Multiple sequence alignment - TraesCS4B01G186900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G186900 chr4B 100.000 4410 0 0 1 4410 406894460 406890051 0.000000e+00 8144.0
1 TraesCS4B01G186900 chr4D 93.637 4369 162 54 1 4292 327440845 327436516 0.000000e+00 6421.0
2 TraesCS4B01G186900 chr4A 92.754 4278 184 51 1 4222 143432825 143437032 0.000000e+00 6067.0
3 TraesCS4B01G186900 chr5D 87.864 206 16 7 1434 1637 378341989 378341791 2.650000e-57 233.0
4 TraesCS4B01G186900 chr2B 83.920 199 19 8 1649 1847 137262170 137261985 1.260000e-40 178.0
5 TraesCS4B01G186900 chr5A 97.778 45 1 0 1823 1867 564438220 564438176 1.320000e-10 78.7
6 TraesCS4B01G186900 chr7B 85.507 69 8 2 4061 4127 504832848 504832780 2.200000e-08 71.3
7 TraesCS4B01G186900 chr7D 84.058 69 9 2 4061 4127 479081972 479081904 1.020000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G186900 chr4B 406890051 406894460 4409 True 8144 8144 100.000 1 4410 1 chr4B.!!$R1 4409
1 TraesCS4B01G186900 chr4D 327436516 327440845 4329 True 6421 6421 93.637 1 4292 1 chr4D.!!$R1 4291
2 TraesCS4B01G186900 chr4A 143432825 143437032 4207 False 6067 6067 92.754 1 4222 1 chr4A.!!$F1 4221

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
283 286 1.554583 GCTCCTCCTTTCTTCCCCGT 61.555 60.000 0.00 0.00 0.00 5.28 F
361 364 2.100197 GGCCTTTGTACCCATCTTTCC 58.900 52.381 0.00 0.00 0.00 3.13 F
1330 1351 2.095161 CAGAACTCGCTTCTTCGGTAGT 60.095 50.000 0.00 0.00 37.08 2.73 F
2008 2042 0.032615 AGATGGAGCTCCTCGTCCTT 60.033 55.000 32.28 10.91 36.82 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1193 1213 0.031857 CCTCCTGCATCGAGCTACTG 59.968 60.0 5.59 0.0 45.94 2.74 R
1335 1356 0.321034 AATTCGCAGCAGAGTCAGCA 60.321 50.0 10.41 0.0 0.00 4.41 R
2487 2538 0.106149 GGAAGTCCTGAACGGTGTGT 59.894 55.0 0.00 0.0 0.00 3.72 R
3817 3923 0.253044 AAGCATGTATGGGCACGTCT 59.747 50.0 0.00 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
198 201 2.512745 ACAGGCACACGAACGCAA 60.513 55.556 0.00 0.00 0.00 4.85
279 282 1.815613 GCTTTGCTCCTCCTTTCTTCC 59.184 52.381 0.00 0.00 0.00 3.46
283 286 1.554583 GCTCCTCCTTTCTTCCCCGT 61.555 60.000 0.00 0.00 0.00 5.28
361 364 2.100197 GGCCTTTGTACCCATCTTTCC 58.900 52.381 0.00 0.00 0.00 3.13
1115 1135 2.995939 CGCTTCTCAAGTGAGTGCATTA 59.004 45.455 20.14 0.00 41.49 1.90
1119 1139 5.675575 GCTTCTCAAGTGAGTGCATTATTGG 60.676 44.000 17.47 0.00 42.60 3.16
1125 1145 4.265073 AGTGAGTGCATTATTGGTTCTCC 58.735 43.478 0.00 0.00 0.00 3.71
1330 1351 2.095161 CAGAACTCGCTTCTTCGGTAGT 60.095 50.000 0.00 0.00 37.08 2.73
1335 1356 3.442977 ACTCGCTTCTTCGGTAGTAATGT 59.557 43.478 0.00 0.00 0.00 2.71
1346 1367 3.190874 GGTAGTAATGTGCTGACTCTGC 58.809 50.000 1.04 1.04 0.00 4.26
1429 1450 4.743644 CACAGGTTAGCGCCTAAATACTAC 59.256 45.833 2.29 0.00 37.04 2.73
1430 1451 4.648307 ACAGGTTAGCGCCTAAATACTACT 59.352 41.667 2.29 0.00 37.04 2.57
1431 1452 5.221130 CAGGTTAGCGCCTAAATACTACTC 58.779 45.833 2.29 0.00 37.04 2.59
1575 1600 3.471680 ACTCTGAAGACCTTTTCACTGC 58.528 45.455 0.00 0.00 33.71 4.40
1586 1611 2.420628 TTTCACTGCCTGAATTTGCG 57.579 45.000 0.00 0.00 38.74 4.85
1627 1655 9.342308 ACAAACAATATGGACCTGAATATACTG 57.658 33.333 0.00 0.00 0.00 2.74
1811 1845 2.460669 TCTGCTCTGCATTACTCAGGA 58.539 47.619 0.00 0.00 38.13 3.86
1816 1850 3.388308 CTCTGCATTACTCAGGATTCCG 58.612 50.000 0.00 0.00 32.63 4.30
1900 1934 1.388065 TTTTCACGGGCAACAGGGTG 61.388 55.000 0.00 0.00 36.16 4.61
1939 1973 2.808543 GCCACTTCGAATTGTTCTCACT 59.191 45.455 13.66 0.00 0.00 3.41
1942 1976 4.692625 CCACTTCGAATTGTTCTCACTGAT 59.307 41.667 13.66 0.00 0.00 2.90
1991 2025 1.289160 CCCCTTGTCCTCCATGAAGA 58.711 55.000 0.00 0.00 0.00 2.87
2008 2042 0.032615 AGATGGAGCTCCTCGTCCTT 60.033 55.000 32.28 10.91 36.82 3.36
2011 2045 0.324738 TGGAGCTCCTCGTCCTTGAT 60.325 55.000 32.28 0.00 36.82 2.57
2200 2234 3.683802 CTGGATCAGAAGCAGGAAGTTT 58.316 45.455 0.00 0.00 32.44 2.66
2406 2457 0.329596 ACAAGAAGCATCACCCTCCC 59.670 55.000 0.00 0.00 0.00 4.30
2487 2538 0.250234 AGCTCGCTGACTTTGGCATA 59.750 50.000 0.00 0.00 0.00 3.14
2556 2607 3.849953 CGCGGCGTAAGAACCTGC 61.850 66.667 15.36 0.00 43.02 4.85
2578 2630 3.368948 CCCTGCCTCTTTCTACAGAGTTC 60.369 52.174 0.00 0.00 39.04 3.01
2778 2850 0.407918 AAATCATCGGGGTGGTGGTT 59.592 50.000 0.00 0.00 0.00 3.67
2784 2856 4.678743 GGGGTGGTGGTTGGGAGC 62.679 72.222 0.00 0.00 0.00 4.70
2831 2903 0.947180 GCGACGCAGAAGGTGGTTAA 60.947 55.000 16.42 0.00 0.00 2.01
2835 2907 2.614983 GACGCAGAAGGTGGTTAAAACA 59.385 45.455 0.00 0.00 0.00 2.83
2850 2922 6.970043 TGGTTAAAACATCTGAAAACACTTCG 59.030 34.615 0.00 0.00 0.00 3.79
2886 2958 3.122613 CGTCTCTGTCTCAAGAACAATGC 59.877 47.826 0.00 0.00 0.00 3.56
2912 2984 3.957747 TCGTTCGTAAACATAACAGCG 57.042 42.857 0.00 0.00 34.93 5.18
2943 3015 3.560251 AGGCGCTGGTGGTGAAGT 61.560 61.111 7.64 0.00 0.00 3.01
2951 3023 0.682532 TGGTGGTGAAGTTGCAGCAA 60.683 50.000 2.83 2.83 46.43 3.91
2954 3026 1.610522 GTGGTGAAGTTGCAGCAAGAT 59.389 47.619 8.49 0.00 46.43 2.40
2975 3047 2.924101 TACAAGTTCCCCGGCCGT 60.924 61.111 26.12 4.09 0.00 5.68
3088 3160 0.322975 CCTCCTCAAGGTGGTCAGTG 59.677 60.000 8.69 0.00 42.41 3.66
3211 3283 2.044650 CAGCCACAGGACCATGGG 60.045 66.667 18.09 0.00 36.41 4.00
3219 3291 4.746309 GGACCATGGGCTGCTGCA 62.746 66.667 19.55 0.88 41.91 4.41
3220 3292 3.446570 GACCATGGGCTGCTGCAC 61.447 66.667 18.09 14.87 44.33 4.57
3223 3295 3.449227 CATGGGCTGCTGCACCAG 61.449 66.667 23.03 4.55 43.18 4.00
3360 3435 2.595463 GCTGCAGTTCAGTGGGCA 60.595 61.111 16.64 0.00 44.66 5.36
3477 3563 1.002033 ACACGTACTCACAGGTCGTTC 60.002 52.381 0.00 0.00 32.47 3.95
3685 3781 3.037549 TGTGTCAATTTTTCCCAAGGCT 58.962 40.909 0.00 0.00 0.00 4.58
3713 3819 6.474140 TGTGAGTTGTAACCTTTCTCTGTA 57.526 37.500 0.00 0.00 0.00 2.74
3715 3821 6.127281 TGTGAGTTGTAACCTTTCTCTGTACA 60.127 38.462 0.00 0.00 0.00 2.90
3745 3851 8.137437 AGGACAGTGAAATGAAATAAACTTGTG 58.863 33.333 0.00 0.00 0.00 3.33
3817 3923 2.404923 TCTTGGAAACGACCACAACA 57.595 45.000 0.00 0.00 39.85 3.33
3826 3932 2.203153 ACCACAACAGACGTGCCC 60.203 61.111 0.00 0.00 32.85 5.36
3831 3937 0.394938 ACAACAGACGTGCCCATACA 59.605 50.000 0.00 0.00 0.00 2.29
3835 3941 0.462581 CAGACGTGCCCATACATGCT 60.463 55.000 0.00 0.00 0.00 3.79
3923 4031 2.175202 CCCTAGCAGTAGAGGCATAGG 58.825 57.143 0.00 0.00 34.60 2.57
3984 4092 0.629596 AGGGTCTCGTAGGGTCATCA 59.370 55.000 0.00 0.00 0.00 3.07
4012 4120 0.528924 TGACAGTATCGGAACCCACG 59.471 55.000 0.00 0.00 0.00 4.94
4314 4423 9.703892 TCACAATTAATTATGTTCCCAAAACTG 57.296 29.630 6.37 0.00 0.00 3.16
4315 4424 9.703892 CACAATTAATTATGTTCCCAAAACTGA 57.296 29.630 0.00 0.00 0.00 3.41
4322 4431 9.625747 AATTATGTTCCCAAAACTGAAAAACAT 57.374 25.926 0.00 0.00 38.81 2.71
4323 4432 9.625747 ATTATGTTCCCAAAACTGAAAAACATT 57.374 25.926 0.00 0.00 37.18 2.71
4324 4433 6.976636 TGTTCCCAAAACTGAAAAACATTC 57.023 33.333 0.00 0.00 0.00 2.67
4325 4434 6.467677 TGTTCCCAAAACTGAAAAACATTCA 58.532 32.000 0.00 0.00 0.00 2.57
4326 4435 7.108847 TGTTCCCAAAACTGAAAAACATTCAT 58.891 30.769 0.00 0.00 0.00 2.57
4327 4436 7.065563 TGTTCCCAAAACTGAAAAACATTCATG 59.934 33.333 0.00 0.00 0.00 3.07
4328 4437 6.882656 TCCCAAAACTGAAAAACATTCATGA 58.117 32.000 0.00 0.00 0.00 3.07
4329 4438 7.334090 TCCCAAAACTGAAAAACATTCATGAA 58.666 30.769 11.26 11.26 0.00 2.57
4330 4439 7.992033 TCCCAAAACTGAAAAACATTCATGAAT 59.008 29.630 15.36 15.36 0.00 2.57
4331 4440 8.623030 CCCAAAACTGAAAAACATTCATGAATT 58.377 29.630 18.41 4.53 0.00 2.17
4391 4500 9.855021 CAGGTAAGTAAAACATGGAATAAAAGG 57.145 33.333 0.00 0.00 0.00 3.11
4392 4501 9.596308 AGGTAAGTAAAACATGGAATAAAAGGT 57.404 29.630 0.00 0.00 0.00 3.50
4397 4506 9.802039 AGTAAAACATGGAATAAAAGGTAGACA 57.198 29.630 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.322906 ACTGAACGAATGATGAATTGTTTAGA 57.677 30.769 0.13 0.00 32.94 2.10
28 29 9.820229 GTTACTGAACGAATGATGAATTGTTTA 57.180 29.630 0.00 0.00 0.00 2.01
29 30 7.807907 GGTTACTGAACGAATGATGAATTGTTT 59.192 33.333 0.00 0.00 36.32 2.83
31 32 6.402118 CGGTTACTGAACGAATGATGAATTGT 60.402 38.462 0.00 0.00 36.32 2.71
198 201 1.302752 TCATGCTCCTGCTTTGCGT 60.303 52.632 0.00 0.00 40.48 5.24
220 223 5.359194 AGCGAAGAATTTATTCTCCTCCA 57.641 39.130 5.51 0.00 45.83 3.86
361 364 2.202892 GCGTAGGCTTTCGGGGAG 60.203 66.667 12.21 0.00 35.83 4.30
464 475 4.183858 CGTGGTGGTGGTGGTGGT 62.184 66.667 0.00 0.00 0.00 4.16
465 476 2.809307 TACGTGGTGGTGGTGGTGG 61.809 63.158 0.00 0.00 0.00 4.61
466 477 1.595929 GTACGTGGTGGTGGTGGTG 60.596 63.158 0.00 0.00 0.00 4.17
673 690 0.542938 GCTTTGGGCCTTTTCCTCCT 60.543 55.000 4.53 0.00 34.27 3.69
819 836 2.787866 CTTCTCTCCCCCTCCCCA 59.212 66.667 0.00 0.00 0.00 4.96
939 959 2.751991 ACCTGAGGTGAGTGAGGTG 58.248 57.895 1.77 0.00 37.44 4.00
1125 1145 1.901591 AAGCCTGACACCATTCTGTG 58.098 50.000 0.00 0.00 42.05 3.66
1193 1213 0.031857 CCTCCTGCATCGAGCTACTG 59.968 60.000 5.59 0.00 45.94 2.74
1330 1351 1.730501 GCAGCAGAGTCAGCACATTA 58.269 50.000 10.41 0.00 0.00 1.90
1335 1356 0.321034 AATTCGCAGCAGAGTCAGCA 60.321 50.000 10.41 0.00 0.00 4.41
1575 1600 4.321745 CGACTTCAAAATCGCAAATTCAGG 59.678 41.667 0.00 0.00 0.00 3.86
1586 1611 3.613563 TGTTTGTCGCGACTTCAAAATC 58.386 40.909 36.27 21.34 33.80 2.17
1599 1627 5.818136 ATTCAGGTCCATATTGTTTGTCG 57.182 39.130 0.00 0.00 0.00 4.35
1600 1628 9.561069 AGTATATTCAGGTCCATATTGTTTGTC 57.439 33.333 0.00 0.00 0.00 3.18
1627 1655 3.234386 GGTTTTCAACAGCATTACGAGC 58.766 45.455 0.00 0.00 0.00 5.03
1677 1705 3.531538 GCTACTGCACTGCCTAATGTTA 58.468 45.455 0.00 0.00 39.41 2.41
1757 1788 8.319146 TCAGTAAAACAGGAAGGAACCTATAAG 58.681 37.037 0.00 0.00 38.32 1.73
1779 1813 4.645535 TGCAGAGCAGAAATTTAGTCAGT 58.354 39.130 0.00 0.00 33.32 3.41
1811 1845 3.921677 TCGTCTTTAACTGAAGCGGAAT 58.078 40.909 0.00 0.00 31.67 3.01
1816 1850 3.060602 ACTGCTCGTCTTTAACTGAAGC 58.939 45.455 0.00 0.00 0.00 3.86
1900 1934 0.520847 GCTGCTTGTTCTCTGCTTCC 59.479 55.000 0.00 0.00 0.00 3.46
1939 1973 1.514678 GCTGGTTGTTGACGGCATCA 61.515 55.000 0.00 0.00 34.65 3.07
1942 1976 2.186160 CAGCTGGTTGTTGACGGCA 61.186 57.895 5.57 0.00 32.51 5.69
1991 2025 0.324738 TCAAGGACGAGGAGCTCCAT 60.325 55.000 33.90 19.13 38.89 3.41
2008 2042 3.561429 GCGTTGAAGTCGCCATCA 58.439 55.556 0.00 0.00 46.61 3.07
2098 2132 2.524394 ACCTCACCGGACAGCAGT 60.524 61.111 9.46 0.00 36.31 4.40
2487 2538 0.106149 GGAAGTCCTGAACGGTGTGT 59.894 55.000 0.00 0.00 0.00 3.72
2556 2607 2.183679 ACTCTGTAGAAAGAGGCAGGG 58.816 52.381 6.21 0.00 46.73 4.45
2784 2856 1.069636 GCGTTCAAGGAGAAGCAGTTG 60.070 52.381 0.00 0.00 36.78 3.16
2814 2886 2.614983 TGTTTTAACCACCTTCTGCGTC 59.385 45.455 0.00 0.00 0.00 5.19
2850 2922 1.966422 GAGACGTCTCTGTCCGAAAC 58.034 55.000 33.28 7.99 39.77 2.78
2877 2949 1.732259 GAACGATCCACGCATTGTTCT 59.268 47.619 12.42 0.00 46.94 3.01
2943 3015 1.814394 CTTGTAGGCATCTTGCTGCAA 59.186 47.619 15.16 15.16 44.28 4.08
2951 3023 0.541863 CGGGGAACTTGTAGGCATCT 59.458 55.000 0.00 0.00 0.00 2.90
2954 3026 3.074281 CCGGGGAACTTGTAGGCA 58.926 61.111 0.00 0.00 0.00 4.75
2975 3047 3.270027 CTGCACCTTGAATTCCACGATA 58.730 45.455 2.27 0.00 0.00 2.92
3088 3160 1.318576 CAAACACCTGGTGGGAGAAC 58.681 55.000 29.05 0.00 37.94 3.01
3137 3209 6.013379 ACAAAAGTAAGAGTGAGATGATGGGA 60.013 38.462 0.00 0.00 0.00 4.37
3219 3291 4.320456 CGTGGAGGTGCAGCTGGT 62.320 66.667 25.60 0.00 0.00 4.00
3220 3292 3.320879 ATCGTGGAGGTGCAGCTGG 62.321 63.158 25.60 9.69 0.00 4.85
3221 3293 2.104859 CATCGTGGAGGTGCAGCTG 61.105 63.158 25.60 10.11 0.00 4.24
3222 3294 2.267006 CATCGTGGAGGTGCAGCT 59.733 61.111 20.31 20.31 0.00 4.24
3280 3355 2.897350 GGCTCGCTATGGTGGTGC 60.897 66.667 0.00 0.00 0.00 5.01
3470 3556 0.584876 CCCACGAAACAAGAACGACC 59.415 55.000 0.00 0.00 0.00 4.79
3477 3563 0.753848 ACCCCAACCCACGAAACAAG 60.754 55.000 0.00 0.00 0.00 3.16
3685 3781 5.741011 AGAAAGGTTACAACTCACAAGTGA 58.259 37.500 2.56 2.56 35.36 3.41
3693 3799 6.278363 TGTGTACAGAGAAAGGTTACAACTC 58.722 40.000 0.00 0.00 0.00 3.01
3713 3819 5.913137 TTTCATTTCACTGTCCTTTGTGT 57.087 34.783 0.00 0.00 35.82 3.72
3715 3821 8.695456 AGTTTATTTCATTTCACTGTCCTTTGT 58.305 29.630 0.00 0.00 0.00 2.83
3745 3851 2.251893 CTCCGTACGCTGAGAAAGTTC 58.748 52.381 10.49 0.00 0.00 3.01
3783 3889 7.283580 TCGTTTCCAAGAAAGATTTCAGGTTTA 59.716 33.333 7.97 0.00 39.61 2.01
3784 3890 6.096282 TCGTTTCCAAGAAAGATTTCAGGTTT 59.904 34.615 7.97 0.00 39.61 3.27
3785 3891 5.592688 TCGTTTCCAAGAAAGATTTCAGGTT 59.407 36.000 7.97 0.00 39.61 3.50
3786 3892 5.008712 GTCGTTTCCAAGAAAGATTTCAGGT 59.991 40.000 7.97 0.00 39.61 4.00
3817 3923 0.253044 AAGCATGTATGGGCACGTCT 59.747 50.000 0.00 0.00 0.00 4.18
3826 3932 3.603857 GCCGTACGCTAAAAGCATGTATG 60.604 47.826 10.49 0.57 42.58 2.39
3831 3937 2.003672 CGCCGTACGCTAAAAGCAT 58.996 52.632 10.49 0.00 42.58 3.79
3935 4043 3.154710 GGGTCCACTTCGAGGAAATTTT 58.845 45.455 0.00 0.00 36.80 1.82
3936 4044 2.375509 AGGGTCCACTTCGAGGAAATTT 59.624 45.455 0.00 0.00 36.80 1.82
3937 4045 1.985895 AGGGTCCACTTCGAGGAAATT 59.014 47.619 0.00 0.00 36.80 1.82
3938 4046 1.657804 AGGGTCCACTTCGAGGAAAT 58.342 50.000 0.00 0.00 36.80 2.17
3972 4080 1.734137 CGGGACTGATGACCCTACG 59.266 63.158 0.00 0.00 44.29 3.51
3984 4092 0.385751 CGATACTGTCATGCGGGACT 59.614 55.000 8.74 0.00 38.61 3.85
4296 4405 9.625747 ATGTTTTTCAGTTTTGGGAACATAATT 57.374 25.926 0.00 0.00 42.32 1.40
4297 4406 9.625747 AATGTTTTTCAGTTTTGGGAACATAAT 57.374 25.926 0.00 0.00 42.32 1.28
4298 4407 9.103861 GAATGTTTTTCAGTTTTGGGAACATAA 57.896 29.630 0.00 0.00 42.32 1.90
4299 4408 8.260818 TGAATGTTTTTCAGTTTTGGGAACATA 58.739 29.630 0.00 0.00 42.32 2.29
4300 4409 7.108847 TGAATGTTTTTCAGTTTTGGGAACAT 58.891 30.769 0.00 0.00 42.32 2.71
4301 4410 6.467677 TGAATGTTTTTCAGTTTTGGGAACA 58.532 32.000 0.00 0.00 39.83 3.18
4302 4411 6.976636 TGAATGTTTTTCAGTTTTGGGAAC 57.023 33.333 0.00 0.00 0.00 3.62
4303 4412 7.334090 TCATGAATGTTTTTCAGTTTTGGGAA 58.666 30.769 0.00 0.00 0.00 3.97
4304 4413 6.882656 TCATGAATGTTTTTCAGTTTTGGGA 58.117 32.000 0.00 0.00 0.00 4.37
4305 4414 7.551035 TTCATGAATGTTTTTCAGTTTTGGG 57.449 32.000 3.38 0.00 0.00 4.12
4365 4474 9.855021 CCTTTTATTCCATGTTTTACTTACCTG 57.145 33.333 0.00 0.00 0.00 4.00
4366 4475 9.596308 ACCTTTTATTCCATGTTTTACTTACCT 57.404 29.630 0.00 0.00 0.00 3.08
4371 4480 9.802039 TGTCTACCTTTTATTCCATGTTTTACT 57.198 29.630 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.