Multiple sequence alignment - TraesCS4B01G184800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G184800 chr4B 100.000 3032 0 0 1 3032 404189018 404185987 0.000000e+00 5600.0
1 TraesCS4B01G184800 chr4D 90.307 1919 94 34 741 2606 323618291 323616412 0.000000e+00 2429.0
2 TraesCS4B01G184800 chr4A 85.766 2227 161 43 1 2143 147639883 147642037 0.000000e+00 2213.0
3 TraesCS4B01G184800 chr4A 88.235 238 22 6 2800 3032 536197245 536197009 2.300000e-71 279.0
4 TraesCS4B01G184800 chr4A 90.476 147 10 4 2128 2273 147642059 147642202 1.110000e-44 191.0
5 TraesCS4B01G184800 chr2B 92.766 235 14 3 2800 3032 669219488 669219255 1.350000e-88 337.0
6 TraesCS4B01G184800 chr2B 90.717 237 17 4 2800 3032 140166266 140166031 8.160000e-81 311.0
7 TraesCS4B01G184800 chr6B 90.496 242 19 3 2794 3032 638470363 638470123 1.750000e-82 316.0
8 TraesCS4B01G184800 chr6B 89.407 236 20 5 2800 3032 254012001 254011768 2.960000e-75 292.0
9 TraesCS4B01G184800 chrUn 90.254 236 19 4 2800 3032 304833682 304833448 3.800000e-79 305.0
10 TraesCS4B01G184800 chr5B 89.407 236 20 5 2801 3032 227955525 227955291 2.960000e-75 292.0
11 TraesCS4B01G184800 chr5B 92.188 64 5 0 1064 1127 51633958 51634021 1.160000e-14 91.6
12 TraesCS4B01G184800 chr2A 88.235 238 22 6 2800 3032 192087707 192087471 2.300000e-71 279.0
13 TraesCS4B01G184800 chr6A 88.186 237 22 6 2801 3032 539191612 539191377 8.280000e-71 278.0
14 TraesCS4B01G184800 chr5D 92.188 64 5 0 1064 1127 48836454 48836517 1.160000e-14 91.6
15 TraesCS4B01G184800 chr3D 95.833 48 1 1 2644 2691 10798183 10798229 3.240000e-10 76.8
16 TraesCS4B01G184800 chr3B 92.593 54 3 1 2644 2697 15075801 15075853 3.240000e-10 76.8
17 TraesCS4B01G184800 chr3B 95.652 46 1 1 2644 2688 25936579 25936624 4.190000e-09 73.1
18 TraesCS4B01G184800 chr3B 97.561 41 1 0 2648 2688 26261926 26261966 1.510000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G184800 chr4B 404185987 404189018 3031 True 5600 5600 100.000 1 3032 1 chr4B.!!$R1 3031
1 TraesCS4B01G184800 chr4D 323616412 323618291 1879 True 2429 2429 90.307 741 2606 1 chr4D.!!$R1 1865
2 TraesCS4B01G184800 chr4A 147639883 147642202 2319 False 1202 2213 88.121 1 2273 2 chr4A.!!$F1 2272

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
562 576 0.177141 GGGCATCTGCGGTTACACTA 59.823 55.0 0.00 0.00 43.26 2.74 F
684 700 0.387367 GTGAGCATCCGCGATCGTAT 60.387 55.0 17.81 5.48 45.49 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1607 1703 0.040067 CAAGAAGTGGGCGTTGCTTC 60.040 55.0 0.0 0.00 38.97 3.86 R
2657 2834 0.106167 GGTTATCCTTTGGGGCTCCC 60.106 60.0 0.0 0.72 45.71 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.753296 GGTCTCTCAGAGCATGCATAC 58.247 52.381 21.98 10.82 42.03 2.39
42 43 4.815308 GTCTCTCAGAGCATGCATACAAAT 59.185 41.667 21.98 0.00 0.00 2.32
77 78 5.174943 GGACACAAATAAAACAAAAGCTCCG 59.825 40.000 0.00 0.00 0.00 4.63
78 79 5.047188 ACACAAATAAAACAAAAGCTCCGG 58.953 37.500 0.00 0.00 0.00 5.14
89 90 1.767759 AAGCTCCGGATGGGATTTTG 58.232 50.000 3.57 0.00 46.04 2.44
94 95 1.042559 CCGGATGGGATTTTGGGTGG 61.043 60.000 0.00 0.00 38.47 4.61
98 99 3.074369 GGGATTTTGGGTGGGCCG 61.074 66.667 0.00 0.00 34.97 6.13
99 100 2.036572 GGATTTTGGGTGGGCCGA 59.963 61.111 0.00 0.00 34.97 5.54
100 101 1.608046 GGATTTTGGGTGGGCCGAA 60.608 57.895 0.00 0.00 34.97 4.30
126 127 4.242475 GTCATAGTTTGACGTGATGGACA 58.758 43.478 0.00 0.00 45.00 4.02
127 128 4.327357 GTCATAGTTTGACGTGATGGACAG 59.673 45.833 0.00 0.00 45.00 3.51
128 129 1.512926 AGTTTGACGTGATGGACAGC 58.487 50.000 0.00 0.00 0.00 4.40
147 148 1.301293 CAGACCCTCCCAAAGCTCC 59.699 63.158 0.00 0.00 0.00 4.70
151 152 2.125512 CCTCCCAAAGCTCCGTCG 60.126 66.667 0.00 0.00 0.00 5.12
152 153 2.657237 CTCCCAAAGCTCCGTCGT 59.343 61.111 0.00 0.00 0.00 4.34
155 156 0.882927 TCCCAAAGCTCCGTCGTTTG 60.883 55.000 0.00 0.00 0.00 2.93
162 163 0.883370 GCTCCGTCGTTTGGGTTTCT 60.883 55.000 0.00 0.00 0.00 2.52
169 170 3.691498 GTCGTTTGGGTTTCTGTTGAAG 58.309 45.455 0.00 0.00 33.28 3.02
185 186 1.073177 GAAGAAATTCGGGCGTTCGA 58.927 50.000 0.00 0.00 37.38 3.71
194 195 2.125832 GGCGTTCGAATCGGTCCA 60.126 61.111 17.51 0.00 0.00 4.02
213 214 6.455113 CGGTCCAGACATTTTTATACTTCACG 60.455 42.308 0.00 0.00 0.00 4.35
214 215 6.370718 GGTCCAGACATTTTTATACTTCACGT 59.629 38.462 0.00 0.00 0.00 4.49
217 218 7.021196 CCAGACATTTTTATACTTCACGTTGG 58.979 38.462 0.00 0.00 0.00 3.77
218 219 7.094975 CCAGACATTTTTATACTTCACGTTGGA 60.095 37.037 0.00 0.00 0.00 3.53
240 241 5.008316 GGATGTATAAATTGTCCGGACCAAC 59.992 44.000 31.19 15.33 0.00 3.77
270 271 8.735315 TCCAAATATTTACACGTGATTTGATGT 58.265 29.630 27.84 8.33 38.99 3.06
274 275 9.773328 AATATTTACACGTGATTTGATGTTCAG 57.227 29.630 25.01 0.00 0.00 3.02
280 281 3.665409 CGTGATTTGATGTTCAGTGTTGC 59.335 43.478 0.00 0.00 0.00 4.17
282 283 2.118228 TTTGATGTTCAGTGTTGCGC 57.882 45.000 0.00 0.00 0.00 6.09
284 285 0.867746 TGATGTTCAGTGTTGCGCTC 59.132 50.000 9.73 2.14 0.00 5.03
287 288 0.599991 TGTTCAGTGTTGCGCTCGAT 60.600 50.000 9.73 0.00 0.00 3.59
296 297 4.025730 AGTGTTGCGCTCGATGTTTATATG 60.026 41.667 9.73 0.00 0.00 1.78
364 365 8.436046 CTAGTGATTCTAGTAGTTTCCGTACT 57.564 38.462 0.00 0.00 40.72 2.73
365 366 7.700022 AGTGATTCTAGTAGTTTCCGTACTT 57.300 36.000 0.00 0.00 32.81 2.24
366 367 7.760437 AGTGATTCTAGTAGTTTCCGTACTTC 58.240 38.462 0.00 0.00 32.81 3.01
367 368 7.392673 AGTGATTCTAGTAGTTTCCGTACTTCA 59.607 37.037 0.00 0.00 32.81 3.02
389 390 2.096980 TGTGTCGTCGAGTCATGGATAC 59.903 50.000 0.00 0.00 0.00 2.24
462 469 7.213178 ACTCATATGGTTAGATTTCTTGGGT 57.787 36.000 2.13 0.00 0.00 4.51
463 470 7.056635 ACTCATATGGTTAGATTTCTTGGGTG 58.943 38.462 2.13 0.00 0.00 4.61
473 481 5.835582 AGATTTCTTGGGTGGAATCAATCT 58.164 37.500 0.00 0.00 0.00 2.40
476 484 4.226427 TCTTGGGTGGAATCAATCTGAG 57.774 45.455 0.00 0.00 0.00 3.35
482 490 4.397417 GGGTGGAATCAATCTGAGAAGTTG 59.603 45.833 0.00 0.00 0.00 3.16
491 499 9.730705 AATCAATCTGAGAAGTTGTAGATTTGA 57.269 29.630 0.00 0.00 37.68 2.69
497 505 7.388776 TCTGAGAAGTTGTAGATTTGACAATGG 59.611 37.037 0.00 0.00 38.94 3.16
500 508 5.376854 AGTTGTAGATTTGACAATGGTGC 57.623 39.130 0.00 0.00 38.94 5.01
503 511 6.714810 AGTTGTAGATTTGACAATGGTGCTTA 59.285 34.615 0.00 0.00 38.94 3.09
504 512 7.394359 AGTTGTAGATTTGACAATGGTGCTTAT 59.606 33.333 0.00 0.00 38.94 1.73
537 551 5.095691 TCAGACTTTTCAAAGATGTTCGC 57.904 39.130 6.29 0.00 39.31 4.70
543 557 4.903638 TTTCAAAGATGTTCGCTACGAG 57.096 40.909 0.00 0.00 37.14 4.18
544 558 2.876091 TCAAAGATGTTCGCTACGAGG 58.124 47.619 0.00 0.00 37.14 4.63
545 559 1.927174 CAAAGATGTTCGCTACGAGGG 59.073 52.381 0.00 0.00 37.14 4.30
546 560 0.179108 AAGATGTTCGCTACGAGGGC 60.179 55.000 0.00 0.00 37.14 5.19
547 561 1.141019 GATGTTCGCTACGAGGGCA 59.859 57.895 0.00 0.00 37.14 5.36
548 562 0.249489 GATGTTCGCTACGAGGGCAT 60.249 55.000 0.00 0.00 37.14 4.40
549 563 0.249489 ATGTTCGCTACGAGGGCATC 60.249 55.000 0.00 0.00 37.14 3.91
550 564 1.320344 TGTTCGCTACGAGGGCATCT 61.320 55.000 0.00 0.00 37.14 2.90
551 565 0.872021 GTTCGCTACGAGGGCATCTG 60.872 60.000 0.00 0.00 37.14 2.90
552 566 2.629050 TTCGCTACGAGGGCATCTGC 62.629 60.000 0.00 0.00 37.14 4.26
553 567 2.659897 GCTACGAGGGCATCTGCG 60.660 66.667 0.00 0.00 43.26 5.18
554 568 2.028190 CTACGAGGGCATCTGCGG 59.972 66.667 0.00 0.00 43.26 5.69
555 569 2.758327 TACGAGGGCATCTGCGGT 60.758 61.111 0.00 0.00 43.26 5.68
556 570 2.298158 CTACGAGGGCATCTGCGGTT 62.298 60.000 0.00 0.00 43.26 4.44
557 571 1.038681 TACGAGGGCATCTGCGGTTA 61.039 55.000 0.00 0.00 43.26 2.85
558 572 1.883084 CGAGGGCATCTGCGGTTAC 60.883 63.158 0.00 0.00 43.26 2.50
559 573 1.220749 GAGGGCATCTGCGGTTACA 59.779 57.895 0.00 0.00 43.26 2.41
560 574 1.078426 AGGGCATCTGCGGTTACAC 60.078 57.895 0.00 0.00 43.26 2.90
561 575 1.078426 GGGCATCTGCGGTTACACT 60.078 57.895 0.00 0.00 43.26 3.55
562 576 0.177141 GGGCATCTGCGGTTACACTA 59.823 55.000 0.00 0.00 43.26 2.74
563 577 1.287425 GGCATCTGCGGTTACACTAC 58.713 55.000 0.00 0.00 43.26 2.73
564 578 0.921347 GCATCTGCGGTTACACTACG 59.079 55.000 0.00 0.00 0.00 3.51
565 579 1.468565 GCATCTGCGGTTACACTACGA 60.469 52.381 0.00 0.00 0.00 3.43
566 580 2.451132 CATCTGCGGTTACACTACGAG 58.549 52.381 0.00 0.00 0.00 4.18
567 581 0.806868 TCTGCGGTTACACTACGAGG 59.193 55.000 0.00 0.00 0.00 4.63
568 582 0.801067 CTGCGGTTACACTACGAGGC 60.801 60.000 0.00 0.00 0.00 4.70
573 587 2.615447 CGGTTACACTACGAGGCATCTA 59.385 50.000 0.00 0.00 0.00 1.98
576 590 1.022735 ACACTACGAGGCATCTACGG 58.977 55.000 0.00 0.00 0.00 4.02
584 598 2.098607 CGAGGCATCTACGGTTACTTCA 59.901 50.000 0.00 0.00 0.00 3.02
592 606 7.126398 GCATCTACGGTTACTTCATCAATTTC 58.874 38.462 0.00 0.00 0.00 2.17
595 609 8.786826 TCTACGGTTACTTCATCAATTTCAAT 57.213 30.769 0.00 0.00 0.00 2.57
600 614 9.787532 CGGTTACTTCATCAATTTCAATATGTT 57.212 29.630 0.00 0.00 0.00 2.71
622 638 7.601856 TGTTTTCAGCCAATATCTTAAAGGTG 58.398 34.615 0.00 0.00 0.00 4.00
632 648 7.121759 CCAATATCTTAAAGGTGCTCATATGGG 59.878 40.741 2.13 0.00 0.00 4.00
652 668 5.868454 TGGGTACATATGGATGAATGAGTG 58.132 41.667 7.80 0.00 36.48 3.51
656 672 6.586463 GGTACATATGGATGAATGAGTGTACG 59.414 42.308 7.80 0.00 40.72 3.67
678 694 2.101575 GTACGTGAGCATCCGCGA 59.898 61.111 8.23 0.00 45.49 5.87
680 696 1.008881 TACGTGAGCATCCGCGATC 60.009 57.895 8.23 0.00 45.49 3.69
684 700 0.387367 GTGAGCATCCGCGATCGTAT 60.387 55.000 17.81 5.48 45.49 3.06
688 704 0.663269 GCATCCGCGATCGTATGTCA 60.663 55.000 17.81 0.00 34.95 3.58
689 705 1.766069 CATCCGCGATCGTATGTCAA 58.234 50.000 17.81 0.00 28.99 3.18
690 706 2.124122 CATCCGCGATCGTATGTCAAA 58.876 47.619 17.81 0.00 28.99 2.69
717 733 5.457650 AAAATTTGGTGAACGGAAAAACG 57.542 34.783 0.00 0.00 40.31 3.60
720 736 0.394080 TGGTGAACGGAAAAACGGGT 60.394 50.000 0.00 0.00 38.39 5.28
905 986 1.966451 CTCCCTCGTTTGCCACCAC 60.966 63.158 0.00 0.00 0.00 4.16
911 992 0.466543 TCGTTTGCCACCACTGTACT 59.533 50.000 0.00 0.00 0.00 2.73
912 993 1.687660 TCGTTTGCCACCACTGTACTA 59.312 47.619 0.00 0.00 0.00 1.82
913 994 1.796459 CGTTTGCCACCACTGTACTAC 59.204 52.381 0.00 0.00 0.00 2.73
914 995 2.803852 CGTTTGCCACCACTGTACTACA 60.804 50.000 0.00 0.00 0.00 2.74
950 1033 0.535780 TAGCTTGCAGTGCTTGTGCT 60.536 50.000 17.60 19.86 41.78 4.40
1041 1124 4.373116 TTCGTGGAGGAGGTGCGC 62.373 66.667 0.00 0.00 0.00 6.09
1147 1230 4.517285 ACCCATTCTGCTATGTACAAGTG 58.483 43.478 0.00 0.00 0.00 3.16
1149 1232 4.194640 CCATTCTGCTATGTACAAGTGCT 58.805 43.478 0.00 0.00 0.00 4.40
1150 1233 5.359756 CCATTCTGCTATGTACAAGTGCTA 58.640 41.667 0.00 0.00 0.00 3.49
1151 1234 5.464722 CCATTCTGCTATGTACAAGTGCTAG 59.535 44.000 0.00 0.00 0.00 3.42
1254 1340 1.204146 GGGACTCCTACTTCATGGCA 58.796 55.000 0.00 0.00 0.00 4.92
1356 1445 0.469331 CCGGACTATGTGGAGGGCTA 60.469 60.000 0.00 0.00 0.00 3.93
1376 1465 1.692411 ACTCTGTTTTTGGTCCTGGC 58.308 50.000 0.00 0.00 0.00 4.85
1378 1467 1.882623 CTCTGTTTTTGGTCCTGGCTC 59.117 52.381 0.00 0.00 0.00 4.70
1379 1468 0.593128 CTGTTTTTGGTCCTGGCTCG 59.407 55.000 0.00 0.00 0.00 5.03
1490 1582 4.989279 ATTCCAATTTTCACCATCGGAG 57.011 40.909 0.00 0.00 0.00 4.63
1501 1593 1.230635 CCATCGGAGCTAATTGGCGG 61.231 60.000 8.26 2.43 37.29 6.13
1511 1603 4.993905 AGCTAATTGGCGGTTTGATTTAC 58.006 39.130 8.26 0.00 37.29 2.01
1513 1605 4.798387 GCTAATTGGCGGTTTGATTTACAG 59.202 41.667 0.00 0.00 0.00 2.74
1514 1606 5.392595 GCTAATTGGCGGTTTGATTTACAGA 60.393 40.000 0.00 0.00 0.00 3.41
1518 1612 3.886505 TGGCGGTTTGATTTACAGAGTTT 59.113 39.130 0.00 0.00 0.00 2.66
1592 1688 1.501337 CGAGCAACAGCAAGTCAGCA 61.501 55.000 8.59 0.00 36.85 4.41
1715 1824 1.065401 CAGGTGAAAAGCGTCAGCAAA 59.935 47.619 16.15 0.00 46.25 3.68
1857 1966 4.371417 TCCGGCCTCACCTACGGT 62.371 66.667 0.00 0.00 46.06 4.83
2132 2265 2.427095 GCACTTGTCCTGTGTTTCCTTT 59.573 45.455 0.00 0.00 37.70 3.11
2202 2371 5.682943 TTTCATACAGAAAGGTTTGGACG 57.317 39.130 0.00 0.00 41.17 4.79
2213 2382 1.472026 GGTTTGGACGGCTATTCGCTA 60.472 52.381 0.00 0.00 39.13 4.26
2246 2416 6.378280 GGTGGTGTTAGGATTTCATGAAGATT 59.622 38.462 8.41 0.00 0.00 2.40
2275 2445 2.619697 TTGGCCAATGGGAAAGATGA 57.380 45.000 16.05 0.00 35.59 2.92
2308 2478 6.789262 TCTTTTATCAAAGAGCATTGCTAGC 58.211 36.000 11.96 8.10 42.99 3.42
2311 2481 2.362736 TCAAAGAGCATTGCTAGCCAG 58.637 47.619 11.96 2.86 39.88 4.85
2328 2498 1.403679 CCAGCCGAAACTTTTCACACA 59.596 47.619 2.77 0.00 37.01 3.72
2340 2510 2.093306 TTCACACAATAGTCAGCCGG 57.907 50.000 0.00 0.00 0.00 6.13
2390 2565 0.457443 TGCTATCTCACGGTGCAGAG 59.543 55.000 2.51 0.44 0.00 3.35
2391 2566 0.457851 GCTATCTCACGGTGCAGAGT 59.542 55.000 2.51 0.00 33.63 3.24
2406 2581 1.061131 CAGAGTTTTGTATCGGCTGCG 59.939 52.381 0.00 0.00 0.00 5.18
2410 2585 0.808125 TTTTGTATCGGCTGCGCATT 59.192 45.000 12.24 0.00 0.00 3.56
2425 2600 0.317799 GCATTGGGCACAACATGTCA 59.682 50.000 1.86 0.00 43.97 3.58
2445 2620 3.058983 TCAGTGTGCACATCAATTTCGTC 60.059 43.478 24.69 5.70 0.00 4.20
2486 2661 0.655733 ACGCTTTCTTGACGTTGTGG 59.344 50.000 0.00 0.00 36.46 4.17
2493 2668 5.732247 GCTTTCTTGACGTTGTGGTTGTATT 60.732 40.000 0.00 0.00 0.00 1.89
2494 2669 6.512091 GCTTTCTTGACGTTGTGGTTGTATTA 60.512 38.462 0.00 0.00 0.00 0.98
2496 2671 7.499321 TTCTTGACGTTGTGGTTGTATTATT 57.501 32.000 0.00 0.00 0.00 1.40
2497 2672 6.893759 TCTTGACGTTGTGGTTGTATTATTG 58.106 36.000 0.00 0.00 0.00 1.90
2507 2682 8.731275 TGTGGTTGTATTATTGATTGACTAGG 57.269 34.615 0.00 0.00 0.00 3.02
2510 2685 9.967451 TGGTTGTATTATTGATTGACTAGGAAA 57.033 29.630 0.00 0.00 0.00 3.13
2561 2738 9.835389 TTTTTCATGAGAAACTTTCAATCCATT 57.165 25.926 7.30 0.00 43.09 3.16
2562 2739 9.835389 TTTTCATGAGAAACTTTCAATCCATTT 57.165 25.926 4.34 0.00 43.09 2.32
2629 2806 9.833182 ACAAAAATTACAACAACAACAAAATCC 57.167 25.926 0.00 0.00 0.00 3.01
2634 2811 9.877178 AATTACAACAACAACAAAATCCTTACA 57.123 25.926 0.00 0.00 0.00 2.41
2635 2812 9.877178 ATTACAACAACAACAAAATCCTTACAA 57.123 25.926 0.00 0.00 0.00 2.41
2636 2813 7.826260 ACAACAACAACAAAATCCTTACAAG 57.174 32.000 0.00 0.00 0.00 3.16
2637 2814 7.607250 ACAACAACAACAAAATCCTTACAAGA 58.393 30.769 0.00 0.00 0.00 3.02
2638 2815 7.759433 ACAACAACAACAAAATCCTTACAAGAG 59.241 33.333 0.00 0.00 0.00 2.85
2639 2816 6.273071 ACAACAACAAAATCCTTACAAGAGC 58.727 36.000 0.00 0.00 0.00 4.09
2640 2817 5.453567 ACAACAAAATCCTTACAAGAGCC 57.546 39.130 0.00 0.00 0.00 4.70
2641 2818 4.280929 ACAACAAAATCCTTACAAGAGCCC 59.719 41.667 0.00 0.00 0.00 5.19
2642 2819 3.431415 ACAAAATCCTTACAAGAGCCCC 58.569 45.455 0.00 0.00 0.00 5.80
2643 2820 3.181423 ACAAAATCCTTACAAGAGCCCCA 60.181 43.478 0.00 0.00 0.00 4.96
2644 2821 3.825908 AAATCCTTACAAGAGCCCCAA 57.174 42.857 0.00 0.00 0.00 4.12
2645 2822 3.825908 AATCCTTACAAGAGCCCCAAA 57.174 42.857 0.00 0.00 0.00 3.28
2646 2823 3.825908 ATCCTTACAAGAGCCCCAAAA 57.174 42.857 0.00 0.00 0.00 2.44
2647 2824 3.825908 TCCTTACAAGAGCCCCAAAAT 57.174 42.857 0.00 0.00 0.00 1.82
2648 2825 3.430453 TCCTTACAAGAGCCCCAAAATG 58.570 45.455 0.00 0.00 0.00 2.32
2649 2826 3.075283 TCCTTACAAGAGCCCCAAAATGA 59.925 43.478 0.00 0.00 0.00 2.57
2650 2827 4.026052 CCTTACAAGAGCCCCAAAATGAT 58.974 43.478 0.00 0.00 0.00 2.45
2651 2828 4.098501 CCTTACAAGAGCCCCAAAATGATC 59.901 45.833 0.00 0.00 0.00 2.92
2652 2829 2.460669 ACAAGAGCCCCAAAATGATCC 58.539 47.619 0.00 0.00 0.00 3.36
2653 2830 2.043526 ACAAGAGCCCCAAAATGATCCT 59.956 45.455 0.00 0.00 0.00 3.24
2654 2831 3.102204 CAAGAGCCCCAAAATGATCCTT 58.898 45.455 0.00 0.00 0.00 3.36
2655 2832 4.264352 ACAAGAGCCCCAAAATGATCCTTA 60.264 41.667 0.00 0.00 0.00 2.69
2656 2833 3.903467 AGAGCCCCAAAATGATCCTTAC 58.097 45.455 0.00 0.00 0.00 2.34
2657 2834 2.618709 GAGCCCCAAAATGATCCTTACG 59.381 50.000 0.00 0.00 0.00 3.18
2658 2835 1.681264 GCCCCAAAATGATCCTTACGG 59.319 52.381 0.00 0.00 0.00 4.02
2659 2836 2.306847 CCCCAAAATGATCCTTACGGG 58.693 52.381 9.30 9.30 0.00 5.28
2667 2844 2.123180 TCCTTACGGGAGCCCCAA 59.877 61.111 10.47 0.00 45.83 4.12
2668 2845 1.539372 TCCTTACGGGAGCCCCAAA 60.539 57.895 10.47 3.72 45.83 3.28
2669 2846 1.077716 CCTTACGGGAGCCCCAAAG 60.078 63.158 10.47 11.40 45.83 2.77
2670 2847 1.077716 CTTACGGGAGCCCCAAAGG 60.078 63.158 10.47 0.00 45.83 3.11
2671 2848 1.539372 TTACGGGAGCCCCAAAGGA 60.539 57.895 10.47 0.00 45.83 3.36
2672 2849 0.917333 TTACGGGAGCCCCAAAGGAT 60.917 55.000 10.47 0.00 45.83 3.24
2673 2850 0.030909 TACGGGAGCCCCAAAGGATA 60.031 55.000 10.47 0.00 45.83 2.59
2674 2851 0.917333 ACGGGAGCCCCAAAGGATAA 60.917 55.000 10.47 0.00 45.83 1.75
2675 2852 0.465642 CGGGAGCCCCAAAGGATAAC 60.466 60.000 10.47 0.00 45.83 1.89
2676 2853 0.106167 GGGAGCCCCAAAGGATAACC 60.106 60.000 5.45 0.00 44.65 2.85
2677 2854 0.465642 GGAGCCCCAAAGGATAACCG 60.466 60.000 0.00 0.00 41.83 4.44
2678 2855 0.255033 GAGCCCCAAAGGATAACCGT 59.745 55.000 0.00 0.00 41.83 4.83
2679 2856 0.702316 AGCCCCAAAGGATAACCGTT 59.298 50.000 0.00 0.00 41.83 4.44
2693 2870 1.601166 ACCGTTGGTTAGTTGCTTCC 58.399 50.000 0.00 0.00 27.29 3.46
2694 2871 0.879090 CCGTTGGTTAGTTGCTTCCC 59.121 55.000 0.00 0.00 0.00 3.97
2695 2872 1.544759 CCGTTGGTTAGTTGCTTCCCT 60.545 52.381 0.00 0.00 0.00 4.20
2696 2873 2.289819 CCGTTGGTTAGTTGCTTCCCTA 60.290 50.000 0.00 0.00 0.00 3.53
2697 2874 3.404899 CGTTGGTTAGTTGCTTCCCTAA 58.595 45.455 0.00 0.00 0.00 2.69
2698 2875 3.816523 CGTTGGTTAGTTGCTTCCCTAAA 59.183 43.478 0.00 0.00 0.00 1.85
2699 2876 4.319984 CGTTGGTTAGTTGCTTCCCTAAAC 60.320 45.833 0.00 0.00 32.62 2.01
2700 2877 3.404899 TGGTTAGTTGCTTCCCTAAACG 58.595 45.455 0.00 0.00 34.31 3.60
2701 2878 3.071312 TGGTTAGTTGCTTCCCTAAACGA 59.929 43.478 0.00 0.00 34.31 3.85
2702 2879 3.434641 GGTTAGTTGCTTCCCTAAACGAC 59.565 47.826 0.00 0.00 0.00 4.34
2703 2880 2.922740 AGTTGCTTCCCTAAACGACA 57.077 45.000 0.00 0.00 0.00 4.35
2704 2881 3.202829 AGTTGCTTCCCTAAACGACAA 57.797 42.857 0.00 0.00 0.00 3.18
2705 2882 2.876550 AGTTGCTTCCCTAAACGACAAC 59.123 45.455 0.00 0.00 36.93 3.32
2706 2883 2.614983 GTTGCTTCCCTAAACGACAACA 59.385 45.455 0.00 0.00 36.73 3.33
2707 2884 2.920524 TGCTTCCCTAAACGACAACAA 58.079 42.857 0.00 0.00 0.00 2.83
2708 2885 2.614983 TGCTTCCCTAAACGACAACAAC 59.385 45.455 0.00 0.00 0.00 3.32
2709 2886 2.614983 GCTTCCCTAAACGACAACAACA 59.385 45.455 0.00 0.00 0.00 3.33
2710 2887 3.065648 GCTTCCCTAAACGACAACAACAA 59.934 43.478 0.00 0.00 0.00 2.83
2711 2888 4.439016 GCTTCCCTAAACGACAACAACAAA 60.439 41.667 0.00 0.00 0.00 2.83
2712 2889 4.886247 TCCCTAAACGACAACAACAAAG 57.114 40.909 0.00 0.00 0.00 2.77
2713 2890 4.515361 TCCCTAAACGACAACAACAAAGA 58.485 39.130 0.00 0.00 0.00 2.52
2714 2891 5.127491 TCCCTAAACGACAACAACAAAGAT 58.873 37.500 0.00 0.00 0.00 2.40
2715 2892 5.591067 TCCCTAAACGACAACAACAAAGATT 59.409 36.000 0.00 0.00 0.00 2.40
2716 2893 6.766944 TCCCTAAACGACAACAACAAAGATTA 59.233 34.615 0.00 0.00 0.00 1.75
2717 2894 6.854381 CCCTAAACGACAACAACAAAGATTAC 59.146 38.462 0.00 0.00 0.00 1.89
2718 2895 7.411274 CCTAAACGACAACAACAAAGATTACA 58.589 34.615 0.00 0.00 0.00 2.41
2719 2896 7.911205 CCTAAACGACAACAACAAAGATTACAA 59.089 33.333 0.00 0.00 0.00 2.41
2720 2897 9.445786 CTAAACGACAACAACAAAGATTACAAT 57.554 29.630 0.00 0.00 0.00 2.71
2721 2898 7.908193 AACGACAACAACAAAGATTACAATC 57.092 32.000 0.00 0.00 35.64 2.67
2722 2899 7.022055 ACGACAACAACAAAGATTACAATCA 57.978 32.000 4.85 0.00 37.89 2.57
2723 2900 7.132213 ACGACAACAACAAAGATTACAATCAG 58.868 34.615 4.85 0.00 37.89 2.90
2724 2901 7.011950 ACGACAACAACAAAGATTACAATCAGA 59.988 33.333 4.85 0.00 37.89 3.27
2725 2902 8.017373 CGACAACAACAAAGATTACAATCAGAT 58.983 33.333 4.85 0.00 37.89 2.90
2726 2903 9.334693 GACAACAACAAAGATTACAATCAGATC 57.665 33.333 4.85 0.00 37.89 2.75
2727 2904 8.299570 ACAACAACAAAGATTACAATCAGATCC 58.700 33.333 4.85 0.00 37.89 3.36
2728 2905 8.298854 CAACAACAAAGATTACAATCAGATCCA 58.701 33.333 4.85 0.00 37.89 3.41
2729 2906 7.820648 ACAACAAAGATTACAATCAGATCCAC 58.179 34.615 4.85 0.00 37.89 4.02
2730 2907 6.668541 ACAAAGATTACAATCAGATCCACG 57.331 37.500 4.85 0.00 37.89 4.94
2731 2908 5.065218 ACAAAGATTACAATCAGATCCACGC 59.935 40.000 4.85 0.00 37.89 5.34
2732 2909 4.406648 AGATTACAATCAGATCCACGCA 57.593 40.909 4.85 0.00 37.89 5.24
2733 2910 4.965814 AGATTACAATCAGATCCACGCAT 58.034 39.130 4.85 0.00 37.89 4.73
2734 2911 4.993584 AGATTACAATCAGATCCACGCATC 59.006 41.667 4.85 0.00 37.89 3.91
2735 2912 1.575244 ACAATCAGATCCACGCATCG 58.425 50.000 0.00 0.00 0.00 3.84
2736 2913 0.234106 CAATCAGATCCACGCATCGC 59.766 55.000 0.00 0.00 0.00 4.58
2765 2942 2.105006 GCATATGGCCATCATCGTCT 57.895 50.000 24.80 0.00 37.30 4.18
2766 2943 2.005451 GCATATGGCCATCATCGTCTC 58.995 52.381 24.80 0.21 37.30 3.36
2767 2944 2.354503 GCATATGGCCATCATCGTCTCT 60.355 50.000 24.80 0.00 37.30 3.10
2768 2945 3.519579 CATATGGCCATCATCGTCTCTC 58.480 50.000 24.80 0.00 37.30 3.20
2769 2946 0.683973 ATGGCCATCATCGTCTCTCC 59.316 55.000 14.09 0.00 0.00 3.71
2770 2947 0.397675 TGGCCATCATCGTCTCTCCT 60.398 55.000 0.00 0.00 0.00 3.69
2771 2948 0.755686 GGCCATCATCGTCTCTCCTT 59.244 55.000 0.00 0.00 0.00 3.36
2772 2949 1.139853 GGCCATCATCGTCTCTCCTTT 59.860 52.381 0.00 0.00 0.00 3.11
2773 2950 2.208431 GCCATCATCGTCTCTCCTTTG 58.792 52.381 0.00 0.00 0.00 2.77
2774 2951 2.208431 CCATCATCGTCTCTCCTTTGC 58.792 52.381 0.00 0.00 0.00 3.68
2775 2952 2.158986 CCATCATCGTCTCTCCTTTGCT 60.159 50.000 0.00 0.00 0.00 3.91
2776 2953 2.949451 TCATCGTCTCTCCTTTGCTC 57.051 50.000 0.00 0.00 0.00 4.26
2777 2954 2.451490 TCATCGTCTCTCCTTTGCTCT 58.549 47.619 0.00 0.00 0.00 4.09
2778 2955 2.425312 TCATCGTCTCTCCTTTGCTCTC 59.575 50.000 0.00 0.00 0.00 3.20
2779 2956 0.805614 TCGTCTCTCCTTTGCTCTCG 59.194 55.000 0.00 0.00 0.00 4.04
2780 2957 0.805614 CGTCTCTCCTTTGCTCTCGA 59.194 55.000 0.00 0.00 0.00 4.04
2781 2958 1.202132 CGTCTCTCCTTTGCTCTCGAG 60.202 57.143 5.93 5.93 0.00 4.04
2791 2968 4.701663 CTCTCGAGCTGGGCAAAA 57.298 55.556 7.81 0.00 0.00 2.44
2792 2969 2.166270 CTCTCGAGCTGGGCAAAAC 58.834 57.895 7.81 0.00 0.00 2.43
2793 2970 1.301677 CTCTCGAGCTGGGCAAAACC 61.302 60.000 7.81 0.00 37.93 3.27
2794 2971 1.302832 CTCGAGCTGGGCAAAACCT 60.303 57.895 0.00 0.00 39.10 3.50
2795 2972 1.580845 CTCGAGCTGGGCAAAACCTG 61.581 60.000 0.00 0.00 39.10 4.00
2796 2973 1.898574 CGAGCTGGGCAAAACCTGT 60.899 57.895 0.00 0.00 39.10 4.00
2797 2974 1.856265 CGAGCTGGGCAAAACCTGTC 61.856 60.000 0.00 0.00 39.10 3.51
2798 2975 0.538287 GAGCTGGGCAAAACCTGTCT 60.538 55.000 0.00 0.00 39.10 3.41
2799 2976 0.106015 AGCTGGGCAAAACCTGTCTT 60.106 50.000 0.00 0.00 39.10 3.01
2800 2977 0.752658 GCTGGGCAAAACCTGTCTTT 59.247 50.000 0.00 0.00 39.10 2.52
2801 2978 1.138859 GCTGGGCAAAACCTGTCTTTT 59.861 47.619 0.00 0.00 39.10 2.27
2802 2979 2.419990 GCTGGGCAAAACCTGTCTTTTT 60.420 45.455 0.00 0.00 39.10 1.94
2828 3005 9.872757 TTTTTAAACATAAATGTCAGAGACGTC 57.127 29.630 7.70 7.70 40.80 4.34
2829 3006 7.591006 TTAAACATAAATGTCAGAGACGTCC 57.409 36.000 13.01 3.77 40.80 4.79
2830 3007 3.770666 ACATAAATGTCAGAGACGTCCG 58.229 45.455 13.01 0.94 35.87 4.79
2831 3008 2.933495 TAAATGTCAGAGACGTCCGG 57.067 50.000 13.01 0.00 34.95 5.14
2832 3009 0.389948 AAATGTCAGAGACGTCCGGC 60.390 55.000 13.01 3.20 34.95 6.13
2833 3010 1.251527 AATGTCAGAGACGTCCGGCT 61.252 55.000 13.01 4.56 34.95 5.52
2834 3011 1.251527 ATGTCAGAGACGTCCGGCTT 61.252 55.000 13.01 0.00 34.95 4.35
2835 3012 1.289380 GTCAGAGACGTCCGGCTTT 59.711 57.895 13.01 0.00 30.74 3.51
2836 3013 0.524862 GTCAGAGACGTCCGGCTTTA 59.475 55.000 13.01 0.00 30.74 1.85
2837 3014 1.068055 GTCAGAGACGTCCGGCTTTAA 60.068 52.381 13.01 0.00 30.74 1.52
2838 3015 1.614903 TCAGAGACGTCCGGCTTTAAA 59.385 47.619 13.01 0.00 30.74 1.52
2839 3016 2.232941 TCAGAGACGTCCGGCTTTAAAT 59.767 45.455 13.01 0.00 30.74 1.40
2840 3017 3.000727 CAGAGACGTCCGGCTTTAAATT 58.999 45.455 13.01 0.00 30.74 1.82
2841 3018 4.082081 TCAGAGACGTCCGGCTTTAAATTA 60.082 41.667 13.01 0.00 30.74 1.40
2842 3019 4.628333 CAGAGACGTCCGGCTTTAAATTAA 59.372 41.667 13.01 0.00 30.74 1.40
2843 3020 5.293569 CAGAGACGTCCGGCTTTAAATTAAT 59.706 40.000 13.01 0.00 30.74 1.40
2844 3021 6.477688 CAGAGACGTCCGGCTTTAAATTAATA 59.522 38.462 13.01 0.00 30.74 0.98
2845 3022 7.010738 CAGAGACGTCCGGCTTTAAATTAATAA 59.989 37.037 13.01 0.00 30.74 1.40
2846 3023 7.550196 AGAGACGTCCGGCTTTAAATTAATAAA 59.450 33.333 13.01 0.00 30.74 1.40
2847 3024 7.691158 AGACGTCCGGCTTTAAATTAATAAAG 58.309 34.615 13.01 6.41 42.93 1.85
2862 3039 9.613428 AAATTAATAAAGCCCTCAAAAATAGGC 57.387 29.630 0.00 0.00 46.13 3.93
2866 3043 0.101219 GCCCTCAAAAATAGGCAGCG 59.899 55.000 0.00 0.00 45.07 5.18
2867 3044 1.463674 CCCTCAAAAATAGGCAGCGT 58.536 50.000 0.00 0.00 32.34 5.07
2868 3045 1.133025 CCCTCAAAAATAGGCAGCGTG 59.867 52.381 0.00 0.00 32.34 5.34
2869 3046 1.468054 CCTCAAAAATAGGCAGCGTGC 60.468 52.381 0.00 1.92 44.08 5.34
2878 3055 3.812203 GCAGCGTGCATACATGGA 58.188 55.556 0.00 0.00 44.26 3.41
2879 3056 2.097444 GCAGCGTGCATACATGGAA 58.903 52.632 0.00 0.00 44.26 3.53
2880 3057 0.248215 GCAGCGTGCATACATGGAAC 60.248 55.000 0.00 0.00 44.26 3.62
2881 3058 2.871012 GCAGCGTGCATACATGGAACA 61.871 52.381 0.00 0.00 44.26 3.18
2882 3059 4.329662 GCAGCGTGCATACATGGAACAA 62.330 50.000 0.00 0.00 43.37 2.83
2897 3074 3.500680 TGGAACAAGATCAACTAAACGGC 59.499 43.478 0.00 0.00 31.92 5.68
2898 3075 3.500680 GGAACAAGATCAACTAAACGGCA 59.499 43.478 0.00 0.00 0.00 5.69
2899 3076 4.023536 GGAACAAGATCAACTAAACGGCAA 60.024 41.667 0.00 0.00 0.00 4.52
2900 3077 4.483476 ACAAGATCAACTAAACGGCAAC 57.517 40.909 0.00 0.00 0.00 4.17
2901 3078 3.252458 ACAAGATCAACTAAACGGCAACC 59.748 43.478 0.00 0.00 0.00 3.77
2913 3090 2.768834 GGCAACCGAAGCTAGGAAG 58.231 57.895 14.34 7.47 0.00 3.46
2924 3101 2.094762 GCTAGGAAGCCAAGTTTCGA 57.905 50.000 0.00 0.00 43.40 3.71
2925 3102 2.423577 GCTAGGAAGCCAAGTTTCGAA 58.576 47.619 0.00 0.00 43.40 3.71
2926 3103 2.416893 GCTAGGAAGCCAAGTTTCGAAG 59.583 50.000 0.00 0.00 43.40 3.79
2927 3104 2.930826 AGGAAGCCAAGTTTCGAAGA 57.069 45.000 0.00 0.00 0.00 2.87
2928 3105 3.208747 AGGAAGCCAAGTTTCGAAGAA 57.791 42.857 0.00 0.00 45.90 2.52
2929 3106 3.551846 AGGAAGCCAAGTTTCGAAGAAA 58.448 40.909 0.00 0.00 45.90 2.52
2930 3107 3.565902 AGGAAGCCAAGTTTCGAAGAAAG 59.434 43.478 0.00 0.00 45.90 2.62
2931 3108 3.300857 GAAGCCAAGTTTCGAAGAAAGC 58.699 45.455 0.00 0.00 45.90 3.51
2932 3109 1.609072 AGCCAAGTTTCGAAGAAAGCC 59.391 47.619 0.00 0.00 45.90 4.35
2933 3110 1.336755 GCCAAGTTTCGAAGAAAGCCA 59.663 47.619 0.00 0.00 45.90 4.75
2934 3111 2.223711 GCCAAGTTTCGAAGAAAGCCAA 60.224 45.455 0.00 0.00 45.90 4.52
2935 3112 3.736740 GCCAAGTTTCGAAGAAAGCCAAA 60.737 43.478 0.00 0.00 45.90 3.28
2936 3113 4.429108 CCAAGTTTCGAAGAAAGCCAAAA 58.571 39.130 0.00 0.00 45.90 2.44
2937 3114 4.504097 CCAAGTTTCGAAGAAAGCCAAAAG 59.496 41.667 0.00 0.00 45.90 2.27
2938 3115 4.307443 AGTTTCGAAGAAAGCCAAAAGG 57.693 40.909 0.00 0.00 45.90 3.11
2939 3116 2.793278 TTCGAAGAAAGCCAAAAGGC 57.207 45.000 0.00 0.00 45.90 4.35
2940 3117 0.591170 TCGAAGAAAGCCAAAAGGCG 59.409 50.000 0.19 0.00 40.23 5.52
2941 3118 0.591170 CGAAGAAAGCCAAAAGGCGA 59.409 50.000 0.19 0.00 40.23 5.54
2942 3119 1.400242 CGAAGAAAGCCAAAAGGCGAG 60.400 52.381 0.19 0.00 40.23 5.03
2943 3120 1.880027 GAAGAAAGCCAAAAGGCGAGA 59.120 47.619 0.19 0.00 40.23 4.04
2944 3121 1.528129 AGAAAGCCAAAAGGCGAGAG 58.472 50.000 0.19 0.00 40.23 3.20
2957 3134 3.171705 CGAGAGCGGAGATAAGTGC 57.828 57.895 0.00 0.00 0.00 4.40
2958 3135 0.382158 CGAGAGCGGAGATAAGTGCA 59.618 55.000 0.00 0.00 0.00 4.57
2959 3136 1.000827 CGAGAGCGGAGATAAGTGCAT 60.001 52.381 0.00 0.00 0.00 3.96
2960 3137 2.544694 CGAGAGCGGAGATAAGTGCATT 60.545 50.000 0.00 0.00 0.00 3.56
2961 3138 3.304726 CGAGAGCGGAGATAAGTGCATTA 60.305 47.826 0.00 0.00 0.00 1.90
2962 3139 3.983741 AGAGCGGAGATAAGTGCATTAC 58.016 45.455 0.00 0.00 0.00 1.89
2963 3140 3.384789 AGAGCGGAGATAAGTGCATTACA 59.615 43.478 0.00 0.00 0.00 2.41
2964 3141 4.039730 AGAGCGGAGATAAGTGCATTACAT 59.960 41.667 0.00 0.00 0.00 2.29
2965 3142 4.060900 AGCGGAGATAAGTGCATTACATG 58.939 43.478 0.00 0.00 0.00 3.21
2966 3143 3.187227 GCGGAGATAAGTGCATTACATGG 59.813 47.826 0.00 0.00 0.00 3.66
2967 3144 3.187227 CGGAGATAAGTGCATTACATGGC 59.813 47.826 0.00 0.00 0.00 4.40
2968 3145 3.503748 GGAGATAAGTGCATTACATGGCC 59.496 47.826 0.00 0.00 0.00 5.36
2969 3146 4.392940 GAGATAAGTGCATTACATGGCCT 58.607 43.478 3.32 0.00 0.00 5.19
2970 3147 5.513094 GGAGATAAGTGCATTACATGGCCTA 60.513 44.000 3.32 0.00 0.00 3.93
2971 3148 5.555017 AGATAAGTGCATTACATGGCCTAG 58.445 41.667 3.32 0.00 0.00 3.02
2972 3149 1.972872 AGTGCATTACATGGCCTAGC 58.027 50.000 3.32 0.00 0.00 3.42
2973 3150 1.492176 AGTGCATTACATGGCCTAGCT 59.508 47.619 3.32 0.00 0.00 3.32
2974 3151 2.705658 AGTGCATTACATGGCCTAGCTA 59.294 45.455 3.32 0.00 0.00 3.32
2975 3152 3.070018 GTGCATTACATGGCCTAGCTAG 58.930 50.000 14.20 14.20 0.00 3.42
2976 3153 2.079925 GCATTACATGGCCTAGCTAGC 58.920 52.381 15.74 6.62 0.00 3.42
2986 3163 2.678324 GCCTAGCTAGCCAGAATAACG 58.322 52.381 15.74 0.00 0.00 3.18
2987 3164 2.296471 GCCTAGCTAGCCAGAATAACGA 59.704 50.000 15.74 0.00 0.00 3.85
2988 3165 3.612955 GCCTAGCTAGCCAGAATAACGAG 60.613 52.174 15.74 0.00 0.00 4.18
2989 3166 2.517650 AGCTAGCCAGAATAACGAGC 57.482 50.000 12.13 0.00 0.00 5.03
2990 3167 1.757118 AGCTAGCCAGAATAACGAGCA 59.243 47.619 12.13 0.00 0.00 4.26
2991 3168 1.861575 GCTAGCCAGAATAACGAGCAC 59.138 52.381 2.29 0.00 0.00 4.40
2992 3169 2.120232 CTAGCCAGAATAACGAGCACG 58.880 52.381 0.76 0.76 45.75 5.34
2993 3170 1.084370 AGCCAGAATAACGAGCACGC 61.084 55.000 2.62 0.00 43.96 5.34
2994 3171 1.358725 GCCAGAATAACGAGCACGCA 61.359 55.000 2.62 0.00 43.96 5.24
2995 3172 0.647410 CCAGAATAACGAGCACGCAG 59.353 55.000 2.62 0.00 43.96 5.18
2996 3173 0.647410 CAGAATAACGAGCACGCAGG 59.353 55.000 2.62 0.00 43.96 4.85
2997 3174 1.084370 AGAATAACGAGCACGCAGGC 61.084 55.000 2.62 0.00 43.96 4.85
3004 3181 2.111878 AGCACGCAGGCTCAAAGT 59.888 55.556 0.00 0.00 41.05 2.66
3005 3182 1.371183 AGCACGCAGGCTCAAAGTA 59.629 52.632 0.00 0.00 41.05 2.24
3006 3183 0.671781 AGCACGCAGGCTCAAAGTAG 60.672 55.000 0.00 0.00 41.05 2.57
3007 3184 1.790387 CACGCAGGCTCAAAGTAGC 59.210 57.895 0.00 0.00 41.99 3.58
3008 3185 3.084579 CGCAGGCTCAAAGTAGCG 58.915 61.111 0.00 0.00 43.74 4.26
3009 3186 2.456119 CGCAGGCTCAAAGTAGCGG 61.456 63.158 5.35 0.00 43.74 5.52
3010 3187 2.109126 GCAGGCTCAAAGTAGCGGG 61.109 63.158 0.00 0.00 43.74 6.13
3011 3188 1.596934 CAGGCTCAAAGTAGCGGGA 59.403 57.895 0.00 0.00 43.74 5.14
3012 3189 0.741221 CAGGCTCAAAGTAGCGGGAC 60.741 60.000 0.00 0.00 43.74 4.46
3013 3190 1.449778 GGCTCAAAGTAGCGGGACC 60.450 63.158 0.00 0.00 43.74 4.46
3014 3191 1.295423 GCTCAAAGTAGCGGGACCA 59.705 57.895 0.00 0.00 31.76 4.02
3015 3192 0.321298 GCTCAAAGTAGCGGGACCAA 60.321 55.000 0.00 0.00 31.76 3.67
3016 3193 1.880646 GCTCAAAGTAGCGGGACCAAA 60.881 52.381 0.00 0.00 31.76 3.28
3017 3194 2.500229 CTCAAAGTAGCGGGACCAAAA 58.500 47.619 0.00 0.00 0.00 2.44
3018 3195 2.484264 CTCAAAGTAGCGGGACCAAAAG 59.516 50.000 0.00 0.00 0.00 2.27
3019 3196 1.539827 CAAAGTAGCGGGACCAAAAGG 59.460 52.381 0.00 0.00 0.00 3.11
3020 3197 1.061546 AAGTAGCGGGACCAAAAGGA 58.938 50.000 0.00 0.00 0.00 3.36
3021 3198 0.323957 AGTAGCGGGACCAAAAGGAC 59.676 55.000 0.00 0.00 0.00 3.85
3022 3199 0.675837 GTAGCGGGACCAAAAGGACC 60.676 60.000 0.00 0.00 0.00 4.46
3023 3200 1.128809 TAGCGGGACCAAAAGGACCA 61.129 55.000 5.46 0.00 0.00 4.02
3024 3201 2.265904 GCGGGACCAAAAGGACCAC 61.266 63.158 5.46 0.00 0.00 4.16
3025 3202 1.602605 CGGGACCAAAAGGACCACC 60.603 63.158 5.46 0.00 0.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 6.649155 AGCTTTTGTTTTATTTGTGTCCCTT 58.351 32.000 0.00 0.00 0.00 3.95
59 60 5.478407 CCATCCGGAGCTTTTGTTTTATTT 58.522 37.500 11.34 0.00 0.00 1.40
62 63 2.823154 CCCATCCGGAGCTTTTGTTTTA 59.177 45.455 11.34 0.00 0.00 1.52
68 69 2.497273 CAAAATCCCATCCGGAGCTTTT 59.503 45.455 11.34 8.18 46.60 2.27
70 71 1.686115 CCAAAATCCCATCCGGAGCTT 60.686 52.381 11.34 0.00 46.60 3.74
72 73 1.109323 CCCAAAATCCCATCCGGAGC 61.109 60.000 11.34 0.00 46.60 4.70
77 78 1.337384 GCCCACCCAAAATCCCATCC 61.337 60.000 0.00 0.00 0.00 3.51
78 79 1.337384 GGCCCACCCAAAATCCCATC 61.337 60.000 0.00 0.00 0.00 3.51
89 90 2.671963 GACAACTTCGGCCCACCC 60.672 66.667 0.00 0.00 0.00 4.61
94 95 3.071479 TCAAACTATGACAACTTCGGCC 58.929 45.455 0.00 0.00 31.50 6.13
121 122 2.607750 GGAGGGTCTGGCTGTCCA 60.608 66.667 9.57 0.00 40.85 4.02
122 123 3.403558 GGGAGGGTCTGGCTGTCC 61.404 72.222 0.00 0.00 0.00 4.02
123 124 1.779061 TTTGGGAGGGTCTGGCTGTC 61.779 60.000 0.00 0.00 0.00 3.51
126 127 2.911926 GCTTTGGGAGGGTCTGGCT 61.912 63.158 0.00 0.00 0.00 4.75
127 128 2.361737 GCTTTGGGAGGGTCTGGC 60.362 66.667 0.00 0.00 0.00 4.85
128 129 1.301293 GAGCTTTGGGAGGGTCTGG 59.699 63.158 0.00 0.00 0.00 3.86
131 132 2.269241 CGGAGCTTTGGGAGGGTC 59.731 66.667 0.00 0.00 0.00 4.46
137 138 1.574428 CAAACGACGGAGCTTTGGG 59.426 57.895 0.00 0.00 0.00 4.12
147 148 1.666700 TCAACAGAAACCCAAACGACG 59.333 47.619 0.00 0.00 0.00 5.12
162 163 1.600023 ACGCCCGAATTTCTTCAACA 58.400 45.000 0.00 0.00 0.00 3.33
178 179 1.153901 TCTGGACCGATTCGAACGC 60.154 57.895 7.83 0.00 0.00 4.84
185 186 7.827236 TGAAGTATAAAAATGTCTGGACCGATT 59.173 33.333 0.00 0.00 0.00 3.34
187 188 6.592607 GTGAAGTATAAAAATGTCTGGACCGA 59.407 38.462 0.00 0.00 0.00 4.69
194 195 7.972832 TCCAACGTGAAGTATAAAAATGTCT 57.027 32.000 0.00 0.00 0.00 3.41
213 214 5.008316 GGTCCGGACAATTTATACATCCAAC 59.992 44.000 34.40 8.28 0.00 3.77
214 215 5.127491 GGTCCGGACAATTTATACATCCAA 58.873 41.667 34.40 0.00 0.00 3.53
217 218 5.008316 GGTTGGTCCGGACAATTTATACATC 59.992 44.000 34.40 18.29 0.00 3.06
218 219 4.885325 GGTTGGTCCGGACAATTTATACAT 59.115 41.667 34.40 0.00 0.00 2.29
240 241 5.977171 TCACGTGTAAATATTTGGATCGG 57.023 39.130 16.51 5.47 0.00 4.18
244 245 8.735315 ACATCAAATCACGTGTAAATATTTGGA 58.265 29.630 26.40 18.36 37.85 3.53
270 271 0.599991 ACATCGAGCGCAACACTGAA 60.600 50.000 11.47 0.00 0.00 3.02
274 275 2.806288 ATAAACATCGAGCGCAACAC 57.194 45.000 11.47 0.00 0.00 3.32
280 281 8.858003 AGATTATACCATATAAACATCGAGCG 57.142 34.615 0.00 0.00 0.00 5.03
309 310 5.049267 GGCTAATACGGTGAAAGTGAAACAA 60.049 40.000 0.00 0.00 41.43 2.83
357 358 1.135888 CGACGACACATGAAGTACGGA 60.136 52.381 0.00 0.00 34.88 4.69
358 359 1.135888 TCGACGACACATGAAGTACGG 60.136 52.381 0.00 0.00 34.88 4.02
359 360 2.166799 CTCGACGACACATGAAGTACG 58.833 52.381 0.00 6.55 36.04 3.67
360 361 3.162068 GACTCGACGACACATGAAGTAC 58.838 50.000 0.00 0.00 0.00 2.73
361 362 2.809696 TGACTCGACGACACATGAAGTA 59.190 45.455 0.00 0.00 0.00 2.24
362 363 1.607148 TGACTCGACGACACATGAAGT 59.393 47.619 0.00 0.00 0.00 3.01
363 364 2.331809 TGACTCGACGACACATGAAG 57.668 50.000 0.00 0.00 0.00 3.02
364 365 2.595386 CATGACTCGACGACACATGAA 58.405 47.619 23.53 0.67 40.13 2.57
365 366 1.135402 CCATGACTCGACGACACATGA 60.135 52.381 26.81 0.00 40.13 3.07
366 367 1.135402 TCCATGACTCGACGACACATG 60.135 52.381 22.10 22.10 38.28 3.21
367 368 1.173913 TCCATGACTCGACGACACAT 58.826 50.000 0.00 0.00 0.00 3.21
456 463 4.226427 TCTCAGATTGATTCCACCCAAG 57.774 45.455 0.00 0.00 0.00 3.61
460 467 5.006386 ACAACTTCTCAGATTGATTCCACC 58.994 41.667 0.00 0.00 0.00 4.61
462 469 7.244886 TCTACAACTTCTCAGATTGATTCCA 57.755 36.000 0.00 0.00 0.00 3.53
463 470 8.729805 AATCTACAACTTCTCAGATTGATTCC 57.270 34.615 0.00 0.00 36.60 3.01
473 481 6.998074 ACCATTGTCAAATCTACAACTTCTCA 59.002 34.615 0.00 0.00 39.51 3.27
476 484 5.858581 GCACCATTGTCAAATCTACAACTTC 59.141 40.000 0.00 0.00 39.51 3.01
512 526 6.472163 GCGAACATCTTTGAAAAGTCTGAAAA 59.528 34.615 12.07 0.00 37.31 2.29
514 528 5.296780 AGCGAACATCTTTGAAAAGTCTGAA 59.703 36.000 12.07 0.00 37.31 3.02
525 539 1.927174 CCCTCGTAGCGAACATCTTTG 59.073 52.381 0.00 0.00 34.74 2.77
526 540 1.739371 GCCCTCGTAGCGAACATCTTT 60.739 52.381 0.00 0.00 34.74 2.52
537 551 2.028190 CCGCAGATGCCCTCGTAG 59.972 66.667 0.00 0.00 37.91 3.51
543 557 0.177141 TAGTGTAACCGCAGATGCCC 59.823 55.000 0.00 0.00 37.80 5.36
544 558 1.287425 GTAGTGTAACCGCAGATGCC 58.713 55.000 0.00 0.00 37.80 4.40
545 559 0.921347 CGTAGTGTAACCGCAGATGC 59.079 55.000 0.00 0.00 37.80 3.91
546 560 2.451132 CTCGTAGTGTAACCGCAGATG 58.549 52.381 0.00 0.00 37.80 2.90
547 561 1.404391 CCTCGTAGTGTAACCGCAGAT 59.596 52.381 0.00 0.00 37.80 2.90
548 562 0.806868 CCTCGTAGTGTAACCGCAGA 59.193 55.000 0.00 0.00 37.80 4.26
549 563 0.801067 GCCTCGTAGTGTAACCGCAG 60.801 60.000 0.00 0.00 37.80 5.18
550 564 1.213537 GCCTCGTAGTGTAACCGCA 59.786 57.895 0.00 0.00 37.80 5.69
551 565 0.179119 ATGCCTCGTAGTGTAACCGC 60.179 55.000 0.00 0.00 37.80 5.68
552 566 1.404391 AGATGCCTCGTAGTGTAACCG 59.596 52.381 0.00 0.00 37.80 4.44
553 567 3.547613 CGTAGATGCCTCGTAGTGTAACC 60.548 52.174 0.00 0.00 37.80 2.85
554 568 3.547613 CCGTAGATGCCTCGTAGTGTAAC 60.548 52.174 0.00 0.00 0.00 2.50
555 569 2.615447 CCGTAGATGCCTCGTAGTGTAA 59.385 50.000 0.00 0.00 0.00 2.41
556 570 2.216046 CCGTAGATGCCTCGTAGTGTA 58.784 52.381 0.00 0.00 0.00 2.90
557 571 1.022735 CCGTAGATGCCTCGTAGTGT 58.977 55.000 0.00 0.00 0.00 3.55
558 572 1.022735 ACCGTAGATGCCTCGTAGTG 58.977 55.000 0.00 0.00 0.00 2.74
559 573 1.760192 AACCGTAGATGCCTCGTAGT 58.240 50.000 0.00 0.00 0.00 2.73
560 574 2.877168 AGTAACCGTAGATGCCTCGTAG 59.123 50.000 0.00 0.00 0.00 3.51
561 575 2.923121 AGTAACCGTAGATGCCTCGTA 58.077 47.619 0.00 0.00 0.00 3.43
562 576 1.760192 AGTAACCGTAGATGCCTCGT 58.240 50.000 0.00 0.00 0.00 4.18
563 577 2.098607 TGAAGTAACCGTAGATGCCTCG 59.901 50.000 0.00 0.00 0.00 4.63
564 578 3.795623 TGAAGTAACCGTAGATGCCTC 57.204 47.619 0.00 0.00 0.00 4.70
565 579 3.704566 TGATGAAGTAACCGTAGATGCCT 59.295 43.478 0.00 0.00 0.00 4.75
566 580 4.054780 TGATGAAGTAACCGTAGATGCC 57.945 45.455 0.00 0.00 0.00 4.40
567 581 6.604735 AATTGATGAAGTAACCGTAGATGC 57.395 37.500 0.00 0.00 0.00 3.91
568 582 8.196802 TGAAATTGATGAAGTAACCGTAGATG 57.803 34.615 0.00 0.00 0.00 2.90
573 587 8.956426 ACATATTGAAATTGATGAAGTAACCGT 58.044 29.630 0.00 0.00 0.00 4.83
584 598 9.675464 ATTGGCTGAAAACATATTGAAATTGAT 57.325 25.926 0.00 0.00 0.00 2.57
595 609 9.474313 ACCTTTAAGATATTGGCTGAAAACATA 57.526 29.630 0.00 0.00 0.00 2.29
598 612 6.531594 GCACCTTTAAGATATTGGCTGAAAAC 59.468 38.462 0.00 0.00 0.00 2.43
600 614 5.951747 AGCACCTTTAAGATATTGGCTGAAA 59.048 36.000 0.00 0.00 0.00 2.69
601 615 5.509498 AGCACCTTTAAGATATTGGCTGAA 58.491 37.500 0.00 0.00 0.00 3.02
603 617 4.883585 TGAGCACCTTTAAGATATTGGCTG 59.116 41.667 0.00 0.00 0.00 4.85
604 618 5.116084 TGAGCACCTTTAAGATATTGGCT 57.884 39.130 0.00 0.00 0.00 4.75
605 619 7.362401 CCATATGAGCACCTTTAAGATATTGGC 60.362 40.741 3.65 0.00 0.00 4.52
606 620 7.121759 CCCATATGAGCACCTTTAAGATATTGG 59.878 40.741 3.65 0.00 0.00 3.16
615 631 5.904984 ATGTACCCATATGAGCACCTTTA 57.095 39.130 3.65 0.00 0.00 1.85
632 648 6.586463 CCGTACACTCATTCATCCATATGTAC 59.414 42.308 1.24 0.00 38.39 2.90
652 668 2.148365 GCTCACGTACACGCCGTAC 61.148 63.158 0.85 5.81 46.03 3.67
656 672 2.165301 GGATGCTCACGTACACGCC 61.165 63.158 0.85 0.00 44.43 5.68
665 681 0.387367 ATACGATCGCGGATGCTCAC 60.387 55.000 16.60 0.00 40.23 3.51
696 712 3.866327 CCGTTTTTCCGTTCACCAAATTT 59.134 39.130 0.00 0.00 0.00 1.82
698 714 2.223852 CCCGTTTTTCCGTTCACCAAAT 60.224 45.455 0.00 0.00 0.00 2.32
706 722 1.302366 GTCTGACCCGTTTTTCCGTT 58.698 50.000 0.00 0.00 0.00 4.44
707 723 0.877213 CGTCTGACCCGTTTTTCCGT 60.877 55.000 1.55 0.00 0.00 4.69
709 725 0.584876 CACGTCTGACCCGTTTTTCC 59.415 55.000 1.55 0.00 36.17 3.13
717 733 1.258445 ATCTGTCCCACGTCTGACCC 61.258 60.000 10.56 0.00 0.00 4.46
720 736 1.471119 GGTATCTGTCCCACGTCTGA 58.529 55.000 0.00 0.00 0.00 3.27
911 992 4.034858 GCTATGCGTGTACTGTAGACTGTA 59.965 45.833 12.51 6.81 0.00 2.74
912 993 3.181499 GCTATGCGTGTACTGTAGACTGT 60.181 47.826 12.51 0.00 0.00 3.55
913 994 3.065510 AGCTATGCGTGTACTGTAGACTG 59.934 47.826 12.51 7.73 0.00 3.51
914 995 3.280295 AGCTATGCGTGTACTGTAGACT 58.720 45.455 12.51 0.00 0.00 3.24
915 996 3.694535 AGCTATGCGTGTACTGTAGAC 57.305 47.619 5.11 5.11 0.00 2.59
916 997 3.733988 GCAAGCTATGCGTGTACTGTAGA 60.734 47.826 7.24 0.00 46.87 2.59
917 998 2.535984 GCAAGCTATGCGTGTACTGTAG 59.464 50.000 7.24 0.00 46.87 2.74
918 999 2.536365 GCAAGCTATGCGTGTACTGTA 58.464 47.619 7.24 0.00 46.87 2.74
919 1000 1.359848 GCAAGCTATGCGTGTACTGT 58.640 50.000 7.24 0.00 46.87 3.55
950 1033 3.596214 CCAAGCTAAGCTACGGAGAAAA 58.404 45.455 0.00 0.00 38.25 2.29
1041 1124 1.078848 CCAGTTCTTCTCCAGGCCG 60.079 63.158 0.00 0.00 0.00 6.13
1147 1230 7.145985 TCATACGATGGAGAAAATGTACTAGC 58.854 38.462 0.00 0.00 0.00 3.42
1150 1233 7.953158 CATCATACGATGGAGAAAATGTACT 57.047 36.000 0.00 0.00 44.59 2.73
1202 1288 1.135774 GTATCGCGCCGATCTGTCATA 60.136 52.381 16.03 0.00 43.45 2.15
1275 1361 5.989477 ACTTGTTCTAATGGCACTAGCATA 58.011 37.500 0.00 0.00 44.61 3.14
1344 1433 1.958288 ACAGAGTTAGCCCTCCACAT 58.042 50.000 0.00 0.00 31.53 3.21
1356 1445 2.031870 GCCAGGACCAAAAACAGAGTT 58.968 47.619 0.00 0.00 0.00 3.01
1376 1465 0.449388 GCCTGCAGAACCAAATCGAG 59.551 55.000 17.39 0.00 0.00 4.04
1378 1467 1.135315 CGCCTGCAGAACCAAATCG 59.865 57.895 17.39 0.00 0.00 3.34
1379 1468 0.449388 CTCGCCTGCAGAACCAAATC 59.551 55.000 17.39 0.00 0.00 2.17
1470 1562 2.491693 GCTCCGATGGTGAAAATTGGAA 59.508 45.455 0.00 0.00 37.19 3.53
1475 1567 4.339247 CCAATTAGCTCCGATGGTGAAAAT 59.661 41.667 0.00 0.00 0.00 1.82
1490 1582 4.739195 TGTAAATCAAACCGCCAATTAGC 58.261 39.130 0.00 0.00 0.00 3.09
1511 1603 7.030165 ACATACGTGAATCAGTCTAAACTCTG 58.970 38.462 0.00 0.00 31.71 3.35
1513 1605 7.813852 AACATACGTGAATCAGTCTAAACTC 57.186 36.000 0.00 0.00 31.71 3.01
1514 1606 7.331193 GGAAACATACGTGAATCAGTCTAAACT 59.669 37.037 0.00 0.00 35.60 2.66
1518 1612 6.525578 AGGAAACATACGTGAATCAGTCTA 57.474 37.500 0.00 0.00 0.00 2.59
1592 1688 2.764269 TGCTTCCTTACCATAGCCTCT 58.236 47.619 0.00 0.00 32.73 3.69
1598 1694 1.407712 GGGCGTTGCTTCCTTACCATA 60.408 52.381 0.00 0.00 0.00 2.74
1607 1703 0.040067 CAAGAAGTGGGCGTTGCTTC 60.040 55.000 0.00 0.00 38.97 3.86
1715 1824 0.113776 TACCCCACTGGAACGACTCT 59.886 55.000 0.00 0.00 38.00 3.24
2213 2382 0.249573 CCTAACACCACCAACGACGT 60.250 55.000 0.00 0.00 0.00 4.34
2246 2416 5.768980 TCCCATTGGCCAAATCATTTTTA 57.231 34.783 24.71 0.00 0.00 1.52
2251 2421 3.452878 TCTTTCCCATTGGCCAAATCAT 58.547 40.909 24.71 2.04 0.00 2.45
2254 2424 3.452878 TCATCTTTCCCATTGGCCAAAT 58.547 40.909 24.71 8.48 0.00 2.32
2275 2445 8.225603 TGCTCTTTGATAAAAGAAGAACACTT 57.774 30.769 6.70 0.00 38.23 3.16
2308 2478 1.403679 TGTGTGAAAAGTTTCGGCTGG 59.596 47.619 0.00 0.00 40.01 4.85
2311 2481 4.855531 ACTATTGTGTGAAAAGTTTCGGC 58.144 39.130 0.00 0.00 40.01 5.54
2316 2486 4.024048 CGGCTGACTATTGTGTGAAAAGTT 60.024 41.667 0.00 0.00 0.00 2.66
2328 2498 1.153429 GAACCGCCGGCTGACTATT 60.153 57.895 25.71 8.06 0.00 1.73
2406 2581 0.317799 TGACATGTTGTGCCCAATGC 59.682 50.000 0.00 0.00 41.77 3.56
2410 2585 0.106769 ACACTGACATGTTGTGCCCA 60.107 50.000 23.79 7.46 35.33 5.36
2425 2600 3.141398 AGACGAAATTGATGTGCACACT 58.859 40.909 24.37 11.67 0.00 3.55
2445 2620 6.182634 CGTACTAAAACACCGCATTTGATAG 58.817 40.000 0.00 0.00 0.00 2.08
2493 2668 5.984725 TCCGCTTTTCCTAGTCAATCAATA 58.015 37.500 0.00 0.00 0.00 1.90
2494 2669 4.843728 TCCGCTTTTCCTAGTCAATCAAT 58.156 39.130 0.00 0.00 0.00 2.57
2496 2671 3.973206 TCCGCTTTTCCTAGTCAATCA 57.027 42.857 0.00 0.00 0.00 2.57
2497 2672 5.622770 TTTTCCGCTTTTCCTAGTCAATC 57.377 39.130 0.00 0.00 0.00 2.67
2507 2682 7.013942 AGGGTATGGTATATTTTTCCGCTTTTC 59.986 37.037 0.00 0.00 0.00 2.29
2510 2685 5.948842 AGGGTATGGTATATTTTTCCGCTT 58.051 37.500 0.00 0.00 0.00 4.68
2608 2785 9.877178 TGTAAGGATTTTGTTGTTGTTGTAATT 57.123 25.926 0.00 0.00 0.00 1.40
2609 2786 9.877178 TTGTAAGGATTTTGTTGTTGTTGTAAT 57.123 25.926 0.00 0.00 0.00 1.89
2610 2787 9.360093 CTTGTAAGGATTTTGTTGTTGTTGTAA 57.640 29.630 0.00 0.00 0.00 2.41
2611 2788 8.740906 TCTTGTAAGGATTTTGTTGTTGTTGTA 58.259 29.630 0.00 0.00 0.00 2.41
2612 2789 7.607250 TCTTGTAAGGATTTTGTTGTTGTTGT 58.393 30.769 0.00 0.00 0.00 3.32
2613 2790 7.254084 GCTCTTGTAAGGATTTTGTTGTTGTTG 60.254 37.037 0.00 0.00 0.00 3.33
2614 2791 6.756542 GCTCTTGTAAGGATTTTGTTGTTGTT 59.243 34.615 0.00 0.00 0.00 2.83
2615 2792 6.273071 GCTCTTGTAAGGATTTTGTTGTTGT 58.727 36.000 0.00 0.00 0.00 3.32
2616 2793 5.691754 GGCTCTTGTAAGGATTTTGTTGTTG 59.308 40.000 0.00 0.00 0.00 3.33
2617 2794 5.221441 GGGCTCTTGTAAGGATTTTGTTGTT 60.221 40.000 0.00 0.00 0.00 2.83
2618 2795 4.280929 GGGCTCTTGTAAGGATTTTGTTGT 59.719 41.667 0.00 0.00 0.00 3.32
2619 2796 4.321974 GGGGCTCTTGTAAGGATTTTGTTG 60.322 45.833 0.00 0.00 0.00 3.33
2620 2797 3.832490 GGGGCTCTTGTAAGGATTTTGTT 59.168 43.478 0.00 0.00 0.00 2.83
2621 2798 3.181423 TGGGGCTCTTGTAAGGATTTTGT 60.181 43.478 0.00 0.00 0.00 2.83
2622 2799 3.430453 TGGGGCTCTTGTAAGGATTTTG 58.570 45.455 0.00 0.00 0.00 2.44
2623 2800 3.825908 TGGGGCTCTTGTAAGGATTTT 57.174 42.857 0.00 0.00 0.00 1.82
2624 2801 3.825908 TTGGGGCTCTTGTAAGGATTT 57.174 42.857 0.00 0.00 0.00 2.17
2625 2802 3.825908 TTTGGGGCTCTTGTAAGGATT 57.174 42.857 0.00 0.00 0.00 3.01
2626 2803 3.825908 TTTTGGGGCTCTTGTAAGGAT 57.174 42.857 0.00 0.00 0.00 3.24
2627 2804 3.075283 TCATTTTGGGGCTCTTGTAAGGA 59.925 43.478 0.00 0.00 0.00 3.36
2628 2805 3.430453 TCATTTTGGGGCTCTTGTAAGG 58.570 45.455 0.00 0.00 0.00 2.69
2629 2806 4.098501 GGATCATTTTGGGGCTCTTGTAAG 59.901 45.833 0.00 0.00 0.00 2.34
2630 2807 4.023291 GGATCATTTTGGGGCTCTTGTAA 58.977 43.478 0.00 0.00 0.00 2.41
2631 2808 3.269381 AGGATCATTTTGGGGCTCTTGTA 59.731 43.478 0.00 0.00 0.00 2.41
2632 2809 2.043526 AGGATCATTTTGGGGCTCTTGT 59.956 45.455 0.00 0.00 0.00 3.16
2633 2810 2.743553 AGGATCATTTTGGGGCTCTTG 58.256 47.619 0.00 0.00 0.00 3.02
2634 2811 3.479866 AAGGATCATTTTGGGGCTCTT 57.520 42.857 0.00 0.00 0.00 2.85
2635 2812 3.685550 CGTAAGGATCATTTTGGGGCTCT 60.686 47.826 0.00 0.00 0.00 4.09
2636 2813 2.618709 CGTAAGGATCATTTTGGGGCTC 59.381 50.000 0.00 0.00 0.00 4.70
2637 2814 2.654863 CGTAAGGATCATTTTGGGGCT 58.345 47.619 0.00 0.00 0.00 5.19
2657 2834 0.106167 GGTTATCCTTTGGGGCTCCC 60.106 60.000 0.00 0.72 45.71 4.30
2658 2835 0.465642 CGGTTATCCTTTGGGGCTCC 60.466 60.000 0.00 0.00 34.39 4.70
2659 2836 0.255033 ACGGTTATCCTTTGGGGCTC 59.745 55.000 0.00 0.00 34.39 4.70
2660 2837 0.702316 AACGGTTATCCTTTGGGGCT 59.298 50.000 0.00 0.00 34.39 5.19
2661 2838 0.815095 CAACGGTTATCCTTTGGGGC 59.185 55.000 0.00 0.00 38.70 5.80
2665 2842 5.695818 CAACTAACCAACGGTTATCCTTTG 58.304 41.667 6.09 2.73 45.58 2.77
2666 2843 4.216902 GCAACTAACCAACGGTTATCCTTT 59.783 41.667 6.09 0.00 45.58 3.11
2667 2844 3.754850 GCAACTAACCAACGGTTATCCTT 59.245 43.478 6.09 0.00 45.58 3.36
2668 2845 3.008704 AGCAACTAACCAACGGTTATCCT 59.991 43.478 6.09 0.00 45.58 3.24
2669 2846 3.340928 AGCAACTAACCAACGGTTATCC 58.659 45.455 6.09 0.00 45.58 2.59
2670 2847 4.142752 GGAAGCAACTAACCAACGGTTATC 60.143 45.833 6.09 0.75 45.58 1.75
2671 2848 3.754850 GGAAGCAACTAACCAACGGTTAT 59.245 43.478 6.09 0.00 45.58 1.89
2672 2849 3.140623 GGAAGCAACTAACCAACGGTTA 58.859 45.455 5.54 5.54 44.94 2.85
2674 2851 1.601166 GGAAGCAACTAACCAACGGT 58.399 50.000 0.00 0.00 37.65 4.83
2675 2852 0.879090 GGGAAGCAACTAACCAACGG 59.121 55.000 0.00 0.00 0.00 4.44
2676 2853 1.892209 AGGGAAGCAACTAACCAACG 58.108 50.000 0.00 0.00 0.00 4.10
2677 2854 4.319984 CGTTTAGGGAAGCAACTAACCAAC 60.320 45.833 0.00 0.00 0.00 3.77
2678 2855 3.816523 CGTTTAGGGAAGCAACTAACCAA 59.183 43.478 0.00 0.00 0.00 3.67
2679 2856 3.071312 TCGTTTAGGGAAGCAACTAACCA 59.929 43.478 0.00 0.00 0.00 3.67
2680 2857 3.434641 GTCGTTTAGGGAAGCAACTAACC 59.565 47.826 0.00 0.00 0.00 2.85
2681 2858 4.060205 TGTCGTTTAGGGAAGCAACTAAC 58.940 43.478 0.00 0.00 0.00 2.34
2682 2859 4.339872 TGTCGTTTAGGGAAGCAACTAA 57.660 40.909 0.00 0.00 0.00 2.24
2683 2860 4.060205 GTTGTCGTTTAGGGAAGCAACTA 58.940 43.478 0.00 0.00 33.96 2.24
2684 2861 2.876550 GTTGTCGTTTAGGGAAGCAACT 59.123 45.455 0.00 0.00 33.96 3.16
2685 2862 2.614983 TGTTGTCGTTTAGGGAAGCAAC 59.385 45.455 0.00 0.00 36.33 4.17
2686 2863 2.920524 TGTTGTCGTTTAGGGAAGCAA 58.079 42.857 0.00 0.00 0.00 3.91
2687 2864 2.614983 GTTGTTGTCGTTTAGGGAAGCA 59.385 45.455 0.00 0.00 0.00 3.91
2688 2865 2.614983 TGTTGTTGTCGTTTAGGGAAGC 59.385 45.455 0.00 0.00 0.00 3.86
2689 2866 4.886247 TTGTTGTTGTCGTTTAGGGAAG 57.114 40.909 0.00 0.00 0.00 3.46
2690 2867 4.942483 TCTTTGTTGTTGTCGTTTAGGGAA 59.058 37.500 0.00 0.00 0.00 3.97
2691 2868 4.515361 TCTTTGTTGTTGTCGTTTAGGGA 58.485 39.130 0.00 0.00 0.00 4.20
2692 2869 4.886247 TCTTTGTTGTTGTCGTTTAGGG 57.114 40.909 0.00 0.00 0.00 3.53
2693 2870 7.411274 TGTAATCTTTGTTGTTGTCGTTTAGG 58.589 34.615 0.00 0.00 0.00 2.69
2694 2871 8.829514 TTGTAATCTTTGTTGTTGTCGTTTAG 57.170 30.769 0.00 0.00 0.00 1.85
2695 2872 9.440784 GATTGTAATCTTTGTTGTTGTCGTTTA 57.559 29.630 0.00 0.00 32.66 2.01
2696 2873 7.971168 TGATTGTAATCTTTGTTGTTGTCGTTT 59.029 29.630 6.21 0.00 36.39 3.60
2697 2874 7.476667 TGATTGTAATCTTTGTTGTTGTCGTT 58.523 30.769 6.21 0.00 36.39 3.85
2698 2875 7.011950 TCTGATTGTAATCTTTGTTGTTGTCGT 59.988 33.333 6.21 0.00 36.39 4.34
2699 2876 7.351981 TCTGATTGTAATCTTTGTTGTTGTCG 58.648 34.615 6.21 0.00 36.39 4.35
2700 2877 9.334693 GATCTGATTGTAATCTTTGTTGTTGTC 57.665 33.333 6.21 0.00 36.39 3.18
2701 2878 8.299570 GGATCTGATTGTAATCTTTGTTGTTGT 58.700 33.333 6.21 0.00 36.39 3.32
2702 2879 8.298854 TGGATCTGATTGTAATCTTTGTTGTTG 58.701 33.333 6.21 0.00 36.39 3.33
2703 2880 8.299570 GTGGATCTGATTGTAATCTTTGTTGTT 58.700 33.333 6.21 0.00 36.39 2.83
2704 2881 7.361201 CGTGGATCTGATTGTAATCTTTGTTGT 60.361 37.037 6.21 0.00 36.39 3.32
2705 2882 6.963242 CGTGGATCTGATTGTAATCTTTGTTG 59.037 38.462 6.21 0.00 36.39 3.33
2706 2883 6.403636 GCGTGGATCTGATTGTAATCTTTGTT 60.404 38.462 6.21 0.00 36.39 2.83
2707 2884 5.065218 GCGTGGATCTGATTGTAATCTTTGT 59.935 40.000 6.21 0.00 36.39 2.83
2708 2885 5.065090 TGCGTGGATCTGATTGTAATCTTTG 59.935 40.000 6.21 0.00 36.39 2.77
2709 2886 5.185454 TGCGTGGATCTGATTGTAATCTTT 58.815 37.500 6.21 0.00 36.39 2.52
2710 2887 4.769688 TGCGTGGATCTGATTGTAATCTT 58.230 39.130 6.21 0.00 36.39 2.40
2711 2888 4.406648 TGCGTGGATCTGATTGTAATCT 57.593 40.909 6.21 0.00 36.39 2.40
2712 2889 4.143242 CGATGCGTGGATCTGATTGTAATC 60.143 45.833 0.00 0.00 35.97 1.75
2713 2890 3.742882 CGATGCGTGGATCTGATTGTAAT 59.257 43.478 0.00 0.00 0.00 1.89
2714 2891 3.123050 CGATGCGTGGATCTGATTGTAA 58.877 45.455 0.00 0.00 0.00 2.41
2715 2892 2.742774 CGATGCGTGGATCTGATTGTA 58.257 47.619 0.00 0.00 0.00 2.41
2716 2893 1.575244 CGATGCGTGGATCTGATTGT 58.425 50.000 0.00 0.00 0.00 2.71
2717 2894 0.234106 GCGATGCGTGGATCTGATTG 59.766 55.000 0.00 0.00 0.00 2.67
2718 2895 2.609825 GCGATGCGTGGATCTGATT 58.390 52.632 0.00 0.00 0.00 2.57
2719 2896 4.350620 GCGATGCGTGGATCTGAT 57.649 55.556 0.00 0.00 0.00 2.90
2746 2923 2.005451 GAGACGATGATGGCCATATGC 58.995 52.381 20.84 7.14 35.17 3.14
2747 2924 3.519579 GAGAGACGATGATGGCCATATG 58.480 50.000 20.84 11.21 35.17 1.78
2748 2925 2.499289 GGAGAGACGATGATGGCCATAT 59.501 50.000 20.84 12.57 35.17 1.78
2749 2926 1.895798 GGAGAGACGATGATGGCCATA 59.104 52.381 20.84 7.82 35.17 2.74
2750 2927 0.683973 GGAGAGACGATGATGGCCAT 59.316 55.000 20.96 20.96 38.43 4.40
2751 2928 0.397675 AGGAGAGACGATGATGGCCA 60.398 55.000 8.56 8.56 0.00 5.36
2752 2929 0.755686 AAGGAGAGACGATGATGGCC 59.244 55.000 0.00 0.00 0.00 5.36
2753 2930 2.208431 CAAAGGAGAGACGATGATGGC 58.792 52.381 0.00 0.00 0.00 4.40
2754 2931 2.158986 AGCAAAGGAGAGACGATGATGG 60.159 50.000 0.00 0.00 0.00 3.51
2755 2932 3.122297 GAGCAAAGGAGAGACGATGATG 58.878 50.000 0.00 0.00 0.00 3.07
2756 2933 3.030291 AGAGCAAAGGAGAGACGATGAT 58.970 45.455 0.00 0.00 0.00 2.45
2757 2934 2.425312 GAGAGCAAAGGAGAGACGATGA 59.575 50.000 0.00 0.00 0.00 2.92
2758 2935 2.794282 CGAGAGCAAAGGAGAGACGATG 60.794 54.545 0.00 0.00 0.00 3.84
2759 2936 1.403679 CGAGAGCAAAGGAGAGACGAT 59.596 52.381 0.00 0.00 0.00 3.73
2760 2937 0.805614 CGAGAGCAAAGGAGAGACGA 59.194 55.000 0.00 0.00 0.00 4.20
2761 2938 0.805614 TCGAGAGCAAAGGAGAGACG 59.194 55.000 0.00 0.00 0.00 4.18
2762 2939 2.559998 CTCGAGAGCAAAGGAGAGAC 57.440 55.000 6.58 0.00 0.00 3.36
2774 2951 1.301677 GGTTTTGCCCAGCTCGAGAG 61.302 60.000 18.75 7.53 0.00 3.20
2775 2952 1.302511 GGTTTTGCCCAGCTCGAGA 60.303 57.895 18.75 0.00 0.00 4.04
2776 2953 1.302832 AGGTTTTGCCCAGCTCGAG 60.303 57.895 8.45 8.45 38.26 4.04
2777 2954 1.600636 CAGGTTTTGCCCAGCTCGA 60.601 57.895 0.00 0.00 38.26 4.04
2778 2955 1.856265 GACAGGTTTTGCCCAGCTCG 61.856 60.000 0.00 0.00 38.26 5.03
2779 2956 0.538287 AGACAGGTTTTGCCCAGCTC 60.538 55.000 0.00 0.00 38.26 4.09
2780 2957 0.106015 AAGACAGGTTTTGCCCAGCT 60.106 50.000 0.00 0.00 38.26 4.24
2781 2958 0.752658 AAAGACAGGTTTTGCCCAGC 59.247 50.000 0.00 0.00 38.26 4.85
2782 2959 3.541996 AAAAAGACAGGTTTTGCCCAG 57.458 42.857 0.00 0.00 38.26 4.45
2802 2979 9.872757 GACGTCTCTGACATTTATGTTTAAAAA 57.127 29.630 8.70 0.00 41.95 1.94
2803 2980 8.500773 GGACGTCTCTGACATTTATGTTTAAAA 58.499 33.333 16.46 0.00 41.95 1.52
2804 2981 7.148705 CGGACGTCTCTGACATTTATGTTTAAA 60.149 37.037 16.46 0.00 41.95 1.52
2805 2982 6.309494 CGGACGTCTCTGACATTTATGTTTAA 59.691 38.462 16.46 0.00 41.95 1.52
2806 2983 5.803461 CGGACGTCTCTGACATTTATGTTTA 59.197 40.000 16.46 0.00 41.95 2.01
2807 2984 4.625742 CGGACGTCTCTGACATTTATGTTT 59.374 41.667 16.46 0.00 41.95 2.83
2808 2985 4.174009 CGGACGTCTCTGACATTTATGTT 58.826 43.478 16.46 0.00 41.95 2.71
2809 2986 3.428999 CCGGACGTCTCTGACATTTATGT 60.429 47.826 16.46 0.00 45.16 2.29
2810 2987 3.116300 CCGGACGTCTCTGACATTTATG 58.884 50.000 16.46 0.00 32.09 1.90
2811 2988 2.481449 GCCGGACGTCTCTGACATTTAT 60.481 50.000 16.46 0.00 32.09 1.40
2812 2989 1.135199 GCCGGACGTCTCTGACATTTA 60.135 52.381 16.46 0.00 32.09 1.40
2813 2990 0.389948 GCCGGACGTCTCTGACATTT 60.390 55.000 16.46 0.00 32.09 2.32
2814 2991 1.215647 GCCGGACGTCTCTGACATT 59.784 57.895 16.46 0.00 32.09 2.71
2815 2992 1.251527 AAGCCGGACGTCTCTGACAT 61.252 55.000 16.46 0.00 32.09 3.06
2816 2993 1.461091 AAAGCCGGACGTCTCTGACA 61.461 55.000 16.46 0.00 32.09 3.58
2817 2994 0.524862 TAAAGCCGGACGTCTCTGAC 59.475 55.000 16.46 0.00 0.00 3.51
2818 2995 1.250328 TTAAAGCCGGACGTCTCTGA 58.750 50.000 16.46 0.55 0.00 3.27
2819 2996 2.074547 TTTAAAGCCGGACGTCTCTG 57.925 50.000 16.46 5.79 0.00 3.35
2820 2997 3.329929 AATTTAAAGCCGGACGTCTCT 57.670 42.857 16.46 7.56 0.00 3.10
2821 2998 5.729974 ATTAATTTAAAGCCGGACGTCTC 57.270 39.130 16.46 4.72 0.00 3.36
2822 2999 7.614124 TTTATTAATTTAAAGCCGGACGTCT 57.386 32.000 16.46 0.00 0.00 4.18
2823 3000 7.887752 CTTTATTAATTTAAAGCCGGACGTC 57.112 36.000 5.05 7.13 33.69 4.34
2836 3013 9.613428 GCCTATTTTTGAGGGCTTTATTAATTT 57.387 29.630 0.00 0.00 41.20 1.82
2837 3014 8.767436 TGCCTATTTTTGAGGGCTTTATTAATT 58.233 29.630 0.00 0.00 44.36 1.40
2838 3015 8.317776 TGCCTATTTTTGAGGGCTTTATTAAT 57.682 30.769 0.00 0.00 44.36 1.40
2839 3016 7.632680 GCTGCCTATTTTTGAGGGCTTTATTAA 60.633 37.037 0.00 0.00 44.36 1.40
2840 3017 6.183360 GCTGCCTATTTTTGAGGGCTTTATTA 60.183 38.462 0.00 0.00 44.36 0.98
2841 3018 5.395657 GCTGCCTATTTTTGAGGGCTTTATT 60.396 40.000 0.00 0.00 44.36 1.40
2842 3019 4.100035 GCTGCCTATTTTTGAGGGCTTTAT 59.900 41.667 0.00 0.00 44.36 1.40
2843 3020 3.447229 GCTGCCTATTTTTGAGGGCTTTA 59.553 43.478 0.00 0.00 44.36 1.85
2844 3021 2.234661 GCTGCCTATTTTTGAGGGCTTT 59.765 45.455 0.00 0.00 44.36 3.51
2845 3022 1.827344 GCTGCCTATTTTTGAGGGCTT 59.173 47.619 0.00 0.00 44.36 4.35
2846 3023 1.478631 GCTGCCTATTTTTGAGGGCT 58.521 50.000 0.00 0.00 44.36 5.19
2847 3024 0.101219 CGCTGCCTATTTTTGAGGGC 59.899 55.000 0.00 0.00 44.31 5.19
2848 3025 1.133025 CACGCTGCCTATTTTTGAGGG 59.867 52.381 0.00 0.00 34.35 4.30
2849 3026 1.468054 GCACGCTGCCTATTTTTGAGG 60.468 52.381 0.00 0.00 37.42 3.86
2850 3027 1.199789 TGCACGCTGCCTATTTTTGAG 59.800 47.619 7.38 0.00 44.23 3.02
2851 3028 1.242989 TGCACGCTGCCTATTTTTGA 58.757 45.000 7.38 0.00 44.23 2.69
2852 3029 2.282701 ATGCACGCTGCCTATTTTTG 57.717 45.000 7.38 0.00 44.23 2.44
2853 3030 2.752354 TGTATGCACGCTGCCTATTTTT 59.248 40.909 7.38 0.00 44.23 1.94
2854 3031 2.364632 TGTATGCACGCTGCCTATTTT 58.635 42.857 7.38 0.00 44.23 1.82
2855 3032 2.036958 TGTATGCACGCTGCCTATTT 57.963 45.000 7.38 0.00 44.23 1.40
2856 3033 1.875514 CATGTATGCACGCTGCCTATT 59.124 47.619 7.38 0.00 44.23 1.73
2857 3034 1.516161 CATGTATGCACGCTGCCTAT 58.484 50.000 7.38 0.00 44.23 2.57
2858 3035 0.532640 CCATGTATGCACGCTGCCTA 60.533 55.000 7.38 0.50 44.23 3.93
2859 3036 1.820906 CCATGTATGCACGCTGCCT 60.821 57.895 7.38 1.34 44.23 4.75
2860 3037 1.375853 TTCCATGTATGCACGCTGCC 61.376 55.000 7.38 0.00 44.23 4.85
2861 3038 0.248215 GTTCCATGTATGCACGCTGC 60.248 55.000 0.00 3.44 45.29 5.25
2862 3039 1.085893 TGTTCCATGTATGCACGCTG 58.914 50.000 0.00 0.00 0.00 5.18
2863 3040 1.739466 CTTGTTCCATGTATGCACGCT 59.261 47.619 0.00 0.00 0.00 5.07
2864 3041 1.737236 TCTTGTTCCATGTATGCACGC 59.263 47.619 0.00 0.00 0.00 5.34
2865 3042 3.622612 TGATCTTGTTCCATGTATGCACG 59.377 43.478 0.00 0.00 0.00 5.34
2866 3043 5.124457 AGTTGATCTTGTTCCATGTATGCAC 59.876 40.000 0.00 0.00 0.00 4.57
2867 3044 5.255687 AGTTGATCTTGTTCCATGTATGCA 58.744 37.500 0.00 0.00 0.00 3.96
2868 3045 5.824904 AGTTGATCTTGTTCCATGTATGC 57.175 39.130 0.00 0.00 0.00 3.14
2869 3046 7.904977 CGTTTAGTTGATCTTGTTCCATGTATG 59.095 37.037 0.00 0.00 0.00 2.39
2870 3047 7.065803 CCGTTTAGTTGATCTTGTTCCATGTAT 59.934 37.037 0.00 0.00 0.00 2.29
2871 3048 6.370442 CCGTTTAGTTGATCTTGTTCCATGTA 59.630 38.462 0.00 0.00 0.00 2.29
2872 3049 5.181245 CCGTTTAGTTGATCTTGTTCCATGT 59.819 40.000 0.00 0.00 0.00 3.21
2873 3050 5.631026 CCGTTTAGTTGATCTTGTTCCATG 58.369 41.667 0.00 0.00 0.00 3.66
2874 3051 4.156008 GCCGTTTAGTTGATCTTGTTCCAT 59.844 41.667 0.00 0.00 0.00 3.41
2875 3052 3.500680 GCCGTTTAGTTGATCTTGTTCCA 59.499 43.478 0.00 0.00 0.00 3.53
2876 3053 3.500680 TGCCGTTTAGTTGATCTTGTTCC 59.499 43.478 0.00 0.00 0.00 3.62
2877 3054 4.742438 TGCCGTTTAGTTGATCTTGTTC 57.258 40.909 0.00 0.00 0.00 3.18
2878 3055 4.261447 GGTTGCCGTTTAGTTGATCTTGTT 60.261 41.667 0.00 0.00 0.00 2.83
2879 3056 3.252458 GGTTGCCGTTTAGTTGATCTTGT 59.748 43.478 0.00 0.00 0.00 3.16
2880 3057 3.666902 CGGTTGCCGTTTAGTTGATCTTG 60.667 47.826 0.00 0.00 42.73 3.02
2881 3058 2.482721 CGGTTGCCGTTTAGTTGATCTT 59.517 45.455 0.00 0.00 42.73 2.40
2882 3059 2.073816 CGGTTGCCGTTTAGTTGATCT 58.926 47.619 0.00 0.00 42.73 2.75
2883 3060 2.520686 CGGTTGCCGTTTAGTTGATC 57.479 50.000 0.00 0.00 42.73 2.92
2895 3072 1.369839 GCTTCCTAGCTTCGGTTGCC 61.370 60.000 0.00 0.00 44.27 4.52
2896 3073 1.369839 GGCTTCCTAGCTTCGGTTGC 61.370 60.000 0.00 2.62 46.90 4.17
2897 3074 0.036388 TGGCTTCCTAGCTTCGGTTG 60.036 55.000 0.00 0.00 46.90 3.77
2898 3075 0.690762 TTGGCTTCCTAGCTTCGGTT 59.309 50.000 0.00 0.00 46.90 4.44
2899 3076 0.250513 CTTGGCTTCCTAGCTTCGGT 59.749 55.000 0.00 0.00 46.90 4.69
2900 3077 0.250513 ACTTGGCTTCCTAGCTTCGG 59.749 55.000 0.00 0.00 46.90 4.30
2901 3078 2.100605 AACTTGGCTTCCTAGCTTCG 57.899 50.000 0.00 0.00 46.90 3.79
2902 3079 2.416893 CGAAACTTGGCTTCCTAGCTTC 59.583 50.000 0.00 2.00 46.90 3.86
2903 3080 2.038557 TCGAAACTTGGCTTCCTAGCTT 59.961 45.455 0.00 0.00 46.90 3.74
2904 3081 1.623811 TCGAAACTTGGCTTCCTAGCT 59.376 47.619 0.00 0.00 46.90 3.32
2906 3083 3.926616 TCTTCGAAACTTGGCTTCCTAG 58.073 45.455 0.00 0.00 32.84 3.02
2907 3084 4.345859 TTCTTCGAAACTTGGCTTCCTA 57.654 40.909 0.00 0.00 0.00 2.94
2908 3085 2.930826 TCTTCGAAACTTGGCTTCCT 57.069 45.000 0.00 0.00 0.00 3.36
2909 3086 3.853676 GCTTTCTTCGAAACTTGGCTTCC 60.854 47.826 0.00 0.00 0.00 3.46
2910 3087 3.300857 GCTTTCTTCGAAACTTGGCTTC 58.699 45.455 0.00 0.00 0.00 3.86
2911 3088 2.034685 GGCTTTCTTCGAAACTTGGCTT 59.965 45.455 0.00 0.00 0.00 4.35
2912 3089 1.609072 GGCTTTCTTCGAAACTTGGCT 59.391 47.619 0.00 0.00 0.00 4.75
2913 3090 1.336755 TGGCTTTCTTCGAAACTTGGC 59.663 47.619 0.00 3.60 0.00 4.52
2914 3091 3.708563 TTGGCTTTCTTCGAAACTTGG 57.291 42.857 0.00 0.00 0.00 3.61
2915 3092 4.504097 CCTTTTGGCTTTCTTCGAAACTTG 59.496 41.667 0.00 0.00 0.00 3.16
2916 3093 4.682787 CCTTTTGGCTTTCTTCGAAACTT 58.317 39.130 0.00 0.00 0.00 2.66
2917 3094 4.307443 CCTTTTGGCTTTCTTCGAAACT 57.693 40.909 0.00 0.00 0.00 2.66
2931 3108 2.047274 TCCGCTCTCGCCTTTTGG 60.047 61.111 0.00 0.00 44.18 3.28
2932 3109 0.460987 ATCTCCGCTCTCGCCTTTTG 60.461 55.000 0.00 0.00 0.00 2.44
2933 3110 1.112113 TATCTCCGCTCTCGCCTTTT 58.888 50.000 0.00 0.00 0.00 2.27
2934 3111 1.067821 CTTATCTCCGCTCTCGCCTTT 59.932 52.381 0.00 0.00 0.00 3.11
2935 3112 0.671251 CTTATCTCCGCTCTCGCCTT 59.329 55.000 0.00 0.00 0.00 4.35
2936 3113 0.466555 ACTTATCTCCGCTCTCGCCT 60.467 55.000 0.00 0.00 0.00 5.52
2937 3114 0.318275 CACTTATCTCCGCTCTCGCC 60.318 60.000 0.00 0.00 0.00 5.54
2938 3115 0.937231 GCACTTATCTCCGCTCTCGC 60.937 60.000 0.00 0.00 0.00 5.03
2939 3116 0.382158 TGCACTTATCTCCGCTCTCG 59.618 55.000 0.00 0.00 0.00 4.04
2940 3117 2.810439 ATGCACTTATCTCCGCTCTC 57.190 50.000 0.00 0.00 0.00 3.20
2941 3118 3.384789 TGTAATGCACTTATCTCCGCTCT 59.615 43.478 0.00 0.00 0.00 4.09
2942 3119 3.717707 TGTAATGCACTTATCTCCGCTC 58.282 45.455 0.00 0.00 0.00 5.03
2943 3120 3.819564 TGTAATGCACTTATCTCCGCT 57.180 42.857 0.00 0.00 0.00 5.52
2944 3121 3.187227 CCATGTAATGCACTTATCTCCGC 59.813 47.826 0.00 0.00 44.97 5.54
2945 3122 3.187227 GCCATGTAATGCACTTATCTCCG 59.813 47.826 0.00 0.00 44.97 4.63
2946 3123 3.503748 GGCCATGTAATGCACTTATCTCC 59.496 47.826 0.00 0.00 44.97 3.71
2947 3124 4.392940 AGGCCATGTAATGCACTTATCTC 58.607 43.478 5.01 0.00 44.97 2.75
2948 3125 4.443978 AGGCCATGTAATGCACTTATCT 57.556 40.909 5.01 0.00 44.97 1.98
2949 3126 4.154918 GCTAGGCCATGTAATGCACTTATC 59.845 45.833 5.01 0.00 44.97 1.75
2950 3127 4.074970 GCTAGGCCATGTAATGCACTTAT 58.925 43.478 5.01 0.00 44.97 1.73
2951 3128 3.136443 AGCTAGGCCATGTAATGCACTTA 59.864 43.478 5.01 0.00 44.97 2.24
2952 3129 2.092212 AGCTAGGCCATGTAATGCACTT 60.092 45.455 5.01 0.00 44.97 3.16
2953 3130 1.492176 AGCTAGGCCATGTAATGCACT 59.508 47.619 5.01 0.00 44.97 4.40
2954 3131 1.972872 AGCTAGGCCATGTAATGCAC 58.027 50.000 5.01 0.00 44.97 4.57
2955 3132 2.550855 GCTAGCTAGGCCATGTAATGCA 60.551 50.000 22.10 0.00 44.97 3.96
2956 3133 2.079925 GCTAGCTAGGCCATGTAATGC 58.920 52.381 22.10 0.11 44.97 3.56
2967 3144 3.612955 GCTCGTTATTCTGGCTAGCTAGG 60.613 52.174 25.85 10.37 0.00 3.02
2968 3145 3.004839 TGCTCGTTATTCTGGCTAGCTAG 59.995 47.826 21.31 21.31 0.00 3.42
2969 3146 2.956333 TGCTCGTTATTCTGGCTAGCTA 59.044 45.455 15.72 7.83 0.00 3.32
2970 3147 1.757118 TGCTCGTTATTCTGGCTAGCT 59.243 47.619 15.72 0.00 0.00 3.32
2971 3148 1.861575 GTGCTCGTTATTCTGGCTAGC 59.138 52.381 6.04 6.04 0.00 3.42
2972 3149 2.120232 CGTGCTCGTTATTCTGGCTAG 58.880 52.381 0.00 0.00 0.00 3.42
2973 3150 1.801395 GCGTGCTCGTTATTCTGGCTA 60.801 52.381 10.18 0.00 39.49 3.93
2974 3151 1.084370 GCGTGCTCGTTATTCTGGCT 61.084 55.000 10.18 0.00 39.49 4.75
2975 3152 1.348594 GCGTGCTCGTTATTCTGGC 59.651 57.895 10.18 0.00 39.49 4.85
2976 3153 0.647410 CTGCGTGCTCGTTATTCTGG 59.353 55.000 10.18 0.00 39.49 3.86
2977 3154 0.647410 CCTGCGTGCTCGTTATTCTG 59.353 55.000 10.18 0.00 39.49 3.02
2978 3155 1.084370 GCCTGCGTGCTCGTTATTCT 61.084 55.000 10.18 0.00 39.49 2.40
2979 3156 1.084370 AGCCTGCGTGCTCGTTATTC 61.084 55.000 10.18 0.00 36.75 1.75
2980 3157 1.079127 AGCCTGCGTGCTCGTTATT 60.079 52.632 10.18 0.00 36.75 1.40
2981 3158 2.579201 AGCCTGCGTGCTCGTTAT 59.421 55.556 10.18 0.00 36.75 1.89
2987 3164 0.671781 CTACTTTGAGCCTGCGTGCT 60.672 55.000 0.00 0.00 46.37 4.40
2988 3165 1.790387 CTACTTTGAGCCTGCGTGC 59.210 57.895 0.00 0.00 0.00 5.34
2989 3166 1.790387 GCTACTTTGAGCCTGCGTG 59.210 57.895 0.00 0.00 36.38 5.34
2990 3167 1.738099 CGCTACTTTGAGCCTGCGT 60.738 57.895 0.00 0.00 39.43 5.24
2991 3168 2.456119 CCGCTACTTTGAGCCTGCG 61.456 63.158 0.00 0.00 39.43 5.18
2992 3169 2.109126 CCCGCTACTTTGAGCCTGC 61.109 63.158 0.00 0.00 39.43 4.85
2993 3170 0.741221 GTCCCGCTACTTTGAGCCTG 60.741 60.000 0.00 0.00 39.43 4.85
2994 3171 1.597461 GTCCCGCTACTTTGAGCCT 59.403 57.895 0.00 0.00 39.43 4.58
2995 3172 1.449778 GGTCCCGCTACTTTGAGCC 60.450 63.158 0.00 0.00 39.43 4.70
2996 3173 0.321298 TTGGTCCCGCTACTTTGAGC 60.321 55.000 0.00 0.00 39.20 4.26
2997 3174 2.178912 TTTGGTCCCGCTACTTTGAG 57.821 50.000 0.00 0.00 0.00 3.02
2998 3175 2.500229 CTTTTGGTCCCGCTACTTTGA 58.500 47.619 0.00 0.00 0.00 2.69
2999 3176 1.539827 CCTTTTGGTCCCGCTACTTTG 59.460 52.381 0.00 0.00 34.07 2.77
3000 3177 1.422402 TCCTTTTGGTCCCGCTACTTT 59.578 47.619 0.00 0.00 41.38 2.66
3001 3178 1.061546 TCCTTTTGGTCCCGCTACTT 58.938 50.000 0.00 0.00 41.38 2.24
3002 3179 0.323957 GTCCTTTTGGTCCCGCTACT 59.676 55.000 0.00 0.00 41.38 2.57
3003 3180 0.675837 GGTCCTTTTGGTCCCGCTAC 60.676 60.000 0.00 0.00 41.15 3.58
3004 3181 1.128809 TGGTCCTTTTGGTCCCGCTA 61.129 55.000 0.00 0.00 45.49 4.26
3005 3182 2.434774 GGTCCTTTTGGTCCCGCT 59.565 61.111 0.00 0.00 41.15 5.52
3006 3183 2.114411 TGGTCCTTTTGGTCCCGC 59.886 61.111 0.00 0.00 45.49 6.13
3007 3184 1.602605 GGTGGTCCTTTTGGTCCCG 60.603 63.158 0.00 0.00 45.49 5.14
3008 3185 1.069775 TAGGTGGTCCTTTTGGTCCC 58.930 55.000 0.00 0.00 45.49 4.46
3009 3186 2.356844 GGATAGGTGGTCCTTTTGGTCC 60.357 54.545 0.00 0.00 46.13 4.46
3010 3187 2.356844 GGGATAGGTGGTCCTTTTGGTC 60.357 54.545 0.00 0.00 42.12 4.02
3011 3188 1.639108 GGGATAGGTGGTCCTTTTGGT 59.361 52.381 0.00 0.00 42.12 3.67
3012 3189 2.437085 GGGATAGGTGGTCCTTTTGG 57.563 55.000 0.00 0.00 42.12 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.