Multiple sequence alignment - TraesCS4B01G185700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G185700 chr4B 100.000 2709 0 0 1 2709 405369201 405371909 0.000000e+00 5003.0
1 TraesCS4B01G185700 chr4B 91.525 59 3 2 1 58 193414224 193414281 2.240000e-11 80.5
2 TraesCS4B01G185700 chr4D 86.951 1502 60 50 583 1972 325100833 325102310 0.000000e+00 1563.0
3 TraesCS4B01G185700 chr4D 91.263 744 38 9 1975 2709 325102348 325103073 0.000000e+00 989.0
4 TraesCS4B01G185700 chr4A 93.342 736 28 8 1976 2709 146558931 146558215 0.000000e+00 1068.0
5 TraesCS4B01G185700 chr4A 87.817 829 50 26 914 1709 146561924 146561114 0.000000e+00 924.0
6 TraesCS4B01G185700 chr4A 85.990 414 31 16 513 908 146562379 146561975 4.170000e-113 418.0
7 TraesCS4B01G185700 chr4A 89.744 195 8 4 1726 1908 146560829 146560635 3.490000e-59 239.0
8 TraesCS4B01G185700 chr4A 90.000 110 9 2 48 156 146677910 146677802 1.010000e-29 141.0
9 TraesCS4B01G185700 chr4A 94.048 84 5 0 626 709 675226807 675226724 7.870000e-26 128.0
10 TraesCS4B01G185700 chr4A 94.643 56 0 1 1920 1972 146559025 146558970 1.730000e-12 84.2
11 TraesCS4B01G185700 chr7D 97.788 226 5 0 1309 1534 12550241 12550016 9.090000e-105 390.0
12 TraesCS4B01G185700 chr5D 94.186 86 5 0 624 709 428498641 428498556 6.090000e-27 132.0
13 TraesCS4B01G185700 chrUn 94.048 84 5 0 626 709 330523663 330523580 7.870000e-26 128.0
14 TraesCS4B01G185700 chrUn 94.048 84 5 0 626 709 376008271 376008354 7.870000e-26 128.0
15 TraesCS4B01G185700 chr7A 96.104 77 3 0 623 699 47052755 47052831 2.830000e-25 126.0
16 TraesCS4B01G185700 chr7A 93.103 58 1 3 1 56 599517131 599517075 6.220000e-12 82.4
17 TraesCS4B01G185700 chr7A 87.879 66 7 1 1 65 152148870 152148935 2.890000e-10 76.8
18 TraesCS4B01G185700 chr6B 92.135 89 7 0 624 712 60656036 60656124 2.830000e-25 126.0
19 TraesCS4B01G185700 chr3D 92.308 91 3 3 626 713 532236225 532236136 2.830000e-25 126.0
20 TraesCS4B01G185700 chr5A 89.394 66 5 2 1 64 125860970 125861035 6.220000e-12 82.4
21 TraesCS4B01G185700 chr5A 90.625 64 3 3 1 61 158427333 158427270 6.220000e-12 82.4
22 TraesCS4B01G185700 chr5A 90.476 63 4 2 1 61 158539148 158539086 6.220000e-12 82.4
23 TraesCS4B01G185700 chr3A 91.667 60 3 2 1 58 435758482 435758423 6.220000e-12 82.4
24 TraesCS4B01G185700 chr3A 92.982 57 0 4 1 56 552437791 552437844 2.240000e-11 80.5
25 TraesCS4B01G185700 chr7B 87.879 66 4 4 1 63 524965592 524965656 1.040000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G185700 chr4B 405369201 405371909 2708 False 5003.00 5003 100.0000 1 2709 1 chr4B.!!$F2 2708
1 TraesCS4B01G185700 chr4D 325100833 325103073 2240 False 1276.00 1563 89.1070 583 2709 2 chr4D.!!$F1 2126
2 TraesCS4B01G185700 chr4A 146558215 146562379 4164 True 546.64 1068 90.3072 513 2709 5 chr4A.!!$R3 2196

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
31 32 0.042731 CCCCCTCCTCTAGTCAACCA 59.957 60.0 0.0 0.0 0.0 3.67 F
193 194 0.113385 TTTTCCGGCCCATCTTTCCA 59.887 50.0 0.0 0.0 0.0 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1586 1732 0.182061 TAGATGTCCGGGTAGTCGCT 59.818 55.000 0.0 0.0 0.00 4.93 R
1712 1864 1.204467 AGCTGCTGAGAAGTGAGCTAC 59.796 52.381 0.0 0.0 38.23 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.917804 CCCCCTCCTCTAGTCAACC 58.082 63.158 0.00 0.00 0.00 3.77
31 32 0.042731 CCCCCTCCTCTAGTCAACCA 59.957 60.000 0.00 0.00 0.00 3.67
32 33 1.344496 CCCCCTCCTCTAGTCAACCAT 60.344 57.143 0.00 0.00 0.00 3.55
33 34 2.090719 CCCCCTCCTCTAGTCAACCATA 60.091 54.545 0.00 0.00 0.00 2.74
34 35 3.440154 CCCCCTCCTCTAGTCAACCATAT 60.440 52.174 0.00 0.00 0.00 1.78
35 36 3.835395 CCCCTCCTCTAGTCAACCATATC 59.165 52.174 0.00 0.00 0.00 1.63
36 37 3.508012 CCCTCCTCTAGTCAACCATATCG 59.492 52.174 0.00 0.00 0.00 2.92
37 38 4.399219 CCTCCTCTAGTCAACCATATCGA 58.601 47.826 0.00 0.00 0.00 3.59
38 39 5.013547 CCTCCTCTAGTCAACCATATCGAT 58.986 45.833 2.16 2.16 0.00 3.59
39 40 5.124776 CCTCCTCTAGTCAACCATATCGATC 59.875 48.000 0.00 0.00 0.00 3.69
40 41 5.010933 TCCTCTAGTCAACCATATCGATCC 58.989 45.833 0.00 0.00 0.00 3.36
41 42 5.013547 CCTCTAGTCAACCATATCGATCCT 58.986 45.833 0.00 0.00 0.00 3.24
42 43 5.478679 CCTCTAGTCAACCATATCGATCCTT 59.521 44.000 0.00 0.00 0.00 3.36
43 44 6.015010 CCTCTAGTCAACCATATCGATCCTTT 60.015 42.308 0.00 0.00 0.00 3.11
44 45 6.982852 TCTAGTCAACCATATCGATCCTTTC 58.017 40.000 0.00 0.00 0.00 2.62
45 46 5.614324 AGTCAACCATATCGATCCTTTCA 57.386 39.130 0.00 0.00 0.00 2.69
46 47 5.989477 AGTCAACCATATCGATCCTTTCAA 58.011 37.500 0.00 0.00 0.00 2.69
47 48 5.817816 AGTCAACCATATCGATCCTTTCAAC 59.182 40.000 0.00 0.00 0.00 3.18
48 49 5.817816 GTCAACCATATCGATCCTTTCAACT 59.182 40.000 0.00 0.00 0.00 3.16
49 50 6.316390 GTCAACCATATCGATCCTTTCAACTT 59.684 38.462 0.00 0.00 0.00 2.66
50 51 6.316140 TCAACCATATCGATCCTTTCAACTTG 59.684 38.462 0.00 0.00 0.00 3.16
51 52 5.989477 ACCATATCGATCCTTTCAACTTGA 58.011 37.500 0.00 0.00 0.00 3.02
52 53 6.595682 ACCATATCGATCCTTTCAACTTGAT 58.404 36.000 0.00 0.00 0.00 2.57
53 54 7.056635 ACCATATCGATCCTTTCAACTTGATT 58.943 34.615 0.00 0.00 0.00 2.57
54 55 7.227512 ACCATATCGATCCTTTCAACTTGATTC 59.772 37.037 0.00 0.00 0.00 2.52
55 56 7.227314 CCATATCGATCCTTTCAACTTGATTCA 59.773 37.037 0.00 0.00 0.00 2.57
56 57 8.615211 CATATCGATCCTTTCAACTTGATTCAA 58.385 33.333 0.00 0.00 0.00 2.69
57 58 6.875948 TCGATCCTTTCAACTTGATTCAAA 57.124 33.333 0.01 0.00 0.00 2.69
58 59 7.270757 TCGATCCTTTCAACTTGATTCAAAA 57.729 32.000 0.01 0.00 0.00 2.44
59 60 7.362662 TCGATCCTTTCAACTTGATTCAAAAG 58.637 34.615 0.01 1.31 0.00 2.27
60 61 7.228507 TCGATCCTTTCAACTTGATTCAAAAGA 59.771 33.333 8.63 1.64 0.00 2.52
61 62 7.324616 CGATCCTTTCAACTTGATTCAAAAGAC 59.675 37.037 8.63 1.97 0.00 3.01
62 63 7.645058 TCCTTTCAACTTGATTCAAAAGACT 57.355 32.000 8.63 0.00 0.00 3.24
63 64 8.066612 TCCTTTCAACTTGATTCAAAAGACTT 57.933 30.769 8.63 0.00 0.00 3.01
64 65 8.531146 TCCTTTCAACTTGATTCAAAAGACTTT 58.469 29.630 8.63 0.00 0.00 2.66
65 66 9.801873 CCTTTCAACTTGATTCAAAAGACTTTA 57.198 29.630 0.00 0.00 0.00 1.85
69 70 9.567848 TCAACTTGATTCAAAAGACTTTACAAC 57.432 29.630 0.00 0.00 0.00 3.32
70 71 9.352784 CAACTTGATTCAAAAGACTTTACAACA 57.647 29.630 0.00 0.00 0.00 3.33
71 72 9.921637 AACTTGATTCAAAAGACTTTACAACAA 57.078 25.926 0.00 4.59 0.00 2.83
72 73 9.573133 ACTTGATTCAAAAGACTTTACAACAAG 57.427 29.630 20.30 20.30 35.93 3.16
73 74 9.787532 CTTGATTCAAAAGACTTTACAACAAGA 57.212 29.630 18.79 3.72 33.03 3.02
150 151 8.437274 AGAGGAGTATTTTTAGAGAAACAGGA 57.563 34.615 0.00 0.00 0.00 3.86
151 152 9.052365 AGAGGAGTATTTTTAGAGAAACAGGAT 57.948 33.333 0.00 0.00 0.00 3.24
166 167 9.267084 GAGAAACAGGATAGAAATGTAATCCTC 57.733 37.037 0.10 0.00 45.06 3.71
167 168 8.772250 AGAAACAGGATAGAAATGTAATCCTCA 58.228 33.333 0.10 0.00 45.06 3.86
168 169 9.566432 GAAACAGGATAGAAATGTAATCCTCAT 57.434 33.333 0.10 0.00 45.06 2.90
180 181 7.969536 ATGTAATCCTCATATCTGTTTTCCG 57.030 36.000 0.00 0.00 0.00 4.30
181 182 6.288294 TGTAATCCTCATATCTGTTTTCCGG 58.712 40.000 0.00 0.00 0.00 5.14
182 183 3.194005 TCCTCATATCTGTTTTCCGGC 57.806 47.619 0.00 0.00 0.00 6.13
183 184 2.158813 TCCTCATATCTGTTTTCCGGCC 60.159 50.000 0.00 0.00 0.00 6.13
184 185 2.222027 CTCATATCTGTTTTCCGGCCC 58.778 52.381 0.00 0.00 0.00 5.80
185 186 1.562008 TCATATCTGTTTTCCGGCCCA 59.438 47.619 0.00 0.00 0.00 5.36
186 187 2.174639 TCATATCTGTTTTCCGGCCCAT 59.825 45.455 0.00 0.00 0.00 4.00
187 188 2.341846 TATCTGTTTTCCGGCCCATC 57.658 50.000 0.00 0.00 0.00 3.51
188 189 0.625849 ATCTGTTTTCCGGCCCATCT 59.374 50.000 0.00 0.00 0.00 2.90
189 190 0.404040 TCTGTTTTCCGGCCCATCTT 59.596 50.000 0.00 0.00 0.00 2.40
190 191 1.203001 TCTGTTTTCCGGCCCATCTTT 60.203 47.619 0.00 0.00 0.00 2.52
191 192 1.202348 CTGTTTTCCGGCCCATCTTTC 59.798 52.381 0.00 0.00 0.00 2.62
192 193 0.530744 GTTTTCCGGCCCATCTTTCC 59.469 55.000 0.00 0.00 0.00 3.13
193 194 0.113385 TTTTCCGGCCCATCTTTCCA 59.887 50.000 0.00 0.00 0.00 3.53
194 195 0.610785 TTTCCGGCCCATCTTTCCAC 60.611 55.000 0.00 0.00 0.00 4.02
195 196 2.440247 CCGGCCCATCTTTCCACC 60.440 66.667 0.00 0.00 0.00 4.61
196 197 2.677228 CGGCCCATCTTTCCACCT 59.323 61.111 0.00 0.00 0.00 4.00
197 198 1.452108 CGGCCCATCTTTCCACCTC 60.452 63.158 0.00 0.00 0.00 3.85
198 199 1.691219 GGCCCATCTTTCCACCTCA 59.309 57.895 0.00 0.00 0.00 3.86
199 200 0.394899 GGCCCATCTTTCCACCTCAG 60.395 60.000 0.00 0.00 0.00 3.35
200 201 1.034292 GCCCATCTTTCCACCTCAGC 61.034 60.000 0.00 0.00 0.00 4.26
201 202 0.329261 CCCATCTTTCCACCTCAGCA 59.671 55.000 0.00 0.00 0.00 4.41
202 203 1.064166 CCCATCTTTCCACCTCAGCAT 60.064 52.381 0.00 0.00 0.00 3.79
203 204 2.622452 CCCATCTTTCCACCTCAGCATT 60.622 50.000 0.00 0.00 0.00 3.56
204 205 3.371917 CCCATCTTTCCACCTCAGCATTA 60.372 47.826 0.00 0.00 0.00 1.90
205 206 4.272489 CCATCTTTCCACCTCAGCATTAA 58.728 43.478 0.00 0.00 0.00 1.40
206 207 4.706476 CCATCTTTCCACCTCAGCATTAAA 59.294 41.667 0.00 0.00 0.00 1.52
207 208 5.393461 CCATCTTTCCACCTCAGCATTAAAC 60.393 44.000 0.00 0.00 0.00 2.01
208 209 4.079253 TCTTTCCACCTCAGCATTAAACC 58.921 43.478 0.00 0.00 0.00 3.27
209 210 2.507407 TCCACCTCAGCATTAAACCC 57.493 50.000 0.00 0.00 0.00 4.11
210 211 1.707989 TCCACCTCAGCATTAAACCCA 59.292 47.619 0.00 0.00 0.00 4.51
211 212 2.109128 TCCACCTCAGCATTAAACCCAA 59.891 45.455 0.00 0.00 0.00 4.12
212 213 2.896685 CCACCTCAGCATTAAACCCAAA 59.103 45.455 0.00 0.00 0.00 3.28
213 214 3.323403 CCACCTCAGCATTAAACCCAAAA 59.677 43.478 0.00 0.00 0.00 2.44
214 215 4.306600 CACCTCAGCATTAAACCCAAAAC 58.693 43.478 0.00 0.00 0.00 2.43
215 216 4.039124 CACCTCAGCATTAAACCCAAAACT 59.961 41.667 0.00 0.00 0.00 2.66
216 217 4.280929 ACCTCAGCATTAAACCCAAAACTC 59.719 41.667 0.00 0.00 0.00 3.01
217 218 4.475944 CTCAGCATTAAACCCAAAACTCG 58.524 43.478 0.00 0.00 0.00 4.18
218 219 3.886505 TCAGCATTAAACCCAAAACTCGT 59.113 39.130 0.00 0.00 0.00 4.18
219 220 4.339814 TCAGCATTAAACCCAAAACTCGTT 59.660 37.500 0.00 0.00 0.00 3.85
220 221 4.679654 CAGCATTAAACCCAAAACTCGTTC 59.320 41.667 0.00 0.00 0.00 3.95
221 222 3.985279 GCATTAAACCCAAAACTCGTTCC 59.015 43.478 0.00 0.00 0.00 3.62
222 223 4.552355 CATTAAACCCAAAACTCGTTCCC 58.448 43.478 0.00 0.00 0.00 3.97
223 224 2.146920 AAACCCAAAACTCGTTCCCA 57.853 45.000 0.00 0.00 0.00 4.37
224 225 2.146920 AACCCAAAACTCGTTCCCAA 57.853 45.000 0.00 0.00 0.00 4.12
225 226 2.146920 ACCCAAAACTCGTTCCCAAA 57.853 45.000 0.00 0.00 0.00 3.28
226 227 2.673258 ACCCAAAACTCGTTCCCAAAT 58.327 42.857 0.00 0.00 0.00 2.32
227 228 2.364002 ACCCAAAACTCGTTCCCAAATG 59.636 45.455 0.00 0.00 0.00 2.32
228 229 2.288763 CCCAAAACTCGTTCCCAAATGG 60.289 50.000 0.00 0.00 0.00 3.16
229 230 2.403259 CAAAACTCGTTCCCAAATGGC 58.597 47.619 0.00 0.00 0.00 4.40
230 231 0.966179 AAACTCGTTCCCAAATGGCC 59.034 50.000 0.00 0.00 0.00 5.36
231 232 1.241315 AACTCGTTCCCAAATGGCCG 61.241 55.000 0.00 0.00 0.00 6.13
232 233 2.360600 TCGTTCCCAAATGGCCGG 60.361 61.111 0.00 0.00 0.00 6.13
233 234 3.448340 CGTTCCCAAATGGCCGGG 61.448 66.667 2.18 7.10 44.60 5.73
234 235 3.074369 GTTCCCAAATGGCCGGGG 61.074 66.667 13.04 13.46 43.29 5.73
242 243 2.283126 ATGGCCGGGGCATGAAAT 59.717 55.556 32.53 11.60 46.89 2.17
243 244 1.382971 ATGGCCGGGGCATGAAATT 60.383 52.632 32.53 10.82 46.89 1.82
244 245 1.402107 ATGGCCGGGGCATGAAATTC 61.402 55.000 32.53 0.00 46.89 2.17
245 246 2.057408 GGCCGGGGCATGAAATTCA 61.057 57.895 16.76 0.00 44.11 2.57
246 247 1.402107 GGCCGGGGCATGAAATTCAT 61.402 55.000 16.76 2.07 44.11 2.57
247 248 1.327303 GCCGGGGCATGAAATTCATA 58.673 50.000 8.29 0.00 34.28 2.15
248 249 1.270550 GCCGGGGCATGAAATTCATAG 59.729 52.381 8.29 4.85 34.28 2.23
249 250 2.862541 CCGGGGCATGAAATTCATAGA 58.137 47.619 8.29 0.00 34.28 1.98
250 251 2.816087 CCGGGGCATGAAATTCATAGAG 59.184 50.000 8.29 0.00 34.28 2.43
251 252 2.227388 CGGGGCATGAAATTCATAGAGC 59.773 50.000 8.29 8.06 34.28 4.09
252 253 3.225104 GGGGCATGAAATTCATAGAGCA 58.775 45.455 8.29 0.00 34.28 4.26
253 254 3.830755 GGGGCATGAAATTCATAGAGCAT 59.169 43.478 8.29 0.00 34.28 3.79
254 255 4.282703 GGGGCATGAAATTCATAGAGCATT 59.717 41.667 8.29 0.00 34.28 3.56
255 256 5.467705 GGGCATGAAATTCATAGAGCATTC 58.532 41.667 8.29 0.00 34.28 2.67
256 257 5.152097 GGCATGAAATTCATAGAGCATTCG 58.848 41.667 8.29 0.00 34.28 3.34
257 258 5.278169 GGCATGAAATTCATAGAGCATTCGT 60.278 40.000 8.29 0.00 34.28 3.85
258 259 6.204359 GCATGAAATTCATAGAGCATTCGTT 58.796 36.000 8.29 0.00 34.28 3.85
259 260 6.694411 GCATGAAATTCATAGAGCATTCGTTT 59.306 34.615 8.29 0.00 34.28 3.60
260 261 7.857389 GCATGAAATTCATAGAGCATTCGTTTA 59.143 33.333 8.29 0.00 34.28 2.01
261 262 9.720667 CATGAAATTCATAGAGCATTCGTTTAA 57.279 29.630 8.29 0.00 34.28 1.52
263 264 9.720667 TGAAATTCATAGAGCATTCGTTTAATG 57.279 29.630 0.00 0.00 46.62 1.90
264 265 9.722056 GAAATTCATAGAGCATTCGTTTAATGT 57.278 29.630 0.00 0.00 45.78 2.71
265 266 9.507280 AAATTCATAGAGCATTCGTTTAATGTG 57.493 29.630 0.00 0.00 45.78 3.21
266 267 6.048073 TCATAGAGCATTCGTTTAATGTGC 57.952 37.500 0.00 0.00 45.78 4.57
267 268 3.764885 AGAGCATTCGTTTAATGTGCC 57.235 42.857 0.00 0.00 45.78 5.01
268 269 3.347216 AGAGCATTCGTTTAATGTGCCT 58.653 40.909 0.00 0.00 45.78 4.75
269 270 3.758554 AGAGCATTCGTTTAATGTGCCTT 59.241 39.130 0.00 0.00 45.78 4.35
270 271 4.218417 AGAGCATTCGTTTAATGTGCCTTT 59.782 37.500 0.00 0.00 45.78 3.11
271 272 4.236935 AGCATTCGTTTAATGTGCCTTTG 58.763 39.130 0.00 0.00 45.78 2.77
272 273 3.181531 GCATTCGTTTAATGTGCCTTTGC 60.182 43.478 0.00 0.00 45.78 3.68
273 274 4.236935 CATTCGTTTAATGTGCCTTTGCT 58.763 39.130 0.00 0.00 40.19 3.91
274 275 3.552604 TCGTTTAATGTGCCTTTGCTC 57.447 42.857 0.00 0.00 38.71 4.26
275 276 2.881513 TCGTTTAATGTGCCTTTGCTCA 59.118 40.909 0.00 0.00 44.31 4.26
276 277 3.316588 TCGTTTAATGTGCCTTTGCTCAA 59.683 39.130 0.00 0.00 43.51 3.02
277 278 4.047822 CGTTTAATGTGCCTTTGCTCAAA 58.952 39.130 0.00 0.00 43.51 2.69
278 279 4.505922 CGTTTAATGTGCCTTTGCTCAAAA 59.494 37.500 0.00 0.00 43.51 2.44
279 280 5.006165 CGTTTAATGTGCCTTTGCTCAAAAA 59.994 36.000 0.00 0.00 43.51 1.94
305 306 9.673454 AAAAAGAACGTTTAGTGGACAATTATC 57.327 29.630 0.46 0.00 0.00 1.75
306 307 6.642683 AGAACGTTTAGTGGACAATTATCG 57.357 37.500 0.46 0.00 0.00 2.92
307 308 6.161381 AGAACGTTTAGTGGACAATTATCGT 58.839 36.000 0.46 0.00 0.00 3.73
308 309 6.309737 AGAACGTTTAGTGGACAATTATCGTC 59.690 38.462 0.46 0.00 0.00 4.20
313 314 2.613390 GGACAATTATCGTCCGGCC 58.387 57.895 0.00 0.00 43.36 6.13
314 315 0.883370 GGACAATTATCGTCCGGCCC 60.883 60.000 0.00 0.00 43.36 5.80
315 316 0.179067 GACAATTATCGTCCGGCCCA 60.179 55.000 0.00 0.00 0.00 5.36
316 317 0.179056 ACAATTATCGTCCGGCCCAG 60.179 55.000 0.00 0.00 0.00 4.45
317 318 1.227853 AATTATCGTCCGGCCCAGC 60.228 57.895 0.00 0.00 0.00 4.85
318 319 1.978455 AATTATCGTCCGGCCCAGCA 61.978 55.000 0.00 0.00 0.00 4.41
319 320 2.660258 ATTATCGTCCGGCCCAGCAC 62.660 60.000 0.00 0.00 0.00 4.40
323 324 4.329545 GTCCGGCCCAGCACAGAA 62.330 66.667 0.00 0.00 0.00 3.02
324 325 4.329545 TCCGGCCCAGCACAGAAC 62.330 66.667 0.00 0.00 0.00 3.01
325 326 4.335647 CCGGCCCAGCACAGAACT 62.336 66.667 0.00 0.00 0.00 3.01
326 327 2.281761 CGGCCCAGCACAGAACTT 60.282 61.111 0.00 0.00 0.00 2.66
327 328 2.620112 CGGCCCAGCACAGAACTTG 61.620 63.158 0.00 0.00 0.00 3.16
328 329 1.529244 GGCCCAGCACAGAACTTGT 60.529 57.895 0.00 0.00 41.94 3.16
329 330 1.109323 GGCCCAGCACAGAACTTGTT 61.109 55.000 0.00 0.00 38.16 2.83
330 331 0.312102 GCCCAGCACAGAACTTGTTC 59.688 55.000 5.44 5.44 38.16 3.18
331 332 1.972872 CCCAGCACAGAACTTGTTCT 58.027 50.000 9.93 9.93 38.16 3.01
332 333 1.876156 CCCAGCACAGAACTTGTTCTC 59.124 52.381 12.51 3.38 38.16 2.87
333 334 1.876156 CCAGCACAGAACTTGTTCTCC 59.124 52.381 12.51 5.45 38.16 3.71
334 335 1.876156 CAGCACAGAACTTGTTCTCCC 59.124 52.381 12.51 5.15 38.16 4.30
335 336 1.490490 AGCACAGAACTTGTTCTCCCA 59.510 47.619 12.51 0.00 38.16 4.37
336 337 2.107204 AGCACAGAACTTGTTCTCCCAT 59.893 45.455 12.51 0.00 38.16 4.00
337 338 2.887152 GCACAGAACTTGTTCTCCCATT 59.113 45.455 12.51 0.00 38.16 3.16
338 339 3.304928 GCACAGAACTTGTTCTCCCATTG 60.305 47.826 12.51 5.15 38.16 2.82
339 340 3.885297 CACAGAACTTGTTCTCCCATTGT 59.115 43.478 12.51 5.71 38.16 2.71
340 341 4.023707 CACAGAACTTGTTCTCCCATTGTC 60.024 45.833 12.51 0.00 38.16 3.18
341 342 4.136796 CAGAACTTGTTCTCCCATTGTCA 58.863 43.478 12.51 0.00 0.00 3.58
342 343 4.763793 CAGAACTTGTTCTCCCATTGTCAT 59.236 41.667 12.51 0.00 0.00 3.06
343 344 5.242393 CAGAACTTGTTCTCCCATTGTCATT 59.758 40.000 12.51 0.00 0.00 2.57
344 345 6.430925 CAGAACTTGTTCTCCCATTGTCATTA 59.569 38.462 12.51 0.00 0.00 1.90
345 346 7.004086 AGAACTTGTTCTCCCATTGTCATTAA 58.996 34.615 9.93 0.00 0.00 1.40
346 347 6.824305 ACTTGTTCTCCCATTGTCATTAAG 57.176 37.500 0.00 0.00 0.00 1.85
347 348 5.711976 ACTTGTTCTCCCATTGTCATTAAGG 59.288 40.000 0.00 0.00 0.00 2.69
348 349 4.016444 TGTTCTCCCATTGTCATTAAGGC 58.984 43.478 0.00 0.00 0.00 4.35
349 350 4.263905 TGTTCTCCCATTGTCATTAAGGCT 60.264 41.667 0.00 0.00 0.00 4.58
350 351 4.591321 TCTCCCATTGTCATTAAGGCTT 57.409 40.909 4.58 4.58 0.00 4.35
351 352 4.934356 TCTCCCATTGTCATTAAGGCTTT 58.066 39.130 4.45 0.00 0.00 3.51
352 353 4.706476 TCTCCCATTGTCATTAAGGCTTTG 59.294 41.667 4.45 0.00 0.00 2.77
353 354 4.415596 TCCCATTGTCATTAAGGCTTTGT 58.584 39.130 4.45 0.00 0.00 2.83
354 355 5.575157 TCCCATTGTCATTAAGGCTTTGTA 58.425 37.500 4.45 0.00 0.00 2.41
355 356 6.013379 TCCCATTGTCATTAAGGCTTTGTAA 58.987 36.000 4.45 0.00 0.00 2.41
356 357 6.152661 TCCCATTGTCATTAAGGCTTTGTAAG 59.847 38.462 4.45 0.00 0.00 2.34
357 358 6.071391 CCCATTGTCATTAAGGCTTTGTAAGT 60.071 38.462 4.45 0.00 0.00 2.24
358 359 6.808212 CCATTGTCATTAAGGCTTTGTAAGTG 59.192 38.462 4.45 0.00 0.00 3.16
359 360 7.309133 CCATTGTCATTAAGGCTTTGTAAGTGA 60.309 37.037 4.45 0.00 0.00 3.41
360 361 7.575414 TTGTCATTAAGGCTTTGTAAGTGAA 57.425 32.000 4.45 0.00 0.00 3.18
361 362 6.966021 TGTCATTAAGGCTTTGTAAGTGAAC 58.034 36.000 4.45 0.00 0.00 3.18
362 363 6.544197 TGTCATTAAGGCTTTGTAAGTGAACA 59.456 34.615 4.45 0.00 0.00 3.18
363 364 7.067615 TGTCATTAAGGCTTTGTAAGTGAACAA 59.932 33.333 4.45 0.00 37.58 2.83
364 365 7.918562 GTCATTAAGGCTTTGTAAGTGAACAAA 59.081 33.333 4.45 2.54 44.81 2.83
372 373 6.884096 TTTGTAAGTGAACAAAGCAACATG 57.116 33.333 0.00 0.00 42.78 3.21
373 374 4.930963 TGTAAGTGAACAAAGCAACATGG 58.069 39.130 0.00 0.00 0.00 3.66
374 375 3.457610 AAGTGAACAAAGCAACATGGG 57.542 42.857 0.00 0.00 0.00 4.00
375 376 1.688197 AGTGAACAAAGCAACATGGGG 59.312 47.619 0.00 0.00 0.00 4.96
376 377 1.686052 GTGAACAAAGCAACATGGGGA 59.314 47.619 0.00 0.00 0.00 4.81
377 378 2.299867 GTGAACAAAGCAACATGGGGAT 59.700 45.455 0.00 0.00 0.00 3.85
378 379 2.299582 TGAACAAAGCAACATGGGGATG 59.700 45.455 0.00 0.00 0.00 3.51
379 380 2.014010 ACAAAGCAACATGGGGATGT 57.986 45.000 0.00 0.00 36.10 3.06
380 381 3.168035 ACAAAGCAACATGGGGATGTA 57.832 42.857 0.00 0.00 33.81 2.29
381 382 3.091545 ACAAAGCAACATGGGGATGTAG 58.908 45.455 0.00 0.00 33.81 2.74
382 383 1.767759 AAGCAACATGGGGATGTAGC 58.232 50.000 0.00 0.00 33.81 3.58
383 384 0.921896 AGCAACATGGGGATGTAGCT 59.078 50.000 0.00 0.00 33.81 3.32
384 385 1.133976 AGCAACATGGGGATGTAGCTC 60.134 52.381 0.00 0.00 33.81 4.09
385 386 1.972872 CAACATGGGGATGTAGCTCC 58.027 55.000 0.00 0.00 33.81 4.70
386 387 0.469917 AACATGGGGATGTAGCTCCG 59.530 55.000 0.00 0.00 36.05 4.63
387 388 0.398522 ACATGGGGATGTAGCTCCGA 60.399 55.000 0.00 0.00 36.05 4.55
388 389 0.979665 CATGGGGATGTAGCTCCGAT 59.020 55.000 0.00 0.00 36.05 4.18
389 390 0.979665 ATGGGGATGTAGCTCCGATG 59.020 55.000 0.00 0.00 36.05 3.84
390 391 1.121407 TGGGGATGTAGCTCCGATGG 61.121 60.000 0.00 0.00 36.05 3.51
391 392 1.122019 GGGGATGTAGCTCCGATGGT 61.122 60.000 0.00 0.00 36.05 3.55
392 393 1.629043 GGGATGTAGCTCCGATGGTA 58.371 55.000 0.00 0.00 36.05 3.25
393 394 1.546476 GGGATGTAGCTCCGATGGTAG 59.454 57.143 0.00 0.00 36.05 3.18
394 395 2.515854 GGATGTAGCTCCGATGGTAGA 58.484 52.381 0.00 0.00 0.00 2.59
395 396 2.490115 GGATGTAGCTCCGATGGTAGAG 59.510 54.545 0.00 0.00 0.00 2.43
398 399 2.355244 GCTCCGATGGTAGAGCGC 60.355 66.667 0.00 0.00 45.44 5.92
399 400 2.851071 GCTCCGATGGTAGAGCGCT 61.851 63.158 11.27 11.27 45.44 5.92
400 401 1.736586 CTCCGATGGTAGAGCGCTT 59.263 57.895 13.26 4.13 29.87 4.68
401 402 0.596083 CTCCGATGGTAGAGCGCTTG 60.596 60.000 13.26 0.00 29.87 4.01
402 403 2.240500 CCGATGGTAGAGCGCTTGC 61.241 63.158 13.26 5.20 39.58 4.01
417 418 1.307097 CTTGCTTAGCATGGGAGAGC 58.693 55.000 8.05 0.00 38.76 4.09
418 419 0.914644 TTGCTTAGCATGGGAGAGCT 59.085 50.000 8.05 0.00 44.55 4.09
419 420 1.793414 TGCTTAGCATGGGAGAGCTA 58.207 50.000 1.39 0.00 42.05 3.32
420 421 2.333069 TGCTTAGCATGGGAGAGCTAT 58.667 47.619 1.39 0.00 42.39 2.97
421 422 2.038164 TGCTTAGCATGGGAGAGCTATG 59.962 50.000 1.39 0.00 42.39 2.23
422 423 2.614987 GCTTAGCATGGGAGAGCTATGG 60.615 54.545 0.00 0.00 42.39 2.74
423 424 1.649321 TAGCATGGGAGAGCTATGGG 58.351 55.000 0.00 0.00 42.05 4.00
424 425 1.132554 AGCATGGGAGAGCTATGGGG 61.133 60.000 0.00 0.00 39.78 4.96
425 426 1.130054 GCATGGGAGAGCTATGGGGA 61.130 60.000 0.00 0.00 0.00 4.81
426 427 1.666365 CATGGGAGAGCTATGGGGAT 58.334 55.000 0.00 0.00 0.00 3.85
427 428 1.558756 CATGGGAGAGCTATGGGGATC 59.441 57.143 0.00 0.00 0.00 3.36
428 429 0.542938 TGGGAGAGCTATGGGGATCG 60.543 60.000 0.00 0.00 0.00 3.69
429 430 0.251832 GGGAGAGCTATGGGGATCGA 60.252 60.000 0.00 0.00 0.00 3.59
430 431 1.621072 GGGAGAGCTATGGGGATCGAT 60.621 57.143 0.00 0.00 0.00 3.59
431 432 2.358300 GGGAGAGCTATGGGGATCGATA 60.358 54.545 0.00 0.00 0.00 2.92
432 433 2.691011 GGAGAGCTATGGGGATCGATAC 59.309 54.545 0.00 0.00 0.00 2.24
433 434 2.691011 GAGAGCTATGGGGATCGATACC 59.309 54.545 19.30 19.30 0.00 2.73
441 442 2.312424 GGGATCGATACCCCTCTTCT 57.688 55.000 16.63 0.00 41.38 2.85
442 443 2.172679 GGGATCGATACCCCTCTTCTC 58.827 57.143 16.63 0.00 41.38 2.87
443 444 2.172679 GGATCGATACCCCTCTTCTCC 58.827 57.143 0.00 0.00 0.00 3.71
444 445 2.491086 GGATCGATACCCCTCTTCTCCA 60.491 54.545 0.00 0.00 0.00 3.86
445 446 2.840640 TCGATACCCCTCTTCTCCAA 57.159 50.000 0.00 0.00 0.00 3.53
446 447 3.330126 TCGATACCCCTCTTCTCCAAT 57.670 47.619 0.00 0.00 0.00 3.16
447 448 3.654273 TCGATACCCCTCTTCTCCAATT 58.346 45.455 0.00 0.00 0.00 2.32
448 449 4.037927 TCGATACCCCTCTTCTCCAATTT 58.962 43.478 0.00 0.00 0.00 1.82
449 450 4.473559 TCGATACCCCTCTTCTCCAATTTT 59.526 41.667 0.00 0.00 0.00 1.82
450 451 5.045140 TCGATACCCCTCTTCTCCAATTTTT 60.045 40.000 0.00 0.00 0.00 1.94
471 472 7.736447 TTTTTGTTTTTCCTTTCTTTGCAGA 57.264 28.000 0.00 0.00 0.00 4.26
472 473 7.920160 TTTTGTTTTTCCTTTCTTTGCAGAT 57.080 28.000 0.00 0.00 0.00 2.90
473 474 7.538303 TTTGTTTTTCCTTTCTTTGCAGATC 57.462 32.000 0.00 0.00 0.00 2.75
474 475 5.600696 TGTTTTTCCTTTCTTTGCAGATCC 58.399 37.500 0.00 0.00 0.00 3.36
475 476 5.128499 TGTTTTTCCTTTCTTTGCAGATCCA 59.872 36.000 0.00 0.00 0.00 3.41
476 477 5.867903 TTTTCCTTTCTTTGCAGATCCAA 57.132 34.783 0.00 0.00 0.00 3.53
477 478 5.867903 TTTCCTTTCTTTGCAGATCCAAA 57.132 34.783 0.00 0.00 33.93 3.28
478 479 4.853924 TCCTTTCTTTGCAGATCCAAAC 57.146 40.909 0.00 0.00 31.85 2.93
479 480 4.214310 TCCTTTCTTTGCAGATCCAAACA 58.786 39.130 0.00 0.00 31.85 2.83
480 481 4.648762 TCCTTTCTTTGCAGATCCAAACAA 59.351 37.500 0.00 0.00 31.85 2.83
481 482 5.128499 TCCTTTCTTTGCAGATCCAAACAAA 59.872 36.000 0.00 0.00 31.85 2.83
482 483 5.816777 CCTTTCTTTGCAGATCCAAACAAAA 59.183 36.000 0.00 0.00 32.09 2.44
483 484 6.484308 CCTTTCTTTGCAGATCCAAACAAAAT 59.516 34.615 0.00 0.00 32.09 1.82
484 485 7.656948 CCTTTCTTTGCAGATCCAAACAAAATA 59.343 33.333 0.00 0.00 32.09 1.40
485 486 7.945033 TTCTTTGCAGATCCAAACAAAATAC 57.055 32.000 0.00 0.00 32.09 1.89
486 487 7.048629 TCTTTGCAGATCCAAACAAAATACA 57.951 32.000 0.00 0.00 32.09 2.29
487 488 7.147312 TCTTTGCAGATCCAAACAAAATACAG 58.853 34.615 0.00 0.00 32.09 2.74
488 489 4.808558 TGCAGATCCAAACAAAATACAGC 58.191 39.130 0.00 0.00 0.00 4.40
489 490 4.176271 GCAGATCCAAACAAAATACAGCC 58.824 43.478 0.00 0.00 0.00 4.85
490 491 4.414852 CAGATCCAAACAAAATACAGCCG 58.585 43.478 0.00 0.00 0.00 5.52
491 492 3.443681 AGATCCAAACAAAATACAGCCGG 59.556 43.478 0.00 0.00 0.00 6.13
492 493 2.588620 TCCAAACAAAATACAGCCGGT 58.411 42.857 1.90 0.00 0.00 5.28
493 494 2.959707 TCCAAACAAAATACAGCCGGTT 59.040 40.909 1.90 0.00 0.00 4.44
494 495 3.385111 TCCAAACAAAATACAGCCGGTTT 59.615 39.130 1.90 0.00 0.00 3.27
495 496 3.492756 CCAAACAAAATACAGCCGGTTTG 59.507 43.478 1.90 7.39 42.68 2.93
496 497 4.116238 CAAACAAAATACAGCCGGTTTGT 58.884 39.130 16.23 16.23 44.01 2.83
497 498 4.394439 AACAAAATACAGCCGGTTTGTT 57.606 36.364 19.85 19.85 44.94 2.83
498 499 4.394439 ACAAAATACAGCCGGTTTGTTT 57.606 36.364 17.00 8.34 40.37 2.83
499 500 4.760878 ACAAAATACAGCCGGTTTGTTTT 58.239 34.783 17.00 13.08 40.37 2.43
500 501 4.568760 ACAAAATACAGCCGGTTTGTTTTG 59.431 37.500 22.76 22.76 40.37 2.44
501 502 4.394439 AAATACAGCCGGTTTGTTTTGT 57.606 36.364 17.00 0.84 0.00 2.83
502 503 2.853731 TACAGCCGGTTTGTTTTGTG 57.146 45.000 17.00 0.00 0.00 3.33
503 504 0.459411 ACAGCCGGTTTGTTTTGTGC 60.459 50.000 1.90 0.00 0.00 4.57
504 505 0.179113 CAGCCGGTTTGTTTTGTGCT 60.179 50.000 1.90 0.00 0.00 4.40
505 506 0.179113 AGCCGGTTTGTTTTGTGCTG 60.179 50.000 1.90 0.00 0.00 4.41
506 507 0.179124 GCCGGTTTGTTTTGTGCTGA 60.179 50.000 1.90 0.00 0.00 4.26
507 508 1.838913 CCGGTTTGTTTTGTGCTGAG 58.161 50.000 0.00 0.00 0.00 3.35
508 509 1.403679 CCGGTTTGTTTTGTGCTGAGA 59.596 47.619 0.00 0.00 0.00 3.27
509 510 2.541588 CCGGTTTGTTTTGTGCTGAGAG 60.542 50.000 0.00 0.00 0.00 3.20
510 511 2.354510 CGGTTTGTTTTGTGCTGAGAGA 59.645 45.455 0.00 0.00 0.00 3.10
511 512 3.546815 CGGTTTGTTTTGTGCTGAGAGAG 60.547 47.826 0.00 0.00 0.00 3.20
523 524 4.210331 TGCTGAGAGAGAGCATATACACA 58.790 43.478 0.00 0.00 41.56 3.72
547 548 1.530720 TGTGCTGCGAACATACACAAG 59.469 47.619 0.00 0.00 38.86 3.16
548 549 0.516877 TGCTGCGAACATACACAAGC 59.483 50.000 0.00 0.00 0.00 4.01
549 550 0.516877 GCTGCGAACATACACAAGCA 59.483 50.000 0.00 0.00 0.00 3.91
550 551 2.515641 CTGCGAACATACACAAGCAG 57.484 50.000 0.80 0.80 44.51 4.24
551 552 1.800586 CTGCGAACATACACAAGCAGT 59.199 47.619 7.04 0.00 44.75 4.40
565 566 4.438797 CACAAGCAGTGCAATAATAATCGC 59.561 41.667 19.20 0.00 42.15 4.58
566 567 4.096231 ACAAGCAGTGCAATAATAATCGCA 59.904 37.500 19.20 0.00 0.00 5.10
568 569 3.251729 AGCAGTGCAATAATAATCGCAGG 59.748 43.478 19.20 0.00 34.49 4.85
573 584 3.631686 TGCAATAATAATCGCAGGCTGTT 59.368 39.130 17.16 5.19 0.00 3.16
580 591 1.668419 ATCGCAGGCTGTTACCATTC 58.332 50.000 17.16 0.00 0.00 2.67
591 602 6.014327 AGGCTGTTACCATTCATGATTTTGTT 60.014 34.615 0.00 0.00 0.00 2.83
592 603 6.091169 GGCTGTTACCATTCATGATTTTGTTG 59.909 38.462 0.00 0.00 0.00 3.33
615 626 9.346725 GTTGGAATATTCTTTGTAGAAAAGCAG 57.653 33.333 14.95 0.00 43.32 4.24
621 632 4.982277 TTCTTTGTAGAAAAGCAGACGGCT 60.982 41.667 0.00 0.00 44.66 5.52
622 633 6.984893 TTCTTTGTAGAAAAGCAGACGGCTG 61.985 44.000 15.93 15.93 43.73 4.85
680 691 2.125961 ATGCGAGAGGTACGGGGAC 61.126 63.158 0.00 0.00 0.00 4.46
703 714 1.595311 TACCCCACATCTCCAGCAAT 58.405 50.000 0.00 0.00 0.00 3.56
739 750 8.624776 ACTAACTCAACTTTCAGATTTTTCAGG 58.375 33.333 0.00 0.00 0.00 3.86
795 818 1.153823 CAGCCGGTCTGTACTTCCG 60.154 63.158 15.27 13.86 43.30 4.30
819 842 1.805428 AACGCATTTTCCTTGCCGCT 61.805 50.000 0.00 0.00 36.75 5.52
875 898 4.954970 CAGGCAGGTGCGGGTTGT 62.955 66.667 0.00 0.00 43.26 3.32
898 921 3.823873 TCTGAATTTGCCGCTCCTTTTTA 59.176 39.130 0.00 0.00 0.00 1.52
903 926 4.492791 TTTGCCGCTCCTTTTTACTTAC 57.507 40.909 0.00 0.00 0.00 2.34
908 931 5.883673 TGCCGCTCCTTTTTACTTACATTAT 59.116 36.000 0.00 0.00 0.00 1.28
909 932 7.049133 TGCCGCTCCTTTTTACTTACATTATA 58.951 34.615 0.00 0.00 0.00 0.98
910 933 7.011669 TGCCGCTCCTTTTTACTTACATTATAC 59.988 37.037 0.00 0.00 0.00 1.47
911 934 7.011669 GCCGCTCCTTTTTACTTACATTATACA 59.988 37.037 0.00 0.00 0.00 2.29
912 935 8.548721 CCGCTCCTTTTTACTTACATTATACAG 58.451 37.037 0.00 0.00 0.00 2.74
931 999 5.344743 ACAGTACCAATGAACGATCATCT 57.655 39.130 8.76 0.00 45.60 2.90
932 1000 5.111989 ACAGTACCAATGAACGATCATCTG 58.888 41.667 8.76 12.82 45.60 2.90
947 1015 2.037251 TCATCTGGCTCCCGTTATAAGC 59.963 50.000 0.00 0.00 35.27 3.09
955 1023 0.878961 CCCGTTATAAGCCACTCGCC 60.879 60.000 0.00 0.00 38.78 5.54
961 1029 2.343475 ATAAGCCACTCGCCATGGGG 62.343 60.000 22.46 22.46 37.73 4.96
963 1031 3.792736 GCCACTCGCCATGGGGTA 61.793 66.667 26.48 13.45 37.73 3.69
964 1032 2.994699 CCACTCGCCATGGGGTAA 59.005 61.111 26.48 9.23 36.17 2.85
965 1033 1.531748 CCACTCGCCATGGGGTAAT 59.468 57.895 26.48 11.78 36.17 1.89
966 1034 0.535102 CCACTCGCCATGGGGTAATC 60.535 60.000 26.48 1.59 36.17 1.75
967 1035 0.535102 CACTCGCCATGGGGTAATCC 60.535 60.000 26.48 0.83 36.17 3.01
969 1037 0.535102 CTCGCCATGGGGTAATCCAC 60.535 60.000 26.48 0.00 39.97 4.02
1095 1175 4.073293 CTGCAACCCAGGTAAGGTATAG 57.927 50.000 0.00 0.00 36.27 1.31
1096 1176 3.454812 CTGCAACCCAGGTAAGGTATAGT 59.545 47.826 0.00 0.00 36.27 2.12
1097 1177 3.199071 TGCAACCCAGGTAAGGTATAGTG 59.801 47.826 0.00 0.00 36.27 2.74
1098 1178 3.805207 CAACCCAGGTAAGGTATAGTGC 58.195 50.000 0.00 0.00 36.27 4.40
1099 1179 3.124856 ACCCAGGTAAGGTATAGTGCA 57.875 47.619 0.00 0.00 35.24 4.57
1100 1180 2.770232 ACCCAGGTAAGGTATAGTGCAC 59.230 50.000 9.40 9.40 35.24 4.57
1101 1181 3.039011 CCCAGGTAAGGTATAGTGCACT 58.961 50.000 25.12 25.12 0.00 4.40
1135 1215 3.909662 AGCAATGCTAACGCTGGG 58.090 55.556 5.69 0.00 36.99 4.45
1136 1216 2.102946 GCAATGCTAACGCTGGGC 59.897 61.111 0.00 0.00 36.97 5.36
1137 1217 2.409870 GCAATGCTAACGCTGGGCT 61.410 57.895 0.00 0.00 36.97 5.19
1138 1218 1.095228 GCAATGCTAACGCTGGGCTA 61.095 55.000 0.00 0.00 36.97 3.93
1139 1219 1.378531 CAATGCTAACGCTGGGCTAA 58.621 50.000 0.00 0.00 36.97 3.09
1140 1220 1.064060 CAATGCTAACGCTGGGCTAAC 59.936 52.381 0.00 0.00 36.97 2.34
1141 1221 0.810031 ATGCTAACGCTGGGCTAACG 60.810 55.000 0.00 0.00 36.97 3.18
1142 1222 2.810012 GCTAACGCTGGGCTAACGC 61.810 63.158 0.00 0.00 0.00 4.84
1143 1223 1.153628 CTAACGCTGGGCTAACGCT 60.154 57.895 0.00 0.00 36.09 5.07
1269 1403 1.073923 CCAGGTACCAAGTCTGCCTTT 59.926 52.381 15.94 0.00 0.00 3.11
1271 1405 2.054799 AGGTACCAAGTCTGCCTTTGA 58.945 47.619 15.94 0.00 0.00 2.69
1279 1413 4.082895 CCAAGTCTGCCTTTGATTCTTGAG 60.083 45.833 0.00 0.00 34.62 3.02
1288 1422 0.320374 TGATTCTTGAGCCGACGGTT 59.680 50.000 16.73 9.96 0.00 4.44
1289 1423 0.721718 GATTCTTGAGCCGACGGTTG 59.278 55.000 16.73 0.00 0.00 3.77
1291 1425 2.030562 CTTGAGCCGACGGTTGGT 59.969 61.111 16.73 3.01 0.00 3.67
1293 1427 3.818121 TTGAGCCGACGGTTGGTGG 62.818 63.158 16.73 1.21 0.00 4.61
1294 1428 4.309950 GAGCCGACGGTTGGTGGT 62.310 66.667 16.73 1.34 0.00 4.16
1298 1432 4.244463 CGACGGTTGGTGGTGGGT 62.244 66.667 0.00 0.00 0.00 4.51
1299 1433 2.281276 GACGGTTGGTGGTGGGTC 60.281 66.667 0.00 0.00 0.00 4.46
1300 1434 2.770904 ACGGTTGGTGGTGGGTCT 60.771 61.111 0.00 0.00 0.00 3.85
1301 1435 2.333701 GACGGTTGGTGGTGGGTCTT 62.334 60.000 0.00 0.00 0.00 3.01
1302 1436 1.055551 ACGGTTGGTGGTGGGTCTTA 61.056 55.000 0.00 0.00 0.00 2.10
1303 1437 0.321298 CGGTTGGTGGTGGGTCTTAG 60.321 60.000 0.00 0.00 0.00 2.18
1586 1732 1.304381 GCTTTGGAGCCACCCATGA 60.304 57.895 0.00 0.00 43.29 3.07
1626 1772 4.830765 TGACTACCGCGGCCATGC 62.831 66.667 28.58 11.99 0.00 4.06
1672 1824 0.859232 TCAACTTGCTCGCGTTTCTC 59.141 50.000 5.77 0.00 0.00 2.87
1712 1864 0.877649 CATTCAGGGTCGCTGATCGG 60.878 60.000 19.26 8.98 39.05 4.18
1716 1868 2.027751 GGGTCGCTGATCGGTAGC 59.972 66.667 2.89 0.00 39.05 3.58
1731 2169 1.639280 GTAGCTCACTTCTCAGCAGC 58.361 55.000 0.00 0.00 38.18 5.25
1865 2316 4.566545 TCAGGCAAACAAATGTGTACAG 57.433 40.909 0.00 0.00 36.80 2.74
1868 2319 5.048782 TCAGGCAAACAAATGTGTACAGATC 60.049 40.000 5.89 0.00 36.80 2.75
1914 2365 3.195825 GGCTAACTGCTACTCTCCTTTCA 59.804 47.826 0.00 0.00 42.39 2.69
1980 4032 6.916360 TCAAGGGAAAAAGAATGCATAACT 57.084 33.333 0.00 0.00 0.00 2.24
1982 4034 6.721208 TCAAGGGAAAAAGAATGCATAACTCT 59.279 34.615 0.00 0.00 0.00 3.24
2076 4163 7.961325 TGCTGGAAGAAATTAAAAATGAACC 57.039 32.000 0.00 0.00 34.07 3.62
2092 4179 3.909732 TGAACCCCTCATGTCAACTTTT 58.090 40.909 0.00 0.00 0.00 2.27
2147 4234 7.757097 TCTTAGATGAATAAGTTGCGACTTC 57.243 36.000 22.76 9.83 44.75 3.01
2208 4296 0.036010 AAACTGGGACGCATCAGAGG 60.036 55.000 6.51 0.00 35.20 3.69
2244 4335 6.533723 TCACAAGCTTTGTATAGATAACACGG 59.466 38.462 0.00 0.00 43.23 4.94
2253 4344 7.458409 TGTATAGATAACACGGTTATCCCTC 57.542 40.000 22.47 15.25 33.11 4.30
2279 4370 2.741598 GCTCTCAGCAAGCGCAGT 60.742 61.111 11.47 0.00 41.89 4.40
2307 4398 1.072505 GTCCTGCCGAGGGAAAACA 59.927 57.895 0.00 0.00 40.25 2.83
2318 4409 3.303990 CGAGGGAAAACATGTCACTGTTG 60.304 47.826 0.00 0.00 39.25 3.33
2521 4617 2.447047 AGAACTTCCCCAGGTTGTGAAT 59.553 45.455 0.00 0.00 0.00 2.57
2618 4714 5.128499 AGAGTGCAAGTAATAGCAGAGTCAT 59.872 40.000 0.00 0.00 42.14 3.06
2634 4730 7.141363 GCAGAGTCATTGCTTAAAGAAAAAGA 58.859 34.615 0.00 0.00 38.51 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 0.042731 TGGTTGACTAGAGGAGGGGG 59.957 60.000 0.00 0.00 0.00 5.40
13 14 2.182516 ATGGTTGACTAGAGGAGGGG 57.817 55.000 0.00 0.00 0.00 4.79
14 15 3.508012 CGATATGGTTGACTAGAGGAGGG 59.492 52.174 0.00 0.00 0.00 4.30
15 16 4.399219 TCGATATGGTTGACTAGAGGAGG 58.601 47.826 0.00 0.00 0.00 4.30
16 17 5.124776 GGATCGATATGGTTGACTAGAGGAG 59.875 48.000 0.00 0.00 0.00 3.69
17 18 5.010933 GGATCGATATGGTTGACTAGAGGA 58.989 45.833 0.00 0.00 0.00 3.71
18 19 5.013547 AGGATCGATATGGTTGACTAGAGG 58.986 45.833 0.00 0.00 0.00 3.69
19 20 6.582677 AAGGATCGATATGGTTGACTAGAG 57.417 41.667 0.00 0.00 0.00 2.43
20 21 6.549736 TGAAAGGATCGATATGGTTGACTAGA 59.450 38.462 0.00 0.00 0.00 2.43
21 22 6.749139 TGAAAGGATCGATATGGTTGACTAG 58.251 40.000 0.00 0.00 0.00 2.57
22 23 6.724893 TGAAAGGATCGATATGGTTGACTA 57.275 37.500 0.00 0.00 0.00 2.59
23 24 5.614324 TGAAAGGATCGATATGGTTGACT 57.386 39.130 0.00 0.00 0.00 3.41
24 25 5.817816 AGTTGAAAGGATCGATATGGTTGAC 59.182 40.000 0.00 0.00 0.00 3.18
25 26 5.989477 AGTTGAAAGGATCGATATGGTTGA 58.011 37.500 0.00 0.00 0.00 3.18
26 27 6.316140 TCAAGTTGAAAGGATCGATATGGTTG 59.684 38.462 2.20 0.00 0.00 3.77
27 28 6.414732 TCAAGTTGAAAGGATCGATATGGTT 58.585 36.000 2.20 0.00 0.00 3.67
28 29 5.989477 TCAAGTTGAAAGGATCGATATGGT 58.011 37.500 2.20 0.00 0.00 3.55
29 30 7.227314 TGAATCAAGTTGAAAGGATCGATATGG 59.773 37.037 10.14 0.00 0.00 2.74
30 31 8.146479 TGAATCAAGTTGAAAGGATCGATATG 57.854 34.615 10.14 0.00 0.00 1.78
31 32 8.737168 TTGAATCAAGTTGAAAGGATCGATAT 57.263 30.769 10.14 0.00 0.00 1.63
32 33 8.560355 TTTGAATCAAGTTGAAAGGATCGATA 57.440 30.769 10.14 0.00 0.00 2.92
33 34 7.452880 TTTGAATCAAGTTGAAAGGATCGAT 57.547 32.000 10.14 0.00 0.00 3.59
34 35 6.875948 TTTGAATCAAGTTGAAAGGATCGA 57.124 33.333 10.14 0.00 0.00 3.59
35 36 7.324616 GTCTTTTGAATCAAGTTGAAAGGATCG 59.675 37.037 10.14 0.00 33.18 3.69
36 37 8.355913 AGTCTTTTGAATCAAGTTGAAAGGATC 58.644 33.333 10.14 4.65 33.18 3.36
37 38 8.242729 AGTCTTTTGAATCAAGTTGAAAGGAT 57.757 30.769 10.14 0.00 33.18 3.24
38 39 7.645058 AGTCTTTTGAATCAAGTTGAAAGGA 57.355 32.000 10.14 2.84 29.22 3.36
39 40 8.707938 AAAGTCTTTTGAATCAAGTTGAAAGG 57.292 30.769 10.14 0.34 0.00 3.11
43 44 9.567848 GTTGTAAAGTCTTTTGAATCAAGTTGA 57.432 29.630 8.27 8.27 0.00 3.18
44 45 9.352784 TGTTGTAAAGTCTTTTGAATCAAGTTG 57.647 29.630 2.51 0.00 0.00 3.16
45 46 9.921637 TTGTTGTAAAGTCTTTTGAATCAAGTT 57.078 25.926 2.51 0.00 0.00 2.66
46 47 9.573133 CTTGTTGTAAAGTCTTTTGAATCAAGT 57.427 29.630 2.51 0.00 0.00 3.16
47 48 9.787532 TCTTGTTGTAAAGTCTTTTGAATCAAG 57.212 29.630 2.51 11.55 0.00 3.02
52 53 8.868916 GCAATTCTTGTTGTAAAGTCTTTTGAA 58.131 29.630 2.51 0.00 0.00 2.69
53 54 8.250332 AGCAATTCTTGTTGTAAAGTCTTTTGA 58.750 29.630 2.51 0.00 0.00 2.69
54 55 8.411318 AGCAATTCTTGTTGTAAAGTCTTTTG 57.589 30.769 2.51 0.00 0.00 2.44
55 56 8.250332 TGAGCAATTCTTGTTGTAAAGTCTTTT 58.750 29.630 2.51 0.00 0.00 2.27
56 57 7.771183 TGAGCAATTCTTGTTGTAAAGTCTTT 58.229 30.769 2.81 2.81 0.00 2.52
57 58 7.333528 TGAGCAATTCTTGTTGTAAAGTCTT 57.666 32.000 0.00 0.00 0.00 3.01
58 59 6.942532 TGAGCAATTCTTGTTGTAAAGTCT 57.057 33.333 0.00 0.00 0.00 3.24
59 60 7.702348 AGTTTGAGCAATTCTTGTTGTAAAGTC 59.298 33.333 0.00 0.00 0.00 3.01
60 61 7.547227 AGTTTGAGCAATTCTTGTTGTAAAGT 58.453 30.769 0.00 0.00 0.00 2.66
61 62 7.917505 AGAGTTTGAGCAATTCTTGTTGTAAAG 59.082 33.333 0.00 0.00 0.00 1.85
62 63 7.771183 AGAGTTTGAGCAATTCTTGTTGTAAA 58.229 30.769 0.00 0.00 0.00 2.01
63 64 7.333528 AGAGTTTGAGCAATTCTTGTTGTAA 57.666 32.000 0.00 0.00 0.00 2.41
64 65 6.942532 AGAGTTTGAGCAATTCTTGTTGTA 57.057 33.333 0.00 0.00 0.00 2.41
65 66 5.841957 AGAGTTTGAGCAATTCTTGTTGT 57.158 34.783 0.00 0.00 0.00 3.32
66 67 8.633075 TTTTAGAGTTTGAGCAATTCTTGTTG 57.367 30.769 0.00 0.00 0.00 3.33
124 125 9.543231 TCCTGTTTCTCTAAAAATACTCCTCTA 57.457 33.333 0.00 0.00 0.00 2.43
125 126 8.437274 TCCTGTTTCTCTAAAAATACTCCTCT 57.563 34.615 0.00 0.00 0.00 3.69
139 140 8.997734 AGGATTACATTTCTATCCTGTTTCTCT 58.002 33.333 0.00 0.00 44.93 3.10
140 141 9.267084 GAGGATTACATTTCTATCCTGTTTCTC 57.733 37.037 7.55 0.00 46.24 2.87
141 142 8.772250 TGAGGATTACATTTCTATCCTGTTTCT 58.228 33.333 7.55 0.00 46.24 2.52
142 143 8.964476 TGAGGATTACATTTCTATCCTGTTTC 57.036 34.615 7.55 0.00 46.24 2.78
154 155 8.840321 CGGAAAACAGATATGAGGATTACATTT 58.160 33.333 0.00 0.00 0.00 2.32
155 156 7.445402 CCGGAAAACAGATATGAGGATTACATT 59.555 37.037 0.00 0.00 0.00 2.71
156 157 6.936900 CCGGAAAACAGATATGAGGATTACAT 59.063 38.462 0.00 0.00 0.00 2.29
157 158 6.288294 CCGGAAAACAGATATGAGGATTACA 58.712 40.000 0.00 0.00 0.00 2.41
158 159 5.179555 GCCGGAAAACAGATATGAGGATTAC 59.820 44.000 5.05 0.00 0.00 1.89
159 160 5.305585 GCCGGAAAACAGATATGAGGATTA 58.694 41.667 5.05 0.00 0.00 1.75
160 161 4.137543 GCCGGAAAACAGATATGAGGATT 58.862 43.478 5.05 0.00 0.00 3.01
161 162 3.496870 GGCCGGAAAACAGATATGAGGAT 60.497 47.826 5.05 0.00 0.00 3.24
162 163 2.158813 GGCCGGAAAACAGATATGAGGA 60.159 50.000 5.05 0.00 0.00 3.71
163 164 2.222027 GGCCGGAAAACAGATATGAGG 58.778 52.381 5.05 0.00 0.00 3.86
164 165 2.222027 GGGCCGGAAAACAGATATGAG 58.778 52.381 5.05 0.00 0.00 2.90
165 166 1.562008 TGGGCCGGAAAACAGATATGA 59.438 47.619 5.05 0.00 0.00 2.15
166 167 2.051334 TGGGCCGGAAAACAGATATG 57.949 50.000 5.05 0.00 0.00 1.78
167 168 2.443255 AGATGGGCCGGAAAACAGATAT 59.557 45.455 5.05 0.00 0.00 1.63
168 169 1.843851 AGATGGGCCGGAAAACAGATA 59.156 47.619 5.05 0.00 0.00 1.98
169 170 0.625849 AGATGGGCCGGAAAACAGAT 59.374 50.000 5.05 0.00 0.00 2.90
170 171 0.404040 AAGATGGGCCGGAAAACAGA 59.596 50.000 5.05 0.00 0.00 3.41
171 172 1.202348 GAAAGATGGGCCGGAAAACAG 59.798 52.381 5.05 0.00 0.00 3.16
172 173 1.253100 GAAAGATGGGCCGGAAAACA 58.747 50.000 5.05 0.00 0.00 2.83
173 174 0.530744 GGAAAGATGGGCCGGAAAAC 59.469 55.000 5.05 0.00 0.00 2.43
174 175 0.113385 TGGAAAGATGGGCCGGAAAA 59.887 50.000 5.05 0.00 0.00 2.29
175 176 0.610785 GTGGAAAGATGGGCCGGAAA 60.611 55.000 5.05 0.00 0.00 3.13
176 177 1.001393 GTGGAAAGATGGGCCGGAA 60.001 57.895 5.05 0.00 0.00 4.30
177 178 2.674754 GTGGAAAGATGGGCCGGA 59.325 61.111 5.05 0.00 0.00 5.14
178 179 2.440247 GGTGGAAAGATGGGCCGG 60.440 66.667 0.00 0.00 0.00 6.13
179 180 1.452108 GAGGTGGAAAGATGGGCCG 60.452 63.158 0.00 0.00 0.00 6.13
180 181 0.394899 CTGAGGTGGAAAGATGGGCC 60.395 60.000 0.00 0.00 0.00 5.80
181 182 1.034292 GCTGAGGTGGAAAGATGGGC 61.034 60.000 0.00 0.00 0.00 5.36
182 183 0.329261 TGCTGAGGTGGAAAGATGGG 59.671 55.000 0.00 0.00 0.00 4.00
183 184 2.431954 ATGCTGAGGTGGAAAGATGG 57.568 50.000 0.00 0.00 0.00 3.51
184 185 5.393461 GGTTTAATGCTGAGGTGGAAAGATG 60.393 44.000 0.00 0.00 0.00 2.90
185 186 4.706962 GGTTTAATGCTGAGGTGGAAAGAT 59.293 41.667 0.00 0.00 0.00 2.40
186 187 4.079253 GGTTTAATGCTGAGGTGGAAAGA 58.921 43.478 0.00 0.00 0.00 2.52
187 188 3.193479 GGGTTTAATGCTGAGGTGGAAAG 59.807 47.826 0.00 0.00 0.00 2.62
188 189 3.161866 GGGTTTAATGCTGAGGTGGAAA 58.838 45.455 0.00 0.00 0.00 3.13
189 190 2.109128 TGGGTTTAATGCTGAGGTGGAA 59.891 45.455 0.00 0.00 0.00 3.53
190 191 1.707989 TGGGTTTAATGCTGAGGTGGA 59.292 47.619 0.00 0.00 0.00 4.02
191 192 2.214376 TGGGTTTAATGCTGAGGTGG 57.786 50.000 0.00 0.00 0.00 4.61
192 193 4.039124 AGTTTTGGGTTTAATGCTGAGGTG 59.961 41.667 0.00 0.00 0.00 4.00
193 194 4.223144 AGTTTTGGGTTTAATGCTGAGGT 58.777 39.130 0.00 0.00 0.00 3.85
194 195 4.615912 CGAGTTTTGGGTTTAATGCTGAGG 60.616 45.833 0.00 0.00 0.00 3.86
195 196 4.023193 ACGAGTTTTGGGTTTAATGCTGAG 60.023 41.667 0.00 0.00 0.00 3.35
196 197 3.886505 ACGAGTTTTGGGTTTAATGCTGA 59.113 39.130 0.00 0.00 0.00 4.26
197 198 4.237349 ACGAGTTTTGGGTTTAATGCTG 57.763 40.909 0.00 0.00 0.00 4.41
198 199 4.261867 GGAACGAGTTTTGGGTTTAATGCT 60.262 41.667 0.00 0.00 0.00 3.79
199 200 3.985279 GGAACGAGTTTTGGGTTTAATGC 59.015 43.478 0.00 0.00 0.00 3.56
200 201 4.038162 TGGGAACGAGTTTTGGGTTTAATG 59.962 41.667 0.00 0.00 0.00 1.90
201 202 4.216708 TGGGAACGAGTTTTGGGTTTAAT 58.783 39.130 0.00 0.00 0.00 1.40
202 203 3.629087 TGGGAACGAGTTTTGGGTTTAA 58.371 40.909 0.00 0.00 0.00 1.52
203 204 3.294038 TGGGAACGAGTTTTGGGTTTA 57.706 42.857 0.00 0.00 0.00 2.01
204 205 2.146920 TGGGAACGAGTTTTGGGTTT 57.853 45.000 0.00 0.00 0.00 3.27
205 206 2.146920 TTGGGAACGAGTTTTGGGTT 57.853 45.000 0.00 0.00 0.00 4.11
206 207 2.146920 TTTGGGAACGAGTTTTGGGT 57.853 45.000 0.00 0.00 0.00 4.51
207 208 2.288763 CCATTTGGGAACGAGTTTTGGG 60.289 50.000 0.00 0.00 40.01 4.12
208 209 2.866065 GCCATTTGGGAACGAGTTTTGG 60.866 50.000 0.00 0.00 40.01 3.28
209 210 2.403259 GCCATTTGGGAACGAGTTTTG 58.597 47.619 0.00 0.00 40.01 2.44
210 211 1.343142 GGCCATTTGGGAACGAGTTTT 59.657 47.619 0.00 0.00 40.01 2.43
211 212 0.966179 GGCCATTTGGGAACGAGTTT 59.034 50.000 0.00 0.00 40.01 2.66
212 213 1.241315 CGGCCATTTGGGAACGAGTT 61.241 55.000 2.24 0.00 39.89 3.01
213 214 1.674322 CGGCCATTTGGGAACGAGT 60.674 57.895 2.24 0.00 39.89 4.18
214 215 2.406616 CCGGCCATTTGGGAACGAG 61.407 63.158 2.24 0.00 39.89 4.18
215 216 2.360600 CCGGCCATTTGGGAACGA 60.361 61.111 2.24 0.00 39.89 3.85
221 222 3.852307 CATGCCCCGGCCATTTGG 61.852 66.667 2.24 0.00 41.09 3.28
222 223 1.897225 TTTCATGCCCCGGCCATTTG 61.897 55.000 2.24 0.00 41.09 2.32
223 224 0.982326 ATTTCATGCCCCGGCCATTT 60.982 50.000 2.24 0.00 41.09 2.32
224 225 0.982326 AATTTCATGCCCCGGCCATT 60.982 50.000 2.24 0.00 41.09 3.16
225 226 1.382971 AATTTCATGCCCCGGCCAT 60.383 52.632 2.24 0.00 41.09 4.40
226 227 2.038651 AATTTCATGCCCCGGCCA 59.961 55.556 2.24 0.00 41.09 5.36
227 228 1.402107 ATGAATTTCATGCCCCGGCC 61.402 55.000 11.06 0.00 35.43 6.13
228 229 1.270550 CTATGAATTTCATGCCCCGGC 59.729 52.381 19.81 0.00 37.70 6.13
229 230 2.816087 CTCTATGAATTTCATGCCCCGG 59.184 50.000 19.81 0.00 37.70 5.73
230 231 2.227388 GCTCTATGAATTTCATGCCCCG 59.773 50.000 19.81 6.82 37.70 5.73
231 232 3.225104 TGCTCTATGAATTTCATGCCCC 58.775 45.455 19.81 8.09 37.70 5.80
232 233 5.464030 AATGCTCTATGAATTTCATGCCC 57.536 39.130 19.81 7.80 37.70 5.36
233 234 5.152097 CGAATGCTCTATGAATTTCATGCC 58.848 41.667 19.81 7.51 37.70 4.40
234 235 5.755813 ACGAATGCTCTATGAATTTCATGC 58.244 37.500 19.81 15.22 37.70 4.06
235 236 9.720667 TTAAACGAATGCTCTATGAATTTCATG 57.279 29.630 19.81 10.98 37.70 3.07
237 238 9.720667 CATTAAACGAATGCTCTATGAATTTCA 57.279 29.630 0.75 0.75 38.68 2.69
249 250 7.518600 AGCAAAGGCACATTAAACGAATGCT 62.519 40.000 0.00 0.00 42.54 3.79
250 251 5.380573 AGCAAAGGCACATTAAACGAATGC 61.381 41.667 0.00 0.00 42.54 3.56
251 252 4.236935 AGCAAAGGCACATTAAACGAATG 58.763 39.130 0.00 0.00 43.52 2.67
252 253 4.022416 TGAGCAAAGGCACATTAAACGAAT 60.022 37.500 0.00 0.00 44.61 3.34
253 254 3.316588 TGAGCAAAGGCACATTAAACGAA 59.683 39.130 0.00 0.00 44.61 3.85
254 255 2.881513 TGAGCAAAGGCACATTAAACGA 59.118 40.909 0.00 0.00 44.61 3.85
255 256 3.281341 TGAGCAAAGGCACATTAAACG 57.719 42.857 0.00 0.00 44.61 3.60
256 257 5.982465 TTTTGAGCAAAGGCACATTAAAC 57.018 34.783 0.00 0.00 44.61 2.01
279 280 9.673454 GATAATTGTCCACTAAACGTTCTTTTT 57.327 29.630 0.00 0.00 0.00 1.94
280 281 8.013378 CGATAATTGTCCACTAAACGTTCTTTT 58.987 33.333 0.00 0.00 0.00 2.27
281 282 7.172019 ACGATAATTGTCCACTAAACGTTCTTT 59.828 33.333 0.00 0.00 0.00 2.52
282 283 6.647895 ACGATAATTGTCCACTAAACGTTCTT 59.352 34.615 0.00 0.00 0.00 2.52
283 284 6.161381 ACGATAATTGTCCACTAAACGTTCT 58.839 36.000 0.00 0.00 0.00 3.01
284 285 6.399204 ACGATAATTGTCCACTAAACGTTC 57.601 37.500 0.00 0.00 0.00 3.95
285 286 6.399204 GACGATAATTGTCCACTAAACGTT 57.601 37.500 0.00 0.00 0.00 3.99
296 297 0.179067 TGGGCCGGACGATAATTGTC 60.179 55.000 5.05 0.00 35.60 3.18
297 298 0.179056 CTGGGCCGGACGATAATTGT 60.179 55.000 6.48 0.00 0.00 2.71
298 299 1.507141 GCTGGGCCGGACGATAATTG 61.507 60.000 18.84 0.00 0.00 2.32
299 300 1.227853 GCTGGGCCGGACGATAATT 60.228 57.895 18.84 0.00 0.00 1.40
300 301 2.426023 GCTGGGCCGGACGATAAT 59.574 61.111 18.84 0.00 0.00 1.28
301 302 3.078196 TGCTGGGCCGGACGATAA 61.078 61.111 18.84 0.00 0.00 1.75
302 303 3.845259 GTGCTGGGCCGGACGATA 61.845 66.667 18.84 0.00 0.00 2.92
306 307 4.329545 TTCTGTGCTGGGCCGGAC 62.330 66.667 18.84 14.54 0.00 4.79
307 308 4.329545 GTTCTGTGCTGGGCCGGA 62.330 66.667 18.84 0.01 0.00 5.14
308 309 3.850098 AAGTTCTGTGCTGGGCCGG 62.850 63.158 8.39 8.39 0.00 6.13
309 310 2.281761 AAGTTCTGTGCTGGGCCG 60.282 61.111 0.00 0.00 0.00 6.13
310 311 1.109323 AACAAGTTCTGTGCTGGGCC 61.109 55.000 0.00 0.00 38.67 5.80
311 312 0.312102 GAACAAGTTCTGTGCTGGGC 59.688 55.000 5.72 0.00 38.67 5.36
312 313 1.876156 GAGAACAAGTTCTGTGCTGGG 59.124 52.381 19.28 0.00 44.83 4.45
313 314 1.876156 GGAGAACAAGTTCTGTGCTGG 59.124 52.381 19.28 0.00 44.83 4.85
314 315 1.876156 GGGAGAACAAGTTCTGTGCTG 59.124 52.381 19.28 0.00 44.83 4.41
321 322 5.712152 AATGACAATGGGAGAACAAGTTC 57.288 39.130 4.82 4.82 39.78 3.01
322 323 6.209391 CCTTAATGACAATGGGAGAACAAGTT 59.791 38.462 0.00 0.00 0.00 2.66
323 324 5.711976 CCTTAATGACAATGGGAGAACAAGT 59.288 40.000 0.00 0.00 0.00 3.16
324 325 5.393461 GCCTTAATGACAATGGGAGAACAAG 60.393 44.000 0.00 0.00 0.00 3.16
325 326 4.462483 GCCTTAATGACAATGGGAGAACAA 59.538 41.667 0.00 0.00 0.00 2.83
326 327 4.016444 GCCTTAATGACAATGGGAGAACA 58.984 43.478 0.00 0.00 0.00 3.18
327 328 4.273318 AGCCTTAATGACAATGGGAGAAC 58.727 43.478 0.00 0.00 0.00 3.01
328 329 4.591321 AGCCTTAATGACAATGGGAGAA 57.409 40.909 0.00 0.00 0.00 2.87
329 330 4.591321 AAGCCTTAATGACAATGGGAGA 57.409 40.909 0.00 0.00 0.00 3.71
330 331 4.463891 ACAAAGCCTTAATGACAATGGGAG 59.536 41.667 0.00 0.00 0.00 4.30
331 332 4.415596 ACAAAGCCTTAATGACAATGGGA 58.584 39.130 0.00 0.00 0.00 4.37
332 333 4.806640 ACAAAGCCTTAATGACAATGGG 57.193 40.909 0.00 0.00 0.00 4.00
333 334 6.808212 CACTTACAAAGCCTTAATGACAATGG 59.192 38.462 0.00 0.00 0.00 3.16
334 335 7.592938 TCACTTACAAAGCCTTAATGACAATG 58.407 34.615 0.00 0.00 0.00 2.82
335 336 7.759489 TCACTTACAAAGCCTTAATGACAAT 57.241 32.000 0.00 0.00 0.00 2.71
336 337 7.067615 TGTTCACTTACAAAGCCTTAATGACAA 59.932 33.333 0.00 0.00 0.00 3.18
337 338 6.544197 TGTTCACTTACAAAGCCTTAATGACA 59.456 34.615 0.00 0.00 0.00 3.58
338 339 6.966021 TGTTCACTTACAAAGCCTTAATGAC 58.034 36.000 0.00 0.00 0.00 3.06
339 340 7.575414 TTGTTCACTTACAAAGCCTTAATGA 57.425 32.000 0.00 0.00 35.22 2.57
349 350 5.809562 CCATGTTGCTTTGTTCACTTACAAA 59.190 36.000 0.00 0.00 43.62 2.83
350 351 5.347342 CCATGTTGCTTTGTTCACTTACAA 58.653 37.500 0.00 0.00 36.30 2.41
351 352 4.202101 CCCATGTTGCTTTGTTCACTTACA 60.202 41.667 0.00 0.00 0.00 2.41
352 353 4.298332 CCCATGTTGCTTTGTTCACTTAC 58.702 43.478 0.00 0.00 0.00 2.34
353 354 3.320541 CCCCATGTTGCTTTGTTCACTTA 59.679 43.478 0.00 0.00 0.00 2.24
354 355 2.102925 CCCCATGTTGCTTTGTTCACTT 59.897 45.455 0.00 0.00 0.00 3.16
355 356 1.688197 CCCCATGTTGCTTTGTTCACT 59.312 47.619 0.00 0.00 0.00 3.41
356 357 1.686052 TCCCCATGTTGCTTTGTTCAC 59.314 47.619 0.00 0.00 0.00 3.18
357 358 2.079170 TCCCCATGTTGCTTTGTTCA 57.921 45.000 0.00 0.00 0.00 3.18
358 359 2.299867 ACATCCCCATGTTGCTTTGTTC 59.700 45.455 0.00 0.00 40.66 3.18
359 360 2.328319 ACATCCCCATGTTGCTTTGTT 58.672 42.857 0.00 0.00 40.66 2.83
360 361 2.014010 ACATCCCCATGTTGCTTTGT 57.986 45.000 0.00 0.00 40.66 2.83
361 362 3.788333 CTACATCCCCATGTTGCTTTG 57.212 47.619 0.00 0.00 40.66 2.77
366 367 1.811558 CGGAGCTACATCCCCATGTTG 60.812 57.143 0.00 0.00 40.66 3.33
367 368 0.469917 CGGAGCTACATCCCCATGTT 59.530 55.000 0.00 0.00 40.66 2.71
368 369 0.398522 TCGGAGCTACATCCCCATGT 60.399 55.000 0.00 0.00 45.73 3.21
369 370 0.979665 ATCGGAGCTACATCCCCATG 59.020 55.000 0.00 0.00 35.82 3.66
370 371 0.979665 CATCGGAGCTACATCCCCAT 59.020 55.000 0.00 0.00 35.82 4.00
371 372 1.121407 CCATCGGAGCTACATCCCCA 61.121 60.000 0.00 0.00 35.82 4.96
372 373 1.122019 ACCATCGGAGCTACATCCCC 61.122 60.000 0.00 0.00 35.82 4.81
373 374 1.546476 CTACCATCGGAGCTACATCCC 59.454 57.143 0.00 0.00 35.82 3.85
374 375 2.490115 CTCTACCATCGGAGCTACATCC 59.510 54.545 0.00 0.00 35.88 3.51
375 376 3.840890 CTCTACCATCGGAGCTACATC 57.159 52.381 0.00 0.00 0.00 3.06
382 383 0.596083 CAAGCGCTCTACCATCGGAG 60.596 60.000 12.06 0.00 0.00 4.63
383 384 1.437573 CAAGCGCTCTACCATCGGA 59.562 57.895 12.06 0.00 0.00 4.55
384 385 2.240500 GCAAGCGCTCTACCATCGG 61.241 63.158 12.06 0.00 34.30 4.18
385 386 3.313750 GCAAGCGCTCTACCATCG 58.686 61.111 12.06 0.00 34.30 3.84
398 399 1.134159 AGCTCTCCCATGCTAAGCAAG 60.134 52.381 0.00 0.00 43.62 4.01
399 400 0.914644 AGCTCTCCCATGCTAAGCAA 59.085 50.000 0.00 0.00 43.62 3.91
400 401 1.793414 TAGCTCTCCCATGCTAAGCA 58.207 50.000 0.00 0.00 44.86 3.91
401 402 2.614987 CCATAGCTCTCCCATGCTAAGC 60.615 54.545 0.00 0.00 43.72 3.09
402 403 2.027377 CCCATAGCTCTCCCATGCTAAG 60.027 54.545 0.00 0.00 43.72 2.18
403 404 1.980765 CCCATAGCTCTCCCATGCTAA 59.019 52.381 0.00 0.00 43.72 3.09
404 405 1.649321 CCCATAGCTCTCCCATGCTA 58.351 55.000 0.00 0.00 44.47 3.49
405 406 1.132554 CCCCATAGCTCTCCCATGCT 61.133 60.000 0.00 0.00 42.67 3.79
406 407 1.130054 TCCCCATAGCTCTCCCATGC 61.130 60.000 0.00 0.00 0.00 4.06
407 408 1.558756 GATCCCCATAGCTCTCCCATG 59.441 57.143 0.00 0.00 0.00 3.66
408 409 1.898990 CGATCCCCATAGCTCTCCCAT 60.899 57.143 0.00 0.00 0.00 4.00
409 410 0.542938 CGATCCCCATAGCTCTCCCA 60.543 60.000 0.00 0.00 0.00 4.37
410 411 0.251832 TCGATCCCCATAGCTCTCCC 60.252 60.000 0.00 0.00 0.00 4.30
411 412 1.859302 ATCGATCCCCATAGCTCTCC 58.141 55.000 0.00 0.00 0.00 3.71
412 413 2.691011 GGTATCGATCCCCATAGCTCTC 59.309 54.545 0.00 0.00 0.00 3.20
413 414 2.624557 GGGTATCGATCCCCATAGCTCT 60.625 54.545 20.60 0.00 40.88 4.09
414 415 1.757699 GGGTATCGATCCCCATAGCTC 59.242 57.143 20.60 0.00 40.88 4.09
415 416 1.867363 GGGTATCGATCCCCATAGCT 58.133 55.000 20.60 0.00 40.88 3.32
422 423 2.172679 GAGAAGAGGGGTATCGATCCC 58.827 57.143 19.20 19.20 43.90 3.85
423 424 2.172679 GGAGAAGAGGGGTATCGATCC 58.827 57.143 0.00 3.07 0.00 3.36
424 425 2.877866 TGGAGAAGAGGGGTATCGATC 58.122 52.381 0.00 0.00 0.00 3.69
425 426 3.330126 TTGGAGAAGAGGGGTATCGAT 57.670 47.619 2.16 2.16 0.00 3.59
426 427 2.840640 TTGGAGAAGAGGGGTATCGA 57.159 50.000 0.00 0.00 0.00 3.59
427 428 4.423625 AAATTGGAGAAGAGGGGTATCG 57.576 45.455 0.00 0.00 0.00 2.92
447 448 7.736447 TCTGCAAAGAAAGGAAAAACAAAAA 57.264 28.000 0.00 0.00 0.00 1.94
448 449 7.065683 GGATCTGCAAAGAAAGGAAAAACAAAA 59.934 33.333 0.00 0.00 0.00 2.44
449 450 6.538381 GGATCTGCAAAGAAAGGAAAAACAAA 59.462 34.615 0.00 0.00 0.00 2.83
450 451 6.048509 GGATCTGCAAAGAAAGGAAAAACAA 58.951 36.000 0.00 0.00 0.00 2.83
451 452 5.128499 TGGATCTGCAAAGAAAGGAAAAACA 59.872 36.000 0.00 0.00 0.00 2.83
452 453 5.600696 TGGATCTGCAAAGAAAGGAAAAAC 58.399 37.500 0.00 0.00 0.00 2.43
453 454 5.867903 TGGATCTGCAAAGAAAGGAAAAA 57.132 34.783 0.00 0.00 0.00 1.94
454 455 5.867903 TTGGATCTGCAAAGAAAGGAAAA 57.132 34.783 0.00 0.00 0.00 2.29
455 456 5.128499 TGTTTGGATCTGCAAAGAAAGGAAA 59.872 36.000 0.00 0.00 0.00 3.13
456 457 4.648762 TGTTTGGATCTGCAAAGAAAGGAA 59.351 37.500 0.00 0.00 0.00 3.36
457 458 4.214310 TGTTTGGATCTGCAAAGAAAGGA 58.786 39.130 0.00 0.00 0.00 3.36
458 459 4.589216 TGTTTGGATCTGCAAAGAAAGG 57.411 40.909 0.00 0.00 0.00 3.11
459 460 6.907206 TTTTGTTTGGATCTGCAAAGAAAG 57.093 33.333 15.39 0.00 35.81 2.62
460 461 7.984050 TGTATTTTGTTTGGATCTGCAAAGAAA 59.016 29.630 13.06 13.06 33.66 2.52
461 462 7.495901 TGTATTTTGTTTGGATCTGCAAAGAA 58.504 30.769 3.22 3.22 33.25 2.52
462 463 7.048629 TGTATTTTGTTTGGATCTGCAAAGA 57.951 32.000 0.00 0.00 33.25 2.52
463 464 6.128742 GCTGTATTTTGTTTGGATCTGCAAAG 60.129 38.462 0.00 0.00 33.25 2.77
464 465 5.695816 GCTGTATTTTGTTTGGATCTGCAAA 59.304 36.000 0.00 0.00 0.00 3.68
465 466 5.229423 GCTGTATTTTGTTTGGATCTGCAA 58.771 37.500 0.00 0.00 0.00 4.08
466 467 4.321899 GGCTGTATTTTGTTTGGATCTGCA 60.322 41.667 0.00 0.00 0.00 4.41
467 468 4.176271 GGCTGTATTTTGTTTGGATCTGC 58.824 43.478 0.00 0.00 0.00 4.26
468 469 4.414852 CGGCTGTATTTTGTTTGGATCTG 58.585 43.478 0.00 0.00 0.00 2.90
469 470 3.443681 CCGGCTGTATTTTGTTTGGATCT 59.556 43.478 0.00 0.00 0.00 2.75
470 471 3.192633 ACCGGCTGTATTTTGTTTGGATC 59.807 43.478 0.00 0.00 0.00 3.36
471 472 3.161866 ACCGGCTGTATTTTGTTTGGAT 58.838 40.909 0.00 0.00 0.00 3.41
472 473 2.588620 ACCGGCTGTATTTTGTTTGGA 58.411 42.857 0.00 0.00 0.00 3.53
473 474 3.378911 AACCGGCTGTATTTTGTTTGG 57.621 42.857 0.00 0.00 0.00 3.28
474 475 4.116238 ACAAACCGGCTGTATTTTGTTTG 58.884 39.130 16.50 16.50 44.82 2.93
475 476 4.394439 ACAAACCGGCTGTATTTTGTTT 57.606 36.364 11.61 1.58 38.69 2.83
476 477 4.394439 AACAAACCGGCTGTATTTTGTT 57.606 36.364 19.85 19.85 43.80 2.83
477 478 4.394439 AAACAAACCGGCTGTATTTTGT 57.606 36.364 11.61 11.61 42.55 2.83
478 479 4.568760 ACAAAACAAACCGGCTGTATTTTG 59.431 37.500 21.57 21.57 33.61 2.44
479 480 4.568760 CACAAAACAAACCGGCTGTATTTT 59.431 37.500 10.03 5.83 0.00 1.82
480 481 4.116238 CACAAAACAAACCGGCTGTATTT 58.884 39.130 10.03 9.75 0.00 1.40
481 482 3.712187 CACAAAACAAACCGGCTGTATT 58.288 40.909 10.03 4.99 0.00 1.89
482 483 2.544903 GCACAAAACAAACCGGCTGTAT 60.545 45.455 10.03 0.75 0.00 2.29
483 484 1.202313 GCACAAAACAAACCGGCTGTA 60.202 47.619 10.03 0.00 0.00 2.74
484 485 0.459411 GCACAAAACAAACCGGCTGT 60.459 50.000 0.00 1.72 0.00 4.40
485 486 0.179113 AGCACAAAACAAACCGGCTG 60.179 50.000 0.00 0.90 0.00 4.85
486 487 0.179113 CAGCACAAAACAAACCGGCT 60.179 50.000 0.00 0.00 0.00 5.52
487 488 0.179124 TCAGCACAAAACAAACCGGC 60.179 50.000 0.00 0.00 0.00 6.13
488 489 1.403679 TCTCAGCACAAAACAAACCGG 59.596 47.619 0.00 0.00 0.00 5.28
489 490 2.354510 TCTCTCAGCACAAAACAAACCG 59.645 45.455 0.00 0.00 0.00 4.44
490 491 3.627577 TCTCTCTCAGCACAAAACAAACC 59.372 43.478 0.00 0.00 0.00 3.27
491 492 4.787882 GCTCTCTCTCAGCACAAAACAAAC 60.788 45.833 0.00 0.00 36.82 2.93
492 493 3.313526 GCTCTCTCTCAGCACAAAACAAA 59.686 43.478 0.00 0.00 36.82 2.83
493 494 2.874701 GCTCTCTCTCAGCACAAAACAA 59.125 45.455 0.00 0.00 36.82 2.83
494 495 2.158914 TGCTCTCTCTCAGCACAAAACA 60.159 45.455 0.00 0.00 42.09 2.83
495 496 2.487934 TGCTCTCTCTCAGCACAAAAC 58.512 47.619 0.00 0.00 42.09 2.43
496 497 2.916702 TGCTCTCTCTCAGCACAAAA 57.083 45.000 0.00 0.00 42.09 2.44
502 503 4.278170 ACTGTGTATATGCTCTCTCTCAGC 59.722 45.833 0.00 0.00 37.40 4.26
503 504 6.389830 AACTGTGTATATGCTCTCTCTCAG 57.610 41.667 0.00 0.00 0.00 3.35
504 505 6.153510 ACAAACTGTGTATATGCTCTCTCTCA 59.846 38.462 0.00 0.00 39.29 3.27
505 506 6.475076 CACAAACTGTGTATATGCTCTCTCTC 59.525 42.308 0.00 0.00 43.08 3.20
506 507 6.336566 CACAAACTGTGTATATGCTCTCTCT 58.663 40.000 0.00 0.00 43.08 3.10
507 508 6.580963 CACAAACTGTGTATATGCTCTCTC 57.419 41.667 0.00 0.00 43.08 3.20
521 522 1.024271 ATGTTCGCAGCACAAACTGT 58.976 45.000 0.00 0.00 39.96 3.55
523 524 2.032030 GTGTATGTTCGCAGCACAAACT 60.032 45.455 0.00 0.00 37.11 2.66
547 548 3.558505 CCTGCGATTATTATTGCACTGC 58.441 45.455 2.43 0.00 44.44 4.40
548 549 3.251729 AGCCTGCGATTATTATTGCACTG 59.748 43.478 2.43 0.00 44.44 3.66
549 550 3.251729 CAGCCTGCGATTATTATTGCACT 59.748 43.478 2.43 0.00 44.44 4.40
550 551 3.003689 ACAGCCTGCGATTATTATTGCAC 59.996 43.478 2.43 0.00 44.44 4.57
551 552 3.213506 ACAGCCTGCGATTATTATTGCA 58.786 40.909 6.46 6.46 46.56 4.08
553 554 5.238432 TGGTAACAGCCTGCGATTATTATTG 59.762 40.000 0.00 0.00 46.17 1.90
554 555 5.373222 TGGTAACAGCCTGCGATTATTATT 58.627 37.500 0.00 0.00 46.17 1.40
555 556 4.968259 TGGTAACAGCCTGCGATTATTAT 58.032 39.130 0.00 0.00 46.17 1.28
556 557 4.409718 TGGTAACAGCCTGCGATTATTA 57.590 40.909 0.00 0.00 46.17 0.98
591 602 8.730680 GTCTGCTTTTCTACAAAGAATATTCCA 58.269 33.333 11.92 0.00 41.36 3.53
592 603 7.905493 CGTCTGCTTTTCTACAAAGAATATTCC 59.095 37.037 11.92 0.00 41.36 3.01
612 623 2.543067 ATCCCCTTTCAGCCGTCTGC 62.543 60.000 0.00 0.00 40.13 4.26
615 626 0.539986 TACATCCCCTTTCAGCCGTC 59.460 55.000 0.00 0.00 0.00 4.79
621 632 2.832838 TCTGAGCTACATCCCCTTTCA 58.167 47.619 0.00 0.00 0.00 2.69
622 633 3.495806 CCATCTGAGCTACATCCCCTTTC 60.496 52.174 0.00 0.00 0.00 2.62
680 691 0.681733 CTGGAGATGTGGGGTATCGG 59.318 60.000 0.00 0.00 0.00 4.18
739 750 1.002468 CAGCAAACACACAGTGGCTAC 60.002 52.381 5.31 0.00 39.00 3.58
795 818 1.792367 GCAAGGAAAATGCGTTTGGAC 59.208 47.619 4.29 0.00 33.57 4.02
819 842 3.920231 AGCTTCTGGATGATAGCAACA 57.080 42.857 0.00 0.00 33.97 3.33
875 898 1.909700 AAGGAGCGGCAAATTCAGAA 58.090 45.000 1.45 0.00 0.00 3.02
898 921 9.309516 CGTTCATTGGTACTGTATAATGTAAGT 57.690 33.333 18.71 0.00 33.46 2.24
903 926 8.587952 TGATCGTTCATTGGTACTGTATAATG 57.412 34.615 15.71 15.71 33.09 1.90
908 931 6.273071 CAGATGATCGTTCATTGGTACTGTA 58.727 40.000 10.22 0.00 42.73 2.74
909 932 5.111989 CAGATGATCGTTCATTGGTACTGT 58.888 41.667 10.22 0.00 42.73 3.55
910 933 4.509230 CCAGATGATCGTTCATTGGTACTG 59.491 45.833 19.20 15.91 42.73 2.74
911 934 4.697514 CCAGATGATCGTTCATTGGTACT 58.302 43.478 19.20 8.30 42.73 2.73
912 935 3.248602 GCCAGATGATCGTTCATTGGTAC 59.751 47.826 23.60 13.54 42.73 3.34
947 1015 0.535102 GATTACCCCATGGCGAGTGG 60.535 60.000 6.09 4.08 36.47 4.00
961 1029 0.646895 CGTTAACCGCGGTGGATTAC 59.353 55.000 34.95 22.28 42.00 1.89
962 1030 3.047752 CGTTAACCGCGGTGGATTA 57.952 52.632 34.95 18.17 42.00 1.75
963 1031 3.879159 CGTTAACCGCGGTGGATT 58.121 55.556 34.95 19.41 42.00 3.01
976 1056 2.678934 AGACCCGGCTCTGCGTTA 60.679 61.111 0.00 0.00 0.00 3.18
1141 1221 4.415332 TCAGTCGACGCCGGAAGC 62.415 66.667 5.05 0.00 36.24 3.86
1142 1222 2.504244 GTCAGTCGACGCCGGAAG 60.504 66.667 5.05 0.00 36.24 3.46
1164 1244 0.651551 CGCATGCAGAGAAGAAGAGC 59.348 55.000 19.57 0.00 0.00 4.09
1188 1268 2.202703 TATCGGCGCAACGTCTGTCA 62.203 55.000 10.83 0.00 34.94 3.58
1269 1403 0.320374 AACCGTCGGCTCAAGAATCA 59.680 50.000 12.28 0.00 0.00 2.57
1271 1405 0.673644 CCAACCGTCGGCTCAAGAAT 60.674 55.000 12.28 0.00 0.00 2.40
1288 1422 1.980036 GGTAACTAAGACCCACCACCA 59.020 52.381 0.00 0.00 0.00 4.17
1289 1423 2.775911 GGTAACTAAGACCCACCACC 57.224 55.000 0.00 0.00 0.00 4.61
1303 1437 1.555533 CCAGGAGAGGACCAAGGTAAC 59.444 57.143 0.00 0.00 0.00 2.50
1586 1732 0.182061 TAGATGTCCGGGTAGTCGCT 59.818 55.000 0.00 0.00 0.00 4.93
1712 1864 1.204467 AGCTGCTGAGAAGTGAGCTAC 59.796 52.381 0.00 0.00 38.23 3.58
1716 1868 2.747396 AGAAGCTGCTGAGAAGTGAG 57.253 50.000 1.35 0.00 0.00 3.51
1731 2169 3.067106 TGACGCTAGAGCCAAAAAGAAG 58.933 45.455 0.00 0.00 37.91 2.85
1865 2316 5.438761 AGGCTTACAACACAAAACAGATC 57.561 39.130 0.00 0.00 0.00 2.75
1868 2319 6.475402 CCTAAAAGGCTTACAACACAAAACAG 59.525 38.462 0.00 0.00 0.00 3.16
1972 4024 6.486657 GCAAATATTAGTCCCAGAGTTATGCA 59.513 38.462 0.00 0.00 0.00 3.96
1973 4025 6.072452 GGCAAATATTAGTCCCAGAGTTATGC 60.072 42.308 0.00 0.00 0.00 3.14
1974 4026 6.998074 TGGCAAATATTAGTCCCAGAGTTATG 59.002 38.462 0.00 0.00 0.00 1.90
1975 4027 7.149202 TGGCAAATATTAGTCCCAGAGTTAT 57.851 36.000 0.00 0.00 0.00 1.89
1976 4028 6.569127 TGGCAAATATTAGTCCCAGAGTTA 57.431 37.500 0.00 0.00 0.00 2.24
1977 4029 5.450818 TGGCAAATATTAGTCCCAGAGTT 57.549 39.130 0.00 0.00 0.00 3.01
1978 4030 5.653255 ATGGCAAATATTAGTCCCAGAGT 57.347 39.130 0.00 0.00 0.00 3.24
1979 4031 5.474876 GGAATGGCAAATATTAGTCCCAGAG 59.525 44.000 0.00 0.00 0.00 3.35
1980 4032 5.103728 TGGAATGGCAAATATTAGTCCCAGA 60.104 40.000 0.00 0.00 0.00 3.86
1982 4034 5.136068 TGGAATGGCAAATATTAGTCCCA 57.864 39.130 0.00 0.86 0.00 4.37
2076 4163 3.256383 TGCATGAAAAGTTGACATGAGGG 59.744 43.478 19.80 1.96 42.41 4.30
2092 4179 3.292492 AGCCTTGAAGATGATGCATGA 57.708 42.857 2.46 0.00 0.00 3.07
2147 4234 7.594758 TCTGTTTGATGGAAGAAATTTAAAGCG 59.405 33.333 0.00 0.00 0.00 4.68
2161 4248 4.656100 TCCAGGAAATCTGTTTGATGGA 57.344 40.909 0.00 0.00 41.83 3.41
2182 4270 2.335316 TGCGTCCCAGTTTGTAGTTT 57.665 45.000 0.00 0.00 0.00 2.66
2208 4296 4.757149 ACAAAGCTTGTGAAGATAGTGGAC 59.243 41.667 0.00 0.00 43.48 4.02
2244 4335 0.586802 GCAATTCGGCGAGGGATAAC 59.413 55.000 10.46 0.00 0.00 1.89
2253 4344 2.705826 GCTGAGAGCAATTCGGCG 59.294 61.111 0.00 0.00 41.89 6.46
2277 4368 1.484444 GGCAGGACTTGGTGGAGACT 61.484 60.000 0.00 0.00 0.00 3.24
2279 4370 2.583441 CGGCAGGACTTGGTGGAGA 61.583 63.158 0.00 0.00 0.00 3.71
2307 4398 3.225104 AGTTTGCATCCAACAGTGACAT 58.775 40.909 0.00 0.00 0.00 3.06
2318 4409 4.454728 TTCTGGCATTTAGTTTGCATCC 57.545 40.909 0.00 0.00 41.95 3.51
2521 4617 4.410228 AGGCAGAAGATCTAAGGTGCATTA 59.590 41.667 16.10 0.00 32.42 1.90
2618 4714 7.725251 ACCATGATGTCTTTTTCTTTAAGCAA 58.275 30.769 0.00 0.00 0.00 3.91
2634 4730 6.767456 TGCCTTTATTTTGAAACCATGATGT 58.233 32.000 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.