Multiple sequence alignment - TraesCS4B01G186000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G186000 chr4B 100.000 6617 0 0 1 6617 405902050 405908666 0.000000e+00 12220.0
1 TraesCS4B01G186000 chr4B 95.238 105 5 0 1603 1707 111217884 111217988 4.100000e-37 167.0
2 TraesCS4B01G186000 chr4B 94.393 107 6 0 1601 1707 206242722 206242828 1.480000e-36 165.0
3 TraesCS4B01G186000 chr4B 94.393 107 5 1 1602 1707 592626696 592626590 5.310000e-36 163.0
4 TraesCS4B01G186000 chr4B 95.946 74 2 1 1799 1871 405903763 405903836 1.170000e-22 119.0
5 TraesCS4B01G186000 chr4B 95.946 74 2 1 1714 1787 405903848 405903920 1.170000e-22 119.0
6 TraesCS4B01G186000 chr4B 87.500 88 7 3 3421 3506 172508721 172508806 1.520000e-16 99.0
7 TraesCS4B01G186000 chr4B 80.909 110 19 2 1311 1419 100576661 100576769 1.180000e-12 86.1
8 TraesCS4B01G186000 chr4D 91.301 2391 88 42 3593 5947 325546852 325549158 0.000000e+00 3153.0
9 TraesCS4B01G186000 chr4D 92.327 1577 56 28 57 1612 325543602 325545134 0.000000e+00 2182.0
10 TraesCS4B01G186000 chr4D 89.277 1175 65 29 2115 3269 325545433 325546566 0.000000e+00 1415.0
11 TraesCS4B01G186000 chr4D 92.283 311 14 5 1871 2171 325545142 325545452 3.670000e-117 433.0
12 TraesCS4B01G186000 chr4D 91.736 121 7 3 1588 1707 329878588 329878706 1.480000e-36 165.0
13 TraesCS4B01G186000 chr4D 81.818 110 18 2 1311 1419 68053412 68053520 2.540000e-14 91.6
14 TraesCS4B01G186000 chr4A 95.917 1347 43 5 4765 6105 145345802 145344462 0.000000e+00 2172.0
15 TraesCS4B01G186000 chr4A 88.203 1475 54 48 4 1458 145350693 145349319 0.000000e+00 1650.0
16 TraesCS4B01G186000 chr4A 92.197 628 27 13 4135 4758 145346658 145346049 0.000000e+00 869.0
17 TraesCS4B01G186000 chr4A 88.827 716 43 17 2118 2807 145348785 145348081 0.000000e+00 845.0
18 TraesCS4B01G186000 chr4A 81.227 554 63 26 3597 4125 145347297 145346760 6.180000e-110 409.0
19 TraesCS4B01G186000 chr4A 82.942 469 52 15 2810 3269 145348008 145347559 1.340000e-106 398.0
20 TraesCS4B01G186000 chr4A 90.221 317 13 9 1865 2171 145349077 145348769 1.340000e-106 398.0
21 TraesCS4B01G186000 chr4A 95.122 82 3 1 1450 1530 145349214 145349133 1.940000e-25 128.0
22 TraesCS4B01G186000 chr4A 98.387 62 1 0 4703 4764 145346047 145345986 7.020000e-20 110.0
23 TraesCS4B01G186000 chr7A 95.708 233 8 2 6152 6383 688174825 688175056 2.250000e-99 374.0
24 TraesCS4B01G186000 chr7A 89.855 138 13 1 6377 6513 688176663 688176800 6.820000e-40 176.0
25 TraesCS4B01G186000 chr7A 84.507 71 11 0 4836 4906 428810775 428810845 3.310000e-08 71.3
26 TraesCS4B01G186000 chr5A 94.421 233 11 2 6152 6383 639141693 639141924 2.270000e-94 357.0
27 TraesCS4B01G186000 chr5A 91.053 190 15 2 6377 6564 639174497 639174686 8.520000e-64 255.0
28 TraesCS4B01G186000 chrUn 92.070 227 13 4 6152 6376 224456529 224456752 1.390000e-81 315.0
29 TraesCS4B01G186000 chrUn 92.070 227 13 4 6152 6376 225604477 225604700 1.390000e-81 315.0
30 TraesCS4B01G186000 chrUn 92.070 227 13 4 6152 6376 226150855 226150632 1.390000e-81 315.0
31 TraesCS4B01G186000 chr6A 87.435 191 22 1 1276 1464 1126454 1126644 1.120000e-52 219.0
32 TraesCS4B01G186000 chr6A 88.435 147 17 0 1001 1147 1126238 1126384 1.900000e-40 178.0
33 TraesCS4B01G186000 chr6A 82.993 147 25 0 4841 4987 1133630 1133776 4.160000e-27 134.0
34 TraesCS4B01G186000 chr6A 84.615 78 12 0 993 1070 578887727 578887650 1.980000e-10 78.7
35 TraesCS4B01G186000 chr1D 87.634 186 16 4 1269 1448 9283756 9283940 6.720000e-50 209.0
36 TraesCS4B01G186000 chr1D 89.796 147 15 0 1001 1147 9283505 9283651 8.760000e-44 189.0
37 TraesCS4B01G186000 chr1D 89.583 144 15 0 1308 1451 8997459 8997316 4.080000e-42 183.0
38 TraesCS4B01G186000 chr1D 85.263 95 7 2 3419 3506 115990017 115989923 2.540000e-14 91.6
39 TraesCS4B01G186000 chr1B 90.000 150 15 0 1001 1150 10572335 10572186 1.880000e-45 195.0
40 TraesCS4B01G186000 chr1B 91.489 141 12 0 1001 1141 10944607 10944747 1.880000e-45 195.0
41 TraesCS4B01G186000 chr1B 90.000 150 15 0 1001 1150 29406780 29406631 1.880000e-45 195.0
42 TraesCS4B01G186000 chr1B 90.435 115 10 1 1870 1984 341104116 341104229 4.130000e-32 150.0
43 TraesCS4B01G186000 chr1B 91.358 81 5 2 3428 3506 421093967 421093887 7.020000e-20 110.0
44 TraesCS4B01G186000 chr1B 89.286 84 6 2 3429 3509 637983822 637983739 1.170000e-17 102.0
45 TraesCS4B01G186000 chr1A 86.127 173 18 3 1285 1451 10240358 10240186 1.470000e-41 182.0
46 TraesCS4B01G186000 chr1A 87.234 141 18 0 1001 1141 10241556 10241416 1.910000e-35 161.0
47 TraesCS4B01G186000 chr1A 90.000 80 6 1 3429 3506 311077262 311077341 1.170000e-17 102.0
48 TraesCS4B01G186000 chr1A 88.506 87 4 4 3428 3508 432840464 432840550 4.220000e-17 100.0
49 TraesCS4B01G186000 chr6B 95.238 105 5 0 1603 1707 289915412 289915308 4.100000e-37 167.0
50 TraesCS4B01G186000 chr5B 95.238 105 5 0 1603 1707 409548873 409548769 4.100000e-37 167.0
51 TraesCS4B01G186000 chr5B 92.982 114 6 2 1595 1707 363665484 363665372 1.480000e-36 165.0
52 TraesCS4B01G186000 chr3B 95.192 104 5 0 1604 1707 723448436 723448539 1.480000e-36 165.0
53 TraesCS4B01G186000 chr3B 83.750 80 13 0 4836 4915 466106505 466106426 7.120000e-10 76.8
54 TraesCS4B01G186000 chr7B 90.678 118 10 1 1590 1707 32329276 32329392 8.880000e-34 156.0
55 TraesCS4B01G186000 chr7B 84.507 71 11 0 4836 4906 375191217 375191287 3.310000e-08 71.3
56 TraesCS4B01G186000 chr7D 86.022 93 5 5 3421 3506 312463929 312464020 7.070000e-15 93.5
57 TraesCS4B01G186000 chr7D 84.286 70 11 0 4837 4906 380145909 380145978 1.190000e-07 69.4
58 TraesCS4B01G186000 chr2B 86.364 88 9 2 3429 3513 726552211 726552124 7.070000e-15 93.5
59 TraesCS4B01G186000 chr5D 84.848 99 6 5 3429 3518 104973015 104972917 2.540000e-14 91.6
60 TraesCS4B01G186000 chr3D 83.750 80 13 0 4836 4915 360048690 360048611 7.120000e-10 76.8
61 TraesCS4B01G186000 chr3A 83.750 80 13 0 4836 4915 479481625 479481546 7.120000e-10 76.8
62 TraesCS4B01G186000 chr2D 78.049 123 19 6 1328 1446 471450860 471450742 3.310000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G186000 chr4B 405902050 405908666 6616 False 12220.000000 12220 100.000000 1 6617 1 chr4B.!!$F5 6616
1 TraesCS4B01G186000 chr4D 325543602 325549158 5556 False 1795.750000 3153 91.297000 57 5947 4 chr4D.!!$F3 5890
2 TraesCS4B01G186000 chr4A 145344462 145350693 6231 True 775.444444 2172 90.338111 4 6105 9 chr4A.!!$R1 6101
3 TraesCS4B01G186000 chr7A 688174825 688176800 1975 False 275.000000 374 92.781500 6152 6513 2 chr7A.!!$F2 361

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
655 657 0.250901 TCCTCCTACGTATACCGCCC 60.251 60.0 0.00 0.00 41.42 6.13 F
1596 1732 0.107897 TCGAACAACCCGCTATGCAT 60.108 50.0 3.79 3.79 0.00 3.96 F
1696 1832 0.246360 CCCACGTCAGCACATAGACA 59.754 55.0 0.00 0.00 34.48 3.41 F
3276 3568 0.118144 AGCCTCTCTCTCCCCAACTT 59.882 55.0 0.00 0.00 0.00 2.66 F
4028 4416 0.038744 AAGACAGTGGGAATGGCCTG 59.961 55.0 3.32 0.00 36.66 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1677 1813 0.246360 TGTCTATGTGCTGACGTGGG 59.754 55.0 0.00 0.00 36.10 4.61 R
3257 3549 0.118144 AAGTTGGGGAGAGAGAGGCT 59.882 55.0 0.00 0.00 0.00 4.58 R
3283 3575 0.539518 GAAGTTGGGGAGAGAGAGGC 59.460 60.0 0.00 0.00 0.00 4.70 R
4826 5547 0.107945 GGACCATCTGCCAGTCAGTC 60.108 60.0 0.00 0.00 43.32 3.51 R
5845 6576 0.179156 CGGGATGCATTGCACAGAAC 60.179 55.0 14.66 2.62 43.04 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.299541 CTCGCTTTACCATTCGGCAT 58.700 50.000 0.00 0.00 34.57 4.40
47 48 7.333323 TCGGCATGAATGATGAACTATATCAT 58.667 34.615 0.00 0.00 44.78 2.45
77 78 5.048713 AGGAAAAGGAACAACTCGCTTTATG 60.049 40.000 0.00 0.00 29.55 1.90
78 79 5.278315 GGAAAAGGAACAACTCGCTTTATGT 60.278 40.000 0.00 0.00 29.55 2.29
79 80 5.767816 AAAGGAACAACTCGCTTTATGTT 57.232 34.783 0.00 0.00 38.62 2.71
80 81 5.767816 AAGGAACAACTCGCTTTATGTTT 57.232 34.783 0.00 0.00 36.22 2.83
81 82 6.870971 AAGGAACAACTCGCTTTATGTTTA 57.129 33.333 0.00 0.00 36.22 2.01
84 85 5.567915 GGAACAACTCGCTTTATGTTTAAGC 59.432 40.000 0.00 0.00 43.49 3.09
86 87 6.067263 ACAACTCGCTTTATGTTTAAGCAA 57.933 33.333 8.15 0.00 46.44 3.91
87 88 6.677913 ACAACTCGCTTTATGTTTAAGCAAT 58.322 32.000 8.15 0.00 46.44 3.56
88 89 7.812648 ACAACTCGCTTTATGTTTAAGCAATA 58.187 30.769 8.15 0.00 46.44 1.90
89 90 8.293867 ACAACTCGCTTTATGTTTAAGCAATAA 58.706 29.630 8.15 0.00 46.44 1.40
90 91 9.123709 CAACTCGCTTTATGTTTAAGCAATAAA 57.876 29.630 8.15 2.39 46.44 1.40
169 170 6.327365 TCCAACAGGAAGAGATGAAGCATATA 59.673 38.462 0.00 0.00 0.00 0.86
179 180 8.512966 AGAGATGAAGCATATATAGCGAGTTA 57.487 34.615 0.00 0.00 37.01 2.24
182 183 8.744652 AGATGAAGCATATATAGCGAGTTAGTT 58.255 33.333 0.00 0.00 37.01 2.24
183 184 9.360093 GATGAAGCATATATAGCGAGTTAGTTT 57.640 33.333 0.00 0.00 37.01 2.66
184 185 8.520835 TGAAGCATATATAGCGAGTTAGTTTG 57.479 34.615 0.00 0.00 37.01 2.93
185 186 8.141909 TGAAGCATATATAGCGAGTTAGTTTGT 58.858 33.333 0.00 0.00 37.01 2.83
186 187 9.622004 GAAGCATATATAGCGAGTTAGTTTGTA 57.378 33.333 0.00 0.00 37.01 2.41
187 188 9.976511 AAGCATATATAGCGAGTTAGTTTGTAA 57.023 29.630 0.00 0.00 37.01 2.41
188 189 9.627395 AGCATATATAGCGAGTTAGTTTGTAAG 57.373 33.333 0.00 0.00 37.01 2.34
189 190 9.408069 GCATATATAGCGAGTTAGTTTGTAAGT 57.592 33.333 0.00 0.00 0.00 2.24
207 208 2.015587 AGTAGTAGAAGCTCGAACGGG 58.984 52.381 0.00 0.00 0.00 5.28
216 217 1.409427 AGCTCGAACGGGGAAGATTAG 59.591 52.381 0.00 0.00 0.00 1.73
217 218 1.538419 GCTCGAACGGGGAAGATTAGG 60.538 57.143 0.00 0.00 0.00 2.69
218 219 1.755380 CTCGAACGGGGAAGATTAGGT 59.245 52.381 0.00 0.00 0.00 3.08
219 220 2.954318 CTCGAACGGGGAAGATTAGGTA 59.046 50.000 0.00 0.00 0.00 3.08
253 254 5.559148 ACAGGAAGAGATGAACCATATCC 57.441 43.478 0.00 0.00 33.15 2.59
274 275 2.074547 TCGGGAAGCGTACTGAAAAG 57.925 50.000 0.00 0.00 0.00 2.27
322 324 4.037208 AGCTTCGGGATAGCATTCAAAATG 59.963 41.667 0.00 0.00 41.11 2.32
473 475 0.389025 ATAGCGATCCATGTGTGCGA 59.611 50.000 0.00 0.00 0.00 5.10
518 520 2.227089 GAAGCGGACGATGGTGAGGT 62.227 60.000 0.00 0.00 0.00 3.85
619 621 2.691011 GGGCCAAAGTTAATTGCCGATA 59.309 45.455 4.39 0.00 31.42 2.92
648 650 0.473326 ACGCTCCTCCTCCTACGTAT 59.527 55.000 0.00 0.00 31.03 3.06
649 651 1.696336 ACGCTCCTCCTCCTACGTATA 59.304 52.381 0.00 0.00 31.03 1.47
650 652 2.075338 CGCTCCTCCTCCTACGTATAC 58.925 57.143 0.00 0.00 0.00 1.47
652 654 2.697654 CTCCTCCTCCTACGTATACCG 58.302 57.143 0.00 0.00 44.03 4.02
653 655 1.163554 CCTCCTCCTACGTATACCGC 58.836 60.000 0.00 0.00 41.42 5.68
654 656 1.163554 CTCCTCCTACGTATACCGCC 58.836 60.000 0.00 0.00 41.42 6.13
655 657 0.250901 TCCTCCTACGTATACCGCCC 60.251 60.000 0.00 0.00 41.42 6.13
656 658 0.251077 CCTCCTACGTATACCGCCCT 60.251 60.000 0.00 0.00 41.42 5.19
657 659 1.003580 CCTCCTACGTATACCGCCCTA 59.996 57.143 0.00 0.00 41.42 3.53
658 660 2.079925 CTCCTACGTATACCGCCCTAC 58.920 57.143 0.00 0.00 41.42 3.18
659 661 1.168714 CCTACGTATACCGCCCTACC 58.831 60.000 0.00 0.00 41.42 3.18
660 662 0.798776 CTACGTATACCGCCCTACCG 59.201 60.000 0.00 0.00 41.42 4.02
702 704 3.252974 GTGCTATATTATGGCGCCTCT 57.747 47.619 29.70 17.57 40.79 3.69
730 732 3.188786 GTGCGTGGCCGAAGCTAG 61.189 66.667 16.13 0.00 39.73 3.42
732 734 4.821589 GCGTGGCCGAAGCTAGCT 62.822 66.667 12.68 12.68 39.73 3.32
733 735 2.583593 CGTGGCCGAAGCTAGCTC 60.584 66.667 19.65 10.69 39.73 4.09
734 736 2.583593 GTGGCCGAAGCTAGCTCG 60.584 66.667 19.65 21.13 39.73 5.03
735 737 4.514577 TGGCCGAAGCTAGCTCGC 62.515 66.667 19.65 18.88 39.73 5.03
739 741 4.593864 CGAAGCTAGCTCGCCCCC 62.594 72.222 19.65 2.71 0.00 5.40
740 742 4.593864 GAAGCTAGCTCGCCCCCG 62.594 72.222 19.65 0.00 0.00 5.73
783 785 1.535833 GAACGACTGACCCAGAGAGA 58.464 55.000 0.45 0.00 35.18 3.10
784 786 1.470890 GAACGACTGACCCAGAGAGAG 59.529 57.143 0.45 0.00 35.18 3.20
800 804 5.049198 CAGAGAGAGAAGAGGAAGATCATCG 60.049 48.000 0.00 0.00 31.60 3.84
803 807 2.627699 GAGAAGAGGAAGATCATCGCCT 59.372 50.000 2.06 2.06 31.60 5.52
804 808 3.037549 AGAAGAGGAAGATCATCGCCTT 58.962 45.455 3.89 0.00 31.60 4.35
859 872 1.632965 GGATCCACTACACCCCCACC 61.633 65.000 6.95 0.00 0.00 4.61
965 987 1.741770 CGTGTGTTGGGAGCTAGCC 60.742 63.158 12.13 2.59 0.00 3.93
985 1007 0.321387 AGCGAGACACGTACTCCAGA 60.321 55.000 13.70 0.00 44.60 3.86
996 1018 2.798499 CGTACTCCAGAATACAAGGGCG 60.798 54.545 0.00 0.00 0.00 6.13
1119 1141 0.690411 AGGGCTCATGGAGGTCTCTG 60.690 60.000 0.00 0.00 0.00 3.35
1141 1163 3.005155 GCCCAAGAATGCAGGTGAATATC 59.995 47.826 0.00 0.00 0.00 1.63
1162 1184 2.472059 ATAAGCCCGTGCATGTGCG 61.472 57.895 7.76 0.00 45.83 5.34
1163 1185 2.867793 ATAAGCCCGTGCATGTGCGA 62.868 55.000 7.76 0.75 45.83 5.10
1167 1189 2.509111 CCGTGCATGTGCGAGCTA 60.509 61.111 4.96 0.00 45.83 3.32
1218 1240 4.461781 AGCTATTTTCTTTGTCTGCAGCAT 59.538 37.500 9.47 0.00 0.00 3.79
1261 1283 6.876257 ACTTTTCAGACAGATTAACTAGGCAG 59.124 38.462 0.00 0.00 0.00 4.85
1485 1620 8.431222 ACCAGTATACACCTGTTTTAGTTTACA 58.569 33.333 5.50 0.00 0.00 2.41
1507 1642 5.302313 ACAACCTTTAATTTTTACCCTGCGA 59.698 36.000 0.00 0.00 0.00 5.10
1568 1704 3.310501 AGTGTACCAAAGTTTACGTGCAC 59.689 43.478 19.72 19.72 40.71 4.57
1570 1706 1.026584 ACCAAAGTTTACGTGCACCC 58.973 50.000 12.15 0.00 0.00 4.61
1587 1723 1.072806 ACCCCTACTTTCGAACAACCC 59.927 52.381 0.00 0.00 0.00 4.11
1596 1732 0.107897 TCGAACAACCCGCTATGCAT 60.108 50.000 3.79 3.79 0.00 3.96
1597 1733 1.137282 TCGAACAACCCGCTATGCATA 59.863 47.619 6.20 6.20 0.00 3.14
1598 1734 1.526887 CGAACAACCCGCTATGCATAG 59.473 52.381 26.42 26.42 0.00 2.23
1599 1735 2.801699 CGAACAACCCGCTATGCATAGA 60.802 50.000 33.10 3.21 32.05 1.98
1600 1736 3.202906 GAACAACCCGCTATGCATAGAA 58.797 45.455 33.10 2.41 32.05 2.10
1601 1737 3.492102 ACAACCCGCTATGCATAGAAT 57.508 42.857 33.10 14.18 32.05 2.40
1602 1738 3.820557 ACAACCCGCTATGCATAGAATT 58.179 40.909 33.10 18.49 32.05 2.17
1603 1739 4.968259 ACAACCCGCTATGCATAGAATTA 58.032 39.130 33.10 0.81 32.05 1.40
1604 1740 5.373222 ACAACCCGCTATGCATAGAATTAA 58.627 37.500 33.10 0.02 32.05 1.40
1605 1741 5.470098 ACAACCCGCTATGCATAGAATTAAG 59.530 40.000 33.10 20.28 32.05 1.85
1606 1742 4.579869 ACCCGCTATGCATAGAATTAAGG 58.420 43.478 33.10 23.22 32.05 2.69
1607 1743 3.941483 CCCGCTATGCATAGAATTAAGGG 59.059 47.826 33.10 26.26 32.05 3.95
1608 1744 4.323485 CCCGCTATGCATAGAATTAAGGGA 60.323 45.833 33.10 0.00 36.18 4.20
1609 1745 4.872691 CCGCTATGCATAGAATTAAGGGAG 59.127 45.833 33.10 8.94 32.05 4.30
1610 1746 5.482908 CGCTATGCATAGAATTAAGGGAGT 58.517 41.667 33.10 0.00 32.05 3.85
1611 1747 6.351033 CCGCTATGCATAGAATTAAGGGAGTA 60.351 42.308 33.10 0.00 32.05 2.59
1612 1748 6.531948 CGCTATGCATAGAATTAAGGGAGTAC 59.468 42.308 33.10 11.86 32.05 2.73
1613 1749 6.819146 GCTATGCATAGAATTAAGGGAGTACC 59.181 42.308 33.10 9.07 34.01 3.34
1614 1750 7.310734 GCTATGCATAGAATTAAGGGAGTACCT 60.311 40.741 33.10 0.00 41.40 3.08
1615 1751 9.256228 CTATGCATAGAATTAAGGGAGTACCTA 57.744 37.037 26.63 0.00 39.77 3.08
1629 1765 7.842887 GGGAGTACCTAAAACTCATCTAGAT 57.157 40.000 0.00 0.00 44.25 1.98
1630 1766 7.662897 GGGAGTACCTAAAACTCATCTAGATG 58.337 42.308 24.32 24.32 44.25 2.90
1631 1767 7.506261 GGGAGTACCTAAAACTCATCTAGATGA 59.494 40.741 29.17 29.17 44.25 2.92
1682 1818 8.582433 AAAAATAAGAACAAATACAACCCACG 57.418 30.769 0.00 0.00 0.00 4.94
1683 1819 6.887626 AATAAGAACAAATACAACCCACGT 57.112 33.333 0.00 0.00 0.00 4.49
1684 1820 4.823790 AAGAACAAATACAACCCACGTC 57.176 40.909 0.00 0.00 0.00 4.34
1685 1821 3.811083 AGAACAAATACAACCCACGTCA 58.189 40.909 0.00 0.00 0.00 4.35
1686 1822 3.813166 AGAACAAATACAACCCACGTCAG 59.187 43.478 0.00 0.00 0.00 3.51
1687 1823 1.877443 ACAAATACAACCCACGTCAGC 59.123 47.619 0.00 0.00 0.00 4.26
1688 1824 1.876799 CAAATACAACCCACGTCAGCA 59.123 47.619 0.00 0.00 0.00 4.41
1689 1825 1.519408 AATACAACCCACGTCAGCAC 58.481 50.000 0.00 0.00 0.00 4.40
1690 1826 0.394938 ATACAACCCACGTCAGCACA 59.605 50.000 0.00 0.00 0.00 4.57
1691 1827 0.394938 TACAACCCACGTCAGCACAT 59.605 50.000 0.00 0.00 0.00 3.21
1692 1828 0.394938 ACAACCCACGTCAGCACATA 59.605 50.000 0.00 0.00 0.00 2.29
1693 1829 1.078709 CAACCCACGTCAGCACATAG 58.921 55.000 0.00 0.00 0.00 2.23
1694 1830 0.973632 AACCCACGTCAGCACATAGA 59.026 50.000 0.00 0.00 0.00 1.98
1695 1831 0.246635 ACCCACGTCAGCACATAGAC 59.753 55.000 0.00 0.00 0.00 2.59
1696 1832 0.246360 CCCACGTCAGCACATAGACA 59.754 55.000 0.00 0.00 34.48 3.41
1697 1833 1.134699 CCCACGTCAGCACATAGACAT 60.135 52.381 0.00 0.00 34.48 3.06
1698 1834 2.196749 CCACGTCAGCACATAGACATC 58.803 52.381 0.00 0.00 34.48 3.06
1699 1835 2.159184 CCACGTCAGCACATAGACATCT 60.159 50.000 0.00 0.00 34.48 2.90
1700 1836 3.515630 CACGTCAGCACATAGACATCTT 58.484 45.455 0.00 0.00 34.48 2.40
1701 1837 4.440112 CCACGTCAGCACATAGACATCTTA 60.440 45.833 0.00 0.00 34.48 2.10
1702 1838 5.284864 CACGTCAGCACATAGACATCTTAT 58.715 41.667 0.00 0.00 34.48 1.73
1703 1839 6.438763 CACGTCAGCACATAGACATCTTATA 58.561 40.000 0.00 0.00 34.48 0.98
1704 1840 6.580416 CACGTCAGCACATAGACATCTTATAG 59.420 42.308 0.00 0.00 34.48 1.31
1705 1841 5.570973 CGTCAGCACATAGACATCTTATAGC 59.429 44.000 0.00 0.00 34.48 2.97
1706 1842 6.450545 GTCAGCACATAGACATCTTATAGCA 58.549 40.000 0.00 0.00 34.93 3.49
1707 1843 6.925718 GTCAGCACATAGACATCTTATAGCAA 59.074 38.462 0.00 0.00 34.93 3.91
1708 1844 7.439356 GTCAGCACATAGACATCTTATAGCAAA 59.561 37.037 0.00 0.00 34.93 3.68
1709 1845 7.986889 TCAGCACATAGACATCTTATAGCAAAA 59.013 33.333 0.00 0.00 0.00 2.44
1710 1846 8.281194 CAGCACATAGACATCTTATAGCAAAAG 58.719 37.037 0.00 0.00 0.00 2.27
1711 1847 7.989741 AGCACATAGACATCTTATAGCAAAAGT 59.010 33.333 0.00 0.00 0.00 2.66
1712 1848 8.066595 GCACATAGACATCTTATAGCAAAAGTG 58.933 37.037 0.00 0.00 0.00 3.16
1713 1849 9.102757 CACATAGACATCTTATAGCAAAAGTGT 57.897 33.333 0.00 0.00 0.00 3.55
1718 1854 9.102757 AGACATCTTATAGCAAAAGTGTACATG 57.897 33.333 0.00 0.00 0.00 3.21
1719 1855 8.213518 ACATCTTATAGCAAAAGTGTACATGG 57.786 34.615 0.00 0.00 0.00 3.66
1720 1856 7.283127 ACATCTTATAGCAAAAGTGTACATGGG 59.717 37.037 0.00 0.00 0.00 4.00
1721 1857 6.717289 TCTTATAGCAAAAGTGTACATGGGT 58.283 36.000 0.00 0.00 0.00 4.51
1722 1858 7.172342 TCTTATAGCAAAAGTGTACATGGGTT 58.828 34.615 0.00 0.00 0.00 4.11
1723 1859 5.897377 ATAGCAAAAGTGTACATGGGTTC 57.103 39.130 0.00 0.00 0.00 3.62
1724 1860 3.832527 AGCAAAAGTGTACATGGGTTCT 58.167 40.909 0.00 0.00 0.00 3.01
1725 1861 4.980573 AGCAAAAGTGTACATGGGTTCTA 58.019 39.130 0.00 0.00 0.00 2.10
1726 1862 5.003804 AGCAAAAGTGTACATGGGTTCTAG 58.996 41.667 0.00 0.00 0.00 2.43
1727 1863 4.379499 GCAAAAGTGTACATGGGTTCTAGC 60.379 45.833 0.00 0.00 0.00 3.42
1728 1864 4.634012 AAAGTGTACATGGGTTCTAGCA 57.366 40.909 0.00 0.00 0.00 3.49
1729 1865 4.634012 AAGTGTACATGGGTTCTAGCAA 57.366 40.909 0.00 0.00 0.00 3.91
1730 1866 4.634012 AGTGTACATGGGTTCTAGCAAA 57.366 40.909 0.00 0.00 0.00 3.68
1731 1867 4.980573 AGTGTACATGGGTTCTAGCAAAA 58.019 39.130 0.00 0.00 0.00 2.44
1732 1868 5.003804 AGTGTACATGGGTTCTAGCAAAAG 58.996 41.667 0.00 0.00 0.00 2.27
1733 1869 4.760204 GTGTACATGGGTTCTAGCAAAAGT 59.240 41.667 0.00 0.00 0.00 2.66
1734 1870 4.759693 TGTACATGGGTTCTAGCAAAAGTG 59.240 41.667 0.00 0.00 0.00 3.16
1735 1871 3.832527 ACATGGGTTCTAGCAAAAGTGT 58.167 40.909 0.00 0.00 0.00 3.55
1768 1904 9.853177 AATGAGTAATAAAGTTCTATTGGGAGG 57.147 33.333 0.00 0.00 0.00 4.30
1770 1906 7.127339 TGAGTAATAAAGTTCTATTGGGAGGCT 59.873 37.037 0.00 0.00 0.00 4.58
1771 1907 7.873195 AGTAATAAAGTTCTATTGGGAGGCTT 58.127 34.615 0.00 0.00 0.00 4.35
1772 1908 7.993758 AGTAATAAAGTTCTATTGGGAGGCTTC 59.006 37.037 0.00 0.00 0.00 3.86
1774 1910 2.467880 AGTTCTATTGGGAGGCTTCGA 58.532 47.619 0.00 0.00 0.00 3.71
1775 1911 2.838202 AGTTCTATTGGGAGGCTTCGAA 59.162 45.455 0.00 0.00 0.00 3.71
1776 1912 3.263425 AGTTCTATTGGGAGGCTTCGAAA 59.737 43.478 0.00 0.00 0.00 3.46
1777 1913 3.992943 TCTATTGGGAGGCTTCGAAAA 57.007 42.857 0.00 0.00 0.00 2.29
1778 1914 4.295141 TCTATTGGGAGGCTTCGAAAAA 57.705 40.909 0.00 0.00 0.00 1.94
1820 1956 8.854614 ATCTAAATGAGTTCTAGCAAAAGTGT 57.145 30.769 0.00 0.00 0.00 3.55
1821 1957 9.944376 ATCTAAATGAGTTCTAGCAAAAGTGTA 57.056 29.630 0.00 0.00 0.00 2.90
1822 1958 9.424319 TCTAAATGAGTTCTAGCAAAAGTGTAG 57.576 33.333 0.00 0.00 0.00 2.74
1823 1959 9.424319 CTAAATGAGTTCTAGCAAAAGTGTAGA 57.576 33.333 0.00 0.00 0.00 2.59
1824 1960 8.677148 AAATGAGTTCTAGCAAAAGTGTAGAA 57.323 30.769 0.00 0.00 31.74 2.10
1825 1961 8.854614 AATGAGTTCTAGCAAAAGTGTAGAAT 57.145 30.769 0.00 0.00 35.71 2.40
1826 1962 8.854614 ATGAGTTCTAGCAAAAGTGTAGAATT 57.145 30.769 0.00 0.00 35.71 2.17
1827 1963 9.944376 ATGAGTTCTAGCAAAAGTGTAGAATTA 57.056 29.630 0.00 0.00 35.71 1.40
1828 1964 9.772973 TGAGTTCTAGCAAAAGTGTAGAATTAA 57.227 29.630 0.00 0.00 35.71 1.40
1833 1969 9.944376 TCTAGCAAAAGTGTAGAATTAATGAGT 57.056 29.630 0.00 0.00 0.00 3.41
1853 1989 9.853177 AATGAGTAATAAAGTTCTATTGGGAGG 57.147 33.333 0.00 0.00 0.00 4.30
1854 1990 7.280356 TGAGTAATAAAGTTCTATTGGGAGGC 58.720 38.462 0.00 0.00 0.00 4.70
1855 1991 7.127339 TGAGTAATAAAGTTCTATTGGGAGGCT 59.873 37.037 0.00 0.00 0.00 4.58
1856 1992 7.873195 AGTAATAAAGTTCTATTGGGAGGCTT 58.127 34.615 0.00 0.00 0.00 4.35
1857 1993 7.993758 AGTAATAAAGTTCTATTGGGAGGCTTC 59.006 37.037 0.00 0.00 0.00 3.86
1858 1994 2.990066 AGTTCTATTGGGAGGCTTCG 57.010 50.000 0.00 0.00 0.00 3.79
1859 1995 2.467880 AGTTCTATTGGGAGGCTTCGA 58.532 47.619 0.00 0.00 0.00 3.71
1860 1996 2.838202 AGTTCTATTGGGAGGCTTCGAA 59.162 45.455 0.00 0.00 0.00 3.71
1861 1997 3.263425 AGTTCTATTGGGAGGCTTCGAAA 59.737 43.478 0.00 0.00 0.00 3.46
1862 1998 3.992943 TCTATTGGGAGGCTTCGAAAA 57.007 42.857 0.00 0.00 0.00 2.29
1863 1999 4.295141 TCTATTGGGAGGCTTCGAAAAA 57.705 40.909 0.00 0.00 0.00 1.94
1917 2053 6.342111 GGATCAGTCCAAAAGAGGTAAGTAG 58.658 44.000 0.00 0.00 44.42 2.57
1944 2081 5.730296 AACTCTAGTGCATTGACTACTGT 57.270 39.130 0.00 0.00 0.00 3.55
1981 2120 1.891919 ATGGCTTTGTCACGTGCGT 60.892 52.632 11.67 0.00 0.00 5.24
2076 2215 2.287788 CGTGTACCACAAACTAGACGGT 60.288 50.000 0.00 0.00 33.40 4.83
2108 2247 9.256228 ACTGTTTAGGTTGAGAGTTCAGATATA 57.744 33.333 0.00 0.00 34.15 0.86
2112 2251 5.593010 AGGTTGAGAGTTCAGATATAACGC 58.407 41.667 0.00 0.00 34.15 4.84
2113 2252 5.361285 AGGTTGAGAGTTCAGATATAACGCT 59.639 40.000 0.00 0.00 39.29 5.07
2155 2353 5.049336 CGTACAGCTCAGTATGCTACTACAT 60.049 44.000 0.00 0.00 38.92 2.29
2157 2355 7.148390 CGTACAGCTCAGTATGCTACTACATAT 60.148 40.741 0.00 0.00 38.92 1.78
2184 2384 4.097286 TCATAGCGTAATGACTGTAGTGCA 59.903 41.667 0.00 0.00 30.92 4.57
2196 2396 5.090652 ACTGTAGTGCAAATTGTACAACG 57.909 39.130 16.02 3.81 35.34 4.10
2210 2410 0.948678 ACAACGTCCGACAATTTGGG 59.051 50.000 0.78 0.00 0.00 4.12
2218 2418 1.812571 CCGACAATTTGGGTTGAGAGG 59.187 52.381 0.78 0.00 33.37 3.69
2245 2445 3.185188 GCATCACATCCAATACGCTACTG 59.815 47.826 0.00 0.00 0.00 2.74
2253 2463 5.777850 TCCAATACGCTACTGTATGCTTA 57.222 39.130 7.37 3.97 35.30 3.09
2263 2473 6.166279 GCTACTGTATGCTTATATGGCTGAA 58.834 40.000 4.57 0.00 0.00 3.02
2265 2475 7.335422 GCTACTGTATGCTTATATGGCTGAAAT 59.665 37.037 4.57 0.00 0.00 2.17
2266 2476 9.224267 CTACTGTATGCTTATATGGCTGAAATT 57.776 33.333 4.57 0.00 0.00 1.82
2278 2492 5.772825 TGGCTGAAATTAACATAGGCATC 57.227 39.130 0.00 0.00 38.74 3.91
2299 2513 1.623973 CTTCGTTTTCTCGTCCGGCC 61.624 60.000 0.00 0.00 0.00 6.13
2301 2515 1.666872 CGTTTTCTCGTCCGGCCTT 60.667 57.895 0.00 0.00 0.00 4.35
2325 2539 6.264832 TGTTTCATGTGCTTTTTCTACTGTG 58.735 36.000 0.00 0.00 0.00 3.66
2385 2599 0.723414 CTATGTGGTGCTTGTCGCTG 59.277 55.000 0.00 0.00 40.11 5.18
2527 2741 2.492090 CTCTCGGTCAAGCTCGGG 59.508 66.667 0.00 0.00 0.00 5.14
2544 2758 1.674817 CGGGAATTTGTAGAGCGTGGT 60.675 52.381 0.00 0.00 0.00 4.16
2582 2796 1.012086 CATGGTCTGTCAATGCTCCG 58.988 55.000 0.00 0.00 0.00 4.63
2623 2837 1.232621 GCCCGCACGTAGTCCTTTTT 61.233 55.000 0.00 0.00 41.61 1.94
2646 2860 2.159382 CTCCAACACAAACCCGCTTAT 58.841 47.619 0.00 0.00 0.00 1.73
2647 2861 2.156098 TCCAACACAAACCCGCTTATC 58.844 47.619 0.00 0.00 0.00 1.75
2648 2862 1.883275 CCAACACAAACCCGCTTATCA 59.117 47.619 0.00 0.00 0.00 2.15
2649 2863 2.491693 CCAACACAAACCCGCTTATCAT 59.508 45.455 0.00 0.00 0.00 2.45
2657 2871 3.735237 ACCCGCTTATCATCTGTAGTG 57.265 47.619 0.00 0.00 0.00 2.74
2663 2877 4.861462 CGCTTATCATCTGTAGTGCATAGG 59.139 45.833 0.00 0.00 0.00 2.57
2717 2932 0.736053 GAAAACACTTGCACGGGACA 59.264 50.000 0.00 0.00 0.00 4.02
2789 3004 2.202892 GCTACCGCTAGCACCCAC 60.203 66.667 16.45 0.00 44.45 4.61
2839 3124 4.092968 GGAATTCGACCGCATATATGAACC 59.907 45.833 17.10 0.00 0.00 3.62
3014 3305 8.761575 ACAATTCATGAAAATACTGCGAAAAT 57.238 26.923 13.09 0.00 0.00 1.82
3068 3359 7.737972 TTAGATTTCTCGTGGAAACATTTCA 57.262 32.000 6.68 0.00 45.29 2.69
3246 3538 7.396540 AAACAAATCTCTCTCTCTCTCTCTC 57.603 40.000 0.00 0.00 0.00 3.20
3247 3539 6.319048 ACAAATCTCTCTCTCTCTCTCTCT 57.681 41.667 0.00 0.00 0.00 3.10
3248 3540 7.437713 ACAAATCTCTCTCTCTCTCTCTCTA 57.562 40.000 0.00 0.00 0.00 2.43
3249 3541 7.861629 ACAAATCTCTCTCTCTCTCTCTCTAA 58.138 38.462 0.00 0.00 0.00 2.10
3250 3542 7.770897 ACAAATCTCTCTCTCTCTCTCTCTAAC 59.229 40.741 0.00 0.00 0.00 2.34
3251 3543 7.682787 AATCTCTCTCTCTCTCTCTCTAACT 57.317 40.000 0.00 0.00 0.00 2.24
3252 3544 7.682787 ATCTCTCTCTCTCTCTCTCTAACTT 57.317 40.000 0.00 0.00 0.00 2.66
3253 3545 7.496346 TCTCTCTCTCTCTCTCTCTAACTTT 57.504 40.000 0.00 0.00 0.00 2.66
3254 3546 7.918076 TCTCTCTCTCTCTCTCTCTAACTTTT 58.082 38.462 0.00 0.00 0.00 2.27
3255 3547 8.383175 TCTCTCTCTCTCTCTCTCTAACTTTTT 58.617 37.037 0.00 0.00 0.00 1.94
3272 3564 2.642171 TTTTAGCCTCTCTCTCCCCA 57.358 50.000 0.00 0.00 0.00 4.96
3273 3565 2.642171 TTTAGCCTCTCTCTCCCCAA 57.358 50.000 0.00 0.00 0.00 4.12
3274 3566 1.867363 TTAGCCTCTCTCTCCCCAAC 58.133 55.000 0.00 0.00 0.00 3.77
3275 3567 1.011595 TAGCCTCTCTCTCCCCAACT 58.988 55.000 0.00 0.00 0.00 3.16
3276 3568 0.118144 AGCCTCTCTCTCCCCAACTT 59.882 55.000 0.00 0.00 0.00 2.66
3277 3569 0.539518 GCCTCTCTCTCCCCAACTTC 59.460 60.000 0.00 0.00 0.00 3.01
3278 3570 1.899438 GCCTCTCTCTCCCCAACTTCT 60.899 57.143 0.00 0.00 0.00 2.85
3279 3571 2.545810 CCTCTCTCTCCCCAACTTCTT 58.454 52.381 0.00 0.00 0.00 2.52
3280 3572 2.909662 CCTCTCTCTCCCCAACTTCTTT 59.090 50.000 0.00 0.00 0.00 2.52
3281 3573 3.329225 CCTCTCTCTCCCCAACTTCTTTT 59.671 47.826 0.00 0.00 0.00 2.27
3282 3574 4.532521 CCTCTCTCTCCCCAACTTCTTTTA 59.467 45.833 0.00 0.00 0.00 1.52
3283 3575 5.337975 CCTCTCTCTCCCCAACTTCTTTTAG 60.338 48.000 0.00 0.00 0.00 1.85
3284 3576 4.020128 TCTCTCTCCCCAACTTCTTTTAGC 60.020 45.833 0.00 0.00 0.00 3.09
3285 3577 3.009143 TCTCTCCCCAACTTCTTTTAGCC 59.991 47.826 0.00 0.00 0.00 3.93
3286 3578 2.986728 TCTCCCCAACTTCTTTTAGCCT 59.013 45.455 0.00 0.00 0.00 4.58
3287 3579 3.009143 TCTCCCCAACTTCTTTTAGCCTC 59.991 47.826 0.00 0.00 0.00 4.70
3288 3580 2.986728 TCCCCAACTTCTTTTAGCCTCT 59.013 45.455 0.00 0.00 0.00 3.69
3289 3581 3.009143 TCCCCAACTTCTTTTAGCCTCTC 59.991 47.826 0.00 0.00 0.00 3.20
3290 3582 3.009584 CCCCAACTTCTTTTAGCCTCTCT 59.990 47.826 0.00 0.00 0.00 3.10
3291 3583 4.257731 CCCAACTTCTTTTAGCCTCTCTC 58.742 47.826 0.00 0.00 0.00 3.20
3292 3584 4.019771 CCCAACTTCTTTTAGCCTCTCTCT 60.020 45.833 0.00 0.00 0.00 3.10
3293 3585 5.175127 CCAACTTCTTTTAGCCTCTCTCTC 58.825 45.833 0.00 0.00 0.00 3.20
3294 3586 5.175127 CAACTTCTTTTAGCCTCTCTCTCC 58.825 45.833 0.00 0.00 0.00 3.71
3295 3587 3.772572 ACTTCTTTTAGCCTCTCTCTCCC 59.227 47.826 0.00 0.00 0.00 4.30
3296 3588 2.753247 TCTTTTAGCCTCTCTCTCCCC 58.247 52.381 0.00 0.00 0.00 4.81
3297 3589 2.044492 TCTTTTAGCCTCTCTCTCCCCA 59.956 50.000 0.00 0.00 0.00 4.96
3298 3590 2.642171 TTTAGCCTCTCTCTCCCCAA 57.358 50.000 0.00 0.00 0.00 4.12
3299 3591 1.867363 TTAGCCTCTCTCTCCCCAAC 58.133 55.000 0.00 0.00 0.00 3.77
3300 3592 1.011595 TAGCCTCTCTCTCCCCAACT 58.988 55.000 0.00 0.00 0.00 3.16
3301 3593 0.118144 AGCCTCTCTCTCCCCAACTT 59.882 55.000 0.00 0.00 0.00 2.66
3302 3594 0.539518 GCCTCTCTCTCCCCAACTTC 59.460 60.000 0.00 0.00 0.00 3.01
3303 3595 1.899438 GCCTCTCTCTCCCCAACTTCT 60.899 57.143 0.00 0.00 0.00 2.85
3304 3596 2.545810 CCTCTCTCTCCCCAACTTCTT 58.454 52.381 0.00 0.00 0.00 2.52
3305 3597 2.909662 CCTCTCTCTCCCCAACTTCTTT 59.090 50.000 0.00 0.00 0.00 2.52
3306 3598 3.329225 CCTCTCTCTCCCCAACTTCTTTT 59.671 47.826 0.00 0.00 0.00 2.27
3307 3599 4.532521 CCTCTCTCTCCCCAACTTCTTTTA 59.467 45.833 0.00 0.00 0.00 1.52
3308 3600 5.337975 CCTCTCTCTCCCCAACTTCTTTTAG 60.338 48.000 0.00 0.00 0.00 1.85
3309 3601 4.020128 TCTCTCTCCCCAACTTCTTTTAGC 60.020 45.833 0.00 0.00 0.00 3.09
3310 3602 3.009143 TCTCTCCCCAACTTCTTTTAGCC 59.991 47.826 0.00 0.00 0.00 3.93
3311 3603 2.986728 TCTCCCCAACTTCTTTTAGCCT 59.013 45.455 0.00 0.00 0.00 4.58
3312 3604 3.009143 TCTCCCCAACTTCTTTTAGCCTC 59.991 47.826 0.00 0.00 0.00 4.70
3313 3605 2.986728 TCCCCAACTTCTTTTAGCCTCT 59.013 45.455 0.00 0.00 0.00 3.69
3314 3606 3.009143 TCCCCAACTTCTTTTAGCCTCTC 59.991 47.826 0.00 0.00 0.00 3.20
3315 3607 3.009584 CCCCAACTTCTTTTAGCCTCTCT 59.990 47.826 0.00 0.00 0.00 3.10
3316 3608 4.257731 CCCAACTTCTTTTAGCCTCTCTC 58.742 47.826 0.00 0.00 0.00 3.20
3317 3609 4.019771 CCCAACTTCTTTTAGCCTCTCTCT 60.020 45.833 0.00 0.00 0.00 3.10
3318 3610 5.513962 CCCAACTTCTTTTAGCCTCTCTCTT 60.514 44.000 0.00 0.00 0.00 2.85
3319 3611 6.000840 CCAACTTCTTTTAGCCTCTCTCTTT 58.999 40.000 0.00 0.00 0.00 2.52
3320 3612 6.148645 CCAACTTCTTTTAGCCTCTCTCTTTC 59.851 42.308 0.00 0.00 0.00 2.62
3321 3613 6.680148 ACTTCTTTTAGCCTCTCTCTTTCT 57.320 37.500 0.00 0.00 0.00 2.52
3322 3614 6.697395 ACTTCTTTTAGCCTCTCTCTTTCTC 58.303 40.000 0.00 0.00 0.00 2.87
3323 3615 5.669164 TCTTTTAGCCTCTCTCTTTCTCC 57.331 43.478 0.00 0.00 0.00 3.71
3387 3684 6.223120 ACTCATATTTGGAGCCAAACAAAAC 58.777 36.000 16.28 0.00 46.80 2.43
3438 3735 4.939052 ACATAATCTTGTACTCCCTCCG 57.061 45.455 0.00 0.00 0.00 4.63
3442 3739 0.324091 TCTTGTACTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46
3450 3747 3.173965 ACTCCCTCCGTCCCATAATATG 58.826 50.000 0.00 0.00 0.00 1.78
3458 3755 5.637127 TCCGTCCCATAATATGAGAGTGTA 58.363 41.667 1.10 0.00 0.00 2.90
3461 3758 7.891712 TCCGTCCCATAATATGAGAGTGTATTA 59.108 37.037 1.10 0.00 0.00 0.98
3462 3759 7.974501 CCGTCCCATAATATGAGAGTGTATTAC 59.025 40.741 1.10 0.00 0.00 1.89
3564 3861 7.979537 ACAGTAAATGTCGAAGTAGCATAATCA 59.020 33.333 0.00 0.00 37.75 2.57
3589 3906 7.646130 CAGCAATTTTTAACCGAGTTGAAGTTA 59.354 33.333 0.23 0.00 0.00 2.24
3607 3957 6.655003 TGAAGTTACTCCAATTCTTGATGTCC 59.345 38.462 0.00 0.00 0.00 4.02
3715 4071 0.042188 CCAACTGCGACGTTGAAGTG 60.042 55.000 17.62 11.03 45.40 3.16
3736 4092 0.390735 ATCCGCCGTCCACACTTAAC 60.391 55.000 0.00 0.00 0.00 2.01
3772 4129 2.229784 GCCCAAGAAACAATCAGACCTG 59.770 50.000 0.00 0.00 0.00 4.00
3835 4203 1.922570 CGTAGGTGCATAGCGTCTTT 58.077 50.000 0.00 0.00 0.00 2.52
3836 4204 1.588404 CGTAGGTGCATAGCGTCTTTG 59.412 52.381 0.00 0.00 0.00 2.77
3837 4205 1.327764 GTAGGTGCATAGCGTCTTTGC 59.672 52.381 12.68 12.68 38.54 3.68
3852 4227 5.334879 GCGTCTTTGCTTTCTTCATTTAGGA 60.335 40.000 0.00 0.00 0.00 2.94
3893 4269 4.007659 ACTATGCTTTTGTTTAGGTCCCG 58.992 43.478 0.00 0.00 0.00 5.14
3971 4353 6.076981 ACCTTGCAACACTAGATTCTTTTG 57.923 37.500 0.00 0.00 0.00 2.44
3973 4355 6.096846 ACCTTGCAACACTAGATTCTTTTGTT 59.903 34.615 0.00 6.73 0.00 2.83
3974 4356 6.418819 CCTTGCAACACTAGATTCTTTTGTTG 59.581 38.462 23.27 23.27 46.40 3.33
3975 4357 5.830912 TGCAACACTAGATTCTTTTGTTGG 58.169 37.500 25.94 15.85 44.68 3.77
3984 4366 4.881273 AGATTCTTTTGTTGGTTTTTGCCC 59.119 37.500 0.00 0.00 0.00 5.36
4003 4385 3.070159 GCCCACTTCATAGTCTCAGCATA 59.930 47.826 0.00 0.00 30.26 3.14
4010 4392 7.922811 CACTTCATAGTCTCAGCATATGTACAA 59.077 37.037 0.00 0.00 30.26 2.41
4028 4416 0.038744 AAGACAGTGGGAATGGCCTG 59.961 55.000 3.32 0.00 36.66 4.85
4055 4443 1.066257 AGACGCACGGTAACACGTT 59.934 52.632 0.00 0.00 46.25 3.99
4056 4444 0.310543 AGACGCACGGTAACACGTTA 59.689 50.000 0.00 0.00 46.25 3.18
4057 4445 0.430858 GACGCACGGTAACACGTTAC 59.569 55.000 10.92 10.92 46.25 2.50
4058 4446 0.248825 ACGCACGGTAACACGTTACA 60.249 50.000 18.93 0.00 46.25 2.41
4059 4447 0.159345 CGCACGGTAACACGTTACAC 59.841 55.000 18.93 9.44 46.25 2.90
4060 4448 0.159345 GCACGGTAACACGTTACACG 59.841 55.000 18.93 19.49 46.25 4.49
4122 4512 4.647399 ACCTCACTAGCTATTCTCCAGAAC 59.353 45.833 0.00 0.00 36.80 3.01
4125 4515 4.646945 TCACTAGCTATTCTCCAGAACCAG 59.353 45.833 0.00 0.00 36.80 4.00
4127 4517 5.127845 CACTAGCTATTCTCCAGAACCAGAA 59.872 44.000 0.00 0.00 36.80 3.02
4128 4518 4.751767 AGCTATTCTCCAGAACCAGAAG 57.248 45.455 0.00 0.00 36.80 2.85
4129 4519 3.118445 AGCTATTCTCCAGAACCAGAAGC 60.118 47.826 0.00 0.00 36.80 3.86
4130 4520 3.369892 GCTATTCTCCAGAACCAGAAGCA 60.370 47.826 0.00 0.00 36.80 3.91
4131 4521 3.795688 ATTCTCCAGAACCAGAAGCAA 57.204 42.857 0.00 0.00 36.80 3.91
4132 4522 3.576078 TTCTCCAGAACCAGAAGCAAA 57.424 42.857 0.00 0.00 0.00 3.68
4133 4523 3.131709 TCTCCAGAACCAGAAGCAAAG 57.868 47.619 0.00 0.00 0.00 2.77
4148 4630 0.727398 CAAAGTAGCTAGGTTGGCGC 59.273 55.000 0.00 0.00 34.52 6.53
4149 4631 0.739813 AAAGTAGCTAGGTTGGCGCG 60.740 55.000 0.00 0.00 34.52 6.86
4150 4632 2.573609 AAGTAGCTAGGTTGGCGCGG 62.574 60.000 8.83 0.00 34.52 6.46
4229 4711 7.360353 CGACAATCAGCTCTCTTGTCAATTAAA 60.360 37.037 22.58 0.00 45.71 1.52
4230 4712 8.169977 ACAATCAGCTCTCTTGTCAATTAAAA 57.830 30.769 0.00 0.00 0.00 1.52
4252 4734 0.103390 TGTCACGTTCTTCCTGCGAA 59.897 50.000 0.00 0.00 0.00 4.70
4299 4781 1.070134 CGACTTTTCTCTGACACCCCA 59.930 52.381 0.00 0.00 0.00 4.96
4300 4782 2.495084 GACTTTTCTCTGACACCCCAC 58.505 52.381 0.00 0.00 0.00 4.61
4301 4783 1.143073 ACTTTTCTCTGACACCCCACC 59.857 52.381 0.00 0.00 0.00 4.61
4302 4784 0.476771 TTTTCTCTGACACCCCACCC 59.523 55.000 0.00 0.00 0.00 4.61
4303 4785 0.401395 TTTCTCTGACACCCCACCCT 60.401 55.000 0.00 0.00 0.00 4.34
4367 4849 3.411446 TGACGAAAAACAGAGCATCCAT 58.589 40.909 0.00 0.00 33.66 3.41
4400 4884 2.021457 TCGAATACATCTGGCTCACGA 58.979 47.619 0.00 0.00 0.00 4.35
4484 4968 5.049954 GCCTTTACGTTGACAAACACTGATA 60.050 40.000 0.00 0.00 35.94 2.15
4649 5136 5.943706 ATGCACTAGTACTATACTCCGTG 57.056 43.478 2.33 8.04 40.42 4.94
4695 5182 5.384063 TTTTGATAACCGTACTCCGTGTA 57.616 39.130 0.00 0.00 33.66 2.90
4698 5185 4.765273 TGATAACCGTACTCCGTGTACTA 58.235 43.478 12.13 2.01 46.89 1.82
4699 5186 4.570772 TGATAACCGTACTCCGTGTACTAC 59.429 45.833 12.13 0.00 46.89 2.73
4700 5187 2.770164 ACCGTACTCCGTGTACTACT 57.230 50.000 12.13 0.00 46.89 2.57
4764 5302 3.332919 GTCGCCCTCTCGTGTAGATATA 58.667 50.000 0.00 0.00 32.41 0.86
4765 5303 3.940221 GTCGCCCTCTCGTGTAGATATAT 59.060 47.826 0.00 0.00 32.41 0.86
4809 5530 5.615289 ACATGTAAATATCTCCAGCTGACC 58.385 41.667 17.39 0.00 0.00 4.02
4825 5546 2.230508 CTGACCAGCATGCATTTTGTCT 59.769 45.455 21.98 0.00 31.97 3.41
4826 5547 2.029739 TGACCAGCATGCATTTTGTCTG 60.030 45.455 21.98 6.39 31.97 3.51
4827 5548 2.229543 GACCAGCATGCATTTTGTCTGA 59.770 45.455 21.98 0.00 31.97 3.27
4828 5549 2.029649 ACCAGCATGCATTTTGTCTGAC 60.030 45.455 21.98 0.00 31.97 3.51
4869 5590 3.009115 GCCAGCCACCTACCAGGA 61.009 66.667 0.00 0.00 37.67 3.86
4893 5614 4.143514 CGAACAGACAACGAGATCAAGAAC 60.144 45.833 0.00 0.00 0.00 3.01
4932 5653 1.002134 CCGGCAGATCCACACCTTT 60.002 57.895 0.00 0.00 34.01 3.11
4935 5656 0.036388 GGCAGATCCACACCTTTCGA 60.036 55.000 0.00 0.00 34.01 3.71
5280 6001 1.410882 GACCCTGTAGATCAGACTGGC 59.589 57.143 14.63 0.00 46.27 4.85
5627 6348 1.086634 GCGTGCTGAGAAGATCCCAC 61.087 60.000 0.00 0.00 0.00 4.61
5845 6576 1.689273 GTAGTGGGGATCTGCTAGGTG 59.311 57.143 0.00 0.00 0.00 4.00
5847 6578 0.912486 GTGGGGATCTGCTAGGTGTT 59.088 55.000 0.00 0.00 0.00 3.32
5922 6653 5.748630 GTGAAATGAACCTTTGAGTTGAACC 59.251 40.000 0.00 0.00 0.00 3.62
5935 6672 1.071698 GTTGAACCGTTCGAGTTCGTG 60.072 52.381 6.78 3.79 45.33 4.35
5949 6686 1.002033 GTTCGTGTCCGACTGTACACT 60.002 52.381 9.80 0.00 44.13 3.55
5959 6696 3.542690 CGACTGTACACTATTCGGATCG 58.457 50.000 0.00 0.00 0.00 3.69
5994 6731 6.119536 ACAAGGAAAAGGATATGTATTGCGA 58.880 36.000 0.00 0.00 0.00 5.10
6011 6748 1.152989 CGAGCCAGCAGAGCAAGATC 61.153 60.000 0.00 0.00 0.00 2.75
6044 6781 1.005867 GTCAACCACGGGTAAGCGA 60.006 57.895 0.00 0.00 33.12 4.93
6063 6800 0.399454 AATGCAGTGAGCCAGTGACT 59.601 50.000 12.53 0.00 44.83 3.41
6084 6821 6.000246 ACTAGAGAGTCTCATGATCAGTGA 58.000 41.667 22.05 0.00 32.06 3.41
6099 6836 4.160736 TCAGTGACGATTCTACACACAG 57.839 45.455 0.00 0.00 37.05 3.66
6124 6861 2.515901 GGCCAGTGACCCACAACT 59.484 61.111 0.00 0.00 36.74 3.16
6125 6862 1.152756 GGCCAGTGACCCACAACTT 60.153 57.895 0.00 0.00 36.74 2.66
6126 6863 0.755327 GGCCAGTGACCCACAACTTT 60.755 55.000 0.00 0.00 36.74 2.66
6127 6864 1.111277 GCCAGTGACCCACAACTTTT 58.889 50.000 0.00 0.00 36.74 2.27
6128 6865 1.202405 GCCAGTGACCCACAACTTTTG 60.202 52.381 0.00 0.00 36.74 2.44
6129 6866 1.408702 CCAGTGACCCACAACTTTTGG 59.591 52.381 0.00 0.00 36.74 3.28
6130 6867 2.374184 CAGTGACCCACAACTTTTGGA 58.626 47.619 0.00 0.00 36.74 3.53
6131 6868 2.757868 CAGTGACCCACAACTTTTGGAA 59.242 45.455 0.00 0.00 36.74 3.53
6132 6869 3.194542 CAGTGACCCACAACTTTTGGAAA 59.805 43.478 0.00 0.00 36.74 3.13
6133 6870 3.835395 AGTGACCCACAACTTTTGGAAAA 59.165 39.130 0.00 0.00 36.74 2.29
6134 6871 4.469586 AGTGACCCACAACTTTTGGAAAAT 59.530 37.500 0.00 0.00 36.74 1.82
6135 6872 4.808895 GTGACCCACAACTTTTGGAAAATC 59.191 41.667 0.00 0.00 36.02 2.17
6136 6873 4.467795 TGACCCACAACTTTTGGAAAATCA 59.532 37.500 0.00 0.00 36.02 2.57
6137 6874 5.130145 TGACCCACAACTTTTGGAAAATCAT 59.870 36.000 0.00 0.00 36.02 2.45
6138 6875 6.000246 ACCCACAACTTTTGGAAAATCATT 58.000 33.333 0.00 0.00 36.02 2.57
6139 6876 6.054941 ACCCACAACTTTTGGAAAATCATTC 58.945 36.000 0.00 0.00 36.02 2.67
6140 6877 5.469760 CCCACAACTTTTGGAAAATCATTCC 59.530 40.000 0.22 0.22 36.02 3.01
6141 6878 6.054295 CCACAACTTTTGGAAAATCATTCCA 58.946 36.000 5.83 5.83 46.08 3.53
6169 6906 2.347490 GGTTCGGCTCCTCTGCAA 59.653 61.111 0.00 0.00 34.04 4.08
6271 7008 9.189156 CCTTAATCCTGTTAATCAATGGAAAGA 57.811 33.333 0.00 0.00 0.00 2.52
6309 7046 2.358003 GCTGCACTGCTTCGTCCT 60.358 61.111 1.98 0.00 0.00 3.85
6310 7047 1.963338 GCTGCACTGCTTCGTCCTT 60.963 57.895 1.98 0.00 0.00 3.36
6334 7072 4.899239 CCGTCGGAGGCCTGATGC 62.899 72.222 12.00 0.00 34.15 3.91
6428 8779 1.550524 CAAGTTGATCGAGGAGGTGGA 59.449 52.381 0.00 0.00 0.00 4.02
6460 8811 2.041115 GGTGGCGGAAGGAAGAAGC 61.041 63.158 0.00 0.00 0.00 3.86
6478 8830 0.955428 GCCGATGCTTTGACAGGACA 60.955 55.000 0.00 0.00 33.53 4.02
6482 8834 3.430790 CCGATGCTTTGACAGGACAGATA 60.431 47.826 0.00 0.00 0.00 1.98
6483 8835 3.801050 CGATGCTTTGACAGGACAGATAG 59.199 47.826 0.00 0.00 0.00 2.08
6501 8853 5.990996 CAGATAGGAAGAAATGAGAGCCTTC 59.009 44.000 0.00 0.00 35.52 3.46
6513 8865 3.960755 TGAGAGCCTTCCGATGAGATTAA 59.039 43.478 0.00 0.00 0.00 1.40
6514 8866 4.405680 TGAGAGCCTTCCGATGAGATTAAA 59.594 41.667 0.00 0.00 0.00 1.52
6515 8867 4.698575 AGAGCCTTCCGATGAGATTAAAC 58.301 43.478 0.00 0.00 0.00 2.01
6516 8868 3.458189 AGCCTTCCGATGAGATTAAACG 58.542 45.455 0.00 0.00 0.00 3.60
6517 8869 2.544267 GCCTTCCGATGAGATTAAACGG 59.456 50.000 0.00 0.00 44.09 4.44
6518 8870 3.793559 CCTTCCGATGAGATTAAACGGT 58.206 45.455 0.00 0.00 43.36 4.83
6519 8871 3.555956 CCTTCCGATGAGATTAAACGGTG 59.444 47.826 0.00 0.00 43.36 4.94
6520 8872 3.173668 TCCGATGAGATTAAACGGTGG 57.826 47.619 0.00 0.00 43.36 4.61
6521 8873 2.761767 TCCGATGAGATTAAACGGTGGA 59.238 45.455 0.00 0.00 43.36 4.02
6522 8874 3.386726 TCCGATGAGATTAAACGGTGGAT 59.613 43.478 0.00 0.00 43.36 3.41
6523 8875 4.127171 CCGATGAGATTAAACGGTGGATT 58.873 43.478 0.00 0.00 38.97 3.01
6524 8876 4.024893 CCGATGAGATTAAACGGTGGATTG 60.025 45.833 0.00 0.00 38.97 2.67
6525 8877 4.570772 CGATGAGATTAAACGGTGGATTGT 59.429 41.667 0.00 0.00 0.00 2.71
6526 8878 5.502382 CGATGAGATTAAACGGTGGATTGTG 60.502 44.000 0.00 0.00 0.00 3.33
6527 8879 3.438781 TGAGATTAAACGGTGGATTGTGC 59.561 43.478 0.00 0.00 0.00 4.57
6528 8880 3.417101 AGATTAAACGGTGGATTGTGCA 58.583 40.909 0.00 0.00 0.00 4.57
6529 8881 3.823873 AGATTAAACGGTGGATTGTGCAA 59.176 39.130 0.00 0.00 0.00 4.08
6530 8882 3.634568 TTAAACGGTGGATTGTGCAAG 57.365 42.857 0.00 0.00 0.00 4.01
6531 8883 1.398692 AAACGGTGGATTGTGCAAGT 58.601 45.000 0.00 0.00 0.00 3.16
6532 8884 2.264005 AACGGTGGATTGTGCAAGTA 57.736 45.000 0.00 0.00 0.00 2.24
6533 8885 2.489938 ACGGTGGATTGTGCAAGTAT 57.510 45.000 0.00 0.00 0.00 2.12
6534 8886 2.356135 ACGGTGGATTGTGCAAGTATC 58.644 47.619 0.00 0.00 0.00 2.24
6535 8887 2.027192 ACGGTGGATTGTGCAAGTATCT 60.027 45.455 0.00 0.00 0.00 1.98
6536 8888 2.352651 CGGTGGATTGTGCAAGTATCTG 59.647 50.000 0.00 0.00 0.00 2.90
6537 8889 3.347216 GGTGGATTGTGCAAGTATCTGT 58.653 45.455 0.00 0.00 0.00 3.41
6538 8890 4.513442 GGTGGATTGTGCAAGTATCTGTA 58.487 43.478 0.00 0.00 0.00 2.74
6539 8891 4.332819 GGTGGATTGTGCAAGTATCTGTAC 59.667 45.833 0.00 0.00 33.04 2.90
6540 8892 4.332819 GTGGATTGTGCAAGTATCTGTACC 59.667 45.833 0.00 0.00 31.55 3.34
6541 8893 3.555956 GGATTGTGCAAGTATCTGTACCG 59.444 47.826 0.00 0.00 31.55 4.02
6542 8894 2.665649 TGTGCAAGTATCTGTACCGG 57.334 50.000 0.00 0.00 31.55 5.28
6543 8895 1.897133 TGTGCAAGTATCTGTACCGGT 59.103 47.619 13.98 13.98 31.55 5.28
6544 8896 2.268298 GTGCAAGTATCTGTACCGGTG 58.732 52.381 19.93 0.00 0.00 4.94
6545 8897 1.897133 TGCAAGTATCTGTACCGGTGT 59.103 47.619 19.93 0.14 0.00 4.16
6546 8898 3.090790 TGCAAGTATCTGTACCGGTGTA 58.909 45.455 19.93 4.71 0.00 2.90
6547 8899 3.129813 TGCAAGTATCTGTACCGGTGTAG 59.870 47.826 19.93 15.34 0.00 2.74
6548 8900 3.129988 GCAAGTATCTGTACCGGTGTAGT 59.870 47.826 19.93 8.47 0.00 2.73
6549 8901 4.336433 GCAAGTATCTGTACCGGTGTAGTA 59.664 45.833 19.93 7.56 0.00 1.82
6550 8902 5.163622 GCAAGTATCTGTACCGGTGTAGTAA 60.164 44.000 19.93 5.26 0.00 2.24
6551 8903 6.460676 GCAAGTATCTGTACCGGTGTAGTAAT 60.461 42.308 19.93 8.16 0.00 1.89
6552 8904 7.255242 GCAAGTATCTGTACCGGTGTAGTAATA 60.255 40.741 19.93 7.21 0.00 0.98
6553 8905 8.623903 CAAGTATCTGTACCGGTGTAGTAATAA 58.376 37.037 19.93 0.00 0.00 1.40
6554 8906 8.159344 AGTATCTGTACCGGTGTAGTAATAAC 57.841 38.462 19.93 4.11 0.00 1.89
6555 8907 7.775093 AGTATCTGTACCGGTGTAGTAATAACA 59.225 37.037 19.93 9.22 0.00 2.41
6556 8908 7.592885 ATCTGTACCGGTGTAGTAATAACAT 57.407 36.000 19.93 0.12 0.00 2.71
6557 8909 6.798482 TCTGTACCGGTGTAGTAATAACATG 58.202 40.000 19.93 4.66 0.00 3.21
6558 8910 6.602803 TCTGTACCGGTGTAGTAATAACATGA 59.397 38.462 19.93 6.85 0.00 3.07
6559 8911 6.563422 TGTACCGGTGTAGTAATAACATGAC 58.437 40.000 19.93 1.17 0.00 3.06
6560 8912 5.927281 ACCGGTGTAGTAATAACATGACT 57.073 39.130 6.12 0.00 0.00 3.41
6561 8913 5.657474 ACCGGTGTAGTAATAACATGACTG 58.343 41.667 6.12 0.00 0.00 3.51
6562 8914 5.186409 ACCGGTGTAGTAATAACATGACTGT 59.814 40.000 6.12 0.00 37.12 3.55
6563 8915 6.377996 ACCGGTGTAGTAATAACATGACTGTA 59.622 38.462 6.12 0.00 33.36 2.74
6564 8916 6.694411 CCGGTGTAGTAATAACATGACTGTAC 59.306 42.308 0.00 0.00 33.36 2.90
6565 8917 6.412943 CGGTGTAGTAATAACATGACTGTACG 59.587 42.308 0.00 0.00 33.36 3.67
6566 8918 7.475015 GGTGTAGTAATAACATGACTGTACGA 58.525 38.462 0.00 0.00 33.36 3.43
6567 8919 7.430502 GGTGTAGTAATAACATGACTGTACGAC 59.569 40.741 0.00 4.05 33.36 4.34
6568 8920 8.180267 GTGTAGTAATAACATGACTGTACGACT 58.820 37.037 0.00 0.00 33.36 4.18
6569 8921 9.382275 TGTAGTAATAACATGACTGTACGACTA 57.618 33.333 0.00 0.00 33.36 2.59
6570 8922 9.861138 GTAGTAATAACATGACTGTACGACTAG 57.139 37.037 0.00 0.00 33.36 2.57
6571 8923 7.416022 AGTAATAACATGACTGTACGACTAGC 58.584 38.462 0.00 0.00 33.36 3.42
6572 8924 3.505464 AACATGACTGTACGACTAGCC 57.495 47.619 0.00 0.00 33.36 3.93
6573 8925 2.443416 ACATGACTGTACGACTAGCCA 58.557 47.619 0.00 0.00 32.49 4.75
6574 8926 2.163815 ACATGACTGTACGACTAGCCAC 59.836 50.000 0.00 0.00 32.49 5.01
6575 8927 1.900245 TGACTGTACGACTAGCCACA 58.100 50.000 0.00 0.00 0.00 4.17
6576 8928 1.810755 TGACTGTACGACTAGCCACAG 59.189 52.381 10.43 10.43 43.21 3.66
6577 8929 1.906990 ACTGTACGACTAGCCACAGT 58.093 50.000 11.42 11.42 45.08 3.55
6578 8930 2.264109 CTGTACGACTAGCCACAGTG 57.736 55.000 0.00 0.00 34.91 3.66
6579 8931 0.885879 TGTACGACTAGCCACAGTGG 59.114 55.000 16.16 16.16 41.55 4.00
6580 8932 0.172803 GTACGACTAGCCACAGTGGG 59.827 60.000 21.77 7.25 38.19 4.61
6581 8933 0.038599 TACGACTAGCCACAGTGGGA 59.961 55.000 21.77 0.00 38.19 4.37
6582 8934 1.251527 ACGACTAGCCACAGTGGGAG 61.252 60.000 21.77 7.23 38.19 4.30
6583 8935 1.251527 CGACTAGCCACAGTGGGAGT 61.252 60.000 21.77 2.87 38.19 3.85
6584 8936 1.848652 GACTAGCCACAGTGGGAGTA 58.151 55.000 21.77 0.00 38.19 2.59
6585 8937 2.389715 GACTAGCCACAGTGGGAGTAT 58.610 52.381 21.77 0.00 38.19 2.12
6586 8938 2.362717 GACTAGCCACAGTGGGAGTATC 59.637 54.545 21.77 3.06 38.19 2.24
6587 8939 2.023888 ACTAGCCACAGTGGGAGTATCT 60.024 50.000 21.77 10.69 38.19 1.98
6588 8940 1.958288 AGCCACAGTGGGAGTATCTT 58.042 50.000 21.77 0.00 38.19 2.40
6589 8941 1.834263 AGCCACAGTGGGAGTATCTTC 59.166 52.381 21.77 0.78 38.19 2.87
6590 8942 1.471676 GCCACAGTGGGAGTATCTTCG 60.472 57.143 21.77 0.00 38.19 3.79
6591 8943 1.137086 CCACAGTGGGAGTATCTTCGG 59.863 57.143 12.40 0.00 32.67 4.30
6592 8944 1.825474 CACAGTGGGAGTATCTTCGGT 59.175 52.381 0.00 0.00 33.73 4.69
6593 8945 3.021695 CACAGTGGGAGTATCTTCGGTA 58.978 50.000 0.00 0.00 33.73 4.02
6594 8946 3.066900 CACAGTGGGAGTATCTTCGGTAG 59.933 52.174 0.00 0.00 33.73 3.18
6595 8947 3.288964 CAGTGGGAGTATCTTCGGTAGT 58.711 50.000 0.00 0.00 33.73 2.73
6596 8948 4.080129 ACAGTGGGAGTATCTTCGGTAGTA 60.080 45.833 0.00 0.00 33.73 1.82
6597 8949 4.885907 CAGTGGGAGTATCTTCGGTAGTAA 59.114 45.833 0.00 0.00 33.73 2.24
6598 8950 4.886489 AGTGGGAGTATCTTCGGTAGTAAC 59.114 45.833 0.00 0.00 33.73 2.50
6599 8951 4.641989 GTGGGAGTATCTTCGGTAGTAACA 59.358 45.833 0.00 0.00 33.73 2.41
6600 8952 5.301298 GTGGGAGTATCTTCGGTAGTAACAT 59.699 44.000 0.00 0.00 33.73 2.71
6601 8953 5.533903 TGGGAGTATCTTCGGTAGTAACATC 59.466 44.000 0.00 0.00 33.73 3.06
6602 8954 5.334724 GGGAGTATCTTCGGTAGTAACATCG 60.335 48.000 0.00 0.00 33.73 3.84
6603 8955 5.468072 GGAGTATCTTCGGTAGTAACATCGA 59.532 44.000 0.00 0.00 33.73 3.59
6604 8956 6.347563 GGAGTATCTTCGGTAGTAACATCGAG 60.348 46.154 0.00 0.00 33.73 4.04
6605 8957 6.054295 AGTATCTTCGGTAGTAACATCGAGT 58.946 40.000 0.00 0.00 33.11 4.18
6606 8958 4.871993 TCTTCGGTAGTAACATCGAGTC 57.128 45.455 0.00 0.00 33.11 3.36
6607 8959 3.624861 TCTTCGGTAGTAACATCGAGTCC 59.375 47.826 0.00 0.00 33.11 3.85
6608 8960 2.989909 TCGGTAGTAACATCGAGTCCA 58.010 47.619 0.00 0.00 0.00 4.02
6609 8961 3.346315 TCGGTAGTAACATCGAGTCCAA 58.654 45.455 0.00 0.00 0.00 3.53
6610 8962 3.127548 TCGGTAGTAACATCGAGTCCAAC 59.872 47.826 0.00 0.00 0.00 3.77
6611 8963 3.733077 CGGTAGTAACATCGAGTCCAACC 60.733 52.174 0.00 0.00 0.00 3.77
6612 8964 3.429960 GGTAGTAACATCGAGTCCAACCC 60.430 52.174 0.00 0.00 0.00 4.11
6613 8965 2.253610 AGTAACATCGAGTCCAACCCA 58.746 47.619 0.00 0.00 0.00 4.51
6614 8966 2.635915 AGTAACATCGAGTCCAACCCAA 59.364 45.455 0.00 0.00 0.00 4.12
6615 8967 2.879103 AACATCGAGTCCAACCCAAT 57.121 45.000 0.00 0.00 0.00 3.16
6616 8968 3.992943 AACATCGAGTCCAACCCAATA 57.007 42.857 0.00 0.00 0.00 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.546829 ATGGTAAAGCGAGTTGTTCCTA 57.453 40.909 0.00 0.00 0.00 2.94
2 3 3.424433 CGAATGGTAAAGCGAGTTGTTCC 60.424 47.826 0.00 0.00 0.00 3.62
47 48 5.646606 CGAGTTGTTCCTTTTCCTTTTTGA 58.353 37.500 0.00 0.00 0.00 2.69
48 49 4.267690 GCGAGTTGTTCCTTTTCCTTTTTG 59.732 41.667 0.00 0.00 0.00 2.44
50 51 3.699538 AGCGAGTTGTTCCTTTTCCTTTT 59.300 39.130 0.00 0.00 0.00 2.27
52 53 2.932261 AGCGAGTTGTTCCTTTTCCTT 58.068 42.857 0.00 0.00 0.00 3.36
53 54 2.640316 AGCGAGTTGTTCCTTTTCCT 57.360 45.000 0.00 0.00 0.00 3.36
54 55 3.710326 AAAGCGAGTTGTTCCTTTTCC 57.290 42.857 0.00 0.00 0.00 3.13
55 56 5.758924 ACATAAAGCGAGTTGTTCCTTTTC 58.241 37.500 0.00 0.00 32.31 2.29
56 57 5.767816 ACATAAAGCGAGTTGTTCCTTTT 57.232 34.783 0.00 0.00 32.31 2.27
57 58 5.767816 AACATAAAGCGAGTTGTTCCTTT 57.232 34.783 0.00 0.00 33.62 3.11
58 59 5.767816 AAACATAAAGCGAGTTGTTCCTT 57.232 34.783 0.00 0.00 31.42 3.36
59 60 6.567891 GCTTAAACATAAAGCGAGTTGTTCCT 60.568 38.462 0.00 0.00 39.92 3.36
60 61 5.567915 GCTTAAACATAAAGCGAGTTGTTCC 59.432 40.000 0.00 0.00 39.92 3.62
61 62 6.598176 GCTTAAACATAAAGCGAGTTGTTC 57.402 37.500 0.00 0.00 39.92 3.18
90 91 9.393786 AGGACTTTGTATCCCTATACACATTAT 57.606 33.333 0.00 0.00 45.97 1.28
97 98 7.016268 TCCATGAAGGACTTTGTATCCCTATAC 59.984 40.741 0.00 0.00 43.07 1.47
131 132 1.046472 TGTTGGACGTCTGGTCTGGT 61.046 55.000 16.46 0.00 45.35 4.00
169 170 9.388506 TCTACTACTTACAAACTAACTCGCTAT 57.611 33.333 0.00 0.00 0.00 2.97
179 180 6.814506 TCGAGCTTCTACTACTTACAAACT 57.185 37.500 0.00 0.00 0.00 2.66
182 183 5.391310 CCGTTCGAGCTTCTACTACTTACAA 60.391 44.000 0.00 0.00 0.00 2.41
183 184 4.093998 CCGTTCGAGCTTCTACTACTTACA 59.906 45.833 0.00 0.00 0.00 2.41
184 185 4.495514 CCCGTTCGAGCTTCTACTACTTAC 60.496 50.000 0.00 0.00 0.00 2.34
185 186 3.624861 CCCGTTCGAGCTTCTACTACTTA 59.375 47.826 0.00 0.00 0.00 2.24
186 187 2.422832 CCCGTTCGAGCTTCTACTACTT 59.577 50.000 0.00 0.00 0.00 2.24
187 188 2.015587 CCCGTTCGAGCTTCTACTACT 58.984 52.381 0.00 0.00 0.00 2.57
188 189 1.065251 CCCCGTTCGAGCTTCTACTAC 59.935 57.143 0.00 0.00 0.00 2.73
189 190 1.065199 TCCCCGTTCGAGCTTCTACTA 60.065 52.381 0.00 0.00 0.00 1.82
207 208 4.340381 TGGTTAGCTCGTACCTAATCTTCC 59.660 45.833 12.27 0.00 35.41 3.46
216 217 1.547372 TCCTGTTGGTTAGCTCGTACC 59.453 52.381 0.00 0.00 34.93 3.34
217 218 3.057033 TCTTCCTGTTGGTTAGCTCGTAC 60.057 47.826 0.00 0.00 34.23 3.67
218 219 3.159472 TCTTCCTGTTGGTTAGCTCGTA 58.841 45.455 0.00 0.00 34.23 3.43
219 220 1.968493 TCTTCCTGTTGGTTAGCTCGT 59.032 47.619 0.00 0.00 34.23 4.18
253 254 2.004583 TTTCAGTACGCTTCCCGATG 57.995 50.000 0.00 0.00 41.02 3.84
274 275 1.069935 GTGGAGGGCTAATCGGCTC 59.930 63.158 0.00 0.00 38.46 4.70
322 324 1.751924 ACTGCCTCGAGTAGATGAACC 59.248 52.381 17.72 0.00 31.60 3.62
373 375 5.292101 CGAAATCTCTGTTTACCATCTGACC 59.708 44.000 0.00 0.00 0.00 4.02
473 475 2.985282 TCCGGCGACCACGTAGTT 60.985 61.111 9.30 0.00 41.61 2.24
619 621 1.484240 AGGAGGAGCGTACTACGTAGT 59.516 52.381 29.62 29.62 44.73 2.73
631 633 2.435422 GGTATACGTAGGAGGAGGAGC 58.565 57.143 0.08 0.00 0.00 4.70
632 634 2.697654 CGGTATACGTAGGAGGAGGAG 58.302 57.143 0.08 0.00 37.93 3.69
633 635 1.271054 GCGGTATACGTAGGAGGAGGA 60.271 57.143 0.08 0.00 46.52 3.71
635 637 1.163554 GGCGGTATACGTAGGAGGAG 58.836 60.000 0.08 0.00 46.52 3.69
636 638 0.250901 GGGCGGTATACGTAGGAGGA 60.251 60.000 0.08 0.00 46.52 3.71
683 685 3.515502 AGAAGAGGCGCCATAATATAGCA 59.484 43.478 31.54 0.00 0.00 3.49
700 702 2.664851 CGCACGGTGGCAAGAAGA 60.665 61.111 10.60 0.00 0.00 2.87
701 703 2.972505 ACGCACGGTGGCAAGAAG 60.973 61.111 10.60 0.00 0.00 2.85
702 704 3.276091 CACGCACGGTGGCAAGAA 61.276 61.111 10.60 0.00 43.16 2.52
739 741 2.507944 CCTGATCTCTTGGGGGCG 59.492 66.667 0.00 0.00 0.00 6.13
740 742 2.922234 CCCTGATCTCTTGGGGGC 59.078 66.667 0.00 0.00 37.37 5.80
741 743 2.761465 GGCCCTGATCTCTTGGGGG 61.761 68.421 12.95 0.00 41.19 5.40
742 744 2.922234 GGCCCTGATCTCTTGGGG 59.078 66.667 12.95 8.90 41.19 4.96
783 785 2.676748 AGGCGATGATCTTCCTCTTCT 58.323 47.619 3.19 0.00 0.00 2.85
784 786 3.181471 TGAAGGCGATGATCTTCCTCTTC 60.181 47.826 20.10 20.10 38.76 2.87
800 804 2.079925 GTTGGTGTGAGAGATGAAGGC 58.920 52.381 0.00 0.00 0.00 4.35
803 807 3.242867 AGGAGTTGGTGTGAGAGATGAA 58.757 45.455 0.00 0.00 0.00 2.57
804 808 2.894731 AGGAGTTGGTGTGAGAGATGA 58.105 47.619 0.00 0.00 0.00 2.92
859 872 2.495921 ATACTAGTAGCTCGCGCGCG 62.496 60.000 44.84 44.84 42.32 6.86
965 987 0.179187 CTGGAGTACGTGTCTCGCTG 60.179 60.000 0.00 1.94 44.19 5.18
972 994 3.194968 CCCTTGTATTCTGGAGTACGTGT 59.805 47.826 0.00 0.00 0.00 4.49
985 1007 1.455587 CCATGGCCGCCCTTGTATT 60.456 57.895 7.03 0.00 35.15 1.89
1119 1141 1.188863 ATTCACCTGCATTCTTGGGC 58.811 50.000 0.00 0.00 0.00 5.36
1141 1163 2.328989 CATGCACGGGCTTATGCG 59.671 61.111 12.74 0.00 45.13 4.73
1164 1186 4.158209 TCATGATGATGCTCTAGCTCTAGC 59.842 45.833 12.21 12.21 42.66 3.42
1165 1187 5.416639 AGTCATGATGATGCTCTAGCTCTAG 59.583 44.000 0.00 0.00 42.66 2.43
1166 1188 5.323581 AGTCATGATGATGCTCTAGCTCTA 58.676 41.667 0.00 0.00 42.66 2.43
1167 1189 4.154176 AGTCATGATGATGCTCTAGCTCT 58.846 43.478 0.00 0.00 42.66 4.09
1218 1240 7.542890 TGAAAAGTTTCAACTCATTAAGCACA 58.457 30.769 4.00 0.00 43.62 4.57
1234 1256 7.719633 TGCCTAGTTAATCTGTCTGAAAAGTTT 59.280 33.333 0.00 0.00 0.00 2.66
1448 1470 4.894114 GGTGTATACTGGTATCCACAGACT 59.106 45.833 14.96 0.00 35.06 3.24
1485 1620 6.014925 ACATCGCAGGGTAAAAATTAAAGGTT 60.015 34.615 0.00 0.00 0.00 3.50
1527 1662 1.215647 GTAGTGCTGCCAGCGTACT 59.784 57.895 12.80 13.17 46.26 2.73
1528 1663 1.078759 CTGTAGTGCTGCCAGCGTAC 61.079 60.000 17.72 17.72 46.26 3.67
1529 1664 1.215382 CTGTAGTGCTGCCAGCGTA 59.785 57.895 12.80 3.22 46.26 4.42
1530 1665 2.047844 CTGTAGTGCTGCCAGCGT 60.048 61.111 12.80 4.30 46.26 5.07
1531 1666 2.047844 ACTGTAGTGCTGCCAGCG 60.048 61.111 12.80 0.00 46.26 5.18
1532 1667 3.571119 CACTGTAGTGCTGCCAGC 58.429 61.111 10.45 10.45 42.82 4.85
1568 1704 1.817357 GGGTTGTTCGAAAGTAGGGG 58.183 55.000 0.00 0.00 0.00 4.79
1570 1706 0.794473 GCGGGTTGTTCGAAAGTAGG 59.206 55.000 0.00 0.00 0.00 3.18
1587 1723 5.482908 ACTCCCTTAATTCTATGCATAGCG 58.517 41.667 26.05 7.68 0.00 4.26
1596 1732 9.551339 TGAGTTTTAGGTACTCCCTTAATTCTA 57.449 33.333 0.00 0.00 42.73 2.10
1597 1733 8.445361 TGAGTTTTAGGTACTCCCTTAATTCT 57.555 34.615 0.00 0.00 42.73 2.40
1598 1734 9.327628 GATGAGTTTTAGGTACTCCCTTAATTC 57.672 37.037 0.00 0.00 42.73 2.17
1599 1735 9.059023 AGATGAGTTTTAGGTACTCCCTTAATT 57.941 33.333 0.00 0.00 42.73 1.40
1600 1736 8.625467 AGATGAGTTTTAGGTACTCCCTTAAT 57.375 34.615 0.00 0.00 42.73 1.40
1601 1737 9.198475 CTAGATGAGTTTTAGGTACTCCCTTAA 57.802 37.037 0.00 0.00 42.73 1.85
1602 1738 8.563502 TCTAGATGAGTTTTAGGTACTCCCTTA 58.436 37.037 0.00 0.00 42.73 2.69
1603 1739 7.420029 TCTAGATGAGTTTTAGGTACTCCCTT 58.580 38.462 0.00 0.00 42.73 3.95
1604 1740 7.507616 CATCTAGATGAGTTTTAGGTACTCCCT 59.492 40.741 25.78 0.00 43.27 4.20
1605 1741 7.506261 TCATCTAGATGAGTTTTAGGTACTCCC 59.494 40.741 27.93 0.00 42.42 4.30
1606 1742 8.466617 TCATCTAGATGAGTTTTAGGTACTCC 57.533 38.462 27.93 0.00 42.42 3.85
1656 1792 9.680315 CGTGGGTTGTATTTGTTCTTATTTTTA 57.320 29.630 0.00 0.00 0.00 1.52
1657 1793 8.198778 ACGTGGGTTGTATTTGTTCTTATTTTT 58.801 29.630 0.00 0.00 0.00 1.94
1658 1794 7.718525 ACGTGGGTTGTATTTGTTCTTATTTT 58.281 30.769 0.00 0.00 0.00 1.82
1659 1795 7.013464 TGACGTGGGTTGTATTTGTTCTTATTT 59.987 33.333 0.00 0.00 0.00 1.40
1660 1796 6.487331 TGACGTGGGTTGTATTTGTTCTTATT 59.513 34.615 0.00 0.00 0.00 1.40
1661 1797 5.998981 TGACGTGGGTTGTATTTGTTCTTAT 59.001 36.000 0.00 0.00 0.00 1.73
1662 1798 5.366460 TGACGTGGGTTGTATTTGTTCTTA 58.634 37.500 0.00 0.00 0.00 2.10
1663 1799 4.200874 TGACGTGGGTTGTATTTGTTCTT 58.799 39.130 0.00 0.00 0.00 2.52
1664 1800 3.811083 TGACGTGGGTTGTATTTGTTCT 58.189 40.909 0.00 0.00 0.00 3.01
1665 1801 3.608474 GCTGACGTGGGTTGTATTTGTTC 60.608 47.826 0.00 0.00 0.00 3.18
1666 1802 2.292292 GCTGACGTGGGTTGTATTTGTT 59.708 45.455 0.00 0.00 0.00 2.83
1667 1803 1.877443 GCTGACGTGGGTTGTATTTGT 59.123 47.619 0.00 0.00 0.00 2.83
1668 1804 1.876799 TGCTGACGTGGGTTGTATTTG 59.123 47.619 0.00 0.00 0.00 2.32
1669 1805 1.877443 GTGCTGACGTGGGTTGTATTT 59.123 47.619 0.00 0.00 0.00 1.40
1670 1806 1.202710 TGTGCTGACGTGGGTTGTATT 60.203 47.619 0.00 0.00 0.00 1.89
1671 1807 0.394938 TGTGCTGACGTGGGTTGTAT 59.605 50.000 0.00 0.00 0.00 2.29
1672 1808 0.394938 ATGTGCTGACGTGGGTTGTA 59.605 50.000 0.00 0.00 0.00 2.41
1673 1809 0.394938 TATGTGCTGACGTGGGTTGT 59.605 50.000 0.00 0.00 0.00 3.32
1674 1810 1.078709 CTATGTGCTGACGTGGGTTG 58.921 55.000 0.00 0.00 0.00 3.77
1675 1811 0.973632 TCTATGTGCTGACGTGGGTT 59.026 50.000 0.00 0.00 0.00 4.11
1676 1812 0.246635 GTCTATGTGCTGACGTGGGT 59.753 55.000 0.00 0.00 0.00 4.51
1677 1813 0.246360 TGTCTATGTGCTGACGTGGG 59.754 55.000 0.00 0.00 36.10 4.61
1678 1814 2.159184 AGATGTCTATGTGCTGACGTGG 60.159 50.000 0.00 0.00 36.10 4.94
1679 1815 3.156511 AGATGTCTATGTGCTGACGTG 57.843 47.619 0.00 0.00 36.10 4.49
1680 1816 3.876274 AAGATGTCTATGTGCTGACGT 57.124 42.857 0.00 0.00 36.10 4.34
1681 1817 5.570973 GCTATAAGATGTCTATGTGCTGACG 59.429 44.000 0.00 0.00 36.10 4.35
1682 1818 6.450545 TGCTATAAGATGTCTATGTGCTGAC 58.549 40.000 0.00 0.00 0.00 3.51
1683 1819 6.655078 TGCTATAAGATGTCTATGTGCTGA 57.345 37.500 0.00 0.00 0.00 4.26
1684 1820 7.719778 TTTGCTATAAGATGTCTATGTGCTG 57.280 36.000 0.00 0.00 0.00 4.41
1685 1821 7.989741 ACTTTTGCTATAAGATGTCTATGTGCT 59.010 33.333 0.00 0.00 0.00 4.40
1686 1822 8.066595 CACTTTTGCTATAAGATGTCTATGTGC 58.933 37.037 0.00 0.00 0.00 4.57
1687 1823 9.102757 ACACTTTTGCTATAAGATGTCTATGTG 57.897 33.333 0.00 0.00 0.00 3.21
1692 1828 9.102757 CATGTACACTTTTGCTATAAGATGTCT 57.897 33.333 0.00 0.00 0.00 3.41
1693 1829 8.338259 CCATGTACACTTTTGCTATAAGATGTC 58.662 37.037 0.00 0.00 0.00 3.06
1694 1830 7.283127 CCCATGTACACTTTTGCTATAAGATGT 59.717 37.037 0.00 0.00 0.00 3.06
1695 1831 7.283127 ACCCATGTACACTTTTGCTATAAGATG 59.717 37.037 0.00 0.00 0.00 2.90
1696 1832 7.346471 ACCCATGTACACTTTTGCTATAAGAT 58.654 34.615 0.00 0.00 0.00 2.40
1697 1833 6.717289 ACCCATGTACACTTTTGCTATAAGA 58.283 36.000 0.00 0.00 0.00 2.10
1698 1834 7.336931 AGAACCCATGTACACTTTTGCTATAAG 59.663 37.037 0.00 0.00 0.00 1.73
1699 1835 7.172342 AGAACCCATGTACACTTTTGCTATAA 58.828 34.615 0.00 0.00 0.00 0.98
1700 1836 6.717289 AGAACCCATGTACACTTTTGCTATA 58.283 36.000 0.00 0.00 0.00 1.31
1701 1837 5.570320 AGAACCCATGTACACTTTTGCTAT 58.430 37.500 0.00 0.00 0.00 2.97
1702 1838 4.980573 AGAACCCATGTACACTTTTGCTA 58.019 39.130 0.00 0.00 0.00 3.49
1703 1839 3.832527 AGAACCCATGTACACTTTTGCT 58.167 40.909 0.00 0.00 0.00 3.91
1704 1840 4.379499 GCTAGAACCCATGTACACTTTTGC 60.379 45.833 0.00 0.00 0.00 3.68
1705 1841 4.759693 TGCTAGAACCCATGTACACTTTTG 59.240 41.667 0.00 0.00 0.00 2.44
1706 1842 4.980573 TGCTAGAACCCATGTACACTTTT 58.019 39.130 0.00 0.00 0.00 2.27
1707 1843 4.634012 TGCTAGAACCCATGTACACTTT 57.366 40.909 0.00 0.00 0.00 2.66
1708 1844 4.634012 TTGCTAGAACCCATGTACACTT 57.366 40.909 0.00 0.00 0.00 3.16
1709 1845 4.634012 TTTGCTAGAACCCATGTACACT 57.366 40.909 0.00 0.00 0.00 3.55
1710 1846 4.760204 ACTTTTGCTAGAACCCATGTACAC 59.240 41.667 0.00 0.00 0.00 2.90
1711 1847 4.759693 CACTTTTGCTAGAACCCATGTACA 59.240 41.667 0.00 0.00 0.00 2.90
1712 1848 4.760204 ACACTTTTGCTAGAACCCATGTAC 59.240 41.667 0.00 0.00 0.00 2.90
1713 1849 4.980573 ACACTTTTGCTAGAACCCATGTA 58.019 39.130 0.00 0.00 0.00 2.29
1714 1850 3.832527 ACACTTTTGCTAGAACCCATGT 58.167 40.909 0.00 0.00 0.00 3.21
1715 1851 5.245531 TCTACACTTTTGCTAGAACCCATG 58.754 41.667 0.00 0.00 0.00 3.66
1716 1852 5.499004 TCTACACTTTTGCTAGAACCCAT 57.501 39.130 0.00 0.00 0.00 4.00
1717 1853 4.967084 TCTACACTTTTGCTAGAACCCA 57.033 40.909 0.00 0.00 0.00 4.51
1718 1854 6.819397 AATTCTACACTTTTGCTAGAACCC 57.181 37.500 0.00 0.00 32.72 4.11
1719 1855 9.774742 CATTAATTCTACACTTTTGCTAGAACC 57.225 33.333 0.00 0.00 32.72 3.62
1722 1858 9.944376 ACTCATTAATTCTACACTTTTGCTAGA 57.056 29.630 0.00 0.00 0.00 2.43
1794 1930 9.944376 ACACTTTTGCTAGAACTCATTTAGATA 57.056 29.630 0.00 0.00 0.00 1.98
1795 1931 8.854614 ACACTTTTGCTAGAACTCATTTAGAT 57.145 30.769 0.00 0.00 0.00 1.98
1796 1932 9.424319 CTACACTTTTGCTAGAACTCATTTAGA 57.576 33.333 0.00 0.00 0.00 2.10
1797 1933 9.424319 TCTACACTTTTGCTAGAACTCATTTAG 57.576 33.333 0.00 0.00 0.00 1.85
1798 1934 9.772973 TTCTACACTTTTGCTAGAACTCATTTA 57.227 29.630 0.00 0.00 0.00 1.40
1799 1935 8.677148 TTCTACACTTTTGCTAGAACTCATTT 57.323 30.769 0.00 0.00 0.00 2.32
1800 1936 8.854614 ATTCTACACTTTTGCTAGAACTCATT 57.145 30.769 0.00 0.00 32.72 2.57
1801 1937 8.854614 AATTCTACACTTTTGCTAGAACTCAT 57.145 30.769 0.00 0.00 32.72 2.90
1802 1938 9.772973 TTAATTCTACACTTTTGCTAGAACTCA 57.227 29.630 0.00 0.00 32.72 3.41
1807 1943 9.944376 ACTCATTAATTCTACACTTTTGCTAGA 57.056 29.630 0.00 0.00 0.00 2.43
1827 1963 9.853177 CCTCCCAATAGAACTTTATTACTCATT 57.147 33.333 0.00 0.00 0.00 2.57
1828 1964 7.939588 GCCTCCCAATAGAACTTTATTACTCAT 59.060 37.037 0.00 0.00 0.00 2.90
1829 1965 7.127339 AGCCTCCCAATAGAACTTTATTACTCA 59.873 37.037 0.00 0.00 0.00 3.41
1830 1966 7.510407 AGCCTCCCAATAGAACTTTATTACTC 58.490 38.462 0.00 0.00 0.00 2.59
1831 1967 7.453141 AGCCTCCCAATAGAACTTTATTACT 57.547 36.000 0.00 0.00 0.00 2.24
1832 1968 7.041984 CGAAGCCTCCCAATAGAACTTTATTAC 60.042 40.741 0.00 0.00 0.00 1.89
1833 1969 6.990349 CGAAGCCTCCCAATAGAACTTTATTA 59.010 38.462 0.00 0.00 0.00 0.98
1834 1970 5.823045 CGAAGCCTCCCAATAGAACTTTATT 59.177 40.000 0.00 0.00 0.00 1.40
1835 1971 5.130477 TCGAAGCCTCCCAATAGAACTTTAT 59.870 40.000 0.00 0.00 0.00 1.40
1836 1972 4.468510 TCGAAGCCTCCCAATAGAACTTTA 59.531 41.667 0.00 0.00 0.00 1.85
1837 1973 3.263425 TCGAAGCCTCCCAATAGAACTTT 59.737 43.478 0.00 0.00 0.00 2.66
1838 1974 2.838202 TCGAAGCCTCCCAATAGAACTT 59.162 45.455 0.00 0.00 0.00 2.66
1839 1975 2.467880 TCGAAGCCTCCCAATAGAACT 58.532 47.619 0.00 0.00 0.00 3.01
1840 1976 2.981859 TCGAAGCCTCCCAATAGAAC 57.018 50.000 0.00 0.00 0.00 3.01
1841 1977 3.992943 TTTCGAAGCCTCCCAATAGAA 57.007 42.857 0.00 0.00 0.00 2.10
1842 1978 3.992943 TTTTCGAAGCCTCCCAATAGA 57.007 42.857 0.00 0.00 0.00 1.98
1862 1998 4.089361 GTGACTCCCAATGGATCCTTTTT 58.911 43.478 14.23 1.23 40.80 1.94
1863 1999 3.075882 TGTGACTCCCAATGGATCCTTTT 59.924 43.478 14.23 3.93 40.80 2.27
1864 2000 2.649312 TGTGACTCCCAATGGATCCTTT 59.351 45.455 14.23 10.41 40.80 3.11
1865 2001 2.240667 CTGTGACTCCCAATGGATCCTT 59.759 50.000 14.23 3.29 40.80 3.36
1866 2002 1.842562 CTGTGACTCCCAATGGATCCT 59.157 52.381 14.23 0.00 40.80 3.24
1867 2003 1.748591 GCTGTGACTCCCAATGGATCC 60.749 57.143 4.20 4.20 40.80 3.36
1868 2004 1.673168 GCTGTGACTCCCAATGGATC 58.327 55.000 0.00 0.00 40.80 3.36
1869 2005 0.257039 GGCTGTGACTCCCAATGGAT 59.743 55.000 0.00 0.00 40.80 3.41
1870 2006 1.133181 TGGCTGTGACTCCCAATGGA 61.133 55.000 0.00 0.00 38.75 3.41
1871 2007 0.962356 GTGGCTGTGACTCCCAATGG 60.962 60.000 0.00 0.00 0.00 3.16
1872 2008 0.250858 TGTGGCTGTGACTCCCAATG 60.251 55.000 0.00 0.00 0.00 2.82
1873 2009 0.700564 ATGTGGCTGTGACTCCCAAT 59.299 50.000 0.00 0.00 0.00 3.16
1874 2010 0.250858 CATGTGGCTGTGACTCCCAA 60.251 55.000 0.00 0.00 0.00 4.12
1875 2011 1.376086 CATGTGGCTGTGACTCCCA 59.624 57.895 0.00 0.00 0.00 4.37
1876 2012 1.377725 CCATGTGGCTGTGACTCCC 60.378 63.158 0.00 0.00 0.00 4.30
1877 2013 0.254178 ATCCATGTGGCTGTGACTCC 59.746 55.000 0.00 0.00 34.44 3.85
1878 2014 1.065926 TGATCCATGTGGCTGTGACTC 60.066 52.381 0.00 0.00 34.44 3.36
1879 2015 0.986527 TGATCCATGTGGCTGTGACT 59.013 50.000 0.00 0.00 34.44 3.41
1880 2016 1.339438 ACTGATCCATGTGGCTGTGAC 60.339 52.381 0.00 0.00 34.44 3.67
1881 2017 0.986527 ACTGATCCATGTGGCTGTGA 59.013 50.000 0.00 0.00 34.44 3.58
1882 2018 1.376543 GACTGATCCATGTGGCTGTG 58.623 55.000 0.00 0.00 34.44 3.66
1883 2019 0.254178 GGACTGATCCATGTGGCTGT 59.746 55.000 0.00 0.00 45.47 4.40
1884 2020 3.091318 GGACTGATCCATGTGGCTG 57.909 57.895 0.00 0.00 45.47 4.85
1925 2062 4.767409 AGACACAGTAGTCAATGCACTAGA 59.233 41.667 0.00 0.00 40.98 2.43
1944 2081 1.673337 GCATGTGCTGCCAGAGACA 60.673 57.895 0.00 0.00 45.66 3.41
1981 2120 3.385193 TCACGATTGACAGCTTCTGAA 57.615 42.857 0.29 0.00 35.18 3.02
2014 2153 5.998363 AGAGCTCTTTTACCAACGAGATTTT 59.002 36.000 11.45 0.00 31.25 1.82
2076 2215 5.014858 ACTCTCAACCTAAACAGTCGGATA 58.985 41.667 0.00 0.00 0.00 2.59
2090 2229 5.593010 AGCGTTATATCTGAACTCTCAACC 58.407 41.667 0.00 0.00 0.00 3.77
2157 2355 7.381408 GCACTACAGTCATTACGCTATGATTTA 59.619 37.037 3.69 0.00 36.94 1.40
2171 2369 6.565811 CGTTGTACAATTTGCACTACAGTCAT 60.566 38.462 12.26 0.00 0.00 3.06
2184 2384 5.427036 AATTGTCGGACGTTGTACAATTT 57.573 34.783 20.90 1.30 45.49 1.82
2196 2396 2.484264 CTCTCAACCCAAATTGTCGGAC 59.516 50.000 0.00 0.00 0.00 4.79
2210 2410 1.731720 GTGATGCCTCACCTCTCAAC 58.268 55.000 10.74 0.00 45.06 3.18
2232 2432 7.222805 CCATATAAGCATACAGTAGCGTATTGG 59.777 40.741 12.25 13.61 36.88 3.16
2253 2463 7.670979 TGATGCCTATGTTAATTTCAGCCATAT 59.329 33.333 0.00 0.00 0.00 1.78
2263 2473 7.391148 AAACGAAGTGATGCCTATGTTAATT 57.609 32.000 0.00 0.00 45.00 1.40
2265 2475 6.653320 AGAAAACGAAGTGATGCCTATGTTAA 59.347 34.615 0.00 0.00 45.00 2.01
2266 2476 6.170506 AGAAAACGAAGTGATGCCTATGTTA 58.829 36.000 0.00 0.00 45.00 2.41
2271 2481 3.250744 CGAGAAAACGAAGTGATGCCTA 58.749 45.455 0.00 0.00 45.00 3.93
2278 2492 0.782384 CCGGACGAGAAAACGAAGTG 59.218 55.000 0.00 0.00 45.00 3.16
2299 2513 6.974622 ACAGTAGAAAAAGCACATGAAACAAG 59.025 34.615 0.00 0.00 0.00 3.16
2301 2515 6.264832 CACAGTAGAAAAAGCACATGAAACA 58.735 36.000 0.00 0.00 0.00 2.83
2325 2539 6.145696 GGGAACGACACTACTATTGATTATGC 59.854 42.308 0.00 0.00 0.00 3.14
2385 2599 1.270252 CCACAGGTTTGGAATGCAACC 60.270 52.381 6.38 6.38 42.61 3.77
2515 2729 1.534729 ACAAATTCCCGAGCTTGACC 58.465 50.000 1.22 0.00 0.00 4.02
2527 2741 4.868171 TGTATCACCACGCTCTACAAATTC 59.132 41.667 0.00 0.00 0.00 2.17
2544 2758 2.661718 TGCATCTCCCTACGTGTATCA 58.338 47.619 0.00 0.00 0.00 2.15
2582 2796 6.073003 GGGCACTGAAGACACAAATATATAGC 60.073 42.308 0.00 0.00 0.00 2.97
2623 2837 1.134037 AGCGGGTTTGTGTTGGAGTTA 60.134 47.619 0.00 0.00 0.00 2.24
2646 2860 5.425217 TCCTTTTCCTATGCACTACAGATGA 59.575 40.000 0.00 0.00 0.00 2.92
2647 2861 5.674525 TCCTTTTCCTATGCACTACAGATG 58.325 41.667 0.00 0.00 0.00 2.90
2648 2862 5.957771 TCCTTTTCCTATGCACTACAGAT 57.042 39.130 0.00 0.00 0.00 2.90
2649 2863 5.755409 TTCCTTTTCCTATGCACTACAGA 57.245 39.130 0.00 0.00 0.00 3.41
2717 2932 3.197790 GCACACGGCAGCGATCAT 61.198 61.111 0.00 0.00 43.97 2.45
2785 3000 0.323451 GGGAACTAGCTTTGGGTGGG 60.323 60.000 0.00 0.00 0.00 4.61
2787 3002 2.162681 CAAGGGAACTAGCTTTGGGTG 58.837 52.381 0.00 0.00 42.68 4.61
2789 3004 1.354368 TCCAAGGGAACTAGCTTTGGG 59.646 52.381 10.44 0.00 42.68 4.12
2839 3124 2.762535 ATGAACAGACGGGGTAGTTG 57.237 50.000 0.00 0.00 0.00 3.16
2989 3280 8.761575 ATTTTCGCAGTATTTTCATGAATTGT 57.238 26.923 9.40 1.17 0.00 2.71
2994 3285 8.672815 TGTGATATTTTCGCAGTATTTTCATGA 58.327 29.630 0.00 0.00 39.90 3.07
3007 3298 4.110482 ACGAGGTACTGTGATATTTTCGC 58.890 43.478 0.00 0.00 41.55 4.70
3009 3300 7.591006 TGAAACGAGGTACTGTGATATTTTC 57.409 36.000 0.00 0.00 41.55 2.29
3014 3305 7.833786 ACTATTTGAAACGAGGTACTGTGATA 58.166 34.615 0.00 0.00 41.55 2.15
3017 3308 6.309737 GGTACTATTTGAAACGAGGTACTGTG 59.690 42.308 0.00 0.00 41.55 3.66
3052 3343 9.410556 AGAAAATAATTGAAATGTTTCCACGAG 57.589 29.630 3.26 0.00 36.36 4.18
3185 3477 9.965902 AAAGTGGAGAGAGACATTTGTTATATT 57.034 29.630 0.00 0.00 0.00 1.28
3252 3544 2.915869 TGGGGAGAGAGAGGCTAAAAA 58.084 47.619 0.00 0.00 0.00 1.94
3253 3545 2.572104 GTTGGGGAGAGAGAGGCTAAAA 59.428 50.000 0.00 0.00 0.00 1.52
3254 3546 2.188817 GTTGGGGAGAGAGAGGCTAAA 58.811 52.381 0.00 0.00 0.00 1.85
3255 3547 1.362932 AGTTGGGGAGAGAGAGGCTAA 59.637 52.381 0.00 0.00 0.00 3.09
3256 3548 1.011595 AGTTGGGGAGAGAGAGGCTA 58.988 55.000 0.00 0.00 0.00 3.93
3257 3549 0.118144 AAGTTGGGGAGAGAGAGGCT 59.882 55.000 0.00 0.00 0.00 4.58
3258 3550 0.539518 GAAGTTGGGGAGAGAGAGGC 59.460 60.000 0.00 0.00 0.00 4.70
3259 3551 2.246091 AGAAGTTGGGGAGAGAGAGG 57.754 55.000 0.00 0.00 0.00 3.69
3260 3552 4.632327 AAAAGAAGTTGGGGAGAGAGAG 57.368 45.455 0.00 0.00 0.00 3.20
3261 3553 4.020128 GCTAAAAGAAGTTGGGGAGAGAGA 60.020 45.833 0.00 0.00 0.00 3.10
3262 3554 4.257731 GCTAAAAGAAGTTGGGGAGAGAG 58.742 47.826 0.00 0.00 0.00 3.20
3263 3555 3.009143 GGCTAAAAGAAGTTGGGGAGAGA 59.991 47.826 0.00 0.00 0.00 3.10
3264 3556 3.009584 AGGCTAAAAGAAGTTGGGGAGAG 59.990 47.826 0.00 0.00 0.00 3.20
3265 3557 2.986728 AGGCTAAAAGAAGTTGGGGAGA 59.013 45.455 0.00 0.00 0.00 3.71
3266 3558 3.009584 AGAGGCTAAAAGAAGTTGGGGAG 59.990 47.826 0.00 0.00 0.00 4.30
3267 3559 2.986728 AGAGGCTAAAAGAAGTTGGGGA 59.013 45.455 0.00 0.00 0.00 4.81
3268 3560 3.009584 AGAGAGGCTAAAAGAAGTTGGGG 59.990 47.826 0.00 0.00 0.00 4.96
3269 3561 4.019771 AGAGAGAGGCTAAAAGAAGTTGGG 60.020 45.833 0.00 0.00 0.00 4.12
3270 3562 5.159273 AGAGAGAGGCTAAAAGAAGTTGG 57.841 43.478 0.00 0.00 0.00 3.77
3271 3563 5.175127 GGAGAGAGAGGCTAAAAGAAGTTG 58.825 45.833 0.00 0.00 0.00 3.16
3272 3564 4.224147 GGGAGAGAGAGGCTAAAAGAAGTT 59.776 45.833 0.00 0.00 0.00 2.66
3273 3565 3.772572 GGGAGAGAGAGGCTAAAAGAAGT 59.227 47.826 0.00 0.00 0.00 3.01
3274 3566 3.133901 GGGGAGAGAGAGGCTAAAAGAAG 59.866 52.174 0.00 0.00 0.00 2.85
3275 3567 3.108376 GGGGAGAGAGAGGCTAAAAGAA 58.892 50.000 0.00 0.00 0.00 2.52
3276 3568 2.044492 TGGGGAGAGAGAGGCTAAAAGA 59.956 50.000 0.00 0.00 0.00 2.52
3277 3569 2.472029 TGGGGAGAGAGAGGCTAAAAG 58.528 52.381 0.00 0.00 0.00 2.27
3278 3570 2.572104 GTTGGGGAGAGAGAGGCTAAAA 59.428 50.000 0.00 0.00 0.00 1.52
3279 3571 2.188817 GTTGGGGAGAGAGAGGCTAAA 58.811 52.381 0.00 0.00 0.00 1.85
3280 3572 1.362932 AGTTGGGGAGAGAGAGGCTAA 59.637 52.381 0.00 0.00 0.00 3.09
3281 3573 1.011595 AGTTGGGGAGAGAGAGGCTA 58.988 55.000 0.00 0.00 0.00 3.93
3282 3574 0.118144 AAGTTGGGGAGAGAGAGGCT 59.882 55.000 0.00 0.00 0.00 4.58
3283 3575 0.539518 GAAGTTGGGGAGAGAGAGGC 59.460 60.000 0.00 0.00 0.00 4.70
3284 3576 2.246091 AGAAGTTGGGGAGAGAGAGG 57.754 55.000 0.00 0.00 0.00 3.69
3285 3577 4.632327 AAAAGAAGTTGGGGAGAGAGAG 57.368 45.455 0.00 0.00 0.00 3.20
3286 3578 4.020128 GCTAAAAGAAGTTGGGGAGAGAGA 60.020 45.833 0.00 0.00 0.00 3.10
3287 3579 4.257731 GCTAAAAGAAGTTGGGGAGAGAG 58.742 47.826 0.00 0.00 0.00 3.20
3288 3580 3.009143 GGCTAAAAGAAGTTGGGGAGAGA 59.991 47.826 0.00 0.00 0.00 3.10
3289 3581 3.009584 AGGCTAAAAGAAGTTGGGGAGAG 59.990 47.826 0.00 0.00 0.00 3.20
3290 3582 2.986728 AGGCTAAAAGAAGTTGGGGAGA 59.013 45.455 0.00 0.00 0.00 3.71
3291 3583 3.009584 AGAGGCTAAAAGAAGTTGGGGAG 59.990 47.826 0.00 0.00 0.00 4.30
3292 3584 2.986728 AGAGGCTAAAAGAAGTTGGGGA 59.013 45.455 0.00 0.00 0.00 4.81
3293 3585 3.009584 AGAGAGGCTAAAAGAAGTTGGGG 59.990 47.826 0.00 0.00 0.00 4.96
3294 3586 4.019771 AGAGAGAGGCTAAAAGAAGTTGGG 60.020 45.833 0.00 0.00 0.00 4.12
3295 3587 5.159273 AGAGAGAGGCTAAAAGAAGTTGG 57.841 43.478 0.00 0.00 0.00 3.77
3296 3588 6.934083 AGAAAGAGAGAGGCTAAAAGAAGTTG 59.066 38.462 0.00 0.00 0.00 3.16
3297 3589 7.073457 AGAAAGAGAGAGGCTAAAAGAAGTT 57.927 36.000 0.00 0.00 0.00 2.66
3298 3590 6.295632 GGAGAAAGAGAGAGGCTAAAAGAAGT 60.296 42.308 0.00 0.00 0.00 3.01
3299 3591 6.106003 GGAGAAAGAGAGAGGCTAAAAGAAG 58.894 44.000 0.00 0.00 0.00 2.85
3300 3592 5.544176 TGGAGAAAGAGAGAGGCTAAAAGAA 59.456 40.000 0.00 0.00 0.00 2.52
3301 3593 5.087323 TGGAGAAAGAGAGAGGCTAAAAGA 58.913 41.667 0.00 0.00 0.00 2.52
3302 3594 5.413309 TGGAGAAAGAGAGAGGCTAAAAG 57.587 43.478 0.00 0.00 0.00 2.27
3303 3595 5.308237 AGTTGGAGAAAGAGAGAGGCTAAAA 59.692 40.000 0.00 0.00 0.00 1.52
3304 3596 4.841246 AGTTGGAGAAAGAGAGAGGCTAAA 59.159 41.667 0.00 0.00 0.00 1.85
3305 3597 4.421131 AGTTGGAGAAAGAGAGAGGCTAA 58.579 43.478 0.00 0.00 0.00 3.09
3306 3598 4.054359 AGTTGGAGAAAGAGAGAGGCTA 57.946 45.455 0.00 0.00 0.00 3.93
3307 3599 2.901291 AGTTGGAGAAAGAGAGAGGCT 58.099 47.619 0.00 0.00 0.00 4.58
3308 3600 3.694043 AAGTTGGAGAAAGAGAGAGGC 57.306 47.619 0.00 0.00 0.00 4.70
3410 3707 8.706322 AGGGAGTACAAGATTATGTTGTTTTT 57.294 30.769 12.82 0.18 38.98 1.94
3438 3735 9.640963 GTGTAATACACTCTCATATTATGGGAC 57.359 37.037 15.68 0.00 45.27 4.46
3472 3769 7.990886 TCTGTCCCATAATATAAGAGCGTTTTT 59.009 33.333 0.00 0.00 0.00 1.94
3473 3770 7.506114 TCTGTCCCATAATATAAGAGCGTTTT 58.494 34.615 0.00 0.00 0.00 2.43
3474 3771 7.062749 TCTGTCCCATAATATAAGAGCGTTT 57.937 36.000 0.00 0.00 0.00 3.60
3475 3772 6.295349 CCTCTGTCCCATAATATAAGAGCGTT 60.295 42.308 0.00 0.00 0.00 4.84
3476 3773 5.186021 CCTCTGTCCCATAATATAAGAGCGT 59.814 44.000 0.00 0.00 0.00 5.07
3477 3774 5.419155 TCCTCTGTCCCATAATATAAGAGCG 59.581 44.000 0.00 0.00 0.00 5.03
3478 3775 6.859112 TCCTCTGTCCCATAATATAAGAGC 57.141 41.667 0.00 0.00 0.00 4.09
3491 3788 9.901172 TTATTTAAGAATTACTTCCTCTGTCCC 57.099 33.333 0.00 0.00 39.72 4.46
3521 3818 6.986904 TTACTGTTGACATGTGTGTGTTTA 57.013 33.333 1.15 0.00 39.09 2.01
3540 3837 7.169982 GCTGATTATGCTACTTCGACATTTACT 59.830 37.037 0.00 0.00 0.00 2.24
3564 3861 6.144078 ACTTCAACTCGGTTAAAAATTGCT 57.856 33.333 0.00 0.00 0.00 3.91
3607 3957 2.080286 AGTTGAGACGGATTTGGACG 57.920 50.000 0.00 0.00 0.00 4.79
3715 4071 0.457035 TAAGTGTGGACGGCGGATAC 59.543 55.000 13.24 7.30 0.00 2.24
3736 4092 4.272489 TCTTGGGCATTAGAAATGAGTGG 58.728 43.478 3.86 0.00 0.00 4.00
3772 4129 6.265649 TCCTCTAAGCACCTATGTAATCAGAC 59.734 42.308 0.00 0.00 0.00 3.51
3830 4198 6.584184 GCTTCCTAAATGAAGAAAGCAAAGAC 59.416 38.462 5.03 0.00 43.60 3.01
3835 4203 7.944729 AATAGCTTCCTAAATGAAGAAAGCA 57.055 32.000 5.03 0.00 43.60 3.91
3884 4259 1.491668 TTGCTAGATGCGGGACCTAA 58.508 50.000 0.00 0.00 46.63 2.69
3893 4269 6.255020 CCAATGAAGAAACAATTGCTAGATGC 59.745 38.462 5.05 0.00 43.25 3.91
3966 4348 3.342719 AGTGGGCAAAAACCAACAAAAG 58.657 40.909 0.00 0.00 40.24 2.27
3971 4353 2.682155 TGAAGTGGGCAAAAACCAAC 57.318 45.000 0.00 0.00 40.24 3.77
3973 4355 3.571590 ACTATGAAGTGGGCAAAAACCA 58.428 40.909 0.00 0.00 33.57 3.67
3974 4356 3.826729 AGACTATGAAGTGGGCAAAAACC 59.173 43.478 0.00 0.00 35.56 3.27
3975 4357 4.518970 TGAGACTATGAAGTGGGCAAAAAC 59.481 41.667 0.00 0.00 35.56 2.43
3984 4366 7.428826 TGTACATATGCTGAGACTATGAAGTG 58.571 38.462 1.58 0.00 35.56 3.16
4003 4385 3.873801 GCCATTCCCACTGTCTTGTACAT 60.874 47.826 0.00 0.00 37.50 2.29
4010 4392 0.842030 TCAGGCCATTCCCACTGTCT 60.842 55.000 5.01 0.00 34.51 3.41
4028 4416 0.874607 ACCGTGCGTCTGTTTCACTC 60.875 55.000 0.00 0.00 0.00 3.51
4122 4512 3.618690 ACCTAGCTACTTTGCTTCTGG 57.381 47.619 0.00 0.00 43.74 3.86
4125 4515 2.420372 GCCAACCTAGCTACTTTGCTTC 59.580 50.000 0.00 0.00 43.74 3.86
4127 4517 1.676014 CGCCAACCTAGCTACTTTGCT 60.676 52.381 0.00 0.00 46.11 3.91
4128 4518 0.727398 CGCCAACCTAGCTACTTTGC 59.273 55.000 0.00 0.00 0.00 3.68
4129 4519 0.727398 GCGCCAACCTAGCTACTTTG 59.273 55.000 0.00 0.00 0.00 2.77
4130 4520 0.739813 CGCGCCAACCTAGCTACTTT 60.740 55.000 0.00 0.00 0.00 2.66
4131 4521 1.153628 CGCGCCAACCTAGCTACTT 60.154 57.895 0.00 0.00 0.00 2.24
4132 4522 2.494918 CGCGCCAACCTAGCTACT 59.505 61.111 0.00 0.00 0.00 2.57
4133 4523 2.585247 CCGCGCCAACCTAGCTAC 60.585 66.667 0.00 0.00 0.00 3.58
4148 4630 3.425577 TTAGTGAAGGTATACGCACCG 57.574 47.619 14.64 0.00 43.84 4.94
4149 4631 5.197682 AGATTAGTGAAGGTATACGCACC 57.802 43.478 14.64 0.00 39.02 5.01
4150 4632 6.505272 AGAAGATTAGTGAAGGTATACGCAC 58.495 40.000 11.84 11.84 0.00 5.34
4229 4711 1.940613 GCAGGAAGAACGTGACAAGTT 59.059 47.619 6.46 6.46 36.62 2.66
4230 4712 1.583054 GCAGGAAGAACGTGACAAGT 58.417 50.000 0.00 0.00 36.62 3.16
4252 4734 4.308265 GAGAAAGAACTGCGAGTTAACCT 58.692 43.478 0.88 0.00 38.80 3.50
4299 4781 8.775151 TCATATCTTGCATGATAATGATAGGGT 58.225 33.333 21.99 4.18 33.31 4.34
4300 4782 9.794719 ATCATATCTTGCATGATAATGATAGGG 57.205 33.333 25.45 12.97 40.51 3.53
4338 4820 5.065859 TGCTCTGTTTTTCGTCAATGAAAGA 59.934 36.000 0.00 0.00 38.92 2.52
4367 4849 5.647658 AGATGTATTCGACAGCCAATGAAAA 59.352 36.000 0.00 0.00 46.07 2.29
4419 4903 0.972471 GGCCCTGCATTAAACCTGCT 60.972 55.000 0.00 0.00 40.34 4.24
4484 4968 1.305718 GGTCCCCTCAGCTCTCACT 60.306 63.158 0.00 0.00 0.00 3.41
4504 4988 0.183014 TAGTAGAGCCCTGGACCTCG 59.817 60.000 0.00 0.00 33.39 4.63
4540 5024 3.475774 GCGGCGTACACTTGACGG 61.476 66.667 9.37 0.00 40.66 4.79
4695 5182 3.194329 GGTTAACCGTGCTAAGGAGTAGT 59.806 47.826 9.34 0.00 31.78 2.73
4698 5185 2.028385 CAGGTTAACCGTGCTAAGGAGT 60.028 50.000 18.91 0.00 42.08 3.85
4699 5186 2.618053 CAGGTTAACCGTGCTAAGGAG 58.382 52.381 18.91 0.00 42.08 3.69
4700 5187 1.338389 GCAGGTTAACCGTGCTAAGGA 60.338 52.381 27.77 0.00 42.08 3.36
4764 5302 1.474330 CGGCTAAAAGCAAAGGGGAT 58.526 50.000 0.78 0.00 44.75 3.85
4765 5303 1.248101 GCGGCTAAAAGCAAAGGGGA 61.248 55.000 0.78 0.00 44.75 4.81
4809 5530 3.057806 TCAGTCAGACAAAATGCATGCTG 60.058 43.478 20.33 11.24 0.00 4.41
4825 5546 0.610174 GACCATCTGCCAGTCAGTCA 59.390 55.000 0.00 0.00 43.32 3.41
4826 5547 0.107945 GGACCATCTGCCAGTCAGTC 60.108 60.000 0.00 0.00 43.32 3.51
4827 5548 1.557269 GGGACCATCTGCCAGTCAGT 61.557 60.000 0.00 0.00 43.32 3.41
4828 5549 1.222936 GGGACCATCTGCCAGTCAG 59.777 63.158 0.00 0.00 44.21 3.51
4869 5590 3.004419 TCTTGATCTCGTTGTCTGTTCGT 59.996 43.478 0.00 0.00 0.00 3.85
4893 5614 2.797792 GCTGAGATGCGAGTTCCAGTAG 60.798 54.545 0.00 0.00 0.00 2.57
4932 5653 1.100510 CGGTGGTGTAGATCCTTCGA 58.899 55.000 0.00 0.00 0.00 3.71
4935 5656 1.825474 CTGACGGTGGTGTAGATCCTT 59.175 52.381 0.00 0.00 0.00 3.36
5280 6001 2.202492 CAGTTCGCCTCGAGGACG 60.202 66.667 35.69 32.41 37.14 4.79
5458 6179 2.421107 CCCAGTCCATGTCCAAGAGATG 60.421 54.545 0.00 0.00 33.82 2.90
5577 6298 0.318784 GCCAACTGACGAACGACTCT 60.319 55.000 0.14 0.00 0.00 3.24
5646 6367 1.114119 TGCTTTGCAATGGGCTGTGA 61.114 50.000 13.62 0.00 45.15 3.58
5677 6398 8.109705 TGCTTTGCTATTGTTTCTGATAAAGA 57.890 30.769 0.00 0.00 0.00 2.52
5678 6399 7.487189 CCTGCTTTGCTATTGTTTCTGATAAAG 59.513 37.037 0.00 0.00 0.00 1.85
5682 6403 4.768968 ACCTGCTTTGCTATTGTTTCTGAT 59.231 37.500 0.00 0.00 0.00 2.90
5845 6576 0.179156 CGGGATGCATTGCACAGAAC 60.179 55.000 14.66 2.62 43.04 3.01
5847 6578 1.750018 CCGGGATGCATTGCACAGA 60.750 57.895 14.66 0.00 43.04 3.41
5922 6653 3.433748 CGGACACGAACTCGAACG 58.566 61.111 6.05 5.10 44.60 3.95
5949 6686 8.080417 CCTTGTTACTCTATTTCGATCCGAATA 58.920 37.037 2.53 0.00 45.28 1.75
5971 6708 6.618287 TCGCAATACATATCCTTTTCCTTG 57.382 37.500 0.00 0.00 0.00 3.61
5974 6711 4.083271 GGCTCGCAATACATATCCTTTTCC 60.083 45.833 0.00 0.00 0.00 3.13
5994 6731 0.619505 AAGATCTTGCTCTGCTGGCT 59.380 50.000 7.30 0.00 0.00 4.75
6004 6741 0.449388 CCTGCCGAACAAGATCTTGC 59.551 55.000 30.95 19.15 44.03 4.01
6026 6763 0.600782 TTCGCTTACCCGTGGTTGAC 60.601 55.000 0.72 0.00 37.09 3.18
6028 6765 0.446222 CATTCGCTTACCCGTGGTTG 59.554 55.000 0.72 0.00 37.09 3.77
6033 6770 1.019278 CACTGCATTCGCTTACCCGT 61.019 55.000 0.00 0.00 39.64 5.28
6035 6772 1.009829 CTCACTGCATTCGCTTACCC 58.990 55.000 0.00 0.00 39.64 3.69
6044 6781 0.399454 AGTCACTGGCTCACTGCATT 59.601 50.000 0.00 0.00 45.15 3.56
6063 6800 4.813697 CGTCACTGATCATGAGACTCTCTA 59.186 45.833 15.78 0.00 0.00 2.43
6080 6817 2.352814 GCCTGTGTGTAGAATCGTCACT 60.353 50.000 10.72 0.00 33.82 3.41
6084 6821 0.108804 CGGCCTGTGTGTAGAATCGT 60.109 55.000 0.00 0.00 0.00 3.73
6105 6842 3.897122 TTGTGGGTCACTGGCCCC 61.897 66.667 16.60 8.13 45.49 5.80
6106 6843 2.597510 GTTGTGGGTCACTGGCCC 60.598 66.667 12.32 12.32 46.26 5.80
6107 6844 0.755327 AAAGTTGTGGGTCACTGGCC 60.755 55.000 0.00 0.00 35.11 5.36
6108 6845 1.111277 AAAAGTTGTGGGTCACTGGC 58.889 50.000 0.00 0.00 35.11 4.85
6109 6846 1.408702 CCAAAAGTTGTGGGTCACTGG 59.591 52.381 3.86 0.00 35.11 4.00
6110 6847 2.374184 TCCAAAAGTTGTGGGTCACTG 58.626 47.619 12.37 0.00 36.73 3.66
6111 6848 2.818751 TCCAAAAGTTGTGGGTCACT 57.181 45.000 12.37 0.00 36.73 3.41
6112 6849 3.878160 TTTCCAAAAGTTGTGGGTCAC 57.122 42.857 12.37 0.00 36.73 3.67
6113 6850 4.467795 TGATTTTCCAAAAGTTGTGGGTCA 59.532 37.500 12.37 8.77 36.73 4.02
6114 6851 5.017294 TGATTTTCCAAAAGTTGTGGGTC 57.983 39.130 12.37 6.51 36.73 4.46
6115 6852 5.628797 ATGATTTTCCAAAAGTTGTGGGT 57.371 34.783 12.37 0.00 36.73 4.51
6116 6853 5.469760 GGAATGATTTTCCAAAAGTTGTGGG 59.530 40.000 12.37 0.00 38.45 4.61
6117 6854 6.054295 TGGAATGATTTTCCAAAAGTTGTGG 58.946 36.000 5.63 5.63 44.90 4.17
6142 6879 2.576648 AGGAGCCGAACCCTCTATTTTT 59.423 45.455 0.00 0.00 0.00 1.94
6143 6880 2.170817 GAGGAGCCGAACCCTCTATTTT 59.829 50.000 0.00 0.00 44.23 1.82
6144 6881 1.763545 GAGGAGCCGAACCCTCTATTT 59.236 52.381 0.00 0.00 44.23 1.40
6145 6882 1.415200 GAGGAGCCGAACCCTCTATT 58.585 55.000 0.00 0.00 44.23 1.73
6146 6883 3.135027 GAGGAGCCGAACCCTCTAT 57.865 57.895 0.00 0.00 44.23 1.98
6147 6884 4.680487 GAGGAGCCGAACCCTCTA 57.320 61.111 0.00 0.00 44.23 2.43
6150 6887 3.394836 GCAGAGGAGCCGAACCCT 61.395 66.667 0.00 0.00 35.02 4.34
6157 6894 1.831580 AGTTCAATTGCAGAGGAGCC 58.168 50.000 0.00 0.00 0.00 4.70
6169 6906 5.655532 AGTACCCGTACAGTGATAGTTCAAT 59.344 40.000 7.69 0.00 38.48 2.57
6214 6951 7.120432 GGAAGGAGAACCATCAGATTATAATGC 59.880 40.741 1.78 0.00 35.82 3.56
6319 7057 4.899239 CCGCATCAGGCCTCCGAC 62.899 72.222 0.00 0.00 40.31 4.79
6334 7072 1.078426 CCCCAAGAACTACTGGCCG 60.078 63.158 0.00 0.00 0.00 6.13
6443 8794 2.041115 GGCTTCTTCCTTCCGCCAC 61.041 63.158 0.00 0.00 40.41 5.01
6444 8795 2.351276 GGCTTCTTCCTTCCGCCA 59.649 61.111 0.00 0.00 40.41 5.69
6460 8811 1.081892 CTGTCCTGTCAAAGCATCGG 58.918 55.000 0.00 0.00 0.00 4.18
6478 8830 5.071653 GGAAGGCTCTCATTTCTTCCTATCT 59.928 44.000 12.21 0.00 46.99 1.98
6482 8834 3.643199 GGAAGGCTCTCATTTCTTCCT 57.357 47.619 12.21 0.00 46.99 3.36
6501 8853 3.173668 TCCACCGTTTAATCTCATCGG 57.826 47.619 0.00 0.00 45.53 4.18
6513 8865 2.264005 TACTTGCACAATCCACCGTT 57.736 45.000 0.00 0.00 0.00 4.44
6514 8866 2.027192 AGATACTTGCACAATCCACCGT 60.027 45.455 0.00 0.00 0.00 4.83
6515 8867 2.352651 CAGATACTTGCACAATCCACCG 59.647 50.000 0.00 0.00 0.00 4.94
6516 8868 3.347216 ACAGATACTTGCACAATCCACC 58.653 45.455 0.00 0.00 0.00 4.61
6517 8869 4.332819 GGTACAGATACTTGCACAATCCAC 59.667 45.833 0.00 0.00 0.00 4.02
6518 8870 4.513442 GGTACAGATACTTGCACAATCCA 58.487 43.478 0.00 0.00 0.00 3.41
6519 8871 3.555956 CGGTACAGATACTTGCACAATCC 59.444 47.826 0.00 0.00 0.00 3.01
6520 8872 3.555956 CCGGTACAGATACTTGCACAATC 59.444 47.826 0.00 0.00 0.00 2.67
6521 8873 3.055385 ACCGGTACAGATACTTGCACAAT 60.055 43.478 4.49 0.00 0.00 2.71
6522 8874 2.300723 ACCGGTACAGATACTTGCACAA 59.699 45.455 4.49 0.00 0.00 3.33
6523 8875 1.897133 ACCGGTACAGATACTTGCACA 59.103 47.619 4.49 0.00 0.00 4.57
6524 8876 2.268298 CACCGGTACAGATACTTGCAC 58.732 52.381 6.87 0.00 0.00 4.57
6525 8877 1.897133 ACACCGGTACAGATACTTGCA 59.103 47.619 6.87 0.00 0.00 4.08
6526 8878 2.667473 ACACCGGTACAGATACTTGC 57.333 50.000 6.87 0.00 0.00 4.01
6527 8879 4.978083 ACTACACCGGTACAGATACTTG 57.022 45.455 18.81 1.02 0.00 3.16
6528 8880 8.624776 GTTATTACTACACCGGTACAGATACTT 58.375 37.037 18.81 1.80 0.00 2.24
6529 8881 7.775093 TGTTATTACTACACCGGTACAGATACT 59.225 37.037 18.81 2.12 0.00 2.12
6530 8882 7.930217 TGTTATTACTACACCGGTACAGATAC 58.070 38.462 18.81 10.18 0.00 2.24
6531 8883 8.570488 CATGTTATTACTACACCGGTACAGATA 58.430 37.037 18.81 6.73 0.00 1.98
6532 8884 7.286087 TCATGTTATTACTACACCGGTACAGAT 59.714 37.037 18.81 7.55 0.00 2.90
6533 8885 6.602803 TCATGTTATTACTACACCGGTACAGA 59.397 38.462 18.81 8.38 0.00 3.41
6534 8886 6.694411 GTCATGTTATTACTACACCGGTACAG 59.306 42.308 6.87 10.19 0.00 2.74
6535 8887 6.377996 AGTCATGTTATTACTACACCGGTACA 59.622 38.462 6.87 4.90 0.00 2.90
6536 8888 6.694411 CAGTCATGTTATTACTACACCGGTAC 59.306 42.308 6.87 0.00 0.00 3.34
6537 8889 6.377996 ACAGTCATGTTATTACTACACCGGTA 59.622 38.462 6.87 0.00 35.63 4.02
6538 8890 5.186409 ACAGTCATGTTATTACTACACCGGT 59.814 40.000 0.00 0.00 35.63 5.28
6539 8891 5.657474 ACAGTCATGTTATTACTACACCGG 58.343 41.667 0.00 0.00 35.63 5.28
6540 8892 6.412943 CGTACAGTCATGTTATTACTACACCG 59.587 42.308 0.00 0.00 41.01 4.94
6541 8893 7.430502 GTCGTACAGTCATGTTATTACTACACC 59.569 40.741 0.00 0.00 41.01 4.16
6542 8894 8.180267 AGTCGTACAGTCATGTTATTACTACAC 58.820 37.037 0.00 0.00 41.01 2.90
6543 8895 8.272545 AGTCGTACAGTCATGTTATTACTACA 57.727 34.615 0.00 0.00 41.01 2.74
6544 8896 9.861138 CTAGTCGTACAGTCATGTTATTACTAC 57.139 37.037 0.00 0.00 41.01 2.73
6545 8897 8.554528 GCTAGTCGTACAGTCATGTTATTACTA 58.445 37.037 0.00 0.00 41.01 1.82
6546 8898 7.416022 GCTAGTCGTACAGTCATGTTATTACT 58.584 38.462 0.00 0.00 41.01 2.24
6547 8899 6.636044 GGCTAGTCGTACAGTCATGTTATTAC 59.364 42.308 0.00 0.00 41.01 1.89
6548 8900 6.319405 TGGCTAGTCGTACAGTCATGTTATTA 59.681 38.462 0.00 0.00 41.01 0.98
6549 8901 5.126545 TGGCTAGTCGTACAGTCATGTTATT 59.873 40.000 0.00 0.00 41.01 1.40
6550 8902 4.643334 TGGCTAGTCGTACAGTCATGTTAT 59.357 41.667 0.00 0.00 41.01 1.89
6551 8903 4.011698 TGGCTAGTCGTACAGTCATGTTA 58.988 43.478 0.00 0.00 41.01 2.41
6552 8904 2.823747 TGGCTAGTCGTACAGTCATGTT 59.176 45.455 0.00 0.00 41.01 2.71
6553 8905 2.163815 GTGGCTAGTCGTACAGTCATGT 59.836 50.000 0.00 0.00 43.76 3.21
6554 8906 2.163613 TGTGGCTAGTCGTACAGTCATG 59.836 50.000 0.00 0.00 0.00 3.07
6555 8907 2.423892 CTGTGGCTAGTCGTACAGTCAT 59.576 50.000 6.65 0.00 36.63 3.06
6556 8908 1.810755 CTGTGGCTAGTCGTACAGTCA 59.189 52.381 6.65 0.00 36.63 3.41
6557 8909 2.546195 CTGTGGCTAGTCGTACAGTC 57.454 55.000 6.65 0.00 36.63 3.51
6558 8910 1.906990 ACTGTGGCTAGTCGTACAGT 58.093 50.000 13.21 13.21 46.33 3.55
6559 8911 1.135373 CCACTGTGGCTAGTCGTACAG 60.135 57.143 14.87 12.05 44.52 2.74
6560 8912 0.885879 CCACTGTGGCTAGTCGTACA 59.114 55.000 14.87 0.00 0.00 2.90
6561 8913 0.172803 CCCACTGTGGCTAGTCGTAC 59.827 60.000 21.47 0.00 35.79 3.67
6562 8914 0.038599 TCCCACTGTGGCTAGTCGTA 59.961 55.000 21.47 0.00 35.79 3.43
6563 8915 1.228769 TCCCACTGTGGCTAGTCGT 60.229 57.895 21.47 0.00 35.79 4.34
6564 8916 1.251527 ACTCCCACTGTGGCTAGTCG 61.252 60.000 21.47 6.74 35.79 4.18
6565 8917 1.848652 TACTCCCACTGTGGCTAGTC 58.151 55.000 26.56 0.00 35.79 2.59
6566 8918 2.023888 AGATACTCCCACTGTGGCTAGT 60.024 50.000 26.22 26.22 35.79 2.57
6567 8919 2.672098 AGATACTCCCACTGTGGCTAG 58.328 52.381 21.47 20.51 35.79 3.42
6568 8920 2.848678 AGATACTCCCACTGTGGCTA 57.151 50.000 21.47 10.31 35.79 3.93
6569 8921 1.834263 GAAGATACTCCCACTGTGGCT 59.166 52.381 21.47 8.83 35.79 4.75
6570 8922 1.471676 CGAAGATACTCCCACTGTGGC 60.472 57.143 21.47 6.54 35.79 5.01
6571 8923 1.137086 CCGAAGATACTCCCACTGTGG 59.863 57.143 20.01 20.01 37.25 4.17
6572 8924 1.825474 ACCGAAGATACTCCCACTGTG 59.175 52.381 0.00 0.00 0.00 3.66
6573 8925 2.233305 ACCGAAGATACTCCCACTGT 57.767 50.000 0.00 0.00 0.00 3.55
6574 8926 3.288964 ACTACCGAAGATACTCCCACTG 58.711 50.000 0.00 0.00 0.00 3.66
6575 8927 3.666345 ACTACCGAAGATACTCCCACT 57.334 47.619 0.00 0.00 0.00 4.00
6576 8928 4.641989 TGTTACTACCGAAGATACTCCCAC 59.358 45.833 0.00 0.00 0.00 4.61
6577 8929 4.858850 TGTTACTACCGAAGATACTCCCA 58.141 43.478 0.00 0.00 0.00 4.37
6578 8930 5.334724 CGATGTTACTACCGAAGATACTCCC 60.335 48.000 0.00 0.00 0.00 4.30
6579 8931 5.468072 TCGATGTTACTACCGAAGATACTCC 59.532 44.000 0.00 0.00 0.00 3.85
6580 8932 6.202570 ACTCGATGTTACTACCGAAGATACTC 59.797 42.308 0.00 0.00 0.00 2.59
6581 8933 6.054295 ACTCGATGTTACTACCGAAGATACT 58.946 40.000 0.00 0.00 0.00 2.12
6582 8934 6.297694 ACTCGATGTTACTACCGAAGATAC 57.702 41.667 0.00 0.00 0.00 2.24
6583 8935 5.468072 GGACTCGATGTTACTACCGAAGATA 59.532 44.000 0.00 0.00 0.00 1.98
6584 8936 4.275443 GGACTCGATGTTACTACCGAAGAT 59.725 45.833 0.00 0.00 0.00 2.40
6585 8937 3.624861 GGACTCGATGTTACTACCGAAGA 59.375 47.826 0.00 0.00 0.00 2.87
6586 8938 3.376234 TGGACTCGATGTTACTACCGAAG 59.624 47.826 0.00 0.00 0.00 3.79
6587 8939 3.346315 TGGACTCGATGTTACTACCGAA 58.654 45.455 0.00 0.00 0.00 4.30
6588 8940 2.989909 TGGACTCGATGTTACTACCGA 58.010 47.619 0.00 0.00 0.00 4.69
6589 8941 3.432782 GTTGGACTCGATGTTACTACCG 58.567 50.000 0.00 0.00 0.00 4.02
6590 8942 3.429960 GGGTTGGACTCGATGTTACTACC 60.430 52.174 0.00 1.55 34.09 3.18
6591 8943 3.194116 TGGGTTGGACTCGATGTTACTAC 59.806 47.826 0.00 0.00 0.00 2.73
6592 8944 3.433343 TGGGTTGGACTCGATGTTACTA 58.567 45.455 0.00 0.00 0.00 1.82
6593 8945 2.253610 TGGGTTGGACTCGATGTTACT 58.746 47.619 0.00 0.00 0.00 2.24
6594 8946 2.754946 TGGGTTGGACTCGATGTTAC 57.245 50.000 0.00 0.00 0.00 2.50
6595 8947 3.992943 ATTGGGTTGGACTCGATGTTA 57.007 42.857 0.00 0.00 0.00 2.41
6596 8948 2.879103 ATTGGGTTGGACTCGATGTT 57.121 45.000 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.