Multiple sequence alignment - TraesCS4B01G179600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G179600 chr4B 100.000 8456 0 0 1 8456 394103255 394111710 0.000000e+00 15616.0
1 TraesCS4B01G179600 chr4B 87.556 450 51 5 8 454 637260035 637259588 4.530000e-142 516.0
2 TraesCS4B01G179600 chr4B 98.462 65 1 0 6334 6398 394109524 394109588 1.930000e-21 115.0
3 TraesCS4B01G179600 chr4B 98.462 65 1 0 6270 6334 394109588 394109652 1.930000e-21 115.0
4 TraesCS4B01G179600 chr4B 84.158 101 12 4 3879 3977 366897081 366896983 2.510000e-15 95.3
5 TraesCS4B01G179600 chr4D 96.832 6756 118 46 1725 8409 316527520 316534250 0.000000e+00 11202.0
6 TraesCS4B01G179600 chr4D 96.599 1088 27 6 640 1726 316526280 316527358 0.000000e+00 1796.0
7 TraesCS4B01G179600 chr4D 98.462 65 1 0 6334 6398 316532063 316532127 1.930000e-21 115.0
8 TraesCS4B01G179600 chr4D 98.462 65 1 0 6270 6334 316532127 316532191 1.930000e-21 115.0
9 TraesCS4B01G179600 chr4D 98.387 62 1 0 8395 8456 316534268 316534329 8.970000e-20 110.0
10 TraesCS4B01G179600 chr4A 96.106 4109 103 20 664 4750 158189885 158185812 0.000000e+00 6649.0
11 TraesCS4B01G179600 chr4A 96.277 3707 81 23 4749 8407 158185687 158181990 0.000000e+00 6028.0
12 TraesCS4B01G179600 chr4A 79.343 213 43 1 436 647 722861148 722860936 1.900000e-31 148.0
13 TraesCS4B01G179600 chr4A 96.923 65 2 0 6334 6398 158184169 158184105 8.970000e-20 110.0
14 TraesCS4B01G179600 chr4A 96.774 62 2 0 8395 8456 158181969 158181908 4.180000e-18 104.0
15 TraesCS4B01G179600 chr4A 95.385 65 3 0 6270 6334 158184105 158184041 4.180000e-18 104.0
16 TraesCS4B01G179600 chr4A 82.883 111 15 4 3876 3984 542605671 542605779 6.990000e-16 97.1
17 TraesCS4B01G179600 chr7D 96.078 459 13 4 3553 4007 112768764 112769221 0.000000e+00 743.0
18 TraesCS4B01G179600 chr7D 88.621 457 43 6 1 454 428946473 428946923 1.600000e-151 547.0
19 TraesCS4B01G179600 chr7D 88.688 442 46 4 1 439 202503621 202504061 3.470000e-148 536.0
20 TraesCS4B01G179600 chr7D 87.527 457 52 5 1 454 537252564 537253018 2.700000e-144 523.0
21 TraesCS4B01G179600 chr7D 85.106 94 13 1 3887 3980 265706885 265706793 2.510000e-15 95.3
22 TraesCS4B01G179600 chr7D 96.970 33 1 0 2009 2041 8604073 8604105 1.000000e-03 56.5
23 TraesCS4B01G179600 chr2A 89.059 457 44 5 1 454 524584286 524584739 5.730000e-156 562.0
24 TraesCS4B01G179600 chr6D 88.403 457 48 5 1 454 99278125 99278579 5.770000e-151 545.0
25 TraesCS4B01G179600 chr6D 88.274 452 45 8 7 454 48162181 48161734 1.250000e-147 534.0
26 TraesCS4B01G179600 chr6D 92.308 52 4 0 598 649 42416997 42416946 3.270000e-09 75.0
27 TraesCS4B01G179600 chr7B 87.527 457 50 7 1 454 728105663 728105211 9.730000e-144 521.0
28 TraesCS4B01G179600 chr7B 84.906 106 15 1 3879 3984 246011854 246011750 1.160000e-18 106.0
29 TraesCS4B01G179600 chr5B 87.309 457 50 8 1 454 266506458 266506909 4.530000e-142 516.0
30 TraesCS4B01G179600 chr5B 79.372 223 44 2 436 656 301573097 301573319 1.140000e-33 156.0
31 TraesCS4B01G179600 chr5B 82.781 151 26 0 496 646 54760343 54760493 1.480000e-27 135.0
32 TraesCS4B01G179600 chr3A 91.593 226 14 1 7850 8075 543727214 543726994 2.960000e-79 307.0
33 TraesCS4B01G179600 chr3A 90.964 166 12 2 8073 8238 543726373 543726211 3.970000e-53 220.0
34 TraesCS4B01G179600 chr3A 92.373 118 6 3 8340 8456 543726108 543725993 1.890000e-36 165.0
35 TraesCS4B01G179600 chr3A 83.673 98 16 0 3880 3977 207243082 207243179 9.040000e-15 93.5
36 TraesCS4B01G179600 chr5A 84.135 208 32 1 440 646 291993979 291993772 5.180000e-47 200.0
37 TraesCS4B01G179600 chr1A 82.051 195 33 2 434 626 98496796 98496602 1.890000e-36 165.0
38 TraesCS4B01G179600 chr1A 82.143 196 31 4 434 626 98525361 98525167 1.890000e-36 165.0
39 TraesCS4B01G179600 chr1D 79.688 192 38 1 436 626 79819361 79819170 4.120000e-28 137.0
40 TraesCS4B01G179600 chr1D 90.385 52 3 2 2039 2088 247528708 247528657 5.480000e-07 67.6
41 TraesCS4B01G179600 chr2D 84.762 105 14 2 1984 2086 306530183 306530079 4.180000e-18 104.0
42 TraesCS4B01G179600 chr7A 86.022 93 12 1 3888 3980 290925880 290925789 1.940000e-16 99.0
43 TraesCS4B01G179600 chr7A 96.970 33 1 0 1997 2029 156565693 156565661 1.000000e-03 56.5
44 TraesCS4B01G179600 chr3B 74.060 266 43 19 1824 2080 434055048 434054800 1.510000e-12 86.1
45 TraesCS4B01G179600 chr3B 81.443 97 18 0 1976 2072 630002337 630002241 7.040000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G179600 chr4B 394103255 394111710 8455 False 5282.000000 15616 98.974667 1 8456 3 chr4B.!!$F1 8455
1 TraesCS4B01G179600 chr4D 316526280 316534329 8049 False 2667.600000 11202 97.748400 640 8456 5 chr4D.!!$F1 7816
2 TraesCS4B01G179600 chr4A 158181908 158189885 7977 True 2599.000000 6649 96.293000 664 8456 5 chr4A.!!$R2 7792
3 TraesCS4B01G179600 chr3A 543725993 543727214 1221 True 230.666667 307 91.643333 7850 8456 3 chr3A.!!$R1 606

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
237 238 0.033366 TCCCATACATCGCCATCGTG 59.967 55.000 0.00 0.00 36.96 4.35 F
467 468 0.037303 AAGTGACACATGGAGGCTGG 59.963 55.000 8.59 0.00 0.00 4.85 F
516 517 0.038618 GGTTAAAGGCCTTTGCACGG 60.039 55.000 35.99 0.00 40.13 4.94 F
525 526 0.109781 CCTTTGCACGGATGGAAACG 60.110 55.000 0.00 0.00 40.80 3.60 F
526 527 0.109781 CTTTGCACGGATGGAAACGG 60.110 55.000 0.00 0.00 40.80 4.44 F
773 774 0.245539 CACCCGGATAACTGTCACGT 59.754 55.000 0.73 0.00 0.00 4.49 F
1542 1550 0.617935 TCATCAGGGATTTCGTGCCA 59.382 50.000 0.00 0.00 41.63 4.92 F
3113 3290 1.202770 GGTTGCTGGTGACCTTACAGT 60.203 52.381 2.11 0.00 34.79 3.55 F
3473 3652 0.322546 GGGCCCGTTCAATGAAGAGT 60.323 55.000 5.69 0.00 0.00 3.24 F
3706 3893 1.077930 ATCTCATTGCCACAGCGCT 60.078 52.632 2.64 2.64 44.31 5.92 F
4562 4754 2.545526 CTCCATCATTCAATTCCGGACG 59.454 50.000 1.83 0.00 0.00 4.79 F
5166 5488 3.749609 GCTTGTGTTATACCTTTGACGGT 59.250 43.478 0.00 0.00 41.10 4.83 F
6254 6578 2.560105 GCTTTGCCCAAGAACTGAATCT 59.440 45.455 0.00 0.00 33.80 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1434 1442 0.319986 TGCCGCAGTAATTCACGACA 60.320 50.000 0.00 0.00 0.00 4.35 R
2262 2436 0.321671 TAGCAGACAGTGGAAGGTGC 59.678 55.000 0.00 0.00 0.00 5.01 R
2273 2447 1.552578 ACATACACCGGTAGCAGACA 58.447 50.000 6.87 0.00 31.88 3.41 R
2403 2577 4.228824 ACAGGGTAAACTCACTCTAACCA 58.771 43.478 0.00 0.00 0.00 3.67 R
2621 2797 2.290896 TGCCTAGCCCCATGCATATTAC 60.291 50.000 0.00 0.00 44.83 1.89 R
2846 3023 1.748732 TCCAACTACCAACCCCATGA 58.251 50.000 0.00 0.00 0.00 3.07 R
3228 3407 0.727398 GCCCTTCGTTTCCATCTTCG 59.273 55.000 0.00 0.00 0.00 3.79 R
4148 4340 0.308684 CCATGTCGCACCACATATGC 59.691 55.000 1.58 0.00 35.10 3.14 R
5481 5803 1.010294 TCCTCTTACCCCATAAGGCCA 59.990 52.381 5.01 0.00 40.78 5.36 R
5482 5804 1.815757 TCCTCTTACCCCATAAGGCC 58.184 55.000 0.00 0.00 40.78 5.19 R
6240 6562 6.404708 TCATTCAGAGAGATTCAGTTCTTGG 58.595 40.000 0.00 0.00 0.00 3.61 R
7183 7513 3.404224 TTGGCCTCGTGTACACAATTA 57.596 42.857 24.98 6.95 0.00 1.40 R
7619 7977 1.069204 AGCAGAGCAAAGTTCACGAGA 59.931 47.619 0.00 0.00 0.00 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.978460 GAGCTCCGAAATCTCCTCC 57.022 57.895 0.87 0.00 0.00 4.30
19 20 1.408969 GAGCTCCGAAATCTCCTCCT 58.591 55.000 0.87 0.00 0.00 3.69
20 21 2.588620 GAGCTCCGAAATCTCCTCCTA 58.411 52.381 0.87 0.00 0.00 2.94
21 22 2.959707 GAGCTCCGAAATCTCCTCCTAA 59.040 50.000 0.87 0.00 0.00 2.69
22 23 3.375699 AGCTCCGAAATCTCCTCCTAAA 58.624 45.455 0.00 0.00 0.00 1.85
23 24 3.133183 AGCTCCGAAATCTCCTCCTAAAC 59.867 47.826 0.00 0.00 0.00 2.01
24 25 3.118738 GCTCCGAAATCTCCTCCTAAACA 60.119 47.826 0.00 0.00 0.00 2.83
25 26 4.443598 GCTCCGAAATCTCCTCCTAAACAT 60.444 45.833 0.00 0.00 0.00 2.71
26 27 5.277857 TCCGAAATCTCCTCCTAAACATC 57.722 43.478 0.00 0.00 0.00 3.06
27 28 4.101119 TCCGAAATCTCCTCCTAAACATCC 59.899 45.833 0.00 0.00 0.00 3.51
28 29 4.101741 CCGAAATCTCCTCCTAAACATCCT 59.898 45.833 0.00 0.00 0.00 3.24
29 30 5.396884 CCGAAATCTCCTCCTAAACATCCTT 60.397 44.000 0.00 0.00 0.00 3.36
30 31 5.755861 CGAAATCTCCTCCTAAACATCCTTC 59.244 44.000 0.00 0.00 0.00 3.46
31 32 4.946478 ATCTCCTCCTAAACATCCTTCG 57.054 45.455 0.00 0.00 0.00 3.79
32 33 2.431057 TCTCCTCCTAAACATCCTTCGC 59.569 50.000 0.00 0.00 0.00 4.70
33 34 1.485066 TCCTCCTAAACATCCTTCGCC 59.515 52.381 0.00 0.00 0.00 5.54
34 35 1.486726 CCTCCTAAACATCCTTCGCCT 59.513 52.381 0.00 0.00 0.00 5.52
35 36 2.555199 CTCCTAAACATCCTTCGCCTG 58.445 52.381 0.00 0.00 0.00 4.85
36 37 1.017387 CCTAAACATCCTTCGCCTGC 58.983 55.000 0.00 0.00 0.00 4.85
37 38 1.407437 CCTAAACATCCTTCGCCTGCT 60.407 52.381 0.00 0.00 0.00 4.24
38 39 1.936547 CTAAACATCCTTCGCCTGCTC 59.063 52.381 0.00 0.00 0.00 4.26
39 40 0.678048 AAACATCCTTCGCCTGCTCC 60.678 55.000 0.00 0.00 0.00 4.70
40 41 2.203126 CATCCTTCGCCTGCTCCC 60.203 66.667 0.00 0.00 0.00 4.30
41 42 3.854669 ATCCTTCGCCTGCTCCCG 61.855 66.667 0.00 0.00 0.00 5.14
43 44 3.854669 CCTTCGCCTGCTCCCGAT 61.855 66.667 0.00 0.00 33.04 4.18
44 45 2.187946 CTTCGCCTGCTCCCGATT 59.812 61.111 0.00 0.00 33.04 3.34
45 46 1.441729 CTTCGCCTGCTCCCGATTA 59.558 57.895 0.00 0.00 33.04 1.75
46 47 0.034059 CTTCGCCTGCTCCCGATTAT 59.966 55.000 0.00 0.00 33.04 1.28
47 48 0.033504 TTCGCCTGCTCCCGATTATC 59.966 55.000 0.00 0.00 33.04 1.75
48 49 1.374758 CGCCTGCTCCCGATTATCC 60.375 63.158 0.00 0.00 0.00 2.59
49 50 1.821061 CGCCTGCTCCCGATTATCCT 61.821 60.000 0.00 0.00 0.00 3.24
50 51 0.036858 GCCTGCTCCCGATTATCCTC 60.037 60.000 0.00 0.00 0.00 3.71
51 52 0.244994 CCTGCTCCCGATTATCCTCG 59.755 60.000 0.00 0.00 38.37 4.63
52 53 0.389166 CTGCTCCCGATTATCCTCGC 60.389 60.000 0.00 0.00 37.33 5.03
53 54 1.079750 GCTCCCGATTATCCTCGCC 60.080 63.158 0.00 0.00 37.33 5.54
54 55 1.536943 GCTCCCGATTATCCTCGCCT 61.537 60.000 0.00 0.00 37.33 5.52
55 56 0.528470 CTCCCGATTATCCTCGCCTC 59.472 60.000 0.00 0.00 37.33 4.70
56 57 0.898789 TCCCGATTATCCTCGCCTCC 60.899 60.000 0.00 0.00 37.33 4.30
57 58 1.592223 CCGATTATCCTCGCCTCCC 59.408 63.158 0.00 0.00 37.33 4.30
58 59 1.592223 CGATTATCCTCGCCTCCCC 59.408 63.158 0.00 0.00 0.00 4.81
59 60 0.900647 CGATTATCCTCGCCTCCCCT 60.901 60.000 0.00 0.00 0.00 4.79
60 61 1.616187 CGATTATCCTCGCCTCCCCTA 60.616 57.143 0.00 0.00 0.00 3.53
61 62 2.104170 GATTATCCTCGCCTCCCCTAG 58.896 57.143 0.00 0.00 0.00 3.02
62 63 0.542232 TTATCCTCGCCTCCCCTAGC 60.542 60.000 0.00 0.00 0.00 3.42
63 64 1.726192 TATCCTCGCCTCCCCTAGCA 61.726 60.000 0.00 0.00 0.00 3.49
64 65 3.541713 CCTCGCCTCCCCTAGCAC 61.542 72.222 0.00 0.00 0.00 4.40
65 66 3.541713 CTCGCCTCCCCTAGCACC 61.542 72.222 0.00 0.00 0.00 5.01
66 67 4.075793 TCGCCTCCCCTAGCACCT 62.076 66.667 0.00 0.00 0.00 4.00
67 68 3.541713 CGCCTCCCCTAGCACCTC 61.542 72.222 0.00 0.00 0.00 3.85
68 69 2.041405 GCCTCCCCTAGCACCTCT 60.041 66.667 0.00 0.00 0.00 3.69
69 70 2.439104 GCCTCCCCTAGCACCTCTG 61.439 68.421 0.00 0.00 0.00 3.35
70 71 2.439104 CCTCCCCTAGCACCTCTGC 61.439 68.421 0.00 0.00 44.63 4.26
71 72 2.365635 TCCCCTAGCACCTCTGCC 60.366 66.667 0.00 0.00 45.53 4.85
72 73 3.854669 CCCCTAGCACCTCTGCCG 61.855 72.222 0.00 0.00 45.53 5.69
73 74 2.759973 CCCTAGCACCTCTGCCGA 60.760 66.667 0.00 0.00 45.53 5.54
74 75 2.496817 CCTAGCACCTCTGCCGAC 59.503 66.667 0.00 0.00 45.53 4.79
75 76 2.103143 CTAGCACCTCTGCCGACG 59.897 66.667 0.00 0.00 45.53 5.12
76 77 2.360726 TAGCACCTCTGCCGACGA 60.361 61.111 0.00 0.00 45.53 4.20
77 78 2.329678 CTAGCACCTCTGCCGACGAG 62.330 65.000 0.00 0.00 45.53 4.18
88 89 4.933064 CGACGAGCGCCTCCCATC 62.933 72.222 2.29 0.00 0.00 3.51
89 90 4.933064 GACGAGCGCCTCCCATCG 62.933 72.222 12.23 12.23 40.86 3.84
117 118 2.280457 GCTCGCAGCTACCCATCC 60.280 66.667 0.00 0.00 38.45 3.51
118 119 2.801631 GCTCGCAGCTACCCATCCT 61.802 63.158 0.00 0.00 38.45 3.24
119 120 1.365633 CTCGCAGCTACCCATCCTC 59.634 63.158 0.00 0.00 0.00 3.71
120 121 2.093537 CTCGCAGCTACCCATCCTCC 62.094 65.000 0.00 0.00 0.00 4.30
121 122 2.423446 GCAGCTACCCATCCTCCG 59.577 66.667 0.00 0.00 0.00 4.63
122 123 3.142393 CAGCTACCCATCCTCCGG 58.858 66.667 0.00 0.00 0.00 5.14
139 140 3.384348 GGCACCCCACGTTCTCTA 58.616 61.111 0.00 0.00 0.00 2.43
140 141 1.218316 GGCACCCCACGTTCTCTAG 59.782 63.158 0.00 0.00 0.00 2.43
141 142 1.448013 GCACCCCACGTTCTCTAGC 60.448 63.158 0.00 0.00 0.00 3.42
142 143 1.218316 CACCCCACGTTCTCTAGCC 59.782 63.158 0.00 0.00 0.00 3.93
143 144 1.229082 ACCCCACGTTCTCTAGCCA 60.229 57.895 0.00 0.00 0.00 4.75
144 145 1.218316 CCCCACGTTCTCTAGCCAC 59.782 63.158 0.00 0.00 0.00 5.01
145 146 1.218316 CCCACGTTCTCTAGCCACC 59.782 63.158 0.00 0.00 0.00 4.61
146 147 1.258445 CCCACGTTCTCTAGCCACCT 61.258 60.000 0.00 0.00 0.00 4.00
147 148 0.173708 CCACGTTCTCTAGCCACCTC 59.826 60.000 0.00 0.00 0.00 3.85
148 149 0.888619 CACGTTCTCTAGCCACCTCA 59.111 55.000 0.00 0.00 0.00 3.86
149 150 1.135257 CACGTTCTCTAGCCACCTCAG 60.135 57.143 0.00 0.00 0.00 3.35
150 151 0.457851 CGTTCTCTAGCCACCTCAGG 59.542 60.000 0.00 0.00 0.00 3.86
166 167 2.694260 AGGCCACTGATGCTTCTCT 58.306 52.632 5.01 0.00 0.00 3.10
167 168 0.540923 AGGCCACTGATGCTTCTCTC 59.459 55.000 5.01 0.00 0.00 3.20
168 169 0.463474 GGCCACTGATGCTTCTCTCC 60.463 60.000 0.00 0.00 0.00 3.71
169 170 0.463474 GCCACTGATGCTTCTCTCCC 60.463 60.000 0.88 0.00 0.00 4.30
170 171 0.179089 CCACTGATGCTTCTCTCCCG 60.179 60.000 0.88 0.00 0.00 5.14
171 172 0.809241 CACTGATGCTTCTCTCCCGC 60.809 60.000 0.88 0.00 0.00 6.13
172 173 1.260538 ACTGATGCTTCTCTCCCGCA 61.261 55.000 0.88 0.00 38.14 5.69
173 174 0.809241 CTGATGCTTCTCTCCCGCAC 60.809 60.000 0.88 0.00 36.37 5.34
174 175 1.522580 GATGCTTCTCTCCCGCACC 60.523 63.158 0.00 0.00 36.37 5.01
175 176 2.932130 GATGCTTCTCTCCCGCACCC 62.932 65.000 0.00 0.00 36.37 4.61
176 177 3.394836 GCTTCTCTCCCGCACCCT 61.395 66.667 0.00 0.00 0.00 4.34
177 178 2.896443 CTTCTCTCCCGCACCCTC 59.104 66.667 0.00 0.00 0.00 4.30
178 179 3.068691 TTCTCTCCCGCACCCTCG 61.069 66.667 0.00 0.00 0.00 4.63
188 189 4.473520 CACCCTCGCAAGCCCGAT 62.474 66.667 0.00 0.00 36.54 4.18
189 190 4.162690 ACCCTCGCAAGCCCGATC 62.163 66.667 0.00 0.00 36.54 3.69
190 191 3.854669 CCCTCGCAAGCCCGATCT 61.855 66.667 0.00 0.00 36.54 2.75
191 192 2.187946 CCTCGCAAGCCCGATCTT 59.812 61.111 0.00 0.00 36.54 2.40
192 193 2.176273 CCTCGCAAGCCCGATCTTG 61.176 63.158 10.87 10.87 44.63 3.02
196 197 2.796651 CAAGCCCGATCTTGCAGC 59.203 61.111 6.17 0.00 37.27 5.25
197 198 2.439156 AAGCCCGATCTTGCAGCC 60.439 61.111 6.17 0.00 0.00 4.85
198 199 3.272364 AAGCCCGATCTTGCAGCCA 62.272 57.895 6.17 0.00 0.00 4.75
199 200 3.512516 GCCCGATCTTGCAGCCAC 61.513 66.667 0.00 0.00 0.00 5.01
200 201 2.270205 CCCGATCTTGCAGCCACT 59.730 61.111 0.00 0.00 0.00 4.00
201 202 1.817099 CCCGATCTTGCAGCCACTC 60.817 63.158 0.00 0.00 0.00 3.51
202 203 2.169789 CCGATCTTGCAGCCACTCG 61.170 63.158 0.00 0.00 0.00 4.18
203 204 1.153765 CGATCTTGCAGCCACTCGA 60.154 57.895 0.00 0.00 0.00 4.04
204 205 1.416813 CGATCTTGCAGCCACTCGAC 61.417 60.000 0.00 0.00 0.00 4.20
205 206 0.108424 GATCTTGCAGCCACTCGACT 60.108 55.000 0.00 0.00 0.00 4.18
206 207 0.390866 ATCTTGCAGCCACTCGACTG 60.391 55.000 0.00 0.00 36.96 3.51
210 211 4.767255 CAGCCACTCGACTGCCCC 62.767 72.222 0.00 0.00 0.00 5.80
212 213 4.329545 GCCACTCGACTGCCCCAA 62.330 66.667 0.00 0.00 0.00 4.12
213 214 2.358737 CCACTCGACTGCCCCAAC 60.359 66.667 0.00 0.00 0.00 3.77
214 215 2.738521 CACTCGACTGCCCCAACG 60.739 66.667 0.00 0.00 0.00 4.10
215 216 4.681978 ACTCGACTGCCCCAACGC 62.682 66.667 0.00 0.00 0.00 4.84
224 225 3.093835 CCCCAACGCCCTCCCATA 61.094 66.667 0.00 0.00 0.00 2.74
225 226 2.192175 CCCAACGCCCTCCCATAC 59.808 66.667 0.00 0.00 0.00 2.39
226 227 2.675242 CCCAACGCCCTCCCATACA 61.675 63.158 0.00 0.00 0.00 2.29
227 228 1.531748 CCAACGCCCTCCCATACAT 59.468 57.895 0.00 0.00 0.00 2.29
228 229 0.535102 CCAACGCCCTCCCATACATC 60.535 60.000 0.00 0.00 0.00 3.06
229 230 0.880278 CAACGCCCTCCCATACATCG 60.880 60.000 0.00 0.00 0.00 3.84
230 231 2.357517 CGCCCTCCCATACATCGC 60.358 66.667 0.00 0.00 0.00 4.58
231 232 2.032681 GCCCTCCCATACATCGCC 59.967 66.667 0.00 0.00 0.00 5.54
232 233 2.818169 GCCCTCCCATACATCGCCA 61.818 63.158 0.00 0.00 0.00 5.69
233 234 2.069776 CCCTCCCATACATCGCCAT 58.930 57.895 0.00 0.00 0.00 4.40
234 235 0.036010 CCCTCCCATACATCGCCATC 60.036 60.000 0.00 0.00 0.00 3.51
235 236 0.390340 CCTCCCATACATCGCCATCG 60.390 60.000 0.00 0.00 0.00 3.84
236 237 0.318441 CTCCCATACATCGCCATCGT 59.682 55.000 0.00 0.00 36.96 3.73
237 238 0.033366 TCCCATACATCGCCATCGTG 59.967 55.000 0.00 0.00 36.96 4.35
238 239 0.249868 CCCATACATCGCCATCGTGT 60.250 55.000 0.00 0.00 36.96 4.49
239 240 1.139989 CCATACATCGCCATCGTGTC 58.860 55.000 0.00 0.00 36.96 3.67
240 241 1.269778 CCATACATCGCCATCGTGTCT 60.270 52.381 0.00 0.00 36.96 3.41
241 242 2.473816 CATACATCGCCATCGTGTCTT 58.526 47.619 0.00 0.00 36.96 3.01
242 243 2.665649 TACATCGCCATCGTGTCTTT 57.334 45.000 0.00 0.00 36.96 2.52
243 244 1.078709 ACATCGCCATCGTGTCTTTG 58.921 50.000 0.00 0.00 36.96 2.77
244 245 1.078709 CATCGCCATCGTGTCTTTGT 58.921 50.000 0.00 0.00 36.96 2.83
245 246 1.078709 ATCGCCATCGTGTCTTTGTG 58.921 50.000 0.00 0.00 36.96 3.33
246 247 1.154413 CGCCATCGTGTCTTTGTGC 60.154 57.895 0.00 0.00 0.00 4.57
247 248 1.154413 GCCATCGTGTCTTTGTGCG 60.154 57.895 0.00 0.00 0.00 5.34
248 249 1.154413 CCATCGTGTCTTTGTGCGC 60.154 57.895 0.00 0.00 0.00 6.09
249 250 1.507713 CATCGTGTCTTTGTGCGCG 60.508 57.895 0.00 0.00 39.60 6.86
250 251 2.667318 ATCGTGTCTTTGTGCGCGG 61.667 57.895 8.83 0.00 38.87 6.46
251 252 4.368808 CGTGTCTTTGTGCGCGGG 62.369 66.667 8.83 0.00 35.31 6.13
252 253 4.683334 GTGTCTTTGTGCGCGGGC 62.683 66.667 18.81 18.81 40.52 6.13
270 271 2.253154 GCCGGCGCGTTTTTAGTT 59.747 55.556 12.58 0.00 0.00 2.24
271 272 1.496835 GCCGGCGCGTTTTTAGTTA 59.503 52.632 12.58 0.00 0.00 2.24
272 273 0.519792 GCCGGCGCGTTTTTAGTTAG 60.520 55.000 12.58 0.00 0.00 2.34
273 274 0.519792 CCGGCGCGTTTTTAGTTAGC 60.520 55.000 8.43 0.00 0.00 3.09
274 275 0.519792 CGGCGCGTTTTTAGTTAGCC 60.520 55.000 8.43 0.00 39.68 3.93
275 276 0.800631 GGCGCGTTTTTAGTTAGCCT 59.199 50.000 8.43 0.00 39.92 4.58
276 277 2.001872 GGCGCGTTTTTAGTTAGCCTA 58.998 47.619 8.43 0.00 39.92 3.93
277 278 2.416202 GGCGCGTTTTTAGTTAGCCTAA 59.584 45.455 8.43 0.00 39.92 2.69
278 279 3.064408 GGCGCGTTTTTAGTTAGCCTAAT 59.936 43.478 8.43 0.00 39.92 1.73
279 280 4.269312 GCGCGTTTTTAGTTAGCCTAATC 58.731 43.478 8.43 0.00 35.59 1.75
280 281 4.784394 GCGCGTTTTTAGTTAGCCTAATCC 60.784 45.833 8.43 0.00 35.59 3.01
281 282 4.260497 CGCGTTTTTAGTTAGCCTAATCCC 60.260 45.833 0.00 0.00 35.59 3.85
282 283 4.260497 GCGTTTTTAGTTAGCCTAATCCCG 60.260 45.833 0.00 0.00 35.59 5.14
283 284 4.271776 CGTTTTTAGTTAGCCTAATCCCGG 59.728 45.833 0.00 0.00 35.59 5.73
284 285 5.430886 GTTTTTAGTTAGCCTAATCCCGGA 58.569 41.667 0.73 0.00 35.59 5.14
285 286 5.899631 TTTTAGTTAGCCTAATCCCGGAT 57.100 39.130 0.73 0.00 35.59 4.18
286 287 5.899631 TTTAGTTAGCCTAATCCCGGATT 57.100 39.130 16.94 16.94 35.59 3.01
287 288 6.999705 TTTAGTTAGCCTAATCCCGGATTA 57.000 37.500 17.35 17.35 35.59 1.75
288 289 7.563724 TTTAGTTAGCCTAATCCCGGATTAT 57.436 36.000 18.41 8.31 35.59 1.28
289 290 5.678955 AGTTAGCCTAATCCCGGATTATC 57.321 43.478 18.41 13.53 34.57 1.75
290 291 4.470304 AGTTAGCCTAATCCCGGATTATCC 59.530 45.833 18.41 12.70 34.57 2.59
291 292 3.207044 AGCCTAATCCCGGATTATCCT 57.793 47.619 18.41 14.39 34.57 3.24
292 293 4.348020 AGCCTAATCCCGGATTATCCTA 57.652 45.455 18.41 0.40 34.57 2.94
293 294 4.695606 AGCCTAATCCCGGATTATCCTAA 58.304 43.478 18.41 0.00 34.57 2.69
294 295 5.098663 AGCCTAATCCCGGATTATCCTAAA 58.901 41.667 18.41 0.00 34.57 1.85
295 296 5.045797 AGCCTAATCCCGGATTATCCTAAAC 60.046 44.000 18.41 5.57 34.57 2.01
296 297 5.045797 GCCTAATCCCGGATTATCCTAAACT 60.046 44.000 18.41 0.00 34.57 2.66
297 298 6.641474 CCTAATCCCGGATTATCCTAAACTC 58.359 44.000 18.41 0.00 34.57 3.01
298 299 6.440965 CCTAATCCCGGATTATCCTAAACTCT 59.559 42.308 18.41 0.00 34.57 3.24
299 300 6.765355 AATCCCGGATTATCCTAAACTCTT 57.235 37.500 11.19 0.00 33.30 2.85
300 301 7.867160 AATCCCGGATTATCCTAAACTCTTA 57.133 36.000 11.19 0.00 33.30 2.10
301 302 8.450780 AATCCCGGATTATCCTAAACTCTTAT 57.549 34.615 11.19 0.00 33.30 1.73
302 303 7.867160 TCCCGGATTATCCTAAACTCTTATT 57.133 36.000 0.73 0.00 33.30 1.40
303 304 8.961293 TCCCGGATTATCCTAAACTCTTATTA 57.039 34.615 0.73 0.00 33.30 0.98
304 305 9.032624 TCCCGGATTATCCTAAACTCTTATTAG 57.967 37.037 0.73 0.00 33.30 1.73
305 306 8.813951 CCCGGATTATCCTAAACTCTTATTAGT 58.186 37.037 0.73 0.00 33.30 2.24
332 333 9.944376 TCTAATTACACTCATTTTACAGAAGCT 57.056 29.630 0.00 0.00 0.00 3.74
333 334 9.979270 CTAATTACACTCATTTTACAGAAGCTG 57.021 33.333 0.00 0.00 37.52 4.24
334 335 8.621532 AATTACACTCATTTTACAGAAGCTGA 57.378 30.769 0.82 0.00 35.18 4.26
335 336 5.931441 ACACTCATTTTACAGAAGCTGAC 57.069 39.130 0.82 0.00 35.18 3.51
336 337 4.757149 ACACTCATTTTACAGAAGCTGACC 59.243 41.667 0.82 0.00 35.18 4.02
337 338 4.756642 CACTCATTTTACAGAAGCTGACCA 59.243 41.667 0.82 0.00 35.18 4.02
338 339 5.239306 CACTCATTTTACAGAAGCTGACCAA 59.761 40.000 0.82 0.00 35.18 3.67
339 340 6.006449 ACTCATTTTACAGAAGCTGACCAAT 58.994 36.000 0.82 0.00 35.18 3.16
340 341 6.072286 ACTCATTTTACAGAAGCTGACCAATG 60.072 38.462 0.82 6.26 35.18 2.82
341 342 5.183713 TCATTTTACAGAAGCTGACCAATGG 59.816 40.000 0.00 0.00 35.18 3.16
342 343 2.787473 TACAGAAGCTGACCAATGGG 57.213 50.000 3.55 0.00 36.04 4.00
362 363 3.631250 GGTCCAGCCCTCAAATAAATCA 58.369 45.455 0.00 0.00 0.00 2.57
363 364 3.633986 GGTCCAGCCCTCAAATAAATCAG 59.366 47.826 0.00 0.00 0.00 2.90
364 365 4.273318 GTCCAGCCCTCAAATAAATCAGT 58.727 43.478 0.00 0.00 0.00 3.41
365 366 5.437060 GTCCAGCCCTCAAATAAATCAGTA 58.563 41.667 0.00 0.00 0.00 2.74
366 367 5.885912 GTCCAGCCCTCAAATAAATCAGTAA 59.114 40.000 0.00 0.00 0.00 2.24
367 368 6.377146 GTCCAGCCCTCAAATAAATCAGTAAA 59.623 38.462 0.00 0.00 0.00 2.01
368 369 6.951198 TCCAGCCCTCAAATAAATCAGTAAAA 59.049 34.615 0.00 0.00 0.00 1.52
369 370 7.453126 TCCAGCCCTCAAATAAATCAGTAAAAA 59.547 33.333 0.00 0.00 0.00 1.94
395 396 9.878599 AACGTTTCAGAAAATAGTAGAACAATG 57.121 29.630 0.00 0.00 0.00 2.82
396 397 9.268268 ACGTTTCAGAAAATAGTAGAACAATGA 57.732 29.630 0.00 0.00 0.00 2.57
397 398 9.530129 CGTTTCAGAAAATAGTAGAACAATGAC 57.470 33.333 0.00 0.00 0.00 3.06
398 399 9.827411 GTTTCAGAAAATAGTAGAACAATGACC 57.173 33.333 0.00 0.00 0.00 4.02
399 400 7.827819 TCAGAAAATAGTAGAACAATGACCG 57.172 36.000 0.00 0.00 0.00 4.79
400 401 6.816640 TCAGAAAATAGTAGAACAATGACCGG 59.183 38.462 0.00 0.00 0.00 5.28
401 402 6.594159 CAGAAAATAGTAGAACAATGACCGGT 59.406 38.462 6.92 6.92 0.00 5.28
402 403 6.817140 AGAAAATAGTAGAACAATGACCGGTC 59.183 38.462 28.17 28.17 0.00 4.79
403 404 4.667519 ATAGTAGAACAATGACCGGTCC 57.332 45.455 31.19 14.81 0.00 4.46
404 405 2.253610 AGTAGAACAATGACCGGTCCA 58.746 47.619 31.19 19.32 0.00 4.02
405 406 2.838202 AGTAGAACAATGACCGGTCCAT 59.162 45.455 31.19 20.64 0.00 3.41
406 407 4.028131 AGTAGAACAATGACCGGTCCATA 58.972 43.478 31.19 14.09 0.00 2.74
407 408 4.654262 AGTAGAACAATGACCGGTCCATAT 59.346 41.667 31.19 15.88 0.00 1.78
408 409 4.073293 AGAACAATGACCGGTCCATATC 57.927 45.455 31.19 20.98 0.00 1.63
409 410 3.711704 AGAACAATGACCGGTCCATATCT 59.288 43.478 31.19 22.67 0.00 1.98
410 411 4.899457 AGAACAATGACCGGTCCATATCTA 59.101 41.667 31.19 11.69 0.00 1.98
411 412 4.873746 ACAATGACCGGTCCATATCTAG 57.126 45.455 31.19 14.26 0.00 2.43
412 413 4.223953 ACAATGACCGGTCCATATCTAGT 58.776 43.478 31.19 14.86 0.00 2.57
413 414 4.654262 ACAATGACCGGTCCATATCTAGTT 59.346 41.667 31.19 9.28 0.00 2.24
414 415 5.130477 ACAATGACCGGTCCATATCTAGTTT 59.870 40.000 31.19 0.41 0.00 2.66
415 416 6.325545 ACAATGACCGGTCCATATCTAGTTTA 59.674 38.462 31.19 8.53 0.00 2.01
416 417 6.989155 ATGACCGGTCCATATCTAGTTTAA 57.011 37.500 31.19 8.06 0.00 1.52
417 418 6.989155 TGACCGGTCCATATCTAGTTTAAT 57.011 37.500 31.19 0.00 0.00 1.40
418 419 7.369551 TGACCGGTCCATATCTAGTTTAATT 57.630 36.000 31.19 0.00 0.00 1.40
419 420 7.798071 TGACCGGTCCATATCTAGTTTAATTT 58.202 34.615 31.19 0.00 0.00 1.82
420 421 8.269317 TGACCGGTCCATATCTAGTTTAATTTT 58.731 33.333 31.19 0.00 0.00 1.82
421 422 9.768662 GACCGGTCCATATCTAGTTTAATTTTA 57.231 33.333 24.75 0.00 0.00 1.52
441 442 8.988546 ATTTTAATTTGTATTAATTGGGGCCC 57.011 30.769 18.17 18.17 36.41 5.80
442 443 7.510675 TTTAATTTGTATTAATTGGGGCCCA 57.489 32.000 24.76 24.76 36.41 5.36
443 444 5.366482 AATTTGTATTAATTGGGGCCCAC 57.634 39.130 28.84 12.95 30.78 4.61
444 445 3.474798 TTGTATTAATTGGGGCCCACA 57.525 42.857 28.84 15.84 30.78 4.17
445 446 3.697190 TGTATTAATTGGGGCCCACAT 57.303 42.857 28.84 19.82 30.78 3.21
446 447 3.303938 TGTATTAATTGGGGCCCACATG 58.696 45.455 28.84 0.00 30.78 3.21
447 448 2.566708 ATTAATTGGGGCCCACATGT 57.433 45.000 28.84 13.29 30.78 3.21
448 449 3.697190 ATTAATTGGGGCCCACATGTA 57.303 42.857 28.84 11.36 30.78 2.29
449 450 3.474798 TTAATTGGGGCCCACATGTAA 57.525 42.857 28.84 17.50 30.78 2.41
450 451 1.864669 AATTGGGGCCCACATGTAAG 58.135 50.000 28.84 0.00 30.78 2.34
451 452 0.709992 ATTGGGGCCCACATGTAAGT 59.290 50.000 28.84 0.00 30.78 2.24
452 453 0.251564 TTGGGGCCCACATGTAAGTG 60.252 55.000 28.84 0.00 39.21 3.16
453 454 1.136961 TGGGGCCCACATGTAAGTGA 61.137 55.000 24.76 0.00 42.05 3.41
454 455 0.679960 GGGGCCCACATGTAAGTGAC 60.680 60.000 26.86 0.00 42.05 3.67
455 456 0.037590 GGGCCCACATGTAAGTGACA 59.962 55.000 19.95 0.00 42.05 3.58
456 457 1.165270 GGCCCACATGTAAGTGACAC 58.835 55.000 0.00 0.00 42.17 3.67
457 458 1.544537 GGCCCACATGTAAGTGACACA 60.545 52.381 8.59 0.00 42.17 3.72
458 459 2.436417 GCCCACATGTAAGTGACACAT 58.564 47.619 8.59 0.00 42.17 3.21
464 465 2.472695 TGTAAGTGACACATGGAGGC 57.527 50.000 8.59 0.00 31.20 4.70
465 466 1.977854 TGTAAGTGACACATGGAGGCT 59.022 47.619 8.59 0.00 31.20 4.58
466 467 2.289631 TGTAAGTGACACATGGAGGCTG 60.290 50.000 8.59 0.00 31.20 4.85
467 468 0.037303 AAGTGACACATGGAGGCTGG 59.963 55.000 8.59 0.00 0.00 4.85
468 469 1.377725 GTGACACATGGAGGCTGGG 60.378 63.158 0.00 0.00 0.00 4.45
469 470 2.439156 GACACATGGAGGCTGGGC 60.439 66.667 0.00 0.00 0.00 5.36
470 471 3.259314 ACACATGGAGGCTGGGCA 61.259 61.111 0.00 0.00 0.00 5.36
471 472 2.036098 CACATGGAGGCTGGGCAA 59.964 61.111 0.00 0.00 0.00 4.52
472 473 1.607178 CACATGGAGGCTGGGCAAA 60.607 57.895 0.00 0.00 0.00 3.68
473 474 1.155859 ACATGGAGGCTGGGCAAAA 59.844 52.632 0.00 0.00 0.00 2.44
474 475 0.252375 ACATGGAGGCTGGGCAAAAT 60.252 50.000 0.00 0.00 0.00 1.82
475 476 0.177141 CATGGAGGCTGGGCAAAATG 59.823 55.000 0.00 0.00 0.00 2.32
476 477 1.619807 ATGGAGGCTGGGCAAAATGC 61.620 55.000 0.00 0.00 44.08 3.56
487 488 2.477845 GCAAAATGCCCAGGAAATGT 57.522 45.000 0.00 0.00 37.42 2.71
488 489 2.349590 GCAAAATGCCCAGGAAATGTC 58.650 47.619 0.00 0.00 37.42 3.06
489 490 2.936553 GCAAAATGCCCAGGAAATGTCC 60.937 50.000 0.00 0.00 40.02 4.02
500 501 3.277142 GGAAATGTCCGGTAGATGGTT 57.723 47.619 0.00 0.00 33.05 3.67
501 502 4.411256 GGAAATGTCCGGTAGATGGTTA 57.589 45.455 0.00 0.00 33.05 2.85
502 503 4.773013 GGAAATGTCCGGTAGATGGTTAA 58.227 43.478 0.00 0.00 33.05 2.01
503 504 5.187687 GGAAATGTCCGGTAGATGGTTAAA 58.812 41.667 0.00 0.00 33.05 1.52
504 505 5.296035 GGAAATGTCCGGTAGATGGTTAAAG 59.704 44.000 0.00 0.00 33.05 1.85
505 506 3.899052 TGTCCGGTAGATGGTTAAAGG 57.101 47.619 0.00 0.00 0.00 3.11
506 507 2.093341 TGTCCGGTAGATGGTTAAAGGC 60.093 50.000 0.00 0.00 0.00 4.35
507 508 1.487558 TCCGGTAGATGGTTAAAGGCC 59.512 52.381 0.00 0.00 0.00 5.19
508 509 1.489230 CCGGTAGATGGTTAAAGGCCT 59.511 52.381 0.00 0.00 0.00 5.19
509 510 2.092592 CCGGTAGATGGTTAAAGGCCTT 60.093 50.000 13.78 13.78 0.00 4.35
510 511 3.617284 CGGTAGATGGTTAAAGGCCTTT 58.383 45.455 32.37 32.37 36.63 3.11
511 512 3.377172 CGGTAGATGGTTAAAGGCCTTTG 59.623 47.826 35.99 14.18 34.23 2.77
512 513 3.130516 GGTAGATGGTTAAAGGCCTTTGC 59.869 47.826 35.99 27.18 34.23 3.68
513 514 2.888212 AGATGGTTAAAGGCCTTTGCA 58.112 42.857 35.99 21.82 40.13 4.08
514 515 2.562738 AGATGGTTAAAGGCCTTTGCAC 59.437 45.455 35.99 29.53 40.13 4.57
515 516 0.671251 TGGTTAAAGGCCTTTGCACG 59.329 50.000 35.99 0.00 40.13 5.34
516 517 0.038618 GGTTAAAGGCCTTTGCACGG 60.039 55.000 35.99 0.00 40.13 4.94
517 518 0.955905 GTTAAAGGCCTTTGCACGGA 59.044 50.000 35.99 15.93 40.13 4.69
518 519 1.544246 GTTAAAGGCCTTTGCACGGAT 59.456 47.619 35.99 13.74 40.13 4.18
519 520 1.173043 TAAAGGCCTTTGCACGGATG 58.827 50.000 35.99 0.00 40.13 3.51
520 521 1.535204 AAAGGCCTTTGCACGGATGG 61.535 55.000 29.91 0.00 40.13 3.51
521 522 2.361104 GGCCTTTGCACGGATGGA 60.361 61.111 5.42 0.00 40.13 3.41
522 523 1.976474 GGCCTTTGCACGGATGGAA 60.976 57.895 5.42 0.00 40.13 3.53
523 524 1.531739 GGCCTTTGCACGGATGGAAA 61.532 55.000 5.42 0.00 43.13 3.13
524 525 0.388520 GCCTTTGCACGGATGGAAAC 60.389 55.000 5.42 0.00 40.80 2.78
525 526 0.109781 CCTTTGCACGGATGGAAACG 60.110 55.000 0.00 0.00 40.80 3.60
526 527 0.109781 CTTTGCACGGATGGAAACGG 60.110 55.000 0.00 0.00 40.80 4.44
527 528 0.535328 TTTGCACGGATGGAAACGGA 60.535 50.000 0.00 0.00 40.80 4.69
528 529 0.535328 TTGCACGGATGGAAACGGAA 60.535 50.000 0.00 0.00 32.51 4.30
529 530 1.231958 TGCACGGATGGAAACGGAAC 61.232 55.000 0.00 0.00 0.00 3.62
530 531 1.231958 GCACGGATGGAAACGGAACA 61.232 55.000 0.00 0.00 0.00 3.18
531 532 0.796312 CACGGATGGAAACGGAACAG 59.204 55.000 0.00 0.00 0.00 3.16
532 533 0.682852 ACGGATGGAAACGGAACAGA 59.317 50.000 0.00 0.00 0.00 3.41
533 534 1.071071 ACGGATGGAAACGGAACAGAA 59.929 47.619 0.00 0.00 0.00 3.02
534 535 1.732259 CGGATGGAAACGGAACAGAAG 59.268 52.381 0.00 0.00 0.00 2.85
535 536 2.611971 CGGATGGAAACGGAACAGAAGA 60.612 50.000 0.00 0.00 0.00 2.87
536 537 3.003480 GGATGGAAACGGAACAGAAGAG 58.997 50.000 0.00 0.00 0.00 2.85
537 538 1.878953 TGGAAACGGAACAGAAGAGC 58.121 50.000 0.00 0.00 0.00 4.09
538 539 1.140052 TGGAAACGGAACAGAAGAGCA 59.860 47.619 0.00 0.00 0.00 4.26
539 540 2.224523 TGGAAACGGAACAGAAGAGCAT 60.225 45.455 0.00 0.00 0.00 3.79
540 541 2.814336 GGAAACGGAACAGAAGAGCATT 59.186 45.455 0.00 0.00 0.00 3.56
541 542 3.253432 GGAAACGGAACAGAAGAGCATTT 59.747 43.478 0.00 0.00 0.00 2.32
542 543 4.467735 GAAACGGAACAGAAGAGCATTTC 58.532 43.478 0.00 0.00 0.00 2.17
543 544 3.409026 ACGGAACAGAAGAGCATTTCT 57.591 42.857 0.00 0.00 37.90 2.52
544 545 4.537135 ACGGAACAGAAGAGCATTTCTA 57.463 40.909 2.84 0.00 35.70 2.10
545 546 5.091261 ACGGAACAGAAGAGCATTTCTAT 57.909 39.130 2.84 0.00 35.70 1.98
546 547 6.222038 ACGGAACAGAAGAGCATTTCTATA 57.778 37.500 2.84 0.00 35.70 1.31
547 548 6.640518 ACGGAACAGAAGAGCATTTCTATAA 58.359 36.000 2.84 0.00 35.70 0.98
548 549 6.758886 ACGGAACAGAAGAGCATTTCTATAAG 59.241 38.462 2.84 0.00 35.70 1.73
549 550 6.980978 CGGAACAGAAGAGCATTTCTATAAGA 59.019 38.462 2.84 0.00 35.70 2.10
550 551 7.655328 CGGAACAGAAGAGCATTTCTATAAGAT 59.345 37.037 2.84 0.00 35.70 2.40
551 552 8.987890 GGAACAGAAGAGCATTTCTATAAGATC 58.012 37.037 2.84 0.00 35.70 2.75
552 553 9.539825 GAACAGAAGAGCATTTCTATAAGATCA 57.460 33.333 0.00 0.00 35.70 2.92
553 554 8.885494 ACAGAAGAGCATTTCTATAAGATCAC 57.115 34.615 0.00 0.00 35.70 3.06
554 555 8.703743 ACAGAAGAGCATTTCTATAAGATCACT 58.296 33.333 0.00 0.00 35.70 3.41
555 556 9.545105 CAGAAGAGCATTTCTATAAGATCACTT 57.455 33.333 0.00 0.00 35.70 3.16
559 560 9.469807 AGAGCATTTCTATAAGATCACTTAACG 57.530 33.333 0.00 0.00 41.15 3.18
560 561 8.594881 AGCATTTCTATAAGATCACTTAACGG 57.405 34.615 0.00 0.00 41.15 4.44
561 562 7.171678 AGCATTTCTATAAGATCACTTAACGGC 59.828 37.037 0.00 0.00 41.15 5.68
562 563 7.042051 GCATTTCTATAAGATCACTTAACGGCA 60.042 37.037 0.00 0.00 41.15 5.69
563 564 8.491152 CATTTCTATAAGATCACTTAACGGCAG 58.509 37.037 0.00 0.00 41.15 4.85
564 565 6.954487 TCTATAAGATCACTTAACGGCAGA 57.046 37.500 0.00 0.00 41.15 4.26
565 566 6.971602 TCTATAAGATCACTTAACGGCAGAG 58.028 40.000 0.00 0.00 41.15 3.35
566 567 2.969628 AGATCACTTAACGGCAGAGG 57.030 50.000 0.00 0.00 0.00 3.69
567 568 1.482593 AGATCACTTAACGGCAGAGGG 59.517 52.381 0.00 0.00 0.00 4.30
568 569 0.541863 ATCACTTAACGGCAGAGGGG 59.458 55.000 0.00 0.00 0.00 4.79
569 570 0.834687 TCACTTAACGGCAGAGGGGT 60.835 55.000 0.00 0.00 0.00 4.95
570 571 0.899720 CACTTAACGGCAGAGGGGTA 59.100 55.000 0.00 0.00 0.00 3.69
571 572 1.276989 CACTTAACGGCAGAGGGGTAA 59.723 52.381 0.00 0.00 0.00 2.85
572 573 1.980036 ACTTAACGGCAGAGGGGTAAA 59.020 47.619 0.00 0.00 0.00 2.01
573 574 2.027469 ACTTAACGGCAGAGGGGTAAAG 60.027 50.000 0.00 0.00 0.00 1.85
574 575 1.648116 TAACGGCAGAGGGGTAAAGT 58.352 50.000 0.00 0.00 0.00 2.66
575 576 0.769247 AACGGCAGAGGGGTAAAGTT 59.231 50.000 0.00 0.00 0.00 2.66
576 577 1.648116 ACGGCAGAGGGGTAAAGTTA 58.352 50.000 0.00 0.00 0.00 2.24
577 578 1.980036 ACGGCAGAGGGGTAAAGTTAA 59.020 47.619 0.00 0.00 0.00 2.01
578 579 2.027469 ACGGCAGAGGGGTAAAGTTAAG 60.027 50.000 0.00 0.00 0.00 1.85
579 580 2.366533 GGCAGAGGGGTAAAGTTAAGC 58.633 52.381 0.00 0.00 0.00 3.09
580 581 2.290705 GGCAGAGGGGTAAAGTTAAGCA 60.291 50.000 0.00 0.00 0.00 3.91
581 582 3.621558 GCAGAGGGGTAAAGTTAAGCAT 58.378 45.455 0.00 0.00 0.00 3.79
582 583 3.378427 GCAGAGGGGTAAAGTTAAGCATG 59.622 47.826 0.00 0.00 0.00 4.06
583 584 3.378427 CAGAGGGGTAAAGTTAAGCATGC 59.622 47.826 10.51 10.51 0.00 4.06
584 585 3.267031 AGAGGGGTAAAGTTAAGCATGCT 59.733 43.478 16.30 16.30 0.00 3.79
585 586 4.017126 GAGGGGTAAAGTTAAGCATGCTT 58.983 43.478 33.70 33.70 39.83 3.91
586 587 4.017126 AGGGGTAAAGTTAAGCATGCTTC 58.983 43.478 35.10 22.04 37.47 3.86
587 588 3.181500 GGGGTAAAGTTAAGCATGCTTCG 60.181 47.826 35.10 0.00 37.47 3.79
588 589 3.687698 GGGTAAAGTTAAGCATGCTTCGA 59.312 43.478 35.10 22.16 37.47 3.71
589 590 4.155280 GGGTAAAGTTAAGCATGCTTCGAA 59.845 41.667 35.10 22.34 37.47 3.71
590 591 5.335348 GGGTAAAGTTAAGCATGCTTCGAAA 60.335 40.000 35.10 21.61 37.47 3.46
591 592 6.322491 GGTAAAGTTAAGCATGCTTCGAAAT 58.678 36.000 35.10 21.37 37.47 2.17
592 593 6.806739 GGTAAAGTTAAGCATGCTTCGAAATT 59.193 34.615 35.10 25.42 37.47 1.82
593 594 7.966204 GGTAAAGTTAAGCATGCTTCGAAATTA 59.034 33.333 35.10 23.21 37.47 1.40
594 595 9.000018 GTAAAGTTAAGCATGCTTCGAAATTAG 58.000 33.333 35.10 0.00 37.47 1.73
595 596 6.124088 AGTTAAGCATGCTTCGAAATTAGG 57.876 37.500 35.10 0.00 37.47 2.69
596 597 3.427161 AAGCATGCTTCGAAATTAGGC 57.573 42.857 27.21 1.94 0.00 3.93
597 598 1.331756 AGCATGCTTCGAAATTAGGCG 59.668 47.619 16.30 0.00 0.00 5.52
598 599 1.064060 GCATGCTTCGAAATTAGGCGT 59.936 47.619 11.37 0.00 0.00 5.68
599 600 2.286833 GCATGCTTCGAAATTAGGCGTA 59.713 45.455 11.37 0.00 0.00 4.42
600 601 3.242608 GCATGCTTCGAAATTAGGCGTAA 60.243 43.478 11.37 0.64 0.00 3.18
601 602 4.729458 GCATGCTTCGAAATTAGGCGTAAA 60.729 41.667 11.37 0.00 0.00 2.01
602 603 5.510671 CATGCTTCGAAATTAGGCGTAAAT 58.489 37.500 2.52 0.00 0.00 1.40
603 604 5.554822 TGCTTCGAAATTAGGCGTAAATT 57.445 34.783 2.52 0.77 0.00 1.82
604 605 5.945155 TGCTTCGAAATTAGGCGTAAATTT 58.055 33.333 2.52 2.76 38.82 1.82
605 606 5.797934 TGCTTCGAAATTAGGCGTAAATTTG 59.202 36.000 2.52 5.51 36.82 2.32
606 607 6.025280 GCTTCGAAATTAGGCGTAAATTTGA 58.975 36.000 11.25 11.25 36.82 2.69
607 608 6.194692 GCTTCGAAATTAGGCGTAAATTTGAG 59.805 38.462 13.78 10.63 36.82 3.02
608 609 6.730960 TCGAAATTAGGCGTAAATTTGAGT 57.269 33.333 11.25 0.00 36.82 3.41
609 610 7.830940 TCGAAATTAGGCGTAAATTTGAGTA 57.169 32.000 11.25 0.00 36.82 2.59
610 611 7.902032 TCGAAATTAGGCGTAAATTTGAGTAG 58.098 34.615 11.25 0.00 36.82 2.57
611 612 7.010738 TCGAAATTAGGCGTAAATTTGAGTAGG 59.989 37.037 11.25 0.00 36.82 3.18
612 613 7.201582 CGAAATTAGGCGTAAATTTGAGTAGGT 60.202 37.037 8.03 0.00 36.82 3.08
613 614 6.920569 ATTAGGCGTAAATTTGAGTAGGTG 57.079 37.500 2.52 0.00 0.00 4.00
614 615 3.606687 AGGCGTAAATTTGAGTAGGTGG 58.393 45.455 0.00 0.00 0.00 4.61
615 616 3.008704 AGGCGTAAATTTGAGTAGGTGGT 59.991 43.478 0.00 0.00 0.00 4.16
616 617 3.754850 GGCGTAAATTTGAGTAGGTGGTT 59.245 43.478 0.00 0.00 0.00 3.67
617 618 4.142752 GGCGTAAATTTGAGTAGGTGGTTC 60.143 45.833 0.00 0.00 0.00 3.62
618 619 4.435121 GCGTAAATTTGAGTAGGTGGTTCG 60.435 45.833 0.00 0.00 0.00 3.95
619 620 4.925054 CGTAAATTTGAGTAGGTGGTTCGA 59.075 41.667 0.00 0.00 0.00 3.71
620 621 5.061808 CGTAAATTTGAGTAGGTGGTTCGAG 59.938 44.000 0.00 0.00 0.00 4.04
621 622 4.618920 AATTTGAGTAGGTGGTTCGAGT 57.381 40.909 0.00 0.00 0.00 4.18
622 623 4.618920 ATTTGAGTAGGTGGTTCGAGTT 57.381 40.909 0.00 0.00 0.00 3.01
623 624 5.733620 ATTTGAGTAGGTGGTTCGAGTTA 57.266 39.130 0.00 0.00 0.00 2.24
624 625 4.778534 TTGAGTAGGTGGTTCGAGTTAG 57.221 45.455 0.00 0.00 0.00 2.34
625 626 3.087031 TGAGTAGGTGGTTCGAGTTAGG 58.913 50.000 0.00 0.00 0.00 2.69
626 627 3.087781 GAGTAGGTGGTTCGAGTTAGGT 58.912 50.000 0.00 0.00 0.00 3.08
627 628 3.087781 AGTAGGTGGTTCGAGTTAGGTC 58.912 50.000 0.00 0.00 0.00 3.85
628 629 1.264295 AGGTGGTTCGAGTTAGGTCC 58.736 55.000 0.00 0.00 0.00 4.46
629 630 0.971386 GGTGGTTCGAGTTAGGTCCA 59.029 55.000 0.00 0.00 0.00 4.02
630 631 1.067071 GGTGGTTCGAGTTAGGTCCAG 60.067 57.143 0.00 0.00 0.00 3.86
631 632 1.891150 GTGGTTCGAGTTAGGTCCAGA 59.109 52.381 0.00 0.00 0.00 3.86
632 633 2.298163 GTGGTTCGAGTTAGGTCCAGAA 59.702 50.000 0.00 0.00 0.00 3.02
633 634 2.967201 TGGTTCGAGTTAGGTCCAGAAA 59.033 45.455 0.00 0.00 0.00 2.52
634 635 3.581332 TGGTTCGAGTTAGGTCCAGAAAT 59.419 43.478 0.00 0.00 0.00 2.17
635 636 3.933332 GGTTCGAGTTAGGTCCAGAAATG 59.067 47.826 0.00 0.00 0.00 2.32
636 637 3.247006 TCGAGTTAGGTCCAGAAATGC 57.753 47.619 0.00 0.00 0.00 3.56
637 638 2.565391 TCGAGTTAGGTCCAGAAATGCA 59.435 45.455 0.00 0.00 0.00 3.96
638 639 3.007506 TCGAGTTAGGTCCAGAAATGCAA 59.992 43.478 0.00 0.00 0.00 4.08
639 640 3.751175 CGAGTTAGGTCCAGAAATGCAAA 59.249 43.478 0.00 0.00 0.00 3.68
640 641 4.396166 CGAGTTAGGTCCAGAAATGCAAAT 59.604 41.667 0.00 0.00 0.00 2.32
641 642 5.644644 GAGTTAGGTCCAGAAATGCAAATG 58.355 41.667 0.00 0.00 0.00 2.32
642 643 5.324409 AGTTAGGTCCAGAAATGCAAATGA 58.676 37.500 0.00 0.00 0.00 2.57
643 644 5.183904 AGTTAGGTCCAGAAATGCAAATGAC 59.816 40.000 0.00 0.00 0.00 3.06
644 645 2.827921 AGGTCCAGAAATGCAAATGACC 59.172 45.455 11.15 11.15 0.00 4.02
645 646 2.094026 GGTCCAGAAATGCAAATGACCC 60.094 50.000 0.00 0.00 0.00 4.46
646 647 2.562298 GTCCAGAAATGCAAATGACCCA 59.438 45.455 0.00 0.00 0.00 4.51
647 648 3.006752 GTCCAGAAATGCAAATGACCCAA 59.993 43.478 0.00 0.00 0.00 4.12
648 649 3.839490 TCCAGAAATGCAAATGACCCAAT 59.161 39.130 0.00 0.00 0.00 3.16
649 650 5.022122 TCCAGAAATGCAAATGACCCAATA 58.978 37.500 0.00 0.00 0.00 1.90
650 651 5.127519 TCCAGAAATGCAAATGACCCAATAG 59.872 40.000 0.00 0.00 0.00 1.73
655 656 8.156165 AGAAATGCAAATGACCCAATAGAAAAA 58.844 29.630 0.00 0.00 0.00 1.94
678 679 0.466555 AAGTAGTGGTGCCGGCAAAA 60.467 50.000 34.66 20.34 0.00 2.44
684 685 2.501610 GTGCCGGCAAAACCCAAA 59.498 55.556 34.66 0.58 33.26 3.28
773 774 0.245539 CACCCGGATAACTGTCACGT 59.754 55.000 0.73 0.00 0.00 4.49
774 775 1.473677 CACCCGGATAACTGTCACGTA 59.526 52.381 0.73 0.00 0.00 3.57
775 776 1.474077 ACCCGGATAACTGTCACGTAC 59.526 52.381 0.73 0.00 0.00 3.67
942 950 1.656652 CAGCACGAAATCCCTCGATT 58.343 50.000 0.00 0.00 41.44 3.34
974 982 2.474410 TCGAAGCTTTTCTTCCTCCC 57.526 50.000 0.00 0.00 46.60 4.30
1145 1153 1.511768 GCCGCCTTCTCTCTACGTT 59.488 57.895 0.00 0.00 0.00 3.99
1485 1493 4.681978 GTGGCAGCGAACGACCCT 62.682 66.667 0.00 0.00 0.00 4.34
1542 1550 0.617935 TCATCAGGGATTTCGTGCCA 59.382 50.000 0.00 0.00 41.63 4.92
1782 1953 2.681848 GTGATGGCAGAGGAAATGTCTG 59.318 50.000 0.00 0.00 43.77 3.51
2273 2447 7.560991 TGATTTGAATATATTGCACCTTCCACT 59.439 33.333 1.78 0.00 0.00 4.00
2351 2525 8.745590 ACAGTACTGTGTTAAATTTGGAAGTTT 58.254 29.630 27.41 0.00 43.11 2.66
2403 2577 2.936919 TGAGTGCAGTCCATGACTTT 57.063 45.000 18.82 0.00 41.37 2.66
2456 2630 2.584608 GCCATACGGGTGACTGCT 59.415 61.111 0.00 0.00 41.93 4.24
2621 2797 4.790140 GTGTTATTTTCTCTCGCTTGCATG 59.210 41.667 0.00 0.00 0.00 4.06
2816 2992 2.837591 TGCTAGAGGTACATTGGCAAGA 59.162 45.455 5.96 0.00 0.00 3.02
2831 3007 3.135712 TGGCAAGACAAGAAACTGACCTA 59.864 43.478 0.00 0.00 0.00 3.08
2846 3023 4.202770 ACTGACCTATCTCTGCCTATCCAT 60.203 45.833 0.00 0.00 0.00 3.41
3113 3290 1.202770 GGTTGCTGGTGACCTTACAGT 60.203 52.381 2.11 0.00 34.79 3.55
3215 3394 3.776616 GCCAAGAGCTCATAGCAGT 57.223 52.632 17.77 0.00 45.56 4.40
3228 3407 3.637229 TCATAGCAGTACTGTAAGAGGCC 59.363 47.826 23.44 0.00 37.43 5.19
3258 3437 4.440112 GGAAACGAAGGGCAAAGATAATGG 60.440 45.833 0.00 0.00 0.00 3.16
3259 3438 2.654863 ACGAAGGGCAAAGATAATGGG 58.345 47.619 0.00 0.00 0.00 4.00
3375 3554 1.173913 GTGCGGCCCTTGTAGAAAAT 58.826 50.000 0.00 0.00 0.00 1.82
3377 3556 1.004277 TGCGGCCCTTGTAGAAAATCT 59.996 47.619 0.00 0.00 0.00 2.40
3473 3652 0.322546 GGGCCCGTTCAATGAAGAGT 60.323 55.000 5.69 0.00 0.00 3.24
3477 3656 3.312697 GGCCCGTTCAATGAAGAGTAATC 59.687 47.826 0.00 0.00 0.00 1.75
3548 3727 2.503356 AGTGCAGGAGTAATAGCTGCTT 59.497 45.455 7.79 0.00 41.16 3.91
3607 3786 3.409384 GCAGGGGCTCTTCCTCTT 58.591 61.111 0.00 0.00 45.84 2.85
3643 3822 3.054361 AGAGAGAACAGGGAGAGAGAGAC 60.054 52.174 0.00 0.00 0.00 3.36
3651 3838 1.209990 GGGAGAGAGAGACGAGGTACA 59.790 57.143 0.00 0.00 0.00 2.90
3706 3893 1.077930 ATCTCATTGCCACAGCGCT 60.078 52.632 2.64 2.64 44.31 5.92
3813 4000 9.525007 CTGTTTAAGAACGTATGTATGTTTGTC 57.475 33.333 0.00 0.00 38.65 3.18
3910 4099 4.492570 CGTGCCTGAAAAGAAAGCGTATAG 60.493 45.833 0.00 0.00 0.00 1.31
4053 4245 6.601741 TTGCACCATTTGACTTCAATTTTC 57.398 33.333 0.00 0.00 35.55 2.29
4056 4248 6.822676 TGCACCATTTGACTTCAATTTTCTTT 59.177 30.769 0.00 0.00 35.55 2.52
4057 4249 7.011295 TGCACCATTTGACTTCAATTTTCTTTC 59.989 33.333 0.00 0.00 35.55 2.62
4058 4250 7.558137 CACCATTTGACTTCAATTTTCTTTCG 58.442 34.615 0.00 0.00 35.55 3.46
4059 4251 7.222611 CACCATTTGACTTCAATTTTCTTTCGT 59.777 33.333 0.00 0.00 35.55 3.85
4060 4252 7.435192 ACCATTTGACTTCAATTTTCTTTCGTC 59.565 33.333 0.00 0.00 35.55 4.20
4148 4340 6.648310 CCATAATGTCAGCTGTTATGACCTAG 59.352 42.308 25.76 12.42 45.24 3.02
4234 4426 4.269183 TCATGTTACCATTAGCACCAAGG 58.731 43.478 0.00 0.00 0.00 3.61
4402 4594 6.446318 TCAAAACAATGAAATGCTGTCCTAC 58.554 36.000 0.00 0.00 0.00 3.18
4426 4618 8.902540 ACAGTTACATCTTTCAGTCACAATAA 57.097 30.769 0.00 0.00 0.00 1.40
4562 4754 2.545526 CTCCATCATTCAATTCCGGACG 59.454 50.000 1.83 0.00 0.00 4.79
4578 4770 6.387041 TCCGGACGCTATATAATTGGATAG 57.613 41.667 0.00 0.00 0.00 2.08
4859 5181 4.873827 TGAATAGCGTCCTGTGAAATAACC 59.126 41.667 0.00 0.00 0.00 2.85
4882 5204 6.378280 ACCACAGAGTTGATTTTCTCTTTGTT 59.622 34.615 0.00 0.00 38.74 2.83
4932 5254 3.798202 AGCGATGTTTCTGGAAGTATCC 58.202 45.455 0.00 0.00 46.76 2.59
5166 5488 3.749609 GCTTGTGTTATACCTTTGACGGT 59.250 43.478 0.00 0.00 41.10 4.83
5252 5574 6.769512 TCTACTGAGGGCATATGGTAAAATC 58.230 40.000 4.56 0.00 0.00 2.17
5267 5589 4.816925 GGTAAAATCACTGGAGACTATGCC 59.183 45.833 0.00 0.00 0.00 4.40
5440 5762 7.510685 TGAGATCCAGGTAAGCTAATCTTGTAT 59.489 37.037 0.00 0.00 36.25 2.29
5481 5803 5.464389 GTCAAGTTTCGTGTGGTAGTTATGT 59.536 40.000 0.00 0.00 0.00 2.29
5482 5804 5.464057 TCAAGTTTCGTGTGGTAGTTATGTG 59.536 40.000 0.00 0.00 0.00 3.21
5497 5819 4.141251 AGTTATGTGGCCTTATGGGGTAAG 60.141 45.833 3.32 0.00 39.63 2.34
5505 5827 4.164413 GGCCTTATGGGGTAAGAGGATATC 59.836 50.000 0.00 0.00 41.99 1.63
6133 6455 5.124457 GGAGTACGAGGAATGGCGTATTATA 59.876 44.000 0.00 0.00 43.72 0.98
6240 6562 3.381272 TCTGGTGCTTATTATGCTTTGCC 59.619 43.478 3.56 2.25 0.00 4.52
6254 6578 2.560105 GCTTTGCCCAAGAACTGAATCT 59.440 45.455 0.00 0.00 33.80 2.40
6255 6579 3.366781 GCTTTGCCCAAGAACTGAATCTC 60.367 47.826 0.00 0.00 33.80 2.75
6437 6764 5.999205 ATTCATTGCCAGTATTGACCAAA 57.001 34.783 0.00 0.00 0.00 3.28
6442 6769 4.782019 TGCCAGTATTGACCAAATTGTC 57.218 40.909 0.00 0.00 35.77 3.18
6469 6796 9.612066 TTCTTTTGGTATTTCTCTTGCAAAAAT 57.388 25.926 11.29 11.29 0.00 1.82
6997 7324 5.010719 CAGGTCTCAAGTCCTTGTGTAGTTA 59.989 44.000 6.90 0.00 41.16 2.24
7544 7899 6.516693 GCACCTAACAGAGCAGGTAAATTTTT 60.517 38.462 0.00 0.00 43.45 1.94
7558 7916 9.331282 CAGGTAAATTTTTATCTCTGGAGTAGG 57.669 37.037 0.00 0.00 31.96 3.18
7617 7975 3.130340 GCTTTGAACAAACCCAGACTCAA 59.870 43.478 0.00 0.00 0.00 3.02
7618 7976 4.734695 GCTTTGAACAAACCCAGACTCAAG 60.735 45.833 0.00 0.00 0.00 3.02
7619 7977 3.644966 TGAACAAACCCAGACTCAAGT 57.355 42.857 0.00 0.00 0.00 3.16
7620 7978 3.541632 TGAACAAACCCAGACTCAAGTC 58.458 45.455 1.79 1.79 45.08 3.01
7710 8068 0.322975 ATGGTGACCACTGAGTCTGC 59.677 55.000 6.40 0.00 35.80 4.26
7744 8103 2.885676 CGCGCTTCAGTTGCACAGT 61.886 57.895 5.56 0.00 0.00 3.55
7745 8104 1.356624 GCGCTTCAGTTGCACAGTT 59.643 52.632 0.00 0.00 0.00 3.16
7781 8145 4.807304 ACGTAGGTGTTCTGTTACTGTTTG 59.193 41.667 0.00 0.00 0.00 2.93
7914 8281 5.008712 TCTGCCATCTAGTATGTCTTGTACG 59.991 44.000 0.00 0.00 0.00 3.67
8036 8403 1.686052 GGGACTCTAGGATCTGCAGTG 59.314 57.143 14.67 0.00 0.00 3.66
8138 9129 1.148273 TGAACACAGTGGTCCAGGC 59.852 57.895 16.33 0.00 31.76 4.85
8166 9157 1.412343 CCTTGAACAAAACCTGGTGGG 59.588 52.381 0.00 0.00 41.89 4.61
8238 9232 7.156876 TCTTTTGAAAAGCATGGTATGGTAG 57.843 36.000 12.62 0.00 40.65 3.18
8239 9233 5.913137 TTTGAAAAGCATGGTATGGTAGG 57.087 39.130 0.00 0.00 40.65 3.18
8240 9234 4.853468 TGAAAAGCATGGTATGGTAGGA 57.147 40.909 0.00 0.00 40.65 2.94
8241 9235 4.780815 TGAAAAGCATGGTATGGTAGGAG 58.219 43.478 0.00 0.00 40.65 3.69
8323 9347 7.409874 CGAGCTATAGCAATGTAATCTCGTTTC 60.410 40.741 26.07 8.21 45.16 2.78
8334 9358 6.860080 TGTAATCTCGTTTCGAAATACTCCT 58.140 36.000 14.69 1.18 34.74 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.408969 AGGAGGAGATTTCGGAGCTC 58.591 55.000 4.71 4.71 0.00 4.09
1 2 2.757894 TAGGAGGAGATTTCGGAGCT 57.242 50.000 0.00 0.00 0.00 4.09
2 3 3.118738 TGTTTAGGAGGAGATTTCGGAGC 60.119 47.826 0.00 0.00 0.00 4.70
3 4 4.737855 TGTTTAGGAGGAGATTTCGGAG 57.262 45.455 0.00 0.00 0.00 4.63
4 5 4.101119 GGATGTTTAGGAGGAGATTTCGGA 59.899 45.833 0.00 0.00 0.00 4.55
6 7 5.283457 AGGATGTTTAGGAGGAGATTTCG 57.717 43.478 0.00 0.00 0.00 3.46
7 8 5.755861 CGAAGGATGTTTAGGAGGAGATTTC 59.244 44.000 0.00 0.00 0.00 2.17
9 10 4.443598 GCGAAGGATGTTTAGGAGGAGATT 60.444 45.833 0.00 0.00 0.00 2.40
11 12 2.431057 GCGAAGGATGTTTAGGAGGAGA 59.569 50.000 0.00 0.00 0.00 3.71
12 13 2.483889 GGCGAAGGATGTTTAGGAGGAG 60.484 54.545 0.00 0.00 0.00 3.69
13 14 1.485066 GGCGAAGGATGTTTAGGAGGA 59.515 52.381 0.00 0.00 0.00 3.71
14 15 1.486726 AGGCGAAGGATGTTTAGGAGG 59.513 52.381 0.00 0.00 0.00 4.30
15 16 2.555199 CAGGCGAAGGATGTTTAGGAG 58.445 52.381 0.00 0.00 0.00 3.69
16 17 1.406887 GCAGGCGAAGGATGTTTAGGA 60.407 52.381 0.00 0.00 0.00 2.94
17 18 1.017387 GCAGGCGAAGGATGTTTAGG 58.983 55.000 0.00 0.00 0.00 2.69
18 19 1.936547 GAGCAGGCGAAGGATGTTTAG 59.063 52.381 0.00 0.00 0.00 1.85
19 20 1.406887 GGAGCAGGCGAAGGATGTTTA 60.407 52.381 0.00 0.00 0.00 2.01
20 21 0.678048 GGAGCAGGCGAAGGATGTTT 60.678 55.000 0.00 0.00 0.00 2.83
21 22 1.078143 GGAGCAGGCGAAGGATGTT 60.078 57.895 0.00 0.00 0.00 2.71
22 23 2.586792 GGAGCAGGCGAAGGATGT 59.413 61.111 0.00 0.00 0.00 3.06
23 24 2.203126 GGGAGCAGGCGAAGGATG 60.203 66.667 0.00 0.00 0.00 3.51
24 25 3.854669 CGGGAGCAGGCGAAGGAT 61.855 66.667 0.00 0.00 0.00 3.24
26 27 2.028125 TAATCGGGAGCAGGCGAAGG 62.028 60.000 0.00 0.00 0.00 3.46
27 28 0.034059 ATAATCGGGAGCAGGCGAAG 59.966 55.000 0.00 0.00 0.00 3.79
28 29 0.033504 GATAATCGGGAGCAGGCGAA 59.966 55.000 0.00 0.00 0.00 4.70
29 30 1.666011 GATAATCGGGAGCAGGCGA 59.334 57.895 0.00 0.00 0.00 5.54
30 31 1.374758 GGATAATCGGGAGCAGGCG 60.375 63.158 0.00 0.00 0.00 5.52
31 32 0.036858 GAGGATAATCGGGAGCAGGC 60.037 60.000 0.00 0.00 0.00 4.85
32 33 0.244994 CGAGGATAATCGGGAGCAGG 59.755 60.000 0.00 0.00 39.04 4.85
33 34 0.389166 GCGAGGATAATCGGGAGCAG 60.389 60.000 0.00 0.00 42.94 4.24
34 35 1.666011 GCGAGGATAATCGGGAGCA 59.334 57.895 0.00 0.00 42.94 4.26
35 36 1.079750 GGCGAGGATAATCGGGAGC 60.080 63.158 0.00 0.00 42.94 4.70
36 37 0.528470 GAGGCGAGGATAATCGGGAG 59.472 60.000 0.00 0.00 42.94 4.30
37 38 0.898789 GGAGGCGAGGATAATCGGGA 60.899 60.000 0.00 0.00 42.94 5.14
38 39 1.592223 GGAGGCGAGGATAATCGGG 59.408 63.158 0.00 0.00 42.94 5.14
39 40 1.592223 GGGAGGCGAGGATAATCGG 59.408 63.158 0.00 0.00 42.94 4.18
40 41 0.900647 AGGGGAGGCGAGGATAATCG 60.901 60.000 0.00 0.00 45.48 3.34
41 42 2.104170 CTAGGGGAGGCGAGGATAATC 58.896 57.143 0.00 0.00 0.00 1.75
42 43 1.897647 GCTAGGGGAGGCGAGGATAAT 60.898 57.143 0.00 0.00 0.00 1.28
43 44 0.542232 GCTAGGGGAGGCGAGGATAA 60.542 60.000 0.00 0.00 0.00 1.75
44 45 1.076906 GCTAGGGGAGGCGAGGATA 59.923 63.158 0.00 0.00 0.00 2.59
45 46 2.203714 GCTAGGGGAGGCGAGGAT 60.204 66.667 0.00 0.00 0.00 3.24
46 47 3.751018 TGCTAGGGGAGGCGAGGA 61.751 66.667 0.00 0.00 0.00 3.71
47 48 3.541713 GTGCTAGGGGAGGCGAGG 61.542 72.222 0.00 0.00 0.00 4.63
48 49 3.541713 GGTGCTAGGGGAGGCGAG 61.542 72.222 0.00 0.00 0.00 5.03
49 50 4.075793 AGGTGCTAGGGGAGGCGA 62.076 66.667 0.00 0.00 0.00 5.54
50 51 3.541713 GAGGTGCTAGGGGAGGCG 61.542 72.222 0.00 0.00 0.00 5.52
51 52 2.041405 AGAGGTGCTAGGGGAGGC 60.041 66.667 0.00 0.00 0.00 4.70
52 53 3.962557 CAGAGGTGCTAGGGGAGG 58.037 66.667 0.00 0.00 0.00 4.30
71 72 4.933064 GATGGGAGGCGCTCGTCG 62.933 72.222 7.64 0.00 42.12 5.12
72 73 4.933064 CGATGGGAGGCGCTCGTC 62.933 72.222 7.64 0.00 0.00 4.20
100 101 2.280457 GGATGGGTAGCTGCGAGC 60.280 66.667 3.24 3.24 42.84 5.03
101 102 1.365633 GAGGATGGGTAGCTGCGAG 59.634 63.158 0.00 0.00 0.00 5.03
102 103 2.134287 GGAGGATGGGTAGCTGCGA 61.134 63.158 0.00 0.00 0.00 5.10
103 104 2.423446 GGAGGATGGGTAGCTGCG 59.577 66.667 0.00 0.00 0.00 5.18
104 105 2.423446 CGGAGGATGGGTAGCTGC 59.577 66.667 0.00 0.00 0.00 5.25
121 122 2.240162 CTAGAGAACGTGGGGTGCCC 62.240 65.000 0.00 0.00 45.71 5.36
122 123 1.218316 CTAGAGAACGTGGGGTGCC 59.782 63.158 0.00 0.00 0.00 5.01
123 124 1.448013 GCTAGAGAACGTGGGGTGC 60.448 63.158 0.00 0.00 0.00 5.01
124 125 1.218316 GGCTAGAGAACGTGGGGTG 59.782 63.158 0.00 0.00 0.00 4.61
125 126 1.229082 TGGCTAGAGAACGTGGGGT 60.229 57.895 0.00 0.00 0.00 4.95
126 127 1.218316 GTGGCTAGAGAACGTGGGG 59.782 63.158 0.00 0.00 0.00 4.96
127 128 1.218316 GGTGGCTAGAGAACGTGGG 59.782 63.158 0.00 0.00 0.00 4.61
128 129 0.173708 GAGGTGGCTAGAGAACGTGG 59.826 60.000 0.00 0.00 0.00 4.94
129 130 0.888619 TGAGGTGGCTAGAGAACGTG 59.111 55.000 0.00 0.00 0.00 4.49
130 131 1.178276 CTGAGGTGGCTAGAGAACGT 58.822 55.000 0.00 0.00 0.00 3.99
131 132 0.457851 CCTGAGGTGGCTAGAGAACG 59.542 60.000 0.00 0.00 0.00 3.95
147 148 0.252479 AGAGAAGCATCAGTGGCCTG 59.748 55.000 3.32 0.00 40.25 4.85
148 149 0.540923 GAGAGAAGCATCAGTGGCCT 59.459 55.000 3.32 0.00 0.00 5.19
149 150 0.463474 GGAGAGAAGCATCAGTGGCC 60.463 60.000 0.00 0.00 0.00 5.36
150 151 0.463474 GGGAGAGAAGCATCAGTGGC 60.463 60.000 0.00 0.00 0.00 5.01
151 152 0.179089 CGGGAGAGAAGCATCAGTGG 60.179 60.000 0.00 0.00 0.00 4.00
152 153 0.809241 GCGGGAGAGAAGCATCAGTG 60.809 60.000 0.00 0.00 0.00 3.66
153 154 1.260538 TGCGGGAGAGAAGCATCAGT 61.261 55.000 0.00 0.00 35.81 3.41
154 155 0.809241 GTGCGGGAGAGAAGCATCAG 60.809 60.000 0.00 0.00 43.17 2.90
155 156 1.219124 GTGCGGGAGAGAAGCATCA 59.781 57.895 0.00 0.00 43.17 3.07
156 157 1.522580 GGTGCGGGAGAGAAGCATC 60.523 63.158 0.00 0.00 43.17 3.91
157 158 2.586792 GGTGCGGGAGAGAAGCAT 59.413 61.111 0.00 0.00 43.17 3.79
158 159 3.706373 GGGTGCGGGAGAGAAGCA 61.706 66.667 0.00 0.00 38.71 3.91
159 160 3.378399 GAGGGTGCGGGAGAGAAGC 62.378 68.421 0.00 0.00 0.00 3.86
160 161 2.896443 GAGGGTGCGGGAGAGAAG 59.104 66.667 0.00 0.00 0.00 2.85
161 162 3.068691 CGAGGGTGCGGGAGAGAA 61.069 66.667 0.00 0.00 0.00 2.87
171 172 4.473520 ATCGGGCTTGCGAGGGTG 62.474 66.667 2.37 0.00 0.00 4.61
172 173 4.162690 GATCGGGCTTGCGAGGGT 62.163 66.667 2.37 0.00 0.00 4.34
173 174 3.391665 AAGATCGGGCTTGCGAGGG 62.392 63.158 2.37 0.00 0.00 4.30
174 175 2.176273 CAAGATCGGGCTTGCGAGG 61.176 63.158 2.37 0.00 38.85 4.63
175 176 3.403277 CAAGATCGGGCTTGCGAG 58.597 61.111 0.00 0.00 38.85 5.03
179 180 2.768492 GGCTGCAAGATCGGGCTTG 61.768 63.158 11.95 12.06 46.18 4.01
180 181 2.439156 GGCTGCAAGATCGGGCTT 60.439 61.111 11.95 0.00 34.07 4.35
181 182 3.720601 TGGCTGCAAGATCGGGCT 61.721 61.111 11.95 0.00 38.56 5.19
182 183 3.512516 GTGGCTGCAAGATCGGGC 61.513 66.667 0.50 4.88 34.07 6.13
183 184 1.817099 GAGTGGCTGCAAGATCGGG 60.817 63.158 0.50 0.00 34.07 5.14
184 185 2.169789 CGAGTGGCTGCAAGATCGG 61.170 63.158 0.50 0.00 34.07 4.18
185 186 1.153765 TCGAGTGGCTGCAAGATCG 60.154 57.895 0.50 3.51 34.07 3.69
186 187 0.108424 AGTCGAGTGGCTGCAAGATC 60.108 55.000 0.50 0.00 34.07 2.75
187 188 0.390866 CAGTCGAGTGGCTGCAAGAT 60.391 55.000 12.66 0.00 34.07 2.40
188 189 1.005748 CAGTCGAGTGGCTGCAAGA 60.006 57.895 12.66 0.00 34.07 3.02
189 190 3.559024 CAGTCGAGTGGCTGCAAG 58.441 61.111 12.66 0.00 0.00 4.01
193 194 4.767255 GGGGCAGTCGAGTGGCTG 62.767 72.222 36.43 19.24 42.56 4.85
195 196 4.329545 TTGGGGCAGTCGAGTGGC 62.330 66.667 32.56 32.56 42.23 5.01
196 197 2.358737 GTTGGGGCAGTCGAGTGG 60.359 66.667 21.39 4.05 0.00 4.00
197 198 2.738521 CGTTGGGGCAGTCGAGTG 60.739 66.667 16.15 16.15 0.00 3.51
198 199 4.681978 GCGTTGGGGCAGTCGAGT 62.682 66.667 0.00 0.00 0.00 4.18
207 208 3.093835 TATGGGAGGGCGTTGGGG 61.094 66.667 0.00 0.00 0.00 4.96
208 209 1.994885 ATGTATGGGAGGGCGTTGGG 61.995 60.000 0.00 0.00 0.00 4.12
209 210 0.535102 GATGTATGGGAGGGCGTTGG 60.535 60.000 0.00 0.00 0.00 3.77
210 211 0.880278 CGATGTATGGGAGGGCGTTG 60.880 60.000 0.00 0.00 0.00 4.10
211 212 1.445942 CGATGTATGGGAGGGCGTT 59.554 57.895 0.00 0.00 0.00 4.84
212 213 3.138625 CGATGTATGGGAGGGCGT 58.861 61.111 0.00 0.00 0.00 5.68
213 214 2.357517 GCGATGTATGGGAGGGCG 60.358 66.667 0.00 0.00 0.00 6.13
214 215 2.032681 GGCGATGTATGGGAGGGC 59.967 66.667 0.00 0.00 0.00 5.19
215 216 0.036010 GATGGCGATGTATGGGAGGG 60.036 60.000 0.00 0.00 0.00 4.30
216 217 0.390340 CGATGGCGATGTATGGGAGG 60.390 60.000 0.00 0.00 40.82 4.30
217 218 0.318441 ACGATGGCGATGTATGGGAG 59.682 55.000 0.00 0.00 41.64 4.30
218 219 0.033366 CACGATGGCGATGTATGGGA 59.967 55.000 0.00 0.00 41.64 4.37
219 220 0.249868 ACACGATGGCGATGTATGGG 60.250 55.000 0.00 0.00 41.64 4.00
220 221 1.139989 GACACGATGGCGATGTATGG 58.860 55.000 0.00 0.00 41.64 2.74
221 222 2.140065 AGACACGATGGCGATGTATG 57.860 50.000 0.00 0.00 41.64 2.39
222 223 2.866156 CAAAGACACGATGGCGATGTAT 59.134 45.455 0.00 0.00 41.64 2.29
223 224 2.267426 CAAAGACACGATGGCGATGTA 58.733 47.619 0.00 0.00 41.64 2.29
224 225 1.078709 CAAAGACACGATGGCGATGT 58.921 50.000 0.00 0.00 41.64 3.06
225 226 1.078709 ACAAAGACACGATGGCGATG 58.921 50.000 0.00 0.00 41.64 3.84
226 227 1.078709 CACAAAGACACGATGGCGAT 58.921 50.000 0.00 0.00 41.64 4.58
227 228 1.565156 GCACAAAGACACGATGGCGA 61.565 55.000 0.00 0.00 41.64 5.54
228 229 1.154413 GCACAAAGACACGATGGCG 60.154 57.895 0.00 0.00 44.79 5.69
229 230 1.154413 CGCACAAAGACACGATGGC 60.154 57.895 0.00 0.00 0.00 4.40
230 231 1.154413 GCGCACAAAGACACGATGG 60.154 57.895 0.30 0.00 0.00 3.51
231 232 1.507713 CGCGCACAAAGACACGATG 60.508 57.895 8.75 0.00 0.00 3.84
232 233 2.667318 CCGCGCACAAAGACACGAT 61.667 57.895 8.75 0.00 0.00 3.73
233 234 3.334751 CCGCGCACAAAGACACGA 61.335 61.111 8.75 0.00 0.00 4.35
234 235 4.368808 CCCGCGCACAAAGACACG 62.369 66.667 8.75 0.00 0.00 4.49
235 236 4.683334 GCCCGCGCACAAAGACAC 62.683 66.667 8.75 0.00 34.03 3.67
253 254 0.519792 CTAACTAAAAACGCGCCGGC 60.520 55.000 19.07 19.07 0.00 6.13
254 255 0.519792 GCTAACTAAAAACGCGCCGG 60.520 55.000 5.73 0.00 0.00 6.13
255 256 0.519792 GGCTAACTAAAAACGCGCCG 60.520 55.000 5.73 0.00 0.00 6.46
256 257 0.800631 AGGCTAACTAAAAACGCGCC 59.199 50.000 5.73 0.00 36.36 6.53
257 258 3.727780 TTAGGCTAACTAAAAACGCGC 57.272 42.857 5.73 0.00 38.68 6.86
258 259 4.260497 GGGATTAGGCTAACTAAAAACGCG 60.260 45.833 9.55 3.53 44.39 6.01
259 260 4.260497 CGGGATTAGGCTAACTAAAAACGC 60.260 45.833 9.55 3.61 44.39 4.84
260 261 4.271776 CCGGGATTAGGCTAACTAAAAACG 59.728 45.833 9.55 7.55 44.39 3.60
261 262 5.430886 TCCGGGATTAGGCTAACTAAAAAC 58.569 41.667 9.55 0.00 44.39 2.43
262 263 5.697082 TCCGGGATTAGGCTAACTAAAAA 57.303 39.130 9.55 0.00 44.39 1.94
263 264 5.899631 ATCCGGGATTAGGCTAACTAAAA 57.100 39.130 9.55 0.00 44.39 1.52
264 265 5.899631 AATCCGGGATTAGGCTAACTAAA 57.100 39.130 20.50 0.00 44.39 1.85
265 266 6.155737 GGATAATCCGGGATTAGGCTAACTAA 59.844 42.308 28.05 9.26 45.24 2.24
266 267 5.659971 GGATAATCCGGGATTAGGCTAACTA 59.340 44.000 28.05 9.91 37.83 2.24
267 268 4.470304 GGATAATCCGGGATTAGGCTAACT 59.530 45.833 28.05 14.07 37.83 2.24
268 269 4.470304 AGGATAATCCGGGATTAGGCTAAC 59.530 45.833 28.05 16.46 42.75 2.34
269 270 4.695606 AGGATAATCCGGGATTAGGCTAA 58.304 43.478 28.05 9.79 42.75 3.09
270 271 4.348020 AGGATAATCCGGGATTAGGCTA 57.652 45.455 28.05 12.49 42.75 3.93
271 272 3.207044 AGGATAATCCGGGATTAGGCT 57.793 47.619 28.05 15.94 42.75 4.58
272 273 5.045797 AGTTTAGGATAATCCGGGATTAGGC 60.046 44.000 28.05 22.43 42.75 3.93
273 274 6.440965 AGAGTTTAGGATAATCCGGGATTAGG 59.559 42.308 28.05 0.00 42.75 2.69
274 275 7.483580 AGAGTTTAGGATAATCCGGGATTAG 57.516 40.000 28.05 0.00 42.75 1.73
275 276 7.867160 AAGAGTTTAGGATAATCCGGGATTA 57.133 36.000 27.00 27.00 42.75 1.75
276 277 6.765355 AAGAGTTTAGGATAATCCGGGATT 57.235 37.500 24.60 24.60 42.75 3.01
277 278 8.450780 AATAAGAGTTTAGGATAATCCGGGAT 57.549 34.615 2.97 2.97 42.75 3.85
278 279 7.867160 AATAAGAGTTTAGGATAATCCGGGA 57.133 36.000 0.00 0.00 42.75 5.14
279 280 8.813951 ACTAATAAGAGTTTAGGATAATCCGGG 58.186 37.037 0.00 0.00 42.75 5.73
306 307 9.944376 AGCTTCTGTAAAATGAGTGTAATTAGA 57.056 29.630 0.00 0.00 0.00 2.10
307 308 9.979270 CAGCTTCTGTAAAATGAGTGTAATTAG 57.021 33.333 0.00 0.00 0.00 1.73
308 309 9.719355 TCAGCTTCTGTAAAATGAGTGTAATTA 57.281 29.630 0.00 0.00 32.61 1.40
309 310 8.507249 GTCAGCTTCTGTAAAATGAGTGTAATT 58.493 33.333 0.00 0.00 32.61 1.40
310 311 7.119846 GGTCAGCTTCTGTAAAATGAGTGTAAT 59.880 37.037 0.00 0.00 32.61 1.89
311 312 6.426937 GGTCAGCTTCTGTAAAATGAGTGTAA 59.573 38.462 0.00 0.00 32.61 2.41
312 313 5.932303 GGTCAGCTTCTGTAAAATGAGTGTA 59.068 40.000 0.00 0.00 32.61 2.90
313 314 4.757149 GGTCAGCTTCTGTAAAATGAGTGT 59.243 41.667 0.00 0.00 32.61 3.55
314 315 4.756642 TGGTCAGCTTCTGTAAAATGAGTG 59.243 41.667 0.00 0.00 32.61 3.51
315 316 4.973168 TGGTCAGCTTCTGTAAAATGAGT 58.027 39.130 0.00 0.00 32.61 3.41
316 317 5.947228 TTGGTCAGCTTCTGTAAAATGAG 57.053 39.130 0.00 0.00 32.61 2.90
317 318 5.183713 CCATTGGTCAGCTTCTGTAAAATGA 59.816 40.000 13.87 0.00 32.72 2.57
318 319 5.404946 CCATTGGTCAGCTTCTGTAAAATG 58.595 41.667 0.00 0.00 32.61 2.32
319 320 4.463891 CCCATTGGTCAGCTTCTGTAAAAT 59.536 41.667 1.20 0.00 32.61 1.82
320 321 3.826157 CCCATTGGTCAGCTTCTGTAAAA 59.174 43.478 1.20 0.00 32.61 1.52
321 322 3.181434 ACCCATTGGTCAGCTTCTGTAAA 60.181 43.478 1.20 0.00 43.06 2.01
322 323 2.375174 ACCCATTGGTCAGCTTCTGTAA 59.625 45.455 1.20 0.00 43.06 2.41
323 324 1.985159 ACCCATTGGTCAGCTTCTGTA 59.015 47.619 1.20 0.00 43.06 2.74
324 325 0.773644 ACCCATTGGTCAGCTTCTGT 59.226 50.000 1.20 0.00 43.06 3.41
325 326 3.658398 ACCCATTGGTCAGCTTCTG 57.342 52.632 1.20 0.00 43.06 3.02
341 342 3.631250 TGATTTATTTGAGGGCTGGACC 58.369 45.455 0.00 0.00 37.93 4.46
342 343 4.273318 ACTGATTTATTTGAGGGCTGGAC 58.727 43.478 0.00 0.00 0.00 4.02
343 344 4.591321 ACTGATTTATTTGAGGGCTGGA 57.409 40.909 0.00 0.00 0.00 3.86
344 345 6.773976 TTTACTGATTTATTTGAGGGCTGG 57.226 37.500 0.00 0.00 0.00 4.85
369 370 9.878599 CATTGTTCTACTATTTTCTGAAACGTT 57.121 29.630 1.58 0.00 0.00 3.99
370 371 9.268268 TCATTGTTCTACTATTTTCTGAAACGT 57.732 29.630 1.58 3.65 0.00 3.99
371 372 9.530129 GTCATTGTTCTACTATTTTCTGAAACG 57.470 33.333 1.58 0.00 0.00 3.60
372 373 9.827411 GGTCATTGTTCTACTATTTTCTGAAAC 57.173 33.333 1.58 0.00 0.00 2.78
373 374 8.717821 CGGTCATTGTTCTACTATTTTCTGAAA 58.282 33.333 0.00 0.00 0.00 2.69
374 375 7.333423 CCGGTCATTGTTCTACTATTTTCTGAA 59.667 37.037 0.00 0.00 0.00 3.02
375 376 6.816640 CCGGTCATTGTTCTACTATTTTCTGA 59.183 38.462 0.00 0.00 0.00 3.27
376 377 6.594159 ACCGGTCATTGTTCTACTATTTTCTG 59.406 38.462 0.00 0.00 0.00 3.02
377 378 6.708285 ACCGGTCATTGTTCTACTATTTTCT 58.292 36.000 0.00 0.00 0.00 2.52
378 379 6.036844 GGACCGGTCATTGTTCTACTATTTTC 59.963 42.308 34.40 7.93 0.00 2.29
379 380 5.878669 GGACCGGTCATTGTTCTACTATTTT 59.121 40.000 34.40 0.00 0.00 1.82
380 381 5.046159 TGGACCGGTCATTGTTCTACTATTT 60.046 40.000 34.40 0.00 0.00 1.40
381 382 4.468510 TGGACCGGTCATTGTTCTACTATT 59.531 41.667 34.40 0.00 0.00 1.73
382 383 4.028131 TGGACCGGTCATTGTTCTACTAT 58.972 43.478 34.40 0.00 0.00 2.12
383 384 3.433343 TGGACCGGTCATTGTTCTACTA 58.567 45.455 34.40 0.27 0.00 1.82
384 385 2.253610 TGGACCGGTCATTGTTCTACT 58.746 47.619 34.40 0.00 0.00 2.57
385 386 2.754946 TGGACCGGTCATTGTTCTAC 57.245 50.000 34.40 15.06 0.00 2.59
386 387 4.899457 AGATATGGACCGGTCATTGTTCTA 59.101 41.667 34.40 14.80 0.00 2.10
387 388 3.711704 AGATATGGACCGGTCATTGTTCT 59.288 43.478 34.40 23.92 0.00 3.01
388 389 4.073293 AGATATGGACCGGTCATTGTTC 57.927 45.455 34.40 22.29 0.00 3.18
389 390 4.654262 ACTAGATATGGACCGGTCATTGTT 59.346 41.667 34.40 17.46 0.00 2.83
390 391 4.223953 ACTAGATATGGACCGGTCATTGT 58.776 43.478 34.40 19.44 0.00 2.71
391 392 4.873746 ACTAGATATGGACCGGTCATTG 57.126 45.455 34.40 16.88 0.00 2.82
392 393 5.888982 AAACTAGATATGGACCGGTCATT 57.111 39.130 34.40 22.89 0.00 2.57
393 394 6.989155 TTAAACTAGATATGGACCGGTCAT 57.011 37.500 34.40 25.64 0.00 3.06
394 395 6.989155 ATTAAACTAGATATGGACCGGTCA 57.011 37.500 34.40 21.15 0.00 4.02
395 396 8.672823 AAAATTAAACTAGATATGGACCGGTC 57.327 34.615 27.04 27.04 0.00 4.79
415 416 9.415008 GGGCCCCAATTAATACAAATTAAAATT 57.585 29.630 12.23 0.00 40.16 1.82
416 417 8.560903 TGGGCCCCAATTAATACAAATTAAAAT 58.439 29.630 22.27 0.00 40.16 1.82
417 418 7.829706 GTGGGCCCCAATTAATACAAATTAAAA 59.170 33.333 22.27 0.00 40.16 1.52
418 419 7.037586 TGTGGGCCCCAATTAATACAAATTAAA 60.038 33.333 22.27 0.00 40.16 1.52
419 420 6.443849 TGTGGGCCCCAATTAATACAAATTAA 59.556 34.615 22.27 0.00 40.83 1.40
420 421 5.964477 TGTGGGCCCCAATTAATACAAATTA 59.036 36.000 22.27 0.00 34.18 1.40
421 422 4.785376 TGTGGGCCCCAATTAATACAAATT 59.215 37.500 22.27 0.00 34.18 1.82
422 423 4.366267 TGTGGGCCCCAATTAATACAAAT 58.634 39.130 22.27 0.00 34.18 2.32
423 424 3.791320 TGTGGGCCCCAATTAATACAAA 58.209 40.909 22.27 0.00 34.18 2.83
424 425 3.474798 TGTGGGCCCCAATTAATACAA 57.525 42.857 22.27 0.00 34.18 2.41
425 426 3.303938 CATGTGGGCCCCAATTAATACA 58.696 45.455 22.27 14.98 34.18 2.29
426 427 3.304829 ACATGTGGGCCCCAATTAATAC 58.695 45.455 22.27 8.70 34.18 1.89
427 428 3.697190 ACATGTGGGCCCCAATTAATA 57.303 42.857 22.27 0.00 34.18 0.98
428 429 2.566708 ACATGTGGGCCCCAATTAAT 57.433 45.000 22.27 0.25 34.18 1.40
429 430 3.245803 ACTTACATGTGGGCCCCAATTAA 60.246 43.478 22.27 15.60 34.18 1.40
430 431 2.313342 ACTTACATGTGGGCCCCAATTA 59.687 45.455 22.27 9.38 34.18 1.40
431 432 1.078656 ACTTACATGTGGGCCCCAATT 59.921 47.619 22.27 10.35 34.18 2.32
432 433 0.709992 ACTTACATGTGGGCCCCAAT 59.290 50.000 22.27 10.30 34.18 3.16
433 434 0.251564 CACTTACATGTGGGCCCCAA 60.252 55.000 22.27 7.85 34.18 4.12
434 435 1.136961 TCACTTACATGTGGGCCCCA 61.137 55.000 22.27 17.75 38.40 4.96
435 436 0.679960 GTCACTTACATGTGGGCCCC 60.680 60.000 22.27 11.72 38.40 5.80
436 437 0.037590 TGTCACTTACATGTGGGCCC 59.962 55.000 17.59 17.59 38.40 5.80
437 438 1.165270 GTGTCACTTACATGTGGGCC 58.835 55.000 9.11 0.00 41.10 5.80
438 439 1.890876 TGTGTCACTTACATGTGGGC 58.109 50.000 9.11 0.00 41.10 5.36
444 445 2.573462 AGCCTCCATGTGTCACTTACAT 59.427 45.455 4.27 0.00 41.10 2.29
445 446 1.977854 AGCCTCCATGTGTCACTTACA 59.022 47.619 4.27 0.00 35.06 2.41
446 447 2.350522 CAGCCTCCATGTGTCACTTAC 58.649 52.381 4.27 0.00 0.00 2.34
447 448 1.278985 CCAGCCTCCATGTGTCACTTA 59.721 52.381 4.27 0.00 0.00 2.24
448 449 0.037303 CCAGCCTCCATGTGTCACTT 59.963 55.000 4.27 0.00 0.00 3.16
449 450 1.681666 CCAGCCTCCATGTGTCACT 59.318 57.895 4.27 0.00 0.00 3.41
450 451 1.377725 CCCAGCCTCCATGTGTCAC 60.378 63.158 0.00 0.00 0.00 3.67
451 452 3.080641 CCCAGCCTCCATGTGTCA 58.919 61.111 0.00 0.00 0.00 3.58
452 453 2.439156 GCCCAGCCTCCATGTGTC 60.439 66.667 0.00 0.00 0.00 3.67
453 454 2.370459 TTTGCCCAGCCTCCATGTGT 62.370 55.000 0.00 0.00 0.00 3.72
454 455 1.186917 TTTTGCCCAGCCTCCATGTG 61.187 55.000 0.00 0.00 0.00 3.21
455 456 0.252375 ATTTTGCCCAGCCTCCATGT 60.252 50.000 0.00 0.00 0.00 3.21
456 457 0.177141 CATTTTGCCCAGCCTCCATG 59.823 55.000 0.00 0.00 0.00 3.66
457 458 1.619807 GCATTTTGCCCAGCCTCCAT 61.620 55.000 0.00 0.00 37.42 3.41
458 459 2.285024 GCATTTTGCCCAGCCTCCA 61.285 57.895 0.00 0.00 37.42 3.86
459 460 2.580815 GCATTTTGCCCAGCCTCC 59.419 61.111 0.00 0.00 37.42 4.30
468 469 2.349590 GACATTTCCTGGGCATTTTGC 58.650 47.619 0.00 0.00 44.08 3.68
469 470 2.674747 CGGACATTTCCTGGGCATTTTG 60.675 50.000 0.00 0.00 40.23 2.44
470 471 1.550072 CGGACATTTCCTGGGCATTTT 59.450 47.619 0.00 0.00 40.23 1.82
471 472 1.185315 CGGACATTTCCTGGGCATTT 58.815 50.000 0.00 0.00 40.23 2.32
472 473 0.684153 CCGGACATTTCCTGGGCATT 60.684 55.000 0.00 0.00 40.23 3.56
473 474 1.076777 CCGGACATTTCCTGGGCAT 60.077 57.895 0.00 0.00 40.23 4.40
474 475 1.202099 TACCGGACATTTCCTGGGCA 61.202 55.000 9.46 0.00 40.23 5.36
475 476 0.463833 CTACCGGACATTTCCTGGGC 60.464 60.000 9.46 0.00 40.23 5.36
476 477 1.200519 TCTACCGGACATTTCCTGGG 58.799 55.000 9.46 2.82 40.23 4.45
477 478 2.485479 CCATCTACCGGACATTTCCTGG 60.485 54.545 9.46 7.09 40.23 4.45
478 479 2.170607 ACCATCTACCGGACATTTCCTG 59.829 50.000 9.46 0.00 40.23 3.86
479 480 2.478292 ACCATCTACCGGACATTTCCT 58.522 47.619 9.46 0.00 40.23 3.36
480 481 3.277142 AACCATCTACCGGACATTTCC 57.723 47.619 9.46 0.00 38.77 3.13
481 482 5.296035 CCTTTAACCATCTACCGGACATTTC 59.704 44.000 9.46 0.00 0.00 2.17
482 483 5.190677 CCTTTAACCATCTACCGGACATTT 58.809 41.667 9.46 0.00 0.00 2.32
483 484 4.777463 CCTTTAACCATCTACCGGACATT 58.223 43.478 9.46 0.00 0.00 2.71
484 485 3.433173 GCCTTTAACCATCTACCGGACAT 60.433 47.826 9.46 0.00 0.00 3.06
485 486 2.093341 GCCTTTAACCATCTACCGGACA 60.093 50.000 9.46 0.00 0.00 4.02
486 487 2.558378 GCCTTTAACCATCTACCGGAC 58.442 52.381 9.46 0.00 0.00 4.79
487 488 1.487558 GGCCTTTAACCATCTACCGGA 59.512 52.381 9.46 0.00 0.00 5.14
488 489 1.489230 AGGCCTTTAACCATCTACCGG 59.511 52.381 0.00 0.00 0.00 5.28
489 490 3.277142 AAGGCCTTTAACCATCTACCG 57.723 47.619 13.78 0.00 0.00 4.02
490 491 3.130516 GCAAAGGCCTTTAACCATCTACC 59.869 47.826 29.94 5.39 0.00 3.18
491 492 3.761752 TGCAAAGGCCTTTAACCATCTAC 59.238 43.478 29.94 11.30 40.13 2.59
492 493 3.761752 GTGCAAAGGCCTTTAACCATCTA 59.238 43.478 29.94 6.83 40.13 1.98
493 494 2.562738 GTGCAAAGGCCTTTAACCATCT 59.437 45.455 29.94 2.94 40.13 2.90
494 495 2.671070 CGTGCAAAGGCCTTTAACCATC 60.671 50.000 29.94 17.74 40.13 3.51
495 496 1.272212 CGTGCAAAGGCCTTTAACCAT 59.728 47.619 29.94 4.64 40.13 3.55
496 497 0.671251 CGTGCAAAGGCCTTTAACCA 59.329 50.000 29.94 22.33 40.13 3.67
497 498 0.038618 CCGTGCAAAGGCCTTTAACC 60.039 55.000 29.94 20.19 40.13 2.85
498 499 0.955905 TCCGTGCAAAGGCCTTTAAC 59.044 50.000 29.94 26.39 40.13 2.01
499 500 1.543802 CATCCGTGCAAAGGCCTTTAA 59.456 47.619 29.94 18.42 40.13 1.52
500 501 1.173043 CATCCGTGCAAAGGCCTTTA 58.827 50.000 29.94 13.65 40.13 1.85
501 502 1.535204 CCATCCGTGCAAAGGCCTTT 61.535 55.000 25.47 25.47 40.13 3.11
502 503 1.978617 CCATCCGTGCAAAGGCCTT 60.979 57.895 13.78 13.78 40.13 4.35
503 504 2.361610 CCATCCGTGCAAAGGCCT 60.362 61.111 0.00 0.00 40.13 5.19
504 505 1.531739 TTTCCATCCGTGCAAAGGCC 61.532 55.000 0.00 0.00 40.13 5.19
505 506 0.388520 GTTTCCATCCGTGCAAAGGC 60.389 55.000 4.68 0.00 34.48 4.35
506 507 0.109781 CGTTTCCATCCGTGCAAAGG 60.110 55.000 3.20 3.20 36.52 3.11
507 508 0.109781 CCGTTTCCATCCGTGCAAAG 60.110 55.000 0.00 0.00 0.00 2.77
508 509 0.535328 TCCGTTTCCATCCGTGCAAA 60.535 50.000 0.00 0.00 0.00 3.68
509 510 0.535328 TTCCGTTTCCATCCGTGCAA 60.535 50.000 0.00 0.00 0.00 4.08
510 511 1.071642 TTCCGTTTCCATCCGTGCA 59.928 52.632 0.00 0.00 0.00 4.57
511 512 1.231958 TGTTCCGTTTCCATCCGTGC 61.232 55.000 0.00 0.00 0.00 5.34
512 513 0.796312 CTGTTCCGTTTCCATCCGTG 59.204 55.000 0.00 0.00 0.00 4.94
513 514 0.682852 TCTGTTCCGTTTCCATCCGT 59.317 50.000 0.00 0.00 0.00 4.69
514 515 1.732259 CTTCTGTTCCGTTTCCATCCG 59.268 52.381 0.00 0.00 0.00 4.18
515 516 3.003480 CTCTTCTGTTCCGTTTCCATCC 58.997 50.000 0.00 0.00 0.00 3.51
516 517 2.416893 GCTCTTCTGTTCCGTTTCCATC 59.583 50.000 0.00 0.00 0.00 3.51
517 518 2.224523 TGCTCTTCTGTTCCGTTTCCAT 60.225 45.455 0.00 0.00 0.00 3.41
518 519 1.140052 TGCTCTTCTGTTCCGTTTCCA 59.860 47.619 0.00 0.00 0.00 3.53
519 520 1.878953 TGCTCTTCTGTTCCGTTTCC 58.121 50.000 0.00 0.00 0.00 3.13
520 521 4.214332 AGAAATGCTCTTCTGTTCCGTTTC 59.786 41.667 0.70 0.00 34.31 2.78
521 522 4.137543 AGAAATGCTCTTCTGTTCCGTTT 58.862 39.130 0.70 0.00 34.31 3.60
522 523 3.744660 AGAAATGCTCTTCTGTTCCGTT 58.255 40.909 0.70 0.00 34.31 4.44
523 524 3.409026 AGAAATGCTCTTCTGTTCCGT 57.591 42.857 0.70 0.00 34.31 4.69
524 525 6.980978 TCTTATAGAAATGCTCTTCTGTTCCG 59.019 38.462 10.14 0.00 36.34 4.30
525 526 8.900983 ATCTTATAGAAATGCTCTTCTGTTCC 57.099 34.615 10.14 0.00 36.34 3.62
526 527 9.539825 TGATCTTATAGAAATGCTCTTCTGTTC 57.460 33.333 10.14 1.41 36.34 3.18
527 528 9.323985 GTGATCTTATAGAAATGCTCTTCTGTT 57.676 33.333 10.14 2.56 36.34 3.16
528 529 8.703743 AGTGATCTTATAGAAATGCTCTTCTGT 58.296 33.333 10.14 6.90 36.34 3.41
529 530 9.545105 AAGTGATCTTATAGAAATGCTCTTCTG 57.455 33.333 10.14 0.00 33.42 3.02
533 534 9.469807 CGTTAAGTGATCTTATAGAAATGCTCT 57.530 33.333 0.00 0.00 36.25 4.09
534 535 8.704234 CCGTTAAGTGATCTTATAGAAATGCTC 58.296 37.037 0.00 0.00 36.25 4.26
535 536 7.171678 GCCGTTAAGTGATCTTATAGAAATGCT 59.828 37.037 0.00 0.00 36.25 3.79
536 537 7.042051 TGCCGTTAAGTGATCTTATAGAAATGC 60.042 37.037 0.00 0.00 36.25 3.56
537 538 8.365399 TGCCGTTAAGTGATCTTATAGAAATG 57.635 34.615 0.00 0.00 36.25 2.32
538 539 8.421784 TCTGCCGTTAAGTGATCTTATAGAAAT 58.578 33.333 0.00 0.00 36.25 2.17
539 540 7.778083 TCTGCCGTTAAGTGATCTTATAGAAA 58.222 34.615 0.00 0.00 36.25 2.52
540 541 7.342769 TCTGCCGTTAAGTGATCTTATAGAA 57.657 36.000 0.00 0.00 36.25 2.10
541 542 6.016192 CCTCTGCCGTTAAGTGATCTTATAGA 60.016 42.308 0.00 0.00 36.25 1.98
542 543 6.153067 CCTCTGCCGTTAAGTGATCTTATAG 58.847 44.000 0.00 0.00 36.25 1.31
543 544 5.010719 CCCTCTGCCGTTAAGTGATCTTATA 59.989 44.000 0.00 0.00 36.25 0.98
544 545 4.202264 CCCTCTGCCGTTAAGTGATCTTAT 60.202 45.833 0.00 0.00 36.25 1.73
545 546 3.132289 CCCTCTGCCGTTAAGTGATCTTA 59.868 47.826 0.00 0.00 35.36 2.10
546 547 2.093447 CCCTCTGCCGTTAAGTGATCTT 60.093 50.000 0.00 0.00 37.65 2.40
547 548 1.482593 CCCTCTGCCGTTAAGTGATCT 59.517 52.381 0.00 0.00 0.00 2.75
548 549 1.473434 CCCCTCTGCCGTTAAGTGATC 60.473 57.143 0.00 0.00 0.00 2.92
549 550 0.541863 CCCCTCTGCCGTTAAGTGAT 59.458 55.000 0.00 0.00 0.00 3.06
550 551 0.834687 ACCCCTCTGCCGTTAAGTGA 60.835 55.000 0.00 0.00 0.00 3.41
551 552 0.899720 TACCCCTCTGCCGTTAAGTG 59.100 55.000 0.00 0.00 0.00 3.16
552 553 1.648116 TTACCCCTCTGCCGTTAAGT 58.352 50.000 0.00 0.00 0.00 2.24
553 554 2.027469 ACTTTACCCCTCTGCCGTTAAG 60.027 50.000 0.00 0.00 0.00 1.85
554 555 1.980036 ACTTTACCCCTCTGCCGTTAA 59.020 47.619 0.00 0.00 0.00 2.01
555 556 1.648116 ACTTTACCCCTCTGCCGTTA 58.352 50.000 0.00 0.00 0.00 3.18
556 557 0.769247 AACTTTACCCCTCTGCCGTT 59.231 50.000 0.00 0.00 0.00 4.44
557 558 1.648116 TAACTTTACCCCTCTGCCGT 58.352 50.000 0.00 0.00 0.00 5.68
558 559 2.629051 CTTAACTTTACCCCTCTGCCG 58.371 52.381 0.00 0.00 0.00 5.69
559 560 2.290705 TGCTTAACTTTACCCCTCTGCC 60.291 50.000 0.00 0.00 0.00 4.85
560 561 3.067684 TGCTTAACTTTACCCCTCTGC 57.932 47.619 0.00 0.00 0.00 4.26
561 562 3.378427 GCATGCTTAACTTTACCCCTCTG 59.622 47.826 11.37 0.00 0.00 3.35
562 563 3.267031 AGCATGCTTAACTTTACCCCTCT 59.733 43.478 16.30 0.00 0.00 3.69
563 564 3.621558 AGCATGCTTAACTTTACCCCTC 58.378 45.455 16.30 0.00 0.00 4.30
564 565 3.739401 AGCATGCTTAACTTTACCCCT 57.261 42.857 16.30 0.00 0.00 4.79
565 566 3.181500 CGAAGCATGCTTAACTTTACCCC 60.181 47.826 32.02 14.63 36.26 4.95
566 567 3.687698 TCGAAGCATGCTTAACTTTACCC 59.312 43.478 32.02 15.33 36.26 3.69
567 568 4.939509 TCGAAGCATGCTTAACTTTACC 57.060 40.909 32.02 16.03 36.26 2.85
568 569 7.796958 AATTTCGAAGCATGCTTAACTTTAC 57.203 32.000 32.02 16.74 36.26 2.01
569 570 8.181573 CCTAATTTCGAAGCATGCTTAACTTTA 58.818 33.333 32.02 21.75 36.26 1.85
570 571 7.029563 CCTAATTTCGAAGCATGCTTAACTTT 58.970 34.615 32.02 21.80 36.26 2.66
571 572 6.555315 CCTAATTTCGAAGCATGCTTAACTT 58.445 36.000 32.02 23.25 36.26 2.66
572 573 5.449177 GCCTAATTTCGAAGCATGCTTAACT 60.449 40.000 32.02 15.81 36.26 2.24
573 574 4.735338 GCCTAATTTCGAAGCATGCTTAAC 59.265 41.667 32.02 19.59 36.26 2.01
574 575 4.495679 CGCCTAATTTCGAAGCATGCTTAA 60.496 41.667 32.02 22.65 36.26 1.85
575 576 3.002246 CGCCTAATTTCGAAGCATGCTTA 59.998 43.478 32.02 17.61 36.26 3.09
576 577 2.223340 CGCCTAATTTCGAAGCATGCTT 60.223 45.455 32.41 32.41 39.23 3.91
577 578 1.331756 CGCCTAATTTCGAAGCATGCT 59.668 47.619 16.30 16.30 0.00 3.79
578 579 1.064060 ACGCCTAATTTCGAAGCATGC 59.936 47.619 10.51 10.51 0.00 4.06
579 580 4.530094 TTACGCCTAATTTCGAAGCATG 57.470 40.909 0.00 0.00 0.00 4.06
580 581 5.751243 ATTTACGCCTAATTTCGAAGCAT 57.249 34.783 0.00 0.00 0.00 3.79
581 582 5.554822 AATTTACGCCTAATTTCGAAGCA 57.445 34.783 0.00 0.00 0.00 3.91
582 583 6.025280 TCAAATTTACGCCTAATTTCGAAGC 58.975 36.000 0.00 0.00 34.01 3.86
583 584 7.241376 ACTCAAATTTACGCCTAATTTCGAAG 58.759 34.615 0.00 0.00 34.01 3.79
584 585 7.136289 ACTCAAATTTACGCCTAATTTCGAA 57.864 32.000 0.00 0.00 34.01 3.71
585 586 6.730960 ACTCAAATTTACGCCTAATTTCGA 57.269 33.333 0.00 0.00 34.01 3.71
586 587 7.123830 CCTACTCAAATTTACGCCTAATTTCG 58.876 38.462 0.00 0.00 34.01 3.46
587 588 7.908601 CACCTACTCAAATTTACGCCTAATTTC 59.091 37.037 0.00 0.00 34.01 2.17
588 589 7.148137 CCACCTACTCAAATTTACGCCTAATTT 60.148 37.037 0.00 0.00 36.03 1.82
589 590 6.317893 CCACCTACTCAAATTTACGCCTAATT 59.682 38.462 0.00 0.00 0.00 1.40
590 591 5.820947 CCACCTACTCAAATTTACGCCTAAT 59.179 40.000 0.00 0.00 0.00 1.73
591 592 5.180271 CCACCTACTCAAATTTACGCCTAA 58.820 41.667 0.00 0.00 0.00 2.69
592 593 4.223477 ACCACCTACTCAAATTTACGCCTA 59.777 41.667 0.00 0.00 0.00 3.93
593 594 3.008704 ACCACCTACTCAAATTTACGCCT 59.991 43.478 0.00 0.00 0.00 5.52
594 595 3.340928 ACCACCTACTCAAATTTACGCC 58.659 45.455 0.00 0.00 0.00 5.68
595 596 4.435121 CGAACCACCTACTCAAATTTACGC 60.435 45.833 0.00 0.00 0.00 4.42
596 597 4.925054 TCGAACCACCTACTCAAATTTACG 59.075 41.667 0.00 0.00 0.00 3.18
597 598 5.930569 ACTCGAACCACCTACTCAAATTTAC 59.069 40.000 0.00 0.00 0.00 2.01
598 599 6.105397 ACTCGAACCACCTACTCAAATTTA 57.895 37.500 0.00 0.00 0.00 1.40
599 600 4.969484 ACTCGAACCACCTACTCAAATTT 58.031 39.130 0.00 0.00 0.00 1.82
600 601 4.618920 ACTCGAACCACCTACTCAAATT 57.381 40.909 0.00 0.00 0.00 1.82
601 602 4.618920 AACTCGAACCACCTACTCAAAT 57.381 40.909 0.00 0.00 0.00 2.32
602 603 4.021719 CCTAACTCGAACCACCTACTCAAA 60.022 45.833 0.00 0.00 0.00 2.69
603 604 3.508793 CCTAACTCGAACCACCTACTCAA 59.491 47.826 0.00 0.00 0.00 3.02
604 605 3.087031 CCTAACTCGAACCACCTACTCA 58.913 50.000 0.00 0.00 0.00 3.41
605 606 3.087781 ACCTAACTCGAACCACCTACTC 58.912 50.000 0.00 0.00 0.00 2.59
606 607 3.087781 GACCTAACTCGAACCACCTACT 58.912 50.000 0.00 0.00 0.00 2.57
607 608 2.165234 GGACCTAACTCGAACCACCTAC 59.835 54.545 0.00 0.00 0.00 3.18
608 609 2.225091 TGGACCTAACTCGAACCACCTA 60.225 50.000 0.00 0.00 0.00 3.08
609 610 1.264295 GGACCTAACTCGAACCACCT 58.736 55.000 0.00 0.00 0.00 4.00
610 611 0.971386 TGGACCTAACTCGAACCACC 59.029 55.000 0.00 0.00 0.00 4.61
611 612 1.891150 TCTGGACCTAACTCGAACCAC 59.109 52.381 0.00 0.00 0.00 4.16
612 613 2.297698 TCTGGACCTAACTCGAACCA 57.702 50.000 0.00 0.00 0.00 3.67
613 614 3.672767 TTTCTGGACCTAACTCGAACC 57.327 47.619 0.00 0.00 0.00 3.62
614 615 3.371285 GCATTTCTGGACCTAACTCGAAC 59.629 47.826 0.00 0.00 0.00 3.95
615 616 3.007506 TGCATTTCTGGACCTAACTCGAA 59.992 43.478 0.00 0.00 0.00 3.71
616 617 2.565391 TGCATTTCTGGACCTAACTCGA 59.435 45.455 0.00 0.00 0.00 4.04
617 618 2.972625 TGCATTTCTGGACCTAACTCG 58.027 47.619 0.00 0.00 0.00 4.18
618 619 5.415701 TCATTTGCATTTCTGGACCTAACTC 59.584 40.000 0.00 0.00 0.00 3.01
619 620 5.183904 GTCATTTGCATTTCTGGACCTAACT 59.816 40.000 0.00 0.00 0.00 2.24
620 621 5.402398 GTCATTTGCATTTCTGGACCTAAC 58.598 41.667 0.00 0.00 0.00 2.34
621 622 4.462483 GGTCATTTGCATTTCTGGACCTAA 59.538 41.667 11.11 0.00 40.06 2.69
622 623 4.016444 GGTCATTTGCATTTCTGGACCTA 58.984 43.478 11.11 0.00 40.06 3.08
623 624 2.827921 GGTCATTTGCATTTCTGGACCT 59.172 45.455 11.11 0.00 40.06 3.85
624 625 2.094026 GGGTCATTTGCATTTCTGGACC 60.094 50.000 0.00 0.00 41.93 4.46
625 626 2.562298 TGGGTCATTTGCATTTCTGGAC 59.438 45.455 0.00 0.00 0.00 4.02
626 627 2.886913 TGGGTCATTTGCATTTCTGGA 58.113 42.857 0.00 0.00 0.00 3.86
627 628 3.681593 TTGGGTCATTTGCATTTCTGG 57.318 42.857 0.00 0.00 0.00 3.86
628 629 6.211587 TCTATTGGGTCATTTGCATTTCTG 57.788 37.500 0.00 0.00 0.00 3.02
629 630 6.855763 TTCTATTGGGTCATTTGCATTTCT 57.144 33.333 0.00 0.00 0.00 2.52
630 631 7.903995 TTTTCTATTGGGTCATTTGCATTTC 57.096 32.000 0.00 0.00 0.00 2.17
655 656 0.036671 GCCGGCACCACTACTTACTT 60.037 55.000 24.80 0.00 0.00 2.24
671 672 1.084370 TTTGCGTTTGGGTTTTGCCG 61.084 50.000 0.00 0.00 38.44 5.69
678 679 1.343142 GAAGGGAATTTGCGTTTGGGT 59.657 47.619 0.00 0.00 0.00 4.51
684 685 1.534729 GTGGAGAAGGGAATTTGCGT 58.465 50.000 0.00 0.00 0.00 5.24
773 774 0.108804 GCAGAAGCAGGCACGTAGTA 60.109 55.000 0.00 0.00 39.22 1.82
774 775 1.374758 GCAGAAGCAGGCACGTAGT 60.375 57.895 0.00 0.00 41.59 2.73
775 776 3.479370 GCAGAAGCAGGCACGTAG 58.521 61.111 0.00 0.00 41.58 3.51
805 810 5.734855 AGTGTAAAATATAGGCGCTGTTG 57.265 39.130 7.64 0.00 0.00 3.33
806 811 6.183360 GGAAAGTGTAAAATATAGGCGCTGTT 60.183 38.462 7.64 0.00 0.00 3.16
807 812 5.296035 GGAAAGTGTAAAATATAGGCGCTGT 59.704 40.000 7.64 0.00 0.00 4.40
861 869 5.132816 AGGGGACTAGCAGTGCTTTATTATT 59.867 40.000 25.23 0.00 40.44 1.40
862 870 4.660771 AGGGGACTAGCAGTGCTTTATTAT 59.339 41.667 25.23 2.49 40.44 1.28
942 950 2.038690 CTTCGATCGGATTCGGGGA 58.961 57.895 16.41 0.00 39.56 4.81
974 982 1.010797 CGCGCGAGATTTGGATTGG 60.011 57.895 28.94 0.00 0.00 3.16
1145 1153 3.599285 GACGTGCCGGATTCCACCA 62.599 63.158 5.05 0.00 0.00 4.17
1434 1442 0.319986 TGCCGCAGTAATTCACGACA 60.320 50.000 0.00 0.00 0.00 4.35
1485 1493 1.034838 GCATATGGTTGGCCGTGGAA 61.035 55.000 4.56 0.00 37.67 3.53
1542 1550 1.449353 GAGGAAGGCGATGGCAGAT 59.551 57.895 1.01 0.00 42.47 2.90
1782 1953 5.973565 GCCATTTGTGAGATACACTAATTGC 59.026 40.000 13.37 13.37 46.58 3.56
2262 2436 0.321671 TAGCAGACAGTGGAAGGTGC 59.678 55.000 0.00 0.00 0.00 5.01
2273 2447 1.552578 ACATACACCGGTAGCAGACA 58.447 50.000 6.87 0.00 31.88 3.41
2403 2577 4.228824 ACAGGGTAAACTCACTCTAACCA 58.771 43.478 0.00 0.00 0.00 3.67
2621 2797 2.290896 TGCCTAGCCCCATGCATATTAC 60.291 50.000 0.00 0.00 44.83 1.89
2764 2940 2.938451 CTCCGCATGCAGATTTGAGTAA 59.062 45.455 19.57 0.00 0.00 2.24
2816 2992 4.323104 GGCAGAGATAGGTCAGTTTCTTGT 60.323 45.833 0.00 0.00 0.00 3.16
2831 3007 2.844966 CCCATGATGGATAGGCAGAGAT 59.155 50.000 14.26 0.00 40.96 2.75
2846 3023 1.748732 TCCAACTACCAACCCCATGA 58.251 50.000 0.00 0.00 0.00 3.07
2927 3104 2.138596 AAAAGTTGCTGGTGAATGCG 57.861 45.000 0.00 0.00 0.00 4.73
3215 3394 2.693591 CCATCTTCGGCCTCTTACAGTA 59.306 50.000 0.00 0.00 0.00 2.74
3228 3407 0.727398 GCCCTTCGTTTCCATCTTCG 59.273 55.000 0.00 0.00 0.00 3.79
3258 3437 2.549169 CTTCTGCAAGGCCTCCTCCC 62.549 65.000 5.23 0.00 30.89 4.30
3259 3438 1.077858 CTTCTGCAAGGCCTCCTCC 60.078 63.158 5.23 0.00 30.89 4.30
3375 3554 1.167851 GTATGCCAAGCTGTGCAAGA 58.832 50.000 13.70 3.59 41.50 3.02
3377 3556 0.888736 ACGTATGCCAAGCTGTGCAA 60.889 50.000 13.70 2.45 41.50 4.08
3473 3652 2.037251 GCAGATCACTTAGCCCCGATTA 59.963 50.000 0.00 0.00 0.00 1.75
3477 3656 1.227674 GGCAGATCACTTAGCCCCG 60.228 63.158 0.00 0.00 41.25 5.73
3532 3711 4.223923 AGTTGTGAAGCAGCTATTACTCCT 59.776 41.667 0.00 0.00 36.87 3.69
3548 3727 1.016627 GTGTTGCTGCTGAGTTGTGA 58.983 50.000 0.00 0.00 0.00 3.58
3607 3786 4.228438 TGTTCTCTCTCTGATCTGGTAGGA 59.772 45.833 0.00 0.00 0.00 2.94
3643 3822 0.811915 CCTCCTCACTGTGTACCTCG 59.188 60.000 7.79 0.00 0.00 4.63
3651 3838 1.646447 TCCACCTATCCTCCTCACTGT 59.354 52.381 0.00 0.00 0.00 3.55
3706 3893 8.415950 ACATGTCATTTATGTGGAAAAAGGTA 57.584 30.769 0.00 0.00 37.38 3.08
3813 4000 9.167239 CTTAAAACTCCTCGTACAACTATATCG 57.833 37.037 0.00 0.00 0.00 2.92
3910 4099 5.400485 GCACAGTTTGACATCAGACAAAATC 59.600 40.000 5.46 0.00 40.15 2.17
4010 4199 6.533367 GTGCAAAATTTGACCAAGTTTGTAGA 59.467 34.615 10.26 0.00 31.87 2.59
4053 4245 4.151689 TGAAAAGAAGGCATACGACGAAAG 59.848 41.667 0.00 0.00 0.00 2.62
4056 4248 3.306917 TGAAAAGAAGGCATACGACGA 57.693 42.857 0.00 0.00 0.00 4.20
4148 4340 0.308684 CCATGTCGCACCACATATGC 59.691 55.000 1.58 0.00 35.10 3.14
4194 4386 4.987285 ACATGATATCTTGCTCGCTTACTG 59.013 41.667 16.39 0.00 0.00 2.74
4234 4426 1.070957 GGCGGGGTTATCACTAGCC 59.929 63.158 0.00 0.00 34.91 3.93
4426 4618 8.410141 TGAAAAATAGTCACGAGGAAAACAAAT 58.590 29.630 0.00 0.00 0.00 2.32
4429 4621 6.721321 GTGAAAAATAGTCACGAGGAAAACA 58.279 36.000 0.00 0.00 36.35 2.83
4544 4736 1.942657 AGCGTCCGGAATTGAATGATG 59.057 47.619 5.23 0.00 0.00 3.07
4545 4737 2.332063 AGCGTCCGGAATTGAATGAT 57.668 45.000 5.23 0.00 0.00 2.45
5252 5574 2.388735 TGTAGGGCATAGTCTCCAGTG 58.611 52.381 0.00 0.00 0.00 3.66
5267 5589 3.191371 GCACATCAACCCTTTCTTGTAGG 59.809 47.826 0.00 0.00 0.00 3.18
5464 5786 2.613474 GGCCACATAACTACCACACGAA 60.613 50.000 0.00 0.00 0.00 3.85
5481 5803 1.010294 TCCTCTTACCCCATAAGGCCA 59.990 52.381 5.01 0.00 40.78 5.36
5482 5804 1.815757 TCCTCTTACCCCATAAGGCC 58.184 55.000 0.00 0.00 40.78 5.19
6240 6562 6.404708 TCATTCAGAGAGATTCAGTTCTTGG 58.595 40.000 0.00 0.00 0.00 3.61
6437 6764 8.084684 GCAAGAGAAATACCAAAAGAAGACAAT 58.915 33.333 0.00 0.00 0.00 2.71
6442 6769 8.647143 TTTTGCAAGAGAAATACCAAAAGAAG 57.353 30.769 0.00 0.00 31.14 2.85
6479 6806 7.317842 TCTTACGAGGAGTACTCAAATAGTG 57.682 40.000 23.91 9.22 46.98 2.74
6480 6807 8.522542 AATCTTACGAGGAGTACTCAAATAGT 57.477 34.615 23.91 16.26 46.98 2.12
7183 7513 3.404224 TTGGCCTCGTGTACACAATTA 57.596 42.857 24.98 6.95 0.00 1.40
7287 7619 2.103263 GGAACACAACTGTCAGAGTCCT 59.897 50.000 6.91 0.00 31.73 3.85
7544 7899 4.351407 CCAGGTACTCCTACTCCAGAGATA 59.649 50.000 0.70 0.00 43.07 1.98
7558 7916 6.433716 ACAGTAGAAACTAGAACCAGGTACTC 59.566 42.308 0.00 0.00 31.37 2.59
7617 7975 2.748605 CAGAGCAAAGTTCACGAGACT 58.251 47.619 0.00 0.00 0.00 3.24
7618 7976 1.193426 GCAGAGCAAAGTTCACGAGAC 59.807 52.381 0.00 0.00 0.00 3.36
7619 7977 1.069204 AGCAGAGCAAAGTTCACGAGA 59.931 47.619 0.00 0.00 0.00 4.04
7620 7978 1.506493 AGCAGAGCAAAGTTCACGAG 58.494 50.000 0.00 0.00 0.00 4.18
7621 7979 2.035961 ACTAGCAGAGCAAAGTTCACGA 59.964 45.455 0.00 0.00 0.00 4.35
7622 7980 2.408050 ACTAGCAGAGCAAAGTTCACG 58.592 47.619 0.00 0.00 0.00 4.35
7623 7981 3.393800 TGACTAGCAGAGCAAAGTTCAC 58.606 45.455 0.00 0.00 29.56 3.18
7710 8068 1.635663 CGCGTTAAGAAGTGGCCAGG 61.636 60.000 5.11 0.00 0.00 4.45
7769 8133 6.907212 GTGTTCTGATCAACAAACAGTAACAG 59.093 38.462 14.80 0.00 38.01 3.16
7781 8145 4.676196 GCCCATGATTGTGTTCTGATCAAC 60.676 45.833 0.00 0.00 33.89 3.18
8019 8386 3.435275 TGAACACTGCAGATCCTAGAGT 58.565 45.455 23.35 2.61 0.00 3.24
8036 8403 3.606687 ACCGTAAGATTGGACCATGAAC 58.393 45.455 0.00 0.00 43.02 3.18
8138 9129 1.341209 GTTTTGTTCAAGGCCCTCTGG 59.659 52.381 0.00 0.00 0.00 3.86
8166 9157 4.856664 TCTACTCACTCGTTGTTCTGAAC 58.143 43.478 13.49 13.49 0.00 3.18
8238 9232 6.327934 TCATAGCGAGTTTAAAGTGTACTCC 58.672 40.000 0.00 0.00 35.91 3.85
8239 9233 7.807687 TTCATAGCGAGTTTAAAGTGTACTC 57.192 36.000 0.00 0.00 35.95 2.59
8240 9234 8.656849 CAATTCATAGCGAGTTTAAAGTGTACT 58.343 33.333 0.00 0.00 0.00 2.73
8241 9235 7.425595 GCAATTCATAGCGAGTTTAAAGTGTAC 59.574 37.037 0.00 0.00 0.00 2.90
8323 9347 9.896263 GAATTCCTACTAGTAAGGAGTATTTCG 57.104 37.037 16.00 0.00 30.77 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.