00 0.00 3.95
152 153 0.840722 TCGGCTCCTTCTTCCCCTTT 60.841 55.000 0.00 0.00 0.00 3.11
153 154 0.038310 CGGCTCCTTCTTCCCCTTTT 59.962 55.000 0.00 0.00 0.00 2.27
154 155 1.280998 CGGCTCCTTCTTCCCCTTTTA 59.719 52.381 0.00 0.00 0.00 1.52
155 156 2.724454 GGCTCCTTCTTCCCCTTTTAC 58.276 52.381 0.00 0.00 0.00 2.01
156 157 2.309162 GGCTCCTTCTTCCCCTTTTACT 59.691 50.000 0.00 0.00 0.00 2.24
157 158 3.522343 GGCTCCTTCTTCCCCTTTTACTA 59.478 47.826 0.00 0.00 0.00 1.82
158 159 4.166337 GGCTCCTTCTTCCCCTTTTACTAT 59.834 45.833 0.00 0.00 0.00 2.12
159 160 5.340110 GGCTCCTTCTTCCCCTTTTACTATT 60.340 44.000 0.00 0.00 0.00 1.73
160 161 5.823570 GCTCCTTCTTCCCCTTTTACTATTC 59.176 44.000 0.00 0.00 0.00 1.75
161 162 6.353169 GCTCCTTCTTCCCCTTTTACTATTCT 60.353 42.308 0.00 0.00 0.00 2.40
162 163 6.958767 TCCTTCTTCCCCTTTTACTATTCTG 58.041 40.000 0.00 0.00 0.00 3.02
163 164 6.733807 TCCTTCTTCCCCTTTTACTATTCTGA 59.266 38.462 0.00 0.00 0.00 3.27
164 165 7.051000 CCTTCTTCCCCTTTTACTATTCTGAG 58.949 42.308 0.00 0.00 0.00 3.35
165 166 7.092846 CCTTCTTCCCCTTTTACTATTCTGAGA 60.093 40.741 0.00 0.00 0.00 3.27
166 167 7.808279 TCTTCCCCTTTTACTATTCTGAGAA 57.192 36.000 0.00 0.00 0.00 2.87
167 168 7.621796 TCTTCCCCTTTTACTATTCTGAGAAC 58.378 38.462 0.00 0.00 0.00 3.01
168 169 7.458170 TCTTCCCCTTTTACTATTCTGAGAACT 59.542 37.037 0.00 0.00 0.00 3.01
169 170 6.947464 TCCCCTTTTACTATTCTGAGAACTG 58.053 40.000 0.00 0.00 0.00 3.16
170 171 5.586643 CCCCTTTTACTATTCTGAGAACTGC 59.413 44.000 0.00 0.00 0.00 4.40
171 172 6.173339 CCCTTTTACTATTCTGAGAACTGCA 58.827 40.000 0.00 0.00 0.00 4.41
172 173 6.825721 CCCTTTTACTATTCTGAGAACTGCAT 59.174 38.462 0.00 0.00 0.00 3.96
173 174 7.337942 CCCTTTTACTATTCTGAGAACTGCATT 59.662 37.037 0.00 0.00 0.00 3.56
174 175 8.180267 CCTTTTACTATTCTGAGAACTGCATTG 58.820 37.037 0.00 0.00 0.00 2.82
175 176 7.615582 TTTACTATTCTGAGAACTGCATTGG 57.384 36.000 0.00 0.00 0.00 3.16
176 177 5.171339 ACTATTCTGAGAACTGCATTGGT 57.829 39.130 0.00 0.00 0.00 3.67
177 178 5.181748 ACTATTCTGAGAACTGCATTGGTC 58.818 41.667 0.00 0.00 0.00 4.02
178 179 3.490439 TTCTGAGAACTGCATTGGTCA 57.510 42.857 0.00 0.00 0.00 4.02
179 180 2.771089 TCTGAGAACTGCATTGGTCAC 58.229 47.619 0.00 0.00 0.00 3.67
180 181 1.808945 CTGAGAACTGCATTGGTCACC 59.191 52.381 0.00 0.00 0.00 4.02
181 182 1.421268 TGAGAACTGCATTGGTCACCT 59.579 47.619 0.00 0.00 0.00 4.00
182 183 2.079925 GAGAACTGCATTGGTCACCTC 58.920 52.381 0.00 0.00 0.00 3.85
183 184 1.421268 AGAACTGCATTGGTCACCTCA 59.579 47.619 0.00 0.00 0.00 3.86
184 185 2.040813 AGAACTGCATTGGTCACCTCAT 59.959 45.455 0.00 0.00 0.00 2.90
185 186 2.119801 ACTGCATTGGTCACCTCATC 57.880 50.000 0.00 0.00 0.00 2.92
186 187 1.340405 ACTGCATTGGTCACCTCATCC 60.340 52.381 0.00 0.00 0.00 3.51
187 188 0.034186 TGCATTGGTCACCTCATCCC 60.034 55.000 0.00 0.00 0.00 3.85
188 189 0.753111 GCATTGGTCACCTCATCCCC 60.753 60.000 0.00 0.00 0.00 4.81
189 190 0.464373 CATTGGTCACCTCATCCCCG 60.464 60.000 0.00 0.00 0.00 5.73
190 191 2.270874 ATTGGTCACCTCATCCCCGC 62.271 60.000 0.00 0.00 0.00 6.13
191 192 3.399181 GGTCACCTCATCCCCGCA 61.399 66.667 0.00 0.00 0.00 5.69
192 193 2.668632 GTCACCTCATCCCCGCAA 59.331 61.111 0.00 0.00 0.00 4.85
193 194 1.002624 GTCACCTCATCCCCGCAAA 60.003 57.895 0.00 0.00 0.00 3.68
194 195 0.394352 GTCACCTCATCCCCGCAAAT 60.394 55.000 0.00 0.00 0.00 2.32
195 196 1.134220 GTCACCTCATCCCCGCAAATA 60.134 52.381 0.00 0.00 0.00 1.40
196 197 1.774254 TCACCTCATCCCCGCAAATAT 59.226 47.619 0.00 0.00 0.00 1.28
197 198 2.154462 CACCTCATCCCCGCAAATATC 58.846 52.381 0.00 0.00 0.00 1.63
198 199 1.073923 ACCTCATCCCCGCAAATATCC 59.926 52.381 0.00 0.00 0.00 2.59
199 200 1.614317 CCTCATCCCCGCAAATATCCC 60.614 57.143 0.00 0.00 0.00 3.85
200 201 1.073763 CTCATCCCCGCAAATATCCCA 59.926 52.381 0.00 0.00 0.00 4.37
201 202 1.496857 TCATCCCCGCAAATATCCCAA 59.503 47.619 0.00 0.00 0.00 4.12
202 203 2.109834 TCATCCCCGCAAATATCCCAAT 59.890 45.455 0.00 0.00 0.00 3.16
203 204 1.993956 TCCCCGCAAATATCCCAATG 58.006 50.000 0.00 0.00 0.00 2.82
204 205 0.318120 CCCCGCAAATATCCCAATGC 59.682 55.000 0.00 0.00 35.49 3.56
205 206 0.318120 CCCGCAAATATCCCAATGCC 59.682 55.000 0.00 0.00 35.41 4.40
206 207 1.331214 CCGCAAATATCCCAATGCCT 58.669 50.000 0.00 0.00 35.41 4.75
207 208 1.688197 CCGCAAATATCCCAATGCCTT 59.312 47.619 0.00 0.00 35.41 4.35
208 209 2.102925 CCGCAAATATCCCAATGCCTTT 59.897 45.455 0.00 0.00 35.41 3.11
209 210 3.125316 CGCAAATATCCCAATGCCTTTG 58.875 45.455 0.00 0.00 35.41 2.77
210 211 3.181477 CGCAAATATCCCAATGCCTTTGA 60.181 43.478 0.00 0.00 37.53 2.69
211 212 4.501915 CGCAAATATCCCAATGCCTTTGAT 60.502 41.667 0.00 0.00 37.53 2.57
212 213 5.278907 CGCAAATATCCCAATGCCTTTGATA 60.279 40.000 0.00 0.00 37.53 2.15
213 214 6.161381 GCAAATATCCCAATGCCTTTGATAG 58.839 40.000 0.00 0.00 37.53 2.08
214 215 6.015180 GCAAATATCCCAATGCCTTTGATAGA 60.015 38.462 0.00 0.00 37.53 1.98
215 216 7.471819 GCAAATATCCCAATGCCTTTGATAGAA 60.472 37.037 0.00 0.00 37.53 2.10
216 217 7.771927 AATATCCCAATGCCTTTGATAGAAG 57.228 36.000 0.00 0.00 37.53 2.85
217 218 4.591321 TCCCAATGCCTTTGATAGAAGT 57.409 40.909 0.00 0.00 37.53 3.01
218 219 4.272489 TCCCAATGCCTTTGATAGAAGTG 58.728 43.478 0.00 0.00 37.53 3.16
219 220 3.382546 CCCAATGCCTTTGATAGAAGTGG 59.617 47.826 0.00 0.00 37.53 4.00
220 221 3.382546 CCAATGCCTTTGATAGAAGTGGG 59.617 47.826 0.00 0.00 37.53 4.61
221 222 2.128771 TGCCTTTGATAGAAGTGGGC 57.871 50.000 0.00 0.00 38.67 5.36
222 223 1.635487 TGCCTTTGATAGAAGTGGGCT 59.365 47.619 0.00 0.00 38.93 5.19
223 224 2.019984 GCCTTTGATAGAAGTGGGCTG 58.980 52.381 0.00 0.00 35.73 4.85
224 225 2.648059 CCTTTGATAGAAGTGGGCTGG 58.352 52.381 0.00 0.00 0.00 4.85
225 226 2.239654 CCTTTGATAGAAGTGGGCTGGA 59.760 50.000 0.00 0.00 0.00 3.86
226 227 3.308402 CCTTTGATAGAAGTGGGCTGGAA 60.308 47.826 0.00 0.00 0.00 3.53
227 228 4.335416 CTTTGATAGAAGTGGGCTGGAAA 58.665 43.478 0.00 0.00 0.00 3.13
228 229 4.380843 TTGATAGAAGTGGGCTGGAAAA 57.619 40.909 0.00 0.00 0.00 2.29
229 230 3.686016 TGATAGAAGTGGGCTGGAAAAC 58.314 45.455 0.00 0.00 0.00 2.43
230 231 2.579410 TAGAAGTGGGCTGGAAAACC 57.421 50.000 0.00 0.00 0.00 3.27
231 232 0.537371 AGAAGTGGGCTGGAAAACCG 60.537 55.000 0.00 0.00 0.00 4.44
232 233 0.822121 GAAGTGGGCTGGAAAACCGT 60.822 55.000 0.00 0.00 0.00 4.83
233 234 0.822121 AAGTGGGCTGGAAAACCGTC 60.822 55.000 0.00 0.00 0.00 4.79
234 235 1.228154 GTGGGCTGGAAAACCGTCT 60.228 57.895 0.00 0.00 0.00 4.18
235 236 1.228124 TGGGCTGGAAAACCGTCTG 60.228 57.895 0.00 0.00 0.00 3.51
236 237 1.971695 GGGCTGGAAAACCGTCTGG 60.972 63.158 0.00 0.00 42.84 3.86
237 238 2.626780 GGCTGGAAAACCGTCTGGC 61.627 63.158 0.00 0.00 39.70 4.85
238 239 2.626780 GCTGGAAAACCGTCTGGCC 61.627 63.158 0.00 0.00 39.70 5.36
239 240 1.971695 CTGGAAAACCGTCTGGCCC 60.972 63.158 0.00 0.00 39.70 5.80
240 241 2.675423 GGAAAACCGTCTGGCCCC 60.675 66.667 0.00 0.00 39.70 5.80
241 242 3.053896 GAAAACCGTCTGGCCCCG 61.054 66.667 0.00 0.00 39.70 5.73
320 321 3.618120 ATAACAAAGGGATCATGGGGG 57.382 47.619 0.00 0.00 0.00 5.40
325 326 0.046242 AAGGGATCATGGGGGAGTCA 59.954 55.000 0.00 0.00 0.00 3.41
332 333 1.620589 ATGGGGGAGTCACAGCCAT 60.621 57.895 0.00 0.00 0.00 4.40
354 355 0.550914 ATGGCGCCCCTGATCTAAAA 59.449 50.000 26.77 0.00 0.00 1.52
439 440 5.354234 AGTCACATCGAACAAAAAGTCTTGT 59.646 36.000 0.00 0.00 41.31 3.16
718 719 1.358152 TTTGAGACTCCCCCGTCAAT 58.642 50.000 0.00 0.00 36.38 2.57
780 781 1.599518 CCAACAGCAGGTACCGCAA 60.600 57.895 24.11 0.00 0.00 4.85
821 822 4.612412 TTCGCCGTTCCCGCTTGT 62.612 61.111 0.00 0.00 0.00 3.16
822 823 2.712325 TTTCGCCGTTCCCGCTTGTA 62.712 55.000 0.00 0.00 0.00 2.41
823 824 3.186047 CGCCGTTCCCGCTTGTAG 61.186 66.667 0.00 0.00 0.00 2.74
824 825 2.818274 GCCGTTCCCGCTTGTAGG 60.818 66.667 0.00 0.00 0.00 3.18
825 826 2.975536 CCGTTCCCGCTTGTAGGA 59.024 61.111 0.00 0.00 0.00 2.94
826 827 1.294138 CCGTTCCCGCTTGTAGGAA 59.706 57.895 0.00 0.00 39.86 3.36
829 830 1.294138 TTCCCGCTTGTAGGAACGG 59.706 57.895 0.00 0.00 45.21 4.44
833 834 3.806591 CGCTTGTAGGAACGGAAGA 57.193 52.632 0.00 0.00 0.00 2.87
834 835 1.630148 CGCTTGTAGGAACGGAAGAG 58.370 55.000 0.00 0.00 0.00 2.85
835 836 1.201647 CGCTTGTAGGAACGGAAGAGA 59.798 52.381 0.00 0.00 0.00 3.10
836 837 2.732597 CGCTTGTAGGAACGGAAGAGAG 60.733 54.545 0.00 0.00 0.00 3.20
837 838 2.492484 GCTTGTAGGAACGGAAGAGAGA 59.508 50.000 0.00 0.00 0.00 3.10
838 839 3.056749 GCTTGTAGGAACGGAAGAGAGAA 60.057 47.826 0.00 0.00 0.00 2.87
839 840 4.560919 GCTTGTAGGAACGGAAGAGAGAAA 60.561 45.833 0.00 0.00 0.00 2.52
840 841 4.785511 TGTAGGAACGGAAGAGAGAAAG 57.214 45.455 0.00 0.00 0.00 2.62
841 842 2.753055 AGGAACGGAAGAGAGAAAGC 57.247 50.000 0.00 0.00 0.00 3.51
842 843 2.252714 AGGAACGGAAGAGAGAAAGCT 58.747 47.619 0.00 0.00 0.00 3.74
843 844 2.028567 AGGAACGGAAGAGAGAAAGCTG 60.029 50.000 0.00 0.00 0.00 4.24
844 845 2.028930 GGAACGGAAGAGAGAAAGCTGA 60.029 50.000 0.00 0.00 0.00 4.26
845 846 3.555168 GGAACGGAAGAGAGAAAGCTGAA 60.555 47.826 0.00 0.00 0.00 3.02
846 847 3.753294 ACGGAAGAGAGAAAGCTGAAA 57.247 42.857 0.00 0.00 0.00 2.69
847 848 3.394719 ACGGAAGAGAGAAAGCTGAAAC 58.605 45.455 0.00 0.00 0.00 2.78
848 849 2.410053 CGGAAGAGAGAAAGCTGAAACG 59.590 50.000 0.00 0.00 0.00 3.60
849 850 3.654414 GGAAGAGAGAAAGCTGAAACGA 58.346 45.455 0.00 0.00 0.00 3.85
850 851 3.677596 GGAAGAGAGAAAGCTGAAACGAG 59.322 47.826 0.00 0.00 0.00 4.18
851 852 2.682836 AGAGAGAAAGCTGAAACGAGC 58.317 47.619 0.00 0.00 39.46 5.03
852 853 1.729517 GAGAGAAAGCTGAAACGAGCC 59.270 52.381 0.00 0.00 40.08 4.70
853 854 0.799393 GAGAAAGCTGAAACGAGCCC 59.201 55.000 0.00 0.00 40.08 5.19
854 855 0.108585 AGAAAGCTGAAACGAGCCCA 59.891 50.000 0.00 0.00 40.08 5.36
855 856 0.238553 GAAAGCTGAAACGAGCCCAC 59.761 55.000 0.00 0.00 40.08 4.61
856 857 1.507141 AAAGCTGAAACGAGCCCACG 61.507 55.000 0.00 0.00 40.08 4.94
857 858 3.423154 GCTGAAACGAGCCCACGG 61.423 66.667 0.00 0.00 37.61 4.94
858 859 2.030562 CTGAAACGAGCCCACGGT 59.969 61.111 0.00 0.00 37.61 4.83
859 860 1.290955 CTGAAACGAGCCCACGGTA 59.709 57.895 0.00 0.00 37.61 4.02
860 861 0.736325 CTGAAACGAGCCCACGGTAG 60.736 60.000 0.00 0.00 37.61 3.18
861 862 2.047560 AAACGAGCCCACGGTAGC 60.048 61.111 0.00 0.00 37.61 3.58
862 863 3.600898 AAACGAGCCCACGGTAGCC 62.601 63.158 0.00 0.00 37.61 3.93
864 865 4.514577 CGAGCCCACGGTAGCCAG 62.515 72.222 0.00 0.00 0.00 4.85
865 866 4.840005 GAGCCCACGGTAGCCAGC 62.840 72.222 0.00 0.00 0.00 4.85
868 869 4.028490 CCCACGGTAGCCAGCCAA 62.028 66.667 0.00 0.00 0.00 4.52
869 870 2.436646 CCACGGTAGCCAGCCAAG 60.437 66.667 0.00 0.00 0.00 3.61
870 871 3.127533 CACGGTAGCCAGCCAAGC 61.128 66.667 0.00 0.00 0.00 4.01
871 872 4.410400 ACGGTAGCCAGCCAAGCC 62.410 66.667 0.00 0.00 0.00 4.35
873 874 4.047125 GGTAGCCAGCCAAGCCCA 62.047 66.667 0.00 0.00 0.00 5.36
874 875 2.439156 GTAGCCAGCCAAGCCCAG 60.439 66.667 0.00 0.00 0.00 4.45
875 876 2.610546 TAGCCAGCCAAGCCCAGA 60.611 61.111 0.00 0.00 0.00 3.86
1124 1129 2.436646 CCGATGGCTTCCACGCTT 60.437 61.111 0.00 0.00 35.80 4.68
1336 1341 1.338579 TGTCTGATACACGCATGGCAA 60.339 47.619 0.00 0.00 31.43 4.52
1356 1361 6.095300 TGGCAATATGACAACCAGAATTGTAG 59.905 38.462 0.00 0.00 42.89 2.74
1393 1405 5.914635 GGTAATGGTGATCGTTATGCAATTG 59.085 40.000 0.00 0.00 0.00 2.32
1417 1429 3.033185 CGTGCGAAGGTGTTTAACTTTG 58.967 45.455 0.00 0.00 0.00 2.77
1448 1460 3.701542 TGGTACTCCTATCAAGCTGAGTG 59.298 47.826 11.33 0.00 38.46 3.51
1454 1466 7.372260 ACTCCTATCAAGCTGAGTGAAATAT 57.628 36.000 1.61 0.00 36.74 1.28
1455 1467 7.441017 ACTCCTATCAAGCTGAGTGAAATATC 58.559 38.462 1.61 0.00 36.74 1.63
1456 1468 7.289782 ACTCCTATCAAGCTGAGTGAAATATCT 59.710 37.037 1.61 0.00 36.74 1.98
1457 1469 8.712228 TCCTATCAAGCTGAGTGAAATATCTA 57.288 34.615 0.00 0.00 0.00 1.98
1458 1470 8.801299 TCCTATCAAGCTGAGTGAAATATCTAG 58.199 37.037 0.00 0.00 0.00 2.43
1490 1502 5.961897 AGATGGCAAATCTGAAGGGATATT 58.038 37.500 0.00 0.00 0.00 1.28
1492 1504 7.706674 AGATGGCAAATCTGAAGGGATATTAT 58.293 34.615 0.00 0.00 0.00 1.28
1523 1535 6.478673 GGGAAGTGTTCATTTTAACTTGGTTG 59.521 38.462 0.00 0.00 33.14 3.77
1531 1543 6.496571 TCATTTTAACTTGGTTGGTTGTACG 58.503 36.000 0.00 0.00 0.00 3.67
1537 1549 1.898902 TGGTTGGTTGTACGAATGGG 58.101 50.000 0.00 0.00 0.00 4.00
1539 1551 1.271488 GGTTGGTTGTACGAATGGGGA 60.271 52.381 0.00 0.00 0.00 4.81
1565 1577 1.202687 TCACTTCACTGCCTCAGTTGG 60.203 52.381 0.00 0.00 42.59 3.77
1591 1759 5.537674 GTGGATCATATTTTGGCCTTGAGAT 59.462 40.000 3.32 0.00 0.00 2.75
1693 1861 0.950555 TCGTGTGTGCTGCCTCATTC 60.951 55.000 0.00 0.00 0.00 2.67
1694 1862 1.229975 CGTGTGTGCTGCCTCATTCA 61.230 55.000 0.00 0.00 0.00 2.57
1695 1863 1.171308 GTGTGTGCTGCCTCATTCAT 58.829 50.000 0.00 0.00 0.00 2.57
1696 1864 1.135489 GTGTGTGCTGCCTCATTCATG 60.135 52.381 0.00 0.00 0.00 3.07
1697 1865 1.171308 GTGTGCTGCCTCATTCATGT 58.829 50.000 0.00 0.00 0.00 3.21
1698 1866 1.135489 GTGTGCTGCCTCATTCATGTG 60.135 52.381 0.00 0.00 0.00 3.21
1699 1867 1.171308 GTGCTGCCTCATTCATGTGT 58.829 50.000 0.00 0.00 0.00 3.72
1700 1868 1.135489 GTGCTGCCTCATTCATGTGTG 60.135 52.381 0.00 0.00 0.00 3.82
1701 1869 1.171308 GCTGCCTCATTCATGTGTGT 58.829 50.000 0.00 0.00 0.00 3.72
1702 1870 1.542915 GCTGCCTCATTCATGTGTGTT 59.457 47.619 0.00 0.00 0.00 3.32
1703 1871 2.029649 GCTGCCTCATTCATGTGTGTTT 60.030 45.455 0.00 0.00 0.00 2.83
1704 1872 3.191162 GCTGCCTCATTCATGTGTGTTTA 59.809 43.478 0.00 0.00 0.00 2.01
1825 2005 9.091220 GATATACTTGGGTATCTACAAACCTCT 57.909 37.037 0.00 0.00 39.19 3.69
1826 2006 7.750947 ATACTTGGGTATCTACAAACCTCTT 57.249 36.000 0.00 0.00 33.81 2.85
1869 2049 2.161609 CCCCTAGCAAACTTACGCTTTG 59.838 50.000 0.00 0.00 39.70 2.77
1899 2079 6.331369 ACAAGTGTCCATAACAATTCCAAG 57.669 37.500 0.00 0.00 42.18 3.61
1907 2087 9.099722 TGTCCATAACAATTCCAAGGGGAAAAC 62.100 40.741 0.00 0.00 44.16 2.43
1935 2115 9.801714 GAAGATGTTCATGCTTGTTTAATTTTG 57.198 29.630 0.00 0.00 32.36 2.44
2099 2279 8.694581 AGTAGTATTCTTATGTGTCTACCCTC 57.305 38.462 0.00 0.00 0.00 4.30
2136 2316 5.368145 TGTTAGCAACTGAAACATGTCTCT 58.632 37.500 0.00 0.00 0.00 3.10
2152 2332 9.950496 AACATGTCTCTTTAATAGTCATTCAGT 57.050 29.630 0.00 0.00 0.00 3.41
2363 2543 6.352516 AGGATGATTTGGTTCAGATACAGTC 58.647 40.000 0.00 0.00 0.00 3.51
2460 2640 3.664107 CCTTGCAGCTGTAGAAGTGTTA 58.336 45.455 16.64 0.00 0.00 2.41
2550 2730 2.612219 ATACCGCGCTTGCATTTGCC 62.612 55.000 5.56 0.00 41.18 4.52
2581 2761 1.890489 GGTATTGCCCTTGTTCCGTTT 59.110 47.619 0.00 0.00 0.00 3.60
2653 2833 4.159321 TCAGGATGAAGCTAACTCAGAGTG 59.841 45.833 3.05 0.00 45.97 3.51
2720 2921 9.686683 CAAATTAATAGCCCCATAGCTTAGTAT 57.313 33.333 0.00 0.00 41.41 2.12
2724 2925 9.734984 TTAATAGCCCCATAGCTTAGTATTTTC 57.265 33.333 0.00 0.00 41.41 2.29
2787 2988 1.339438 TGCAGCTTTGAGGATGGTCTC 60.339 52.381 0.00 0.00 0.00 3.36
2862 3063 6.903883 TGTGTACTTTGAGTTTCTGACTTC 57.096 37.500 0.00 0.00 39.19 3.01
2881 3082 5.513233 ACTTCCCAAATAGATTGCTCATGT 58.487 37.500 0.00 0.00 37.73 3.21
2908 3109 6.753913 TTATCTTTGTAGGATGCCTCAGAT 57.246 37.500 0.00 0.00 34.61 2.90
2935 3136 3.309682 CCAATAGTGCGATGGTTAGTGTG 59.690 47.826 0.00 0.00 0.00 3.82
2974 3175 2.919666 AGGTGCAACAATTATGCGAC 57.080 45.000 3.64 9.00 46.76 5.19
3050 3251 4.838423 TCTGTCCTGTAAGTCATTCCTGAA 59.162 41.667 0.00 0.00 31.85 3.02
3053 3254 4.806247 GTCCTGTAAGTCATTCCTGAATCG 59.194 45.833 0.00 0.00 31.85 3.34
3054 3255 4.122776 CCTGTAAGTCATTCCTGAATCGG 58.877 47.826 0.00 0.00 31.85 4.18
3076 3277 4.948004 GGGAGGTTATTTGTTTCCTACTGG 59.052 45.833 0.00 0.00 31.99 4.00
3286 3498 7.959109 GTGTGAAACCTGGTTATCGTAATTTAC 59.041 37.037 13.37 2.31 34.36 2.01
3349 3562 4.761739 TGAATAGTGCTCCTTGGTCAAAAG 59.238 41.667 0.00 0.00 0.00 2.27
3401 3615 9.953697 TGTTACGCAACTTTGACTATAAATTTT 57.046 25.926 0.00 0.00 35.56 1.82
3430 3644 5.448225 GCAATATGTCAGACAACAGACCATG 60.448 44.000 7.50 0.48 32.71 3.66
3479 3693 7.651808 CAAGAGTACAATTGGTGAAATGTCTT 58.348 34.615 10.83 3.82 0.00 3.01
3480 3694 7.206981 AGAGTACAATTGGTGAAATGTCTTG 57.793 36.000 10.83 0.00 0.00 3.02
3482 3696 7.285401 AGAGTACAATTGGTGAAATGTCTTGTT 59.715 33.333 10.83 0.00 0.00 2.83
3484 3698 5.358922 ACAATTGGTGAAATGTCTTGTTGG 58.641 37.500 10.83 0.00 0.00 3.77
3485 3699 5.104982 ACAATTGGTGAAATGTCTTGTTGGT 60.105 36.000 10.83 0.00 0.00 3.67
3486 3700 5.612725 ATTGGTGAAATGTCTTGTTGGTT 57.387 34.783 0.00 0.00 0.00 3.67
3487 3701 4.647424 TGGTGAAATGTCTTGTTGGTTC 57.353 40.909 0.00 0.00 0.00 3.62
3488 3702 3.383185 TGGTGAAATGTCTTGTTGGTTCC 59.617 43.478 0.00 0.00 0.00 3.62
3490 3704 3.636764 GTGAAATGTCTTGTTGGTTCCCT 59.363 43.478 0.00 0.00 0.00 4.20
3491 3705 4.099419 GTGAAATGTCTTGTTGGTTCCCTT 59.901 41.667 0.00 0.00 0.00 3.95
3495 3709 4.464069 TGTCTTGTTGGTTCCCTTTTTG 57.536 40.909 0.00 0.00 0.00 2.44
3496 3710 3.835395 TGTCTTGTTGGTTCCCTTTTTGT 59.165 39.130 0.00 0.00 0.00 2.83
3497 3711 5.017490 TGTCTTGTTGGTTCCCTTTTTGTA 58.983 37.500 0.00 0.00 0.00 2.41
3498 3712 5.480772 TGTCTTGTTGGTTCCCTTTTTGTAA 59.519 36.000 0.00 0.00 0.00 2.41
3499 3713 6.155393 TGTCTTGTTGGTTCCCTTTTTGTAAT 59.845 34.615 0.00 0.00 0.00 1.89
3500 3714 7.342284 TGTCTTGTTGGTTCCCTTTTTGTAATA 59.658 33.333 0.00 0.00 0.00 0.98
3501 3715 8.364894 GTCTTGTTGGTTCCCTTTTTGTAATAT 58.635 33.333 0.00 0.00 0.00 1.28
3502 3716 8.929487 TCTTGTTGGTTCCCTTTTTGTAATATT 58.071 29.630 0.00 0.00 0.00 1.28
3503 3717 8.894768 TTGTTGGTTCCCTTTTTGTAATATTG 57.105 30.769 0.00 0.00 0.00 1.90
3551 3765 5.249780 TGGTGGTGAAGGCTAAGAAAATA 57.750 39.130 0.00 0.00 0.00 1.40
3559 3773 7.042658 GGTGAAGGCTAAGAAAATATCACTACG 60.043 40.741 9.31 0.00 36.91 3.51
3573 3787 8.662781 AATATCACTACGTGCATTCTAACATT 57.337 30.769 0.00 0.00 32.98 2.71
3705 3953 8.893727 GTTGCATAGTCATAGTAATCAAAGGTT 58.106 33.333 0.00 0.00 0.00 3.50
3706 3954 9.461312 TTGCATAGTCATAGTAATCAAAGGTTT 57.539 29.630 0.00 0.00 0.00 3.27
3707 3955 8.892723 TGCATAGTCATAGTAATCAAAGGTTTG 58.107 33.333 0.00 0.00 39.48 2.93
3771 4019 1.723608 TTGCTGGTGCTTTCCACACG 61.724 55.000 0.00 0.00 46.50 4.49
3830 4078 3.521560 CGTTGGCTGCTACAGAGATTAA 58.478 45.455 0.00 0.00 32.44 1.40
3888 4136 0.252881 AGCCCCACTCAGATCCTGAA 60.253 55.000 0.00 0.00 40.18 3.02
3933 4181 3.892588 AGCAGGTATTGGCTCTAGACTAC 59.107 47.826 0.00 0.00 34.76 2.73
3944 4192 5.480422 TGGCTCTAGACTACACTTGAATTCA 59.520 40.000 3.38 3.38 0.00 2.57
3973 4221 5.182001 GCAGCCCTATTATACAATGACTTGG 59.818 44.000 0.00 0.00 36.64 3.61
3982 4234 0.518636 CAATGACTTGGGCGTGACTG 59.481 55.000 0.00 0.00 0.00 3.51
4074 4326 4.100189 GGCCTTGAGAAGAGCTATGAACTA 59.900 45.833 0.00 0.00 0.00 2.24
4077 4329 4.927978 TGAGAAGAGCTATGAACTAGGC 57.072 45.455 0.00 0.00 0.00 3.93
4080 4332 2.478872 AGAGCTATGAACTAGGCCCA 57.521 50.000 0.00 0.00 0.00 5.36
4097 4349 4.045462 AGGCCCAGGAAAGGTAAAAATAGT 59.955 41.667 0.00 0.00 0.00 2.12
4150 4406 7.123997 ACAAGTCTTCAGAGTCTGTGATGATAT 59.876 37.037 19.53 7.81 32.52 1.63
4253 4509 0.099436 GAACATTGGCGCATGAGACC 59.901 55.000 10.83 1.29 0.00 3.85
4256 4512 1.028330 CATTGGCGCATGAGACCTGT 61.028 55.000 10.83 0.00 0.00 4.00
4274 4541 6.777580 AGACCTGTTTATAGGGGCAAATAATG 59.222 38.462 0.00 0.00 42.35 1.90
4277 4544 7.287696 ACCTGTTTATAGGGGCAAATAATGAAG 59.712 37.037 0.00 0.00 42.35 3.02
4280 4547 9.702253 TGTTTATAGGGGCAAATAATGAAGTTA 57.298 29.630 0.00 0.00 0.00 2.24
4322 4590 3.762288 AGCGACACTCCTGAATGTACTAA 59.238 43.478 0.00 0.00 0.00 2.24
4473 4743 4.460382 TGAGGACCAGAATGAAATTTCAGC 59.540 41.667 24.17 18.24 41.08 4.26
4488 4758 9.507329 TGAAATTTCAGCTATAGTTCTGAGTTT 57.493 29.630 16.91 15.02 40.07 2.66
4525 4795 1.072173 CCCATGGTTCACTGTCTGACA 59.928 52.381 11.73 10.50 0.00 3.58
4535 4805 3.055602 TCACTGTCTGACATCCCATTCTG 60.056 47.826 11.45 0.00 0.00 3.02
4600 4870 1.639280 CAAACAAAACGCAAGGCTGT 58.361 45.000 0.00 0.00 46.39 4.40
4601 4871 1.587946 CAAACAAAACGCAAGGCTGTC 59.412 47.619 0.00 0.00 46.39 3.51
4715 4985 5.862924 TCGGAAAGACAAATGCTAGAAAG 57.137 39.130 0.00 0.00 0.00 2.62
4716 4986 4.695455 TCGGAAAGACAAATGCTAGAAAGG 59.305 41.667 0.00 0.00 0.00 3.11
4784 5055 3.003068 GCAATCTTGATGATCCCTTCACG 59.997 47.826 0.00 0.00 37.11 4.35
4993 5294 1.176527 GCCATTGGCTTAACTCAGCA 58.823 50.000 20.66 0.00 46.69 4.41
5011 5312 0.100325 CAAACGTTGTGCTCTTGCCA 59.900 50.000 0.00 0.00 38.71 4.92
5018 5319 3.520569 GTTGTGCTCTTGCCAAAGAAAA 58.479 40.909 0.00 0.00 41.89 2.29
5046 5347 2.027561 CGGAGGGAATTGGTGACTACAA 60.028 50.000 0.00 0.00 0.00 2.41
5153 5454 0.727122 CAAGGCTCAAAGCGCTTTCG 60.727 55.000 31.63 24.52 43.62 3.46
5337 5638 6.721571 CTTTCCTAGCAAATTTCGTGAGTA 57.278 37.500 0.00 0.00 0.00 2.59
5345 5646 2.736144 ATTTCGTGAGTAGGTTGCGA 57.264 45.000 0.00 0.00 0.00 5.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.627699 CCATAGTTGTGGCAAACAGGTT 59.372 45.455 12.71 0.00 40.74 3.50
5 6 2.158534 TCCATAGTTGTGGCAAACAGGT 60.159 45.455 12.71 0.00 40.74 4.00
6 7 2.228822 GTCCATAGTTGTGGCAAACAGG 59.771 50.000 12.71 11.13 40.74 4.00
7 8 2.095768 CGTCCATAGTTGTGGCAAACAG 60.096 50.000 12.71 4.90 40.74 3.16
8 9 1.876799 CGTCCATAGTTGTGGCAAACA 59.123 47.619 12.71 0.00 39.19 2.83
9 10 1.401018 GCGTCCATAGTTGTGGCAAAC 60.401 52.381 0.00 0.00 39.19 2.93
10 11 0.878416 GCGTCCATAGTTGTGGCAAA 59.122 50.000 0.00 0.00 39.19 3.68
11 12 0.250510 TGCGTCCATAGTTGTGGCAA 60.251 50.000 0.00 0.00 39.19 4.52
12 13 0.250510 TTGCGTCCATAGTTGTGGCA 60.251 50.000 0.00 0.00 39.19 4.92
13 14 1.094785 ATTGCGTCCATAGTTGTGGC 58.905 50.000 0.00 0.00 39.19 5.01
14 15 3.848272 AAATTGCGTCCATAGTTGTGG 57.152 42.857 0.00 0.00 40.76 4.17
15 16 7.915508 TCTATAAAATTGCGTCCATAGTTGTG 58.084 34.615 0.00 0.00 0.00 3.33
16 17 8.677148 ATCTATAAAATTGCGTCCATAGTTGT 57.323 30.769 0.00 0.00 0.00 3.32
17 18 8.773645 TGATCTATAAAATTGCGTCCATAGTTG 58.226 33.333 0.00 0.00 0.00 3.16
18 19 8.774586 GTGATCTATAAAATTGCGTCCATAGTT 58.225 33.333 0.00 0.00 0.00 2.24
19 20 7.116376 CGTGATCTATAAAATTGCGTCCATAGT 59.884 37.037 0.00 0.00 0.00 2.12
20 21 7.116376 ACGTGATCTATAAAATTGCGTCCATAG 59.884 37.037 0.00 0.00 0.00 2.23
21 22 6.926826 ACGTGATCTATAAAATTGCGTCCATA 59.073 34.615 0.00 0.00 0.00 2.74
22 23 5.758296 ACGTGATCTATAAAATTGCGTCCAT 59.242 36.000 0.00 0.00 0.00 3.41
23 24 5.113383 ACGTGATCTATAAAATTGCGTCCA 58.887 37.500 0.00 0.00 0.00 4.02
24 25 5.652744 ACGTGATCTATAAAATTGCGTCC 57.347 39.130 0.00 0.00 0.00 4.79
25 26 7.614908 TGTAACGTGATCTATAAAATTGCGTC 58.385 34.615 0.00 0.00 0.00 5.19
26 27 7.528481 TGTAACGTGATCTATAAAATTGCGT 57.472 32.000 0.00 0.00 0.00 5.24
27 28 8.814733 TTTGTAACGTGATCTATAAAATTGCG 57.185 30.769 0.00 0.00 0.00 4.85
28 29 9.221775 CCTTTGTAACGTGATCTATAAAATTGC 57.778 33.333 0.00 0.00 0.00 3.56
29 30 9.221775 GCCTTTGTAACGTGATCTATAAAATTG 57.778 33.333 0.00 0.00 0.00 2.32
30 31 9.174166 AGCCTTTGTAACGTGATCTATAAAATT 57.826 29.630 0.00 0.00 0.00 1.82
31 32 8.732746 AGCCTTTGTAACGTGATCTATAAAAT 57.267 30.769 0.00 0.00 0.00 1.82
32 33 9.656040 TTAGCCTTTGTAACGTGATCTATAAAA 57.344 29.630 0.00 0.00 0.00 1.52
33 34 9.826574 ATTAGCCTTTGTAACGTGATCTATAAA 57.173 29.630 0.00 0.00 0.00 1.40
34 35 9.826574 AATTAGCCTTTGTAACGTGATCTATAA 57.173 29.630 0.00 0.00 0.00 0.98
35 36 9.256477 CAATTAGCCTTTGTAACGTGATCTATA 57.744 33.333 0.00 0.00 0.00 1.31
36 37 7.226720 CCAATTAGCCTTTGTAACGTGATCTAT 59.773 37.037 0.00 0.00 0.00 1.98
37 38 6.537301 CCAATTAGCCTTTGTAACGTGATCTA 59.463 38.462 0.00 0.00 0.00 1.98
38 39 5.354234 CCAATTAGCCTTTGTAACGTGATCT 59.646 40.000 0.00 0.00 0.00 2.75
39 40 5.353123 TCCAATTAGCCTTTGTAACGTGATC 59.647 40.000 0.00 0.00 0.00 2.92
40 41 5.123344 GTCCAATTAGCCTTTGTAACGTGAT 59.877 40.000 0.00 0.00 0.00 3.06
41 42 4.453136 GTCCAATTAGCCTTTGTAACGTGA 59.547 41.667 0.00 0.00 0.00 4.35
42 43 4.668177 CGTCCAATTAGCCTTTGTAACGTG 60.668 45.833 0.00 0.00 31.86 4.49
43 44 3.434299 CGTCCAATTAGCCTTTGTAACGT 59.566 43.478 0.00 0.00 31.86 3.99
44 45 3.680937 TCGTCCAATTAGCCTTTGTAACG 59.319 43.478 8.48 8.48 34.93 3.18
45 46 5.616488 TTCGTCCAATTAGCCTTTGTAAC 57.384 39.130 0.00 0.00 0.00 2.50
46 47 6.827586 ATTTCGTCCAATTAGCCTTTGTAA 57.172 33.333 0.00 0.00 0.00 2.41
47 48 6.431543 TCAATTTCGTCCAATTAGCCTTTGTA 59.568 34.615 0.00 0.00 0.00 2.41
48 49 5.242838 TCAATTTCGTCCAATTAGCCTTTGT 59.757 36.000 0.00 0.00 0.00 2.83
49 50 5.708948 TCAATTTCGTCCAATTAGCCTTTG 58.291 37.500 0.00 0.00 0.00 2.77
50 51 5.710099 TCTCAATTTCGTCCAATTAGCCTTT 59.290 36.000 0.00 0.00 0.00 3.11
51 52 5.253330 TCTCAATTTCGTCCAATTAGCCTT 58.747 37.500 0.00 0.00 0.00 4.35
52 53 4.843728 TCTCAATTTCGTCCAATTAGCCT 58.156 39.130 0.00 0.00 0.00 4.58
53 54 4.876107 TCTCTCAATTTCGTCCAATTAGCC 59.124 41.667 0.00 0.00 0.00 3.93
54 55 5.582665 ACTCTCTCAATTTCGTCCAATTAGC 59.417 40.000 0.00 0.00 0.00 3.09
55 56 7.976734 ACTACTCTCTCAATTTCGTCCAATTAG 59.023 37.037 0.00 0.00 0.00 1.73
56 57 7.759886 CACTACTCTCTCAATTTCGTCCAATTA 59.240 37.037 0.00 0.00 0.00 1.40
57 58 6.591834 CACTACTCTCTCAATTTCGTCCAATT 59.408 38.462 0.00 0.00 0.00 2.32
58 59 6.102663 CACTACTCTCTCAATTTCGTCCAAT 58.897 40.000 0.00 0.00 0.00 3.16
59 60 5.010719 ACACTACTCTCTCAATTTCGTCCAA 59.989 40.000 0.00 0.00 0.00 3.53
60 61 4.523173 ACACTACTCTCTCAATTTCGTCCA 59.477 41.667 0.00 0.00 0.00 4.02
61 62 5.061920 ACACTACTCTCTCAATTTCGTCC 57.938 43.478 0.00 0.00 0.00 4.79
62 63 6.259638 CCTACACTACTCTCTCAATTTCGTC 58.740 44.000 0.00 0.00 0.00 4.20
63 64 5.125739 CCCTACACTACTCTCTCAATTTCGT 59.874 44.000 0.00 0.00 0.00 3.85
64 65 5.125739 ACCCTACACTACTCTCTCAATTTCG 59.874 44.000 0.00 0.00 0.00 3.46
65 66 6.532988 ACCCTACACTACTCTCTCAATTTC 57.467 41.667 0.00 0.00 0.00 2.17
66 67 6.497259 TGAACCCTACACTACTCTCTCAATTT 59.503 38.462 0.00 0.00 0.00 1.82
67 68 6.017192 TGAACCCTACACTACTCTCTCAATT 58.983 40.000 0.00 0.00 0.00 2.32
68 69 5.580998 TGAACCCTACACTACTCTCTCAAT 58.419 41.667 0.00 0.00 0.00 2.57
69 70 4.994282 TGAACCCTACACTACTCTCTCAA 58.006 43.478 0.00 0.00 0.00 3.02
70 71 4.652679 TGAACCCTACACTACTCTCTCA 57.347 45.455 0.00 0.00 0.00 3.27
71 72 5.979288 TTTGAACCCTACACTACTCTCTC 57.021 43.478 0.00 0.00 0.00 3.20
72 73 5.011840 GGTTTTGAACCCTACACTACTCTCT 59.988 44.000 0.00 0.00 46.12 3.10
73 74 5.236282 GGTTTTGAACCCTACACTACTCTC 58.764 45.833 0.00 0.00 46.12 3.20
74 75 5.224821 GGTTTTGAACCCTACACTACTCT 57.775 43.478 0.00 0.00 46.12 3.24
87 88 4.937201 ACTCATCCCAAAGGTTTTGAAC 57.063 40.909 3.24 0.00 0.00 3.18
88 89 4.830600 GGTACTCATCCCAAAGGTTTTGAA 59.169 41.667 3.24 0.00 0.00 2.69
89 90 4.141135 TGGTACTCATCCCAAAGGTTTTGA 60.141 41.667 3.24 0.00 0.00 2.69
90 91 4.148838 TGGTACTCATCCCAAAGGTTTTG 58.851 43.478 0.00 0.00 0.00 2.44
91 92 4.105697 TCTGGTACTCATCCCAAAGGTTTT 59.894 41.667 0.00 0.00 0.00 2.43
92 93 3.655777 TCTGGTACTCATCCCAAAGGTTT 59.344 43.478 0.00 0.00 0.00 3.27
93 94 3.256704 TCTGGTACTCATCCCAAAGGTT 58.743 45.455 0.00 0.00 0.00 3.50
94 95 2.915869 TCTGGTACTCATCCCAAAGGT 58.084 47.619 0.00 0.00 0.00 3.50
95 96 3.610911 GTTCTGGTACTCATCCCAAAGG 58.389 50.000 0.00 0.00 0.00 3.11
96 97 3.610911 GGTTCTGGTACTCATCCCAAAG 58.389 50.000 0.00 0.00 0.00 2.77
97 98 2.027561 CGGTTCTGGTACTCATCCCAAA 60.028 50.000 0.00 0.00 0.00 3.28
98 99 1.553248 CGGTTCTGGTACTCATCCCAA 59.447 52.381 0.00 0.00 0.00 4.12
99 100 1.191535 CGGTTCTGGTACTCATCCCA 58.808 55.000 0.00 0.00 0.00 4.37
100 101 1.134788 CACGGTTCTGGTACTCATCCC 60.135 57.143 0.00 0.00 0.00 3.85
101 102 1.739371 GCACGGTTCTGGTACTCATCC 60.739 57.143 0.00 0.00 0.00 3.51
102 103 1.641577 GCACGGTTCTGGTACTCATC 58.358 55.000 0.00 0.00 0.00 2.92
103 104 0.249398 GGCACGGTTCTGGTACTCAT 59.751 55.000 0.00 0.00 0.00 2.90
104 105 1.116536 TGGCACGGTTCTGGTACTCA 61.117 55.000 0.00 0.00 0.00 3.41
105 106 0.249398 ATGGCACGGTTCTGGTACTC 59.751 55.000 0.00 0.00 0.00 2.59
106 107 0.690762 AATGGCACGGTTCTGGTACT 59.309 50.000 0.00 0.00 0.00 2.73
107 108 0.802494 CAATGGCACGGTTCTGGTAC 59.198 55.000 0.00 0.00 0.00 3.34
108 109 0.687920 TCAATGGCACGGTTCTGGTA 59.312 50.000 0.00 0.00 0.00 3.25
109 110 0.038166 ATCAATGGCACGGTTCTGGT 59.962 50.000 0.00 0.00 0.00 4.00
110 111 1.670811 GTATCAATGGCACGGTTCTGG 59.329 52.381 0.00 0.00 0.00 3.86
111 112 2.095853 GTGTATCAATGGCACGGTTCTG 59.904 50.000 0.00 0.00 0.00 3.02
112 113 2.027192 AGTGTATCAATGGCACGGTTCT 60.027 45.455 0.00 0.00 38.10 3.01
113 114 2.351726 GAGTGTATCAATGGCACGGTTC 59.648 50.000 0.00 0.00 38.10 3.62
114 115 2.356135 GAGTGTATCAATGGCACGGTT 58.644 47.619 0.00 0.00 38.10 4.44
115 116 1.739035 CGAGTGTATCAATGGCACGGT 60.739 52.381 0.00 0.00 38.10 4.83
116 117 0.930310 CGAGTGTATCAATGGCACGG 59.070 55.000 0.00 0.00 38.10 4.94
117 118 0.930310 CCGAGTGTATCAATGGCACG 59.070 55.000 0.00 0.00 38.10 5.34
118 119 0.657840 GCCGAGTGTATCAATGGCAC 59.342 55.000 0.00 0.00 42.03 5.01
119 120 0.541392 AGCCGAGTGTATCAATGGCA 59.459 50.000 3.68 0.00 44.83 4.92
120 121 1.221414 GAGCCGAGTGTATCAATGGC 58.779 55.000 0.00 0.00 42.76 4.40
121 122 1.414181 AGGAGCCGAGTGTATCAATGG 59.586 52.381 0.00 0.00 0.00 3.16
122 123 2.898729 AGGAGCCGAGTGTATCAATG 57.101 50.000 0.00 0.00 0.00 2.82
123 124 3.034635 AGAAGGAGCCGAGTGTATCAAT 58.965 45.455 0.00 0.00 0.00 2.57
124 125 2.457598 AGAAGGAGCCGAGTGTATCAA 58.542 47.619 0.00 0.00 0.00 2.57
125 126 2.145397 AGAAGGAGCCGAGTGTATCA 57.855 50.000 0.00 0.00 0.00 2.15
126 127 2.223852 GGAAGAAGGAGCCGAGTGTATC 60.224 54.545 0.00 0.00 0.00 2.24
127 128 1.757699 GGAAGAAGGAGCCGAGTGTAT 59.242 52.381 0.00 0.00 0.00 2.29
128 129 1.183549 GGAAGAAGGAGCCGAGTGTA 58.816 55.000 0.00 0.00 0.00 2.90
129 130 1.545706 GGGAAGAAGGAGCCGAGTGT 61.546 60.000 0.00 0.00 0.00 3.55
130 131 1.219393 GGGAAGAAGGAGCCGAGTG 59.781 63.158 0.00 0.00 0.00 3.51
131 132 1.990614 GGGGAAGAAGGAGCCGAGT 60.991 63.158 0.00 0.00 0.00 4.18
132 133 1.268283 AAGGGGAAGAAGGAGCCGAG 61.268 60.000 0.00 0.00 0.00 4.63
133 134 0.840722 AAAGGGGAAGAAGGAGCCGA 60.841 55.000 0.00 0.00 0.00 5.54
134 135 0.038310 AAAAGGGGAAGAAGGAGCCG 59.962 55.000 0.00 0.00 0.00 5.52
135 136 2.309162 AGTAAAAGGGGAAGAAGGAGCC 59.691 50.000 0.00 0.00 0.00 4.70
136 137 3.722908 AGTAAAAGGGGAAGAAGGAGC 57.277 47.619 0.00 0.00 0.00 4.70
137 138 7.051000 CAGAATAGTAAAAGGGGAAGAAGGAG 58.949 42.308 0.00 0.00 0.00 3.69
138 139 6.733807 TCAGAATAGTAAAAGGGGAAGAAGGA 59.266 38.462 0.00 0.00 0.00 3.36
139 140 6.958767 TCAGAATAGTAAAAGGGGAAGAAGG 58.041 40.000 0.00 0.00 0.00 3.46
140 141 7.852263 TCTCAGAATAGTAAAAGGGGAAGAAG 58.148 38.462 0.00 0.00 0.00 2.85
141 142 7.808279 TCTCAGAATAGTAAAAGGGGAAGAA 57.192 36.000 0.00 0.00 0.00 2.52
142 143 7.458170 AGTTCTCAGAATAGTAAAAGGGGAAGA 59.542 37.037 0.00 0.00 0.00 2.87
143 144 7.550906 CAGTTCTCAGAATAGTAAAAGGGGAAG 59.449 40.741 0.00 0.00 0.00 3.46
144 145 7.394816 CAGTTCTCAGAATAGTAAAAGGGGAA 58.605 38.462 0.00 0.00 0.00 3.97
145 146 6.576442 GCAGTTCTCAGAATAGTAAAAGGGGA 60.576 42.308 0.00 0.00 0.00 4.81
146 147 5.586643 GCAGTTCTCAGAATAGTAAAAGGGG 59.413 44.000 0.00 0.00 0.00 4.79
147 148 6.173339 TGCAGTTCTCAGAATAGTAAAAGGG 58.827 40.000 0.00 0.00 0.00 3.95
148 149 7.856145 ATGCAGTTCTCAGAATAGTAAAAGG 57.144 36.000 0.00 0.00 0.00 3.11
149 150 8.180267 CCAATGCAGTTCTCAGAATAGTAAAAG 58.820 37.037 0.00 0.00 0.00 2.27
150 151 7.665559 ACCAATGCAGTTCTCAGAATAGTAAAA 59.334 33.333 0.00 0.00 0.00 1.52
151 152 7.168219 ACCAATGCAGTTCTCAGAATAGTAAA 58.832 34.615 0.00 0.00 0.00 2.01
152 153 6.711277 ACCAATGCAGTTCTCAGAATAGTAA 58.289 36.000 0.00 0.00 0.00 2.24
153 154 6.070824 TGACCAATGCAGTTCTCAGAATAGTA 60.071 38.462 0.00 0.00 0.00 1.82
154 155 5.171339 ACCAATGCAGTTCTCAGAATAGT 57.829 39.130 0.00 0.00 0.00 2.12
155 156 5.064452 GTGACCAATGCAGTTCTCAGAATAG 59.936 44.000 0.00 0.00 0.00 1.73
156 157 4.937620 GTGACCAATGCAGTTCTCAGAATA 59.062 41.667 0.00 0.00 0.00 1.75
157 158 3.755378 GTGACCAATGCAGTTCTCAGAAT 59.245 43.478 0.00 0.00 0.00 2.40
158 159 3.141398 GTGACCAATGCAGTTCTCAGAA 58.859 45.455 0.00 0.00 0.00 3.02
159 160 2.550855 GGTGACCAATGCAGTTCTCAGA 60.551 50.000 0.00 0.00 0.00 3.27
160 161 1.808945 GGTGACCAATGCAGTTCTCAG 59.191 52.381 0.00 0.00 0.00 3.35
161 162 1.421268 AGGTGACCAATGCAGTTCTCA 59.579 47.619 3.63 0.00 0.00 3.27
162 163 2.079925 GAGGTGACCAATGCAGTTCTC 58.920 52.381 3.63 0.00 0.00 2.87
163 164 1.421268 TGAGGTGACCAATGCAGTTCT 59.579 47.619 3.63 0.00 0.00 3.01
164 165 1.896220 TGAGGTGACCAATGCAGTTC 58.104 50.000 3.63 0.00 0.00 3.01
165 166 2.440409 GATGAGGTGACCAATGCAGTT 58.560 47.619 3.63 0.00 0.00 3.16
166 167 1.340405 GGATGAGGTGACCAATGCAGT 60.340 52.381 3.63 0.00 0.00 4.40
167 168 1.386533 GGATGAGGTGACCAATGCAG 58.613 55.000 3.63 0.00 0.00 4.41
168 169 0.034186 GGGATGAGGTGACCAATGCA 60.034 55.000 3.63 0.00 0.00 3.96
169 170 0.753111 GGGGATGAGGTGACCAATGC 60.753 60.000 3.63 2.07 0.00 3.56
170 171 0.464373 CGGGGATGAGGTGACCAATG 60.464 60.000 3.63 0.00 0.00 2.82
171 172 1.915228 CGGGGATGAGGTGACCAAT 59.085 57.895 3.63 0.00 0.00 3.16
172 173 2.966732 GCGGGGATGAGGTGACCAA 61.967 63.158 3.63 0.00 0.00 3.67
173 174 3.399181 GCGGGGATGAGGTGACCA 61.399 66.667 3.63 0.00 0.00 4.02
174 175 2.478335 TTTGCGGGGATGAGGTGACC 62.478 60.000 0.00 0.00 0.00 4.02
175 176 0.394352 ATTTGCGGGGATGAGGTGAC 60.394 55.000 0.00 0.00 0.00 3.67
176 177 1.208706 TATTTGCGGGGATGAGGTGA 58.791 50.000 0.00 0.00 0.00 4.02
177 178 2.154462 GATATTTGCGGGGATGAGGTG 58.846 52.381 0.00 0.00 0.00 4.00
178 179 1.073923 GGATATTTGCGGGGATGAGGT 59.926 52.381 0.00 0.00 0.00 3.85
179 180 1.614317 GGGATATTTGCGGGGATGAGG 60.614 57.143 0.00 0.00 0.00 3.86
180 181 1.073763 TGGGATATTTGCGGGGATGAG 59.926 52.381 0.00 0.00 0.00 2.90
181 182 1.144691 TGGGATATTTGCGGGGATGA 58.855 50.000 0.00 0.00 0.00 2.92
182 183 1.993956 TTGGGATATTTGCGGGGATG 58.006 50.000 0.00 0.00 0.00 3.51
183 184 2.528564 CATTGGGATATTTGCGGGGAT 58.471 47.619 0.00 0.00 0.00 3.85
184 185 1.993956 CATTGGGATATTTGCGGGGA 58.006 50.000 0.00 0.00 0.00 4.81
185 186 0.318120 GCATTGGGATATTTGCGGGG 59.682 55.000 0.00 0.00 0.00 5.73
186 187 0.318120 GGCATTGGGATATTTGCGGG 59.682 55.000 0.00 0.00 35.95 6.13
187 188 1.331214 AGGCATTGGGATATTTGCGG 58.669 50.000 0.00 0.00 35.95 5.69
188 189 3.125316 CAAAGGCATTGGGATATTTGCG 58.875 45.455 0.00 0.00 35.95 4.85
189 190 4.405116 TCAAAGGCATTGGGATATTTGC 57.595 40.909 2.27 0.00 39.62 3.68
190 191 7.528996 TCTATCAAAGGCATTGGGATATTTG 57.471 36.000 2.27 0.00 39.62 2.32
191 192 7.786464 ACTTCTATCAAAGGCATTGGGATATTT 59.214 33.333 2.27 0.00 39.62 1.40
192 193 7.232127 CACTTCTATCAAAGGCATTGGGATATT 59.768 37.037 2.27 0.00 39.62 1.28
193 194 6.718454 CACTTCTATCAAAGGCATTGGGATAT 59.282 38.462 2.27 0.00 39.62 1.63
194 195 6.064060 CACTTCTATCAAAGGCATTGGGATA 58.936 40.000 2.27 5.84 39.62 2.59
195 196 4.891756 CACTTCTATCAAAGGCATTGGGAT 59.108 41.667 2.27 4.31 39.62 3.85
196 197 4.272489 CACTTCTATCAAAGGCATTGGGA 58.728 43.478 2.27 0.00 39.62 4.37
197 198 3.382546 CCACTTCTATCAAAGGCATTGGG 59.617 47.826 2.27 0.00 39.62 4.12
198 199 3.382546 CCCACTTCTATCAAAGGCATTGG 59.617 47.826 2.27 0.00 39.62 3.16
199 200 3.181483 GCCCACTTCTATCAAAGGCATTG 60.181 47.826 0.00 0.00 38.79 2.82
200 201 3.026694 GCCCACTTCTATCAAAGGCATT 58.973 45.455 0.00 0.00 38.79 3.56
201 202 2.243221 AGCCCACTTCTATCAAAGGCAT 59.757 45.455 0.00 0.00 41.45 4.40
202 203 1.635487 AGCCCACTTCTATCAAAGGCA 59.365 47.619 0.00 0.00 41.45 4.75
203 204 2.019984 CAGCCCACTTCTATCAAAGGC 58.980 52.381 0.00 0.00 39.25 4.35
204 205 2.239654 TCCAGCCCACTTCTATCAAAGG 59.760 50.000 0.00 0.00 0.00 3.11
205 206 3.634397 TCCAGCCCACTTCTATCAAAG 57.366 47.619 0.00 0.00 0.00 2.77
206 207 4.380843 TTTCCAGCCCACTTCTATCAAA 57.619 40.909 0.00 0.00 0.00 2.69
207 208 4.079253 GTTTTCCAGCCCACTTCTATCAA 58.921 43.478 0.00 0.00 0.00 2.57
208 209 3.561313 GGTTTTCCAGCCCACTTCTATCA 60.561 47.826 0.00 0.00 40.31 2.15
209 210 3.017442 GGTTTTCCAGCCCACTTCTATC 58.983 50.000 0.00 0.00 40.31 2.08
210 211 2.618045 CGGTTTTCCAGCCCACTTCTAT 60.618 50.000 0.00 0.00 40.70 1.98
211 212 1.271163 CGGTTTTCCAGCCCACTTCTA 60.271 52.381 0.00 0.00 40.70 2.10
212 213 0.537371 CGGTTTTCCAGCCCACTTCT 60.537 55.000 0.00 0.00 40.70 2.85
213 214 0.822121 ACGGTTTTCCAGCCCACTTC 60.822 55.000 0.00 0.00 40.70 3.01
214 215 0.822121 GACGGTTTTCCAGCCCACTT 60.822 55.000 0.00 0.00 40.70 3.16
215 216 1.228154 GACGGTTTTCCAGCCCACT 60.228 57.895 0.00 0.00 40.70 4.00
216 217 1.228154 AGACGGTTTTCCAGCCCAC 60.228 57.895 0.00 0.00 40.70 4.61
217 218 1.228124 CAGACGGTTTTCCAGCCCA 60.228 57.895 0.00 0.00 40.70 5.36
218 219 1.971695 CCAGACGGTTTTCCAGCCC 60.972 63.158 0.00 0.00 40.70 5.19
219 220 2.626780 GCCAGACGGTTTTCCAGCC 61.627 63.158 0.00 0.00 40.70 4.85
220 221 2.626780 GGCCAGACGGTTTTCCAGC 61.627 63.158 0.00 0.00 40.70 4.85
221 222 1.971695 GGGCCAGACGGTTTTCCAG 60.972 63.158 4.39 0.00 40.70 3.86
222 223 2.114411 GGGCCAGACGGTTTTCCA 59.886 61.111 4.39 0.00 40.70 3.53
223 224 2.675423 GGGGCCAGACGGTTTTCC 60.675 66.667 4.39 0.00 33.28 3.13
224 225 3.053896 CGGGGCCAGACGGTTTTC 61.054 66.667 4.39 0.00 33.28 2.29
225 226 4.653888 CCGGGGCCAGACGGTTTT 62.654 66.667 20.69 0.00 44.85 2.43
332 333 0.471022 TAGATCAGGGGCGCCATGTA 60.471 55.000 30.85 13.03 36.61 2.29
439 440 2.832838 TCAAGGAGATACAAGCCCAGA 58.167 47.619 0.00 0.00 0.00 3.86
718 719 2.625790 CCGGGGACTGTGAAAATTCAAA 59.374 45.455 0.00 0.00 39.21 2.69
821 822 3.193691 CAGCTTTCTCTCTTCCGTTCCTA 59.806 47.826 0.00 0.00 0.00 2.94
822 823 2.028567 CAGCTTTCTCTCTTCCGTTCCT 60.029 50.000 0.00 0.00 0.00 3.36
823 824 2.028930 TCAGCTTTCTCTCTTCCGTTCC 60.029 50.000 0.00 0.00 0.00 3.62
824 825 3.305398 TCAGCTTTCTCTCTTCCGTTC 57.695 47.619 0.00 0.00 0.00 3.95
825 826 3.753294 TTCAGCTTTCTCTCTTCCGTT 57.247 42.857 0.00 0.00 0.00 4.44
826 827 3.394719 GTTTCAGCTTTCTCTCTTCCGT 58.605 45.455 0.00 0.00 0.00 4.69
827 828 2.410053 CGTTTCAGCTTTCTCTCTTCCG 59.590 50.000 0.00 0.00 0.00 4.30
828 829 3.654414 TCGTTTCAGCTTTCTCTCTTCC 58.346 45.455 0.00 0.00 0.00 3.46
829 830 3.122780 GCTCGTTTCAGCTTTCTCTCTTC 59.877 47.826 0.00 0.00 36.38 2.87
830 831 3.063485 GCTCGTTTCAGCTTTCTCTCTT 58.937 45.455 0.00 0.00 36.38 2.85
831 832 2.611722 GGCTCGTTTCAGCTTTCTCTCT 60.612 50.000 0.00 0.00 39.58 3.10
832 833 1.729517 GGCTCGTTTCAGCTTTCTCTC 59.270 52.381 0.00 0.00 39.58 3.20
833 834 1.609320 GGGCTCGTTTCAGCTTTCTCT 60.609 52.381 0.00 0.00 39.58 3.10
834 835 0.799393 GGGCTCGTTTCAGCTTTCTC 59.201 55.000 0.00 0.00 39.58 2.87
835 836 0.108585 TGGGCTCGTTTCAGCTTTCT 59.891 50.000 0.00 0.00 39.58 2.52
836 837 0.238553 GTGGGCTCGTTTCAGCTTTC 59.761 55.000 0.00 0.00 39.58 2.62
837 838 1.507141 CGTGGGCTCGTTTCAGCTTT 61.507 55.000 0.00 0.00 39.58 3.51
838 839 1.961277 CGTGGGCTCGTTTCAGCTT 60.961 57.895 0.00 0.00 39.58 3.74
839 840 2.357517 CGTGGGCTCGTTTCAGCT 60.358 61.111 0.00 0.00 39.58 4.24
840 841 2.775032 TACCGTGGGCTCGTTTCAGC 62.775 60.000 0.00 0.00 38.84 4.26
841 842 0.736325 CTACCGTGGGCTCGTTTCAG 60.736 60.000 0.00 0.00 0.00 3.02
842 843 1.290955 CTACCGTGGGCTCGTTTCA 59.709 57.895 0.00 0.00 0.00 2.69
843 844 2.098831 GCTACCGTGGGCTCGTTTC 61.099 63.158 0.00 0.00 0.00 2.78
844 845 2.047560 GCTACCGTGGGCTCGTTT 60.048 61.111 0.00 0.00 0.00 3.60
845 846 4.078516 GGCTACCGTGGGCTCGTT 62.079 66.667 0.76 0.00 0.00 3.85
847 848 4.514577 CTGGCTACCGTGGGCTCG 62.515 72.222 9.87 0.00 0.00 5.03
848 849 4.840005 GCTGGCTACCGTGGGCTC 62.840 72.222 9.87 0.00 0.00 4.70
851 852 3.976701 CTTGGCTGGCTACCGTGGG 62.977 68.421 2.00 0.00 0.00 4.61
852 853 2.436646 CTTGGCTGGCTACCGTGG 60.437 66.667 2.00 0.00 0.00 4.94
853 854 3.127533 GCTTGGCTGGCTACCGTG 61.128 66.667 2.00 0.00 0.00 4.94
854 855 4.410400 GGCTTGGCTGGCTACCGT 62.410 66.667 2.00 0.00 0.00 4.83
856 857 4.047125 TGGGCTTGGCTGGCTACC 62.047 66.667 2.00 1.02 0.00 3.18
857 858 2.276309 ATCTGGGCTTGGCTGGCTAC 62.276 60.000 2.00 0.00 0.00 3.58
858 859 0.694105 TATCTGGGCTTGGCTGGCTA 60.694 55.000 2.00 0.00 0.00 3.93
859 860 1.574526 TTATCTGGGCTTGGCTGGCT 61.575 55.000 2.00 0.00 0.00 4.75
860 861 1.076777 TTATCTGGGCTTGGCTGGC 60.077 57.895 0.00 0.00 0.00 4.85
861 862 1.097547 CGTTATCTGGGCTTGGCTGG 61.098 60.000 0.00 0.00 0.00 4.85
862 863 1.718757 GCGTTATCTGGGCTTGGCTG 61.719 60.000 0.00 0.00 0.00 4.85
863 864 1.452108 GCGTTATCTGGGCTTGGCT 60.452 57.895 0.00 0.00 0.00 4.75
864 865 1.312371 TTGCGTTATCTGGGCTTGGC 61.312 55.000 0.00 0.00 0.00 4.52
865 866 0.734889 CTTGCGTTATCTGGGCTTGG 59.265 55.000 0.00 0.00 0.00 3.61
866 867 0.099436 GCTTGCGTTATCTGGGCTTG 59.901 55.000 0.00 0.00 0.00 4.01
867 868 0.035056 AGCTTGCGTTATCTGGGCTT 60.035 50.000 0.00 0.00 0.00 4.35
868 869 0.830648 TAGCTTGCGTTATCTGGGCT 59.169 50.000 0.00 0.00 0.00 5.19
869 870 1.221414 CTAGCTTGCGTTATCTGGGC 58.779 55.000 0.00 0.00 0.00 5.36
870 871 1.871080 CCTAGCTTGCGTTATCTGGG 58.129 55.000 0.00 0.00 0.00 4.45
871 872 1.221414 GCCTAGCTTGCGTTATCTGG 58.779 55.000 0.00 0.00 0.00 3.86
872 873 1.202580 AGGCCTAGCTTGCGTTATCTG 60.203 52.381 1.29 0.00 0.00 2.90
873 874 1.123928 AGGCCTAGCTTGCGTTATCT 58.876 50.000 1.29 0.00 0.00 1.98
874 875 1.954927 AAGGCCTAGCTTGCGTTATC 58.045 50.000 5.16 0.00 35.28 1.75
875 876 2.289565 GAAAGGCCTAGCTTGCGTTAT 58.710 47.619 5.16 6.89 35.93 1.89
1166 1171 2.892425 GATCTGAACGGCGCCCTG 60.892 66.667 23.46 10.83 0.00 4.45
1336 1341 7.796054 AGCTACTACAATTCTGGTTGTCATAT 58.204 34.615 0.00 0.00 41.18 1.78
1356 1361 5.484715 TCACCATTACCACAACTTAGCTAC 58.515 41.667 0.00 0.00 0.00 3.58
1393 1405 2.286025 AGTTAAACACCTTCGCACGAAC 59.714 45.455 0.49 0.00 0.00 3.95
1417 1429 9.343539 AGCTTGATAGGAGTACCAATTATTTTC 57.656 33.333 0.00 0.00 38.94 2.29
1448 1460 7.875041 TGCCATCTTTGCTAGACTAGATATTTC 59.125 37.037 13.91 0.00 35.19 2.17
1454 1466 5.420725 TTTGCCATCTTTGCTAGACTAGA 57.579 39.130 13.91 0.00 35.19 2.43
1455 1467 6.018098 CAGATTTGCCATCTTTGCTAGACTAG 60.018 42.308 5.03 5.03 35.19 2.57
1456 1468 5.819379 CAGATTTGCCATCTTTGCTAGACTA 59.181 40.000 0.00 0.00 35.19 2.59
1457 1469 4.639310 CAGATTTGCCATCTTTGCTAGACT 59.361 41.667 0.00 0.00 35.19 3.24
1458 1470 4.637534 TCAGATTTGCCATCTTTGCTAGAC 59.362 41.667 0.00 0.00 35.19 2.59
1490 1502 5.999205 AAATGAACACTTCCCATTGCATA 57.001 34.783 0.00 0.00 31.62 3.14
1492 1504 4.686191 AAAATGAACACTTCCCATTGCA 57.314 36.364 0.00 0.00 31.62 4.08
1557 1569 2.602257 TATGATCCACGCCAACTGAG 57.398 50.000 0.00 0.00 0.00 3.35
1565 1577 1.956477 AGGCCAAAATATGATCCACGC 59.044 47.619 5.01 0.00 0.00 5.34
1663 1831 1.464023 GCACACACGATGCACATGTAC 60.464 52.381 0.00 0.00 42.88 2.90
1693 1861 6.925165 AGGAAAAGAAAGCATAAACACACATG 59.075 34.615 0.00 0.00 0.00 3.21
1694 1862 7.014615 AGAGGAAAAGAAAGCATAAACACACAT 59.985 33.333 0.00 0.00 0.00 3.21
1695 1863 6.321181 AGAGGAAAAGAAAGCATAAACACACA 59.679 34.615 0.00 0.00 0.00 3.72
1696 1864 6.739112 AGAGGAAAAGAAAGCATAAACACAC 58.261 36.000 0.00 0.00 0.00 3.82
1697 1865 6.545666 TGAGAGGAAAAGAAAGCATAAACACA 59.454 34.615 0.00 0.00 0.00 3.72
1698 1866 6.970484 TGAGAGGAAAAGAAAGCATAAACAC 58.030 36.000 0.00 0.00 0.00 3.32
1699 1867 6.207417 CCTGAGAGGAAAAGAAAGCATAAACA 59.793 38.462 0.00 0.00 37.67 2.83
1700 1868 6.349694 CCCTGAGAGGAAAAGAAAGCATAAAC 60.350 42.308 0.00 0.00 37.67 2.01
1701 1869 5.711976 CCCTGAGAGGAAAAGAAAGCATAAA 59.288 40.000 0.00 0.00 37.67 1.40
1702 1870 5.222130 ACCCTGAGAGGAAAAGAAAGCATAA 60.222 40.000 0.00 0.00 37.67 1.90
1703 1871 4.289672 ACCCTGAGAGGAAAAGAAAGCATA 59.710 41.667 0.00 0.00 37.67 3.14
1704 1872 3.075134 ACCCTGAGAGGAAAAGAAAGCAT 59.925 43.478 0.00 0.00 37.67 3.79
1825 2005 4.095782 GGAGCAAACAGGTAAATCGCATAA 59.904 41.667 0.00 0.00 0.00 1.90
1826 2006 3.625764 GGAGCAAACAGGTAAATCGCATA 59.374 43.478 0.00 0.00 0.00 3.14
1869 2049 9.394477 GAATTGTTATGGACACTTGTTAACTTC 57.606 33.333 7.22 0.00 38.18 3.01
1899 2079 2.510613 TGAACATCTTCGGTTTTCCCC 58.489 47.619 0.00 0.00 36.42 4.81
1907 2087 3.837213 AACAAGCATGAACATCTTCGG 57.163 42.857 0.00 0.00 0.00 4.30
1911 2091 9.545105 TTCAAAATTAAACAAGCATGAACATCT 57.455 25.926 0.00 0.00 0.00 2.90
1935 2115 6.705381 AGATTCAGCAAGTCATAGCTACATTC 59.295 38.462 0.00 0.00 39.50 2.67
2026 2206 3.695830 AAATACAGTGGGAGCGAAGAA 57.304 42.857 0.00 0.00 0.00 2.52
2087 2267 2.646175 GCAGCGGAGGGTAGACACA 61.646 63.158 0.00 0.00 0.00 3.72
2197 2377 9.098355 CTTAGCTAGCATTGTAACTGATTAACA 57.902 33.333 18.83 0.00 0.00 2.41
2363 2543 3.450457 AGCTCTAACTGACAAGATCTGGG 59.550 47.826 1.23 0.00 0.00 4.45
2550 2730 1.021968 GGCAATACCTAAAGGCACCG 58.978 55.000 0.00 0.00 39.32 4.94
2581 2761 7.908827 AAAACAGCAAATGCATGATTTCATA 57.091 28.000 0.00 0.00 45.16 2.15
2620 2800 7.444792 AGTTAGCTTCATCCTGATCATGAATTC 59.555 37.037 9.97 0.00 39.10 2.17
2634 2814 6.568869 ACATACACTCTGAGTTAGCTTCATC 58.431 40.000 7.77 0.00 0.00 2.92
2653 2833 7.973944 GGTTCACCAGGATTGAATTTAACATAC 59.026 37.037 0.00 0.00 35.47 2.39
2720 2921 8.050778 ACATACTTGACACACTGAAAAGAAAA 57.949 30.769 0.00 0.00 0.00 2.29
2724 2925 7.017645 GCATACATACTTGACACACTGAAAAG 58.982 38.462 0.00 0.00 0.00 2.27
2761 2962 1.250328 TCCTCAAAGCTGCATGTTGG 58.750 50.000 1.02 7.89 0.00 3.77
2862 3063 6.461110 AAGAACATGAGCAATCTATTTGGG 57.539 37.500 0.00 0.00 35.75 4.12
2881 3082 6.957631 TGAGGCATCCTACAAAGATAAAGAA 58.042 36.000 0.00 0.00 31.76 2.52
2908 3109 1.096967 CCATCGCACTATTGGCAGCA 61.097 55.000 0.00 0.00 0.00 4.41
2935 3136 6.183360 GCACCTTTTCTGAATCTAGACCAATC 60.183 42.308 0.00 0.00 0.00 2.67
2974 3175 0.099968 CCACATCCTCATTTGCAGCG 59.900 55.000 0.00 0.00 0.00 5.18
3050 3251 4.586306 AGGAAACAAATAACCTCCCGAT 57.414 40.909 0.00 0.00 0.00 4.18
3053 3254 4.948004 CCAGTAGGAAACAAATAACCTCCC 59.052 45.833 0.00 0.00 36.89 4.30
3054 3255 4.948004 CCCAGTAGGAAACAAATAACCTCC 59.052 45.833 0.00 0.00 38.24 4.30
3252 3464 2.362077 ACCAGGTTTCACACTTCATTGC 59.638 45.455 0.00 0.00 0.00 3.56
3286 3498 5.163963 GCAGTTTCAGTTTTCAAAACCACTG 60.164 40.000 19.02 19.02 38.42 3.66
3349 3562 6.375377 TGAAGATGTACAAAACGGTTTATGC 58.625 36.000 6.53 0.00 0.00 3.14
3401 3615 3.081061 GTTGTCTGACATATTGCCACCA 58.919 45.455 11.86 0.00 0.00 4.17
3559 3773 7.974675 ACAGTATACACAATGTTAGAATGCAC 58.025 34.615 5.50 0.00 0.00 4.57
3830 4078 6.332976 AGATTACTGGGATTCTTGGTGATT 57.667 37.500 0.00 0.00 0.00 2.57
3933 4181 2.512885 GCTGCGACATGAATTCAAGTG 58.487 47.619 20.23 13.51 0.00 3.16
3944 4192 4.617253 TTGTATAATAGGGCTGCGACAT 57.383 40.909 0.00 0.00 0.00 3.06
3973 4221 1.961277 CCACCAAGTCAGTCACGCC 60.961 63.158 0.00 0.00 0.00 5.68
3975 4223 0.673985 TCTCCACCAAGTCAGTCACG 59.326 55.000 0.00 0.00 0.00 4.35
3982 4234 2.640316 ACCTGTTTCTCCACCAAGTC 57.360 50.000 0.00 0.00 0.00 3.01
4074 4326 3.560357 ATTTTTACCTTTCCTGGGCCT 57.440 42.857 4.53 0.00 0.00 5.19
4077 4329 7.776618 AGAAACTATTTTTACCTTTCCTGGG 57.223 36.000 0.00 0.00 0.00 4.45
4105 4357 8.571336 AGACTTGTTATCCAGTCAGAAATTTTG 58.429 33.333 7.54 0.00 34.06 2.44
4106 4358 8.697507 AGACTTGTTATCCAGTCAGAAATTTT 57.302 30.769 7.54 0.00 34.06 1.82
4107 4359 8.697507 AAGACTTGTTATCCAGTCAGAAATTT 57.302 30.769 7.54 0.00 34.06 1.82
4128 4380 9.979578 ATAAATATCATCACAGACTCTGAAGAC 57.020 33.333 13.25 0.00 35.18 3.01
4253 4509 8.237811 ACTTCATTATTTGCCCCTATAAACAG 57.762 34.615 0.00 0.00 0.00 3.16
4256 4512 9.362151 CCTAACTTCATTATTTGCCCCTATAAA 57.638 33.333 0.00 0.00 0.00 1.40
4303 4571 5.420409 CCCTTTAGTACATTCAGGAGTGTC 58.580 45.833 0.40 0.00 33.24 3.67
4322 4590 3.241530 TGGTGCTCTCGTGCCCTT 61.242 61.111 0.00 0.00 0.00 3.95
4394 4664 4.514441 CCTAGCTCTAGCCAATGAAACATG 59.486 45.833 0.00 0.00 43.38 3.21
4488 4758 8.546083 AACCATGGGCATAAAATTACTGATAA 57.454 30.769 18.09 0.00 0.00 1.75
4504 4774 0.036732 TCAGACAGTGAACCATGGGC 59.963 55.000 18.09 8.37 29.64 5.36
4600 4870 4.816385 GCTTCAATCGGAGAATATGGTTGA 59.184 41.667 0.00 0.00 43.58 3.18
4601 4871 4.576053 TGCTTCAATCGGAGAATATGGTTG 59.424 41.667 0.00 0.00 43.58 3.77
4633 4903 0.742281 CTCATGCTCGGTGACCCAAG 60.742 60.000 0.00 0.00 0.00 3.61
4715 4985 4.593956 AGTGATCCCAATTGAAGTCTTCC 58.406 43.478 7.12 0.00 0.00 3.46
4716 4986 6.207417 TGAAAGTGATCCCAATTGAAGTCTTC 59.793 38.462 7.12 5.58 30.25 2.87
4993 5294 0.814457 TTGGCAAGAGCACAACGTTT 59.186 45.000 0.00 0.00 44.61 3.60
5011 5312 1.266178 CCTCCGCCCCATTTTTCTTT 58.734 50.000 0.00 0.00 0.00 2.52
5018 5319 1.076044 CAATTCCCTCCGCCCCATT 60.076 57.895 0.00 0.00 0.00 3.16
5046 5347 4.353788 TGGCATGGATTAGGCTAATAGGTT 59.646 41.667 19.27 0.00 36.09 3.50
5337 5638 1.073199 CAAAGGAGGGTCGCAACCT 59.927 57.895 0.00 0.00 45.66 3.50
5345 5646 0.251341 GTGGATGTGCAAAGGAGGGT 60.251 55.000 0.00 0.00 0.00 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.